View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9025_low_6 (Length: 460)
Name: NF9025_low_6
Description: NF9025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9025_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 12 - 446
Target Start/End: Original strand, 31698537 - 31698969
Alignment:
| Q |
12 |
agcagagataggtttagtaagagagacaaccaattgatattatgctggggtatgaaaaatcataagaattttctttataattttcttatggacataaact |
111 |
Q |
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| T |
31698537 |
agcagagataggtttagtaagagagacaaccaattgatactatgctggggtatgagaaatcataagaattttctttataattttcttatggacataaact |
31698636 |
T |
|
| Q |
112 |
ggatctaactccatatgcttggtctgaacatgtaaaactggactatgagaccatagaaactgcacttggattgttacaaatgttgtttcttgttaactcg |
211 |
Q |
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| T |
31698637 |
ggatctaactctatatgcttggtctgaatatgtaaaactggactatgagaccatagaaactgcacttggattgttacaaatgttgtttcttgttaactcg |
31698736 |
T |
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| Q |
212 |
attataaatctttatgtaaactcgtgtagacttgcataacctgatatggtagtattctggtcatagagatgatgaggtagatggagacatagaagaagtg |
311 |
Q |
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| T |
31698737 |
attataaatctttatgtaaactcgtgtagacttgcataacctgatatggtagtattctggtcatatagatgaagaggtagatggagac--agaagaagtg |
31698834 |
T |
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| Q |
312 |
tgaaataggattggatatggaaaccaatactcatttaacataacatacttaaatgcccagatgcaaccatcttgcaagacatttgcaccctttgtgattg |
411 |
Q |
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| T |
31698835 |
tgaaataggattggatatggaaaccaatactcatttaacataacatccttaaatgcccagatgcaaccatcttgcaagacatttgcaccctttgtgattg |
31698934 |
T |
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| Q |
412 |
tgcgataaaccaaaaaatacactccttggatctga |
446 |
Q |
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| T |
31698935 |
tgtgataaacccaaaaatacactccttggatctga |
31698969 |
T |
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