View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9026_low_16 (Length: 567)

Name: NF9026_low_16
Description: NF9026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9026_low_16
NF9026_low_16
[»] chr5 (45 HSPs)
chr5 (1-537)||(28411402-28411935)
chr5 (11-101)||(1525803-1525893)
chr5 (1-89)||(3442894-3442982)
chr5 (8-101)||(37065635-37065728)
chr5 (4-99)||(33667596-33667691)
chr5 (1-101)||(11002444-11002544)
chr5 (19-101)||(1935281-1935363)
chr5 (1-51)||(1935402-1935452)
chr5 (1-51)||(28976882-28976932)
chr5 (17-98)||(21916042-21916123)
chr5 (1-101)||(16133995-16134094)
chr5 (1-101)||(2713103-2713195)
chr5 (1-51)||(2915519-2915569)
chr5 (1-51)||(12492407-12492457)
chr5 (1-51)||(13561409-13561459)
chr5 (1-51)||(29816591-29816641)
chr5 (1-51)||(30213784-30213834)
chr5 (1-51)||(2075496-2075546)
chr5 (1-51)||(3302053-3302103)
chr5 (1-51)||(4496593-4496643)
chr5 (1-51)||(5558350-5558400)
chr5 (1-47)||(9121101-9121147)
chr5 (5-51)||(10639511-10639557)
chr5 (1-51)||(20456982-20457032)
chr5 (1-51)||(38684689-38684739)
chr5 (1-51)||(38685176-38685226)
chr5 (11-100)||(1174649-1174738)
chr5 (2-51)||(11675739-11675788)
chr5 (1-49)||(408517-408565)
chr5 (1-85)||(15588413-15588497)
chr5 (1-64)||(7640530-7640593)
chr5 (4-51)||(14911381-14911428)
chr5 (5-51)||(418061-418107)
chr5 (1-51)||(1275473-1275523)
chr5 (1-51)||(1287602-1287652)
chr5 (10-92)||(10082777-10082859)
chr5 (1-51)||(15252767-15252817)
chr5 (1-51)||(38132545-38132595)
chr5 (2-55)||(28087-28140)
chr5 (19-60)||(1935359-1935399)
chr5 (2-51)||(6788276-6788325)
chr5 (1-34)||(21952588-21952621)
chr5 (1-46)||(27386554-27386599)
chr5 (1-50)||(32442148-32442197)
chr5 (1-50)||(42272687-42272736)
[»] chr7 (55 HSPs)
chr7 (1-101)||(34745906-34746006)
chr7 (1-101)||(45558489-45558589)
chr7 (10-102)||(5336076-5336168)
chr7 (1-50)||(17759483-17759532)
chr7 (1-90)||(19119447-19119536)
chr7 (1-93)||(25578027-25578119)
chr7 (1-100)||(48735924-48736022)
chr7 (1-51)||(6375077-6375127)
chr7 (1-51)||(11594169-11594219)
chr7 (1-51)||(12841298-12841348)
chr7 (1-51)||(28208351-28208401)
chr7 (1-51)||(31682625-31682675)
chr7 (1-51)||(34035177-34035227)
chr7 (1-51)||(35906224-35906274)
chr7 (1-51)||(36652201-36652251)
chr7 (1-51)||(38607201-38607251)
chr7 (1-51)||(39906395-39906445)
chr7 (1-51)||(40979951-40980001)
chr7 (1-51)||(43281883-43281933)
chr7 (1-51)||(45836505-45836555)
chr7 (6-51)||(22174209-22174254)
chr7 (1-38)||(47155195-47155232)
chr7 (1-48)||(31840442-31840489)
chr7 (1-51)||(2885745-2885795)
chr7 (1-51)||(15682383-15682433)
chr7 (1-51)||(27648989-27649039)
chr7 (1-59)||(27893586-27893644)
chr7 (1-51)||(29650593-29650643)
chr7 (1-51)||(31869125-31869175)
chr7 (1-51)||(35865912-35865962)
chr7 (1-51)||(37618154-37618204)
chr7 (1-51)||(49029485-49029535)
chr7 (1-61)||(14593951-14594011)
chr7 (1-61)||(16013474-16013534)
chr7 (1-101)||(28627956-28628056)
chr7 (1-32)||(6682581-6682612)
chr7 (1-51)||(4604756-4604806)
chr7 (1-51)||(6807700-6807750)
chr7 (5-51)||(19262485-19262531)
chr7 (1-51)||(22349829-22349879)
chr7 (1-51)||(24777170-24777220)
chr7 (1-59)||(30814148-30814206)
chr7 (1-51)||(31681043-31681093)
chr7 (1-51)||(32631773-32631823)
chr7 (1-51)||(34869629-34869679)
chr7 (43-93)||(36514273-36514323)
chr7 (1-51)||(46355879-46355929)
chr7 (3-49)||(47852298-47852344)
chr7 (2-51)||(33103135-33103184)
chr7 (3-69)||(38921111-38921179)
chr7 (1-42)||(40630652-40630693)
chr7 (1-98)||(45601638-45601735)
chr7 (1-33)||(12966243-12966275)
chr7 (1-45)||(28708596-28708640)
chr7 (1-45)||(44855197-44855241)
[»] chr2 (53 HSPs)
chr2 (1-101)||(44437744-44437844)
chr2 (1-101)||(12489825-12489925)
chr2 (1-101)||(42543394-42543494)
chr2 (1-93)||(12470920-12471012)
chr2 (2-93)||(5759019-5759110)
chr2 (3-100)||(4598587-4598684)
chr2 (1-93)||(28960234-28960326)
chr2 (1-49)||(29968634-29968682)
chr2 (1-51)||(227398-227448)
chr2 (1-51)||(451671-451721)
chr2 (1-51)||(2610797-2610847)
chr2 (1-51)||(3635346-3635396)
chr2 (1-51)||(12474950-12475000)
chr2 (1-67)||(19334175-19334241)
chr2 (1-51)||(28508887-28508937)
chr2 (1-51)||(30306241-30306291)
chr2 (1-51)||(38430093-38430143)
chr2 (1-50)||(4807805-4807854)
chr2 (4-93)||(20129627-20129716)
chr2 (1-48)||(17670680-17670727)
chr2 (4-51)||(23997811-23997858)
chr2 (1-64)||(39709224-39709287)
chr2 (1-51)||(3243676-3243726)
chr2 (1-51)||(7326183-7326233)
chr2 (1-51)||(11992131-11992181)
chr2 (1-51)||(12520085-12520135)
chr2 (1-51)||(25834887-25834937)
chr2 (1-51)||(38328393-38328443)
chr2 (2-51)||(19224990-19225039)
chr2 (4-45)||(32541820-32541861)
chr2 (1-98)||(45367648-45367745)
chr2 (1-101)||(8197564-8197664)
chr2 (1-101)||(8202324-8202424)
chr2 (2-33)||(24101779-24101810)
chr2 (1-51)||(624709-624759)
chr2 (1-51)||(3720438-3720488)
chr2 (1-51)||(8180989-8181039)
chr2 (1-51)||(9496075-9496125)
chr2 (1-51)||(9531623-9531673)
chr2 (1-51)||(12734909-12734959)
chr2 (13-51)||(15025703-15025741)
chr2 (1-51)||(17429259-17429309)
chr2 (1-51)||(33504433-33504483)
chr2 (1-59)||(41763066-41763124)
chr2 (1-51)||(42549860-42549910)
chr2 (1-51)||(45543096-45543146)
chr2 (2-51)||(3481363-3481412)
chr2 (2-51)||(3866281-3866330)
chr2 (2-51)||(31959730-31959779)
chr2 (2-51)||(36183660-36183709)
chr2 (4-48)||(9554096-9554140)
chr2 (7-51)||(23915722-23915766)
chr2 (1-49)||(25384680-25384728)
[»] chr8 (40 HSPs)
chr8 (1-101)||(39953287-39953387)
chr8 (1-97)||(30812839-30812935)
chr8 (2-101)||(7531668-7531767)
chr8 (1-101)||(16351537-16351636)
chr8 (8-101)||(38901849-38901942)
chr8 (1-93)||(43733374-43733465)
chr8 (1-91)||(26685942-26686032)
chr8 (1-51)||(36565264-36565314)
chr8 (1-51)||(11523746-11523796)
chr8 (1-51)||(12491161-12491211)
chr8 (1-51)||(14742105-14742155)
chr8 (1-93)||(32043757-32043846)
chr8 (7-51)||(30456323-30456367)
chr8 (1-51)||(490544-490594)
chr8 (1-51)||(2796762-2796812)
chr8 (1-51)||(21121355-21121404)
chr8 (1-51)||(25473426-25473476)
chr8 (1-51)||(36545358-36545408)
chr8 (1-51)||(44529434-44529484)
chr8 (1-50)||(1928610-1928659)
chr8 (1-64)||(35914624-35914687)
chr8 (4-51)||(42469753-42469800)
chr8 (1-51)||(79236-79286)
chr8 (1-51)||(8932912-8932962)
chr8 (1-51)||(18473995-18474045)
chr8 (1-51)||(23492243-23492293)
chr8 (1-51)||(27556325-27556375)
chr8 (1-51)||(32569733-32569783)
chr8 (1-51)||(32931169-32931219)
chr8 (1-51)||(35646953-35647003)
chr8 (1-51)||(42854027-42854077)
chr8 (1-51)||(44047555-44047605)
chr8 (1-51)||(44699675-44699725)
chr8 (1-51)||(45419444-45419494)
chr8 (1-30)||(1335556-1335585)
chr8 (20-93)||(34196567-34196640)
chr8 (1-49)||(22681479-22681527)
chr8 (1-38)||(27449206-27449245)
chr8 (1-49)||(37808220-37808268)
chr8 (4-48)||(39967525-39967569)
[»] chr4 (61 HSPs)
chr4 (2-101)||(42285727-42285826)
chr4 (1-101)||(31961289-31961389)
chr4 (1-101)||(31897451-31897551)
chr4 (2-101)||(46372183-46372282)
chr4 (1-101)||(10209195-10209293)
chr4 (1-92)||(50869903-50869994)
chr4 (1-101)||(17900639-17900739)
chr4 (11-93)||(6318838-6318920)
chr4 (1-87)||(35555673-35555759)
chr4 (1-79)||(13262393-13262471)
chr4 (1-90)||(2589242-2589331)
chr4 (1-50)||(6958261-6958310)
chr4 (4-69)||(44360277-44360342)
chr4 (17-101)||(6478722-6478806)
chr4 (1-85)||(35622699-35622783)
chr4 (1-64)||(32479234-32479297)
chr4 (1-51)||(4441062-4441112)
chr4 (1-51)||(8598964-8599014)
chr4 (1-51)||(27450203-27450253)
chr4 (1-51)||(31959837-31959887)
chr4 (1-51)||(49939757-49939807)
chr4 (1-51)||(52569538-52569588)
chr4 (1-101)||(26037528-26037628)
chr4 (5-69)||(36556787-36556851)
chr4 (4-51)||(39446936-39446983)
chr4 (1-51)||(436438-436488)
chr4 (1-51)||(19061958-19062008)
chr4 (1-51)||(19154886-19154936)
chr4 (1-51)||(19969390-19969440)
chr4 (1-51)||(21237067-21237117)
chr4 (1-51)||(23906320-23906370)
chr4 (1-51)||(29399013-29399063)
chr4 (1-51)||(32633429-32633479)
chr4 (1-51)||(35690480-35690530)
chr4 (1-51)||(40018212-40018262)
chr4 (1-51)||(45209228-45209278)
chr4 (1-51)||(48622566-48622616)
chr4 (1-69)||(5367672-5367741)
chr4 (9-89)||(25257627-25257705)
chr4 (4-51)||(1777043-1777090)
chr4 (4-51)||(29209201-29209248)
chr4 (1-100)||(51550272-51550370)
chr4 (1-48)||(52227918-52227965)
chr4 (1-51)||(6957807-6957857)
chr4 (1-51)||(8286648-8286698)
chr4 (1-51)||(21528497-21528547)
chr4 (1-51)||(37042687-37042737)
chr4 (1-51)||(39708642-39708692)
chr4 (5-51)||(40932951-40932997)
chr4 (1-47)||(49738573-49738619)
chr4 (1-51)||(56375499-56375549)
chr4 (1-93)||(10775494-10775584)
chr4 (1-46)||(21359248-21359293)
chr4 (1-42)||(50238638-50238679)
chr4 (1-42)||(50238724-50238765)
chr4 (4-55)||(1211418-1211470)
chr4 (1-37)||(4136766-4136802)
chr4 (1-45)||(15661895-15661939)
chr4 (5-45)||(18966820-18966860)
chr4 (1-101)||(26024873-26024973)
chr4 (1-101)||(42639043-42639143)
[»] chr1 (64 HSPs)
chr1 (1-101)||(28528514-28528614)
chr1 (5-101)||(40419798-40419893)
chr1 (1-101)||(26016596-26016696)
chr1 (1-101)||(7083049-7083149)
chr1 (1-101)||(52532639-52532739)
chr1 (1-65)||(50806862-50806926)
chr1 (2-69)||(51584935-51585002)
chr1 (1-51)||(1210954-1211004)
chr1 (1-51)||(25979254-25979304)
chr1 (1-51)||(29577461-29577511)
chr1 (1-51)||(30202153-30202203)
chr1 (1-51)||(37311778-37311828)
chr1 (1-51)||(38869091-38869141)
chr1 (1-55)||(39140720-39140774)
chr1 (1-51)||(43240402-43240452)
chr1 (1-51)||(44941799-44941849)
chr1 (1-51)||(49347416-49347466)
chr1 (1-101)||(10272417-10272515)
chr1 (1-101)||(8796368-8796468)
chr1 (1-64)||(28511824-28511887)
chr1 (4-51)||(34792375-34792422)
chr1 (1-51)||(4707244-4707293)
chr1 (1-51)||(13578925-13578975)
chr1 (1-51)||(15437151-15437201)
chr1 (1-51)||(21769734-21769784)
chr1 (1-51)||(28090717-28090767)
chr1 (1-51)||(28533676-28533726)
chr1 (1-51)||(38807694-38807744)
chr1 (1-51)||(41560438-41560488)
chr1 (1-51)||(44751693-44751743)
chr1 (1-51)||(51440788-51440838)
chr1 (1-51)||(52921289-52921339)
chr1 (1-50)||(8203157-8203206)
chr1 (1-85)||(37263532-37263617)
chr1 (1-49)||(37462899-37462947)
chr1 (1-40)||(2001149-2001188)
chr1 (1-56)||(2429652-2429707)
chr1 (4-51)||(9592943-9592990)
chr1 (1-64)||(40568433-40568496)
chr1 (1-51)||(4029331-4029381)
chr1 (1-51)||(4590555-4590605)
chr1 (1-51)||(5113952-5114002)
chr1 (1-51)||(14225859-14225909)
chr1 (1-51)||(15086131-15086181)
chr1 (1-51)||(17269012-17269062)
chr1 (19-101)||(17640108-17640190)
chr1 (1-51)||(22090305-22090355)
chr1 (1-51)||(27704159-27704209)
chr1 (1-51)||(30445314-30445364)
chr1 (1-63)||(32404549-32404611)
chr1 (1-51)||(42337765-42337815)
chr1 (1-51)||(48861398-48861448)
chr1 (1-51)||(49377510-49377560)
chr1 (4-85)||(6641286-6641367)
chr1 (2-51)||(8391981-8392030)
chr1 (1-50)||(38877366-38877415)
chr1 (10-51)||(39318338-39318379)
chr1 (1-46)||(43028831-43028876)
chr1 (2-51)||(50676534-50676583)
chr1 (1-49)||(2544804-2544852)
chr1 (1-89)||(6025776-6025864)
chr1 (1-69)||(14224276-14224343)
chr1 (1-41)||(26299287-26299327)
chr1 (1-65)||(29808051-29808115)
[»] chr6 (22 HSPs)
chr6 (16-97)||(7513427-7513508)
chr6 (1-98)||(10617257-10617354)
chr6 (13-101)||(38922-39018)
chr6 (1-51)||(12890784-12890834)
chr6 (1-51)||(31819040-31819090)
chr6 (1-51)||(33084138-33084188)
chr6 (1-49)||(3206482-3206530)
chr6 (1-97)||(9706933-9707029)
chr6 (1-63)||(8364753-8364815)
chr6 (1-51)||(28085585-28085635)
chr6 (1-51)||(30031465-30031515)
chr6 (1-51)||(32756130-32756180)
chr6 (1-51)||(34934853-34934903)
chr6 (17-89)||(3074502-3074573)
chr6 (11-51)||(10453272-10453312)
chr6 (4-51)||(34143791-34143838)
chr6 (4-51)||(34156407-34156454)
chr6 (1-51)||(34528-34578)
chr6 (1-51)||(21089606-21089656)
chr6 (16-89)||(7080511-7080584)
chr6 (1-45)||(5258171-5258215)
chr6 (3-51)||(31818740-31818788)
[»] chr3 (45 HSPs)
chr3 (1-101)||(27893248-27893348)
chr3 (1-91)||(31454248-31454338)
chr3 (5-69)||(3987525-3987589)
chr3 (379-457)||(52013195-52013273)
chr3 (1-93)||(31452984-31453076)
chr3 (1-89)||(37351578-37351666)
chr3 (1-51)||(311332-311382)
chr3 (1-51)||(5169041-5169091)
chr3 (1-51)||(12096728-12096778)
chr3 (1-51)||(40273228-40273278)
chr3 (1-51)||(47233619-47233669)
chr3 (1-51)||(48508444-48508494)
chr3 (1-51)||(52139009-52139059)
chr3 (1-93)||(26990380-26990471)
chr3 (5-57)||(49042140-49042192)
chr3 (2-101)||(2340741-2340840)
chr3 (4-51)||(7895906-7895953)
chr3 (6-101)||(36304125-36304220)
chr3 (1-51)||(22281-22331)
chr3 (1-51)||(659734-659784)
chr3 (1-51)||(31566184-31566234)
chr3 (1-51)||(38060923-38060973)
chr3 (1-51)||(46148237-46148287)
chr3 (1-51)||(47555355-47555405)
chr3 (1-51)||(51447740-51447790)
chr3 (1-51)||(52156107-52156157)
chr3 (1-51)||(53262350-53262400)
chr3 (1-51)||(53519789-53519839)
chr3 (2-51)||(38850330-38850379)
chr3 (1-46)||(41529975-41530020)
chr3 (11-51)||(35033355-35033395)
chr3 (7-51)||(42026565-42026609)
chr3 (1-64)||(25191573-25191636)
chr3 (3-98)||(42510041-42510136)
chr3 (1-51)||(48532166-48532217)
chr3 (1-51)||(2133635-2133685)
chr3 (1-51)||(24778632-24778682)
chr3 (1-51)||(41971293-41971343)
chr3 (1-63)||(48734170-48734232)
chr3 (1-51)||(50631904-50631954)
chr3 (1-50)||(24541355-24541404)
chr3 (18-51)||(45373359-45373392)
chr3 (5-50)||(46140617-46140662)
chr3 (1-101)||(15296066-15296166)
chr3 (1-49)||(28245648-28245696)
[»] scaffold1318 (1 HSPs)
scaffold1318 (1-51)||(540-590)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-51)||(28912-28962)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-51)||(82927-82974)
[»] scaffold0692 (1 HSPs)
scaffold0692 (5-51)||(4845-4891)
[»] scaffold0570 (1 HSPs)
scaffold0570 (1-51)||(971-1021)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-51)||(16787-16837)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-51)||(160347-160397)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-51)||(163217-163267)


Alignment Details
Target: chr5 (Bit Score: 474; Significance: 0; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 1 - 537
Target Start/End: Complemental strand, 28411935 - 28411402
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28411935 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccaagtcatttatctctagatccttcctaatag 28411836  T
Q  101 tagtagtgtttgaaaaatcaaacgagattattcaaccggttgaaccttgaaccggcctttactacggttcaaatattattggcggtacaattgcagcttt 200  Q
    ||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28411835 tagt---gtttgaaaaatcaaacgagattattcaactggttgaaccttgaaccggcctttactacggttcaaatattattggcagtacaattgcagcttt 28411739  T
Q  201 gttccgatttaagcgctttaaggaagttgaaccgtgacctagatgtcccgtcggttcaatgtctgatttggttgttaagagattggttgatagcttgtgt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  28411738 gttccgatttaagcgctttaaggaagttgaaccatgacctagatgtcccgccggttcaatgtctgatttggttgttaagagattagttgatagcttgtgt 28411639  T
Q  301 gttgaagtagttatattctggttcttgagaccatttatgattttctatattttttatagcactaatgtattttatgaccttgtatacaggttaggcatgc 400  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28411638 gttgaagtagttatattctggttcttgaaaccatttatgattttctatattttttatagcactaatgtattttatgaccttgtatacaggttaggcatgc 28411539  T
Q  401 ccaaggagttcataatgtagaaggagaaaagaaccatgatgcttacttatcttatgannnnnnngatgcaaacctaactcctcttggatggcagcaggta 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  28411538 ccaaggagttcataatgtagaaggagaaaagaaccatgatgcttacttatcttatgatttttttgatgcaaacctaactcctcttggatggcagcaggta 28411439  T
Q  501 gttgcttttccaacttttttgaatgtcatgctgtcaa 537  Q
    |||||||||||||||||||||||||||||||||||||    
T  28411438 gttgcttttccaacttttttgaatgtcatgctgtcaa 28411402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 1525893 - 1525803
Alignment:
Q  11 ggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||| | |||||||||||| ||||||||||||||||    
T  1525893 ggtcggctacatgaatcaaacaacgccatagcgttctatcaaaaaccatgtctttctccaactcatttatctctggatccttcctaatagt 1525803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3442894 - 3442982
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatc 89  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||||||| | ||||| |||||||||||    
T  3442894 cactaagtggggtcggctacatgaatcaaacgacgccatagtgttctatcaaaaaccatgtctttctccaattcattaatctctagatc 3442982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 37065728 - 37065635
Alignment:
Q  8 tggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    |||||||||||||||||||||||| ||  ||||||| ||||||| ||| ||||| ||||||| | |||||||||||||||||||||||||||||    
T  37065728 tggggtcggctacatgaatcaaacgacttcatagtgctctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagt 37065635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 33667691 - 33667596
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaata 99  Q
    |||||||||| ||||||| |||||||||||||||| |||||||||||| ||| ||||| ||||||| | ||||| ||||||||||||||| |||||    
T  33667691 taagtggggttggctacacgaatcaaacaacgccaaagtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaata 33667596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 11002444 - 11002544
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||| |||||| ||||||||||||||||| ||||||||||||||||| |||  |||  ||||||| | ||||||||||||||||| || |||||||    
T  11002444 cactaagtagggtcgactacatgaatcaaacaatgccatagtgttctatcaaaaactatgcctttctccaactcatttatctctagatcgttactaatag 11002543  T
Q  101 t 101  Q
    |    
T  11002544 t 11002544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 1935363 - 1935281
Alignment:
Q  19 acatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    ||||||||||||| || |||||||||||| ||| ||| | ||| ||||||| | |||||||||||||||||||||||||||||    
T  1935363 acatgaatcaaacgacaccatagtgttctgtcaaaaaccttgtctttctccaactcatttatctctagatccttcctaatagt 1935281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1935452 - 1935402
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  1935452 cactaagtggggtcggctatatgaatcaaacaacgccagagtgttctatca 1935402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28976882 - 28976932
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  28976882 cactaagtggggtcggctacatgaatcaaatgacgccatagtgttctatca 28976932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 21916123 - 21916042
Alignment:
Q  17 ctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaat 98  Q
    ||||||||||||||| | | ||||| ||||||||| |||  |||| ||||||| | ||||||||||||||||||||||||||    
T  21916123 ctacatgaatcaaacgatgtcatagagttctatcaaaaataatgtatttctccaactcatttatctctagatccttcctaat 21916042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16133995 - 16134094
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||||||||| | ||||||||||||||||||  ||| |||||||  | ||| ||||| ||||||| | |||||||||| |||||||||| ||||||    
T  16133995 cactaagtggggtcaggtacatgaatcaaacaacgtaatattgttctaata-aaaccatgtctttctccaaatcatttatctttagatccttcataatag 16134093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2713195 - 2713103
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||||||||        ||| ||||||| | ||||| ||||||||||||||| ||||||    
T  2713195 cactaagtgggctcggctacatgaatcaaacgatgccatagtgttctatc--------tgtctttctccaactcattcatctctagatccttcttaatag 2713104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2915519 - 2915569
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  2915519 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 2915569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12492407 - 12492457
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  12492407 cactaagtggggtcggctacatgcatcaaatgacgccatagtgttctatca 12492457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13561409 - 13561459
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  13561409 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 13561459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29816641 - 29816591
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  29816641 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 29816591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30213834 - 30213784
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  30213834 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 30213784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2075496 - 2075546
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||||||||||  |||||||||| ||||||||    
T  2075496 cactaagtggggttggctacatgaatcaaatgacgccatagtattctatca 2075546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3302103 - 3302053
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||||| |||||||||||||    
T  3302103 cactaagtggggtcggctacatggatcaaatgacgccgtagtgttctatca 3302053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4496643 - 4496593
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | |||||||||||||||||    
T  4496643 cactaagtggggtcggctacatggatcaaatgatgccatagtgttctatca 4496593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5558400 - 5558350
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | |||||||||||||||||    
T  5558400 cactaagtggggtcggctacatggatcaaattatgccatagtgttctatca 5558350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9121101 - 9121147
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttct 47  Q
    ||||||||| ||||||||||||||||||||| | |||||||||||||    
T  9121101 cactaagtgaggtcggctacatgaatcaaacgatgccatagtgttct 9121147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 10639557 - 10639511
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||    
T  10639557 aagtggggtcggctacatggatcaaatgacgccatagtgttctatca 10639511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20457032 - 20456982
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  20457032 cactaagtggggtcggctacatggatcaaatgacgccataatgttctatca 20456982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38684739 - 38684689
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||  |||||||||||||| ||||||||| ||||||||||    
T  38684739 cactaagtggggtcaactacatgaatcaaataacgccataatgttctatca 38684689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38685226 - 38685176
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  38685226 cactaagtggggtcggctacatggatcaaatgacgccatattgttctatca 38685176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 1174738 - 1174649
Alignment:
Q  11 ggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||| ||| ||| ||| ||||||||||||||||||  |||| ||| ||||| ||||||  | ||||| ||||||||||||||| ||||||    
T  1174738 ggtcagctgcatcaattaaacaacgccatagtgttacatcaaaaaccatgtctttctcaaactcattaatctctagatccttcttaatag 1174649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 11675788 - 11675739
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||||| || |||| |||||||| ||||||||||    
T  11675788 actaagtggggtcggctacatggattaaactacgccataatgttctatca 11675739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 408517 - 408565
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    ||||||||||||||||||||||| ||||||  |||||||||| ||||||    
T  408517 cactaagtggggtcggctacatggatcaaatgacgccatagtattctat 408565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 15588413 - 15588497
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctcta 85  Q
    |||||||| |||||||||||||  ||||||| |||||||| |||||| ||| | | ||||||||| ||| | |||||| ||||||    
T  15588413 cactaagtagggtcggctacatagatcaaacgacgccataatgttctgtcatataccatgtttttatccaactcatttctctcta 15588497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7640530 - 7640593
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttt 64  Q
    ||||||||||| ||||||||||| ||||||  ||||| ||||||||||||| ||| ||| ||||    
T  7640530 cactaagtgggatcggctacatggatcaaattacgccgtagtgttctatcataaaccatatttt 7640593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 14911428 - 14911381
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||| ||||||  |||||||||| ||||||||    
T  14911428 taagtggggtcggctacatggatcaaatgacgccatagtattctatca 14911381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 418061 - 418107
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  418061 aagtggggtcggctacatggatcaaattacgccataatgttctatca 418107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1275523 - 1275473
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||| |||| ||||||||||    
T  1275523 cactaagtggggtcggctacatggatcaaatgacgtcataatgttctatca 1275473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1287602 - 1287652
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| |||||   |||||||||||| ||||||    
T  1287602 cactaagtggggtcggctacatggatcaactgacgccatagtgtactatca 1287652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 92
Target Start/End: Original strand, 10082777 - 10082859
Alignment:
Q  10 gggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatcctt 92  Q
    ||||| ||||||||||||| || ||| ||||||||  || || ||| ||||| ||||||| | ||||| ||||||||||||||    
T  10082777 gggtcagctacatgaatcagacgacgtcatagtgtgttaacaaaaaccatgtctttctccaactcattaatctctagatcctt 10082859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15252767 - 15252817
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||||||||| |||| ||  |||| ||||||||||    
T  15252767 cactaagtggggtcggctacatgaattaaactacatcataatgttctatca 15252817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38132595 - 38132545
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||| ||||| ||||||  |||||||| ||||||||||    
T  38132595 cactaagtggggtcggccacatggatcaaattacgccataatgttctatca 38132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 28140 - 28087
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaa 55  Q
    ||||| ||||||| |||||||| ||||||  | |||||||||||||||||||||    
T  28140 actaaatggggtcagctacatgtatcaaattatgccatagtgttctatcagaaa 28087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 1935399 - 1935359
Alignment:
Q  19 acatgaatcaaacaacgccatagtgttctatcagaaaacatg 60  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  1935399 acatgaatcaaacgacgccatagtgttctatca-aaaacatg 1935359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 6788325 - 6788276
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||| ||||||||||||||||||||  |||| ||| ||||||||||    
T  6788325 actaagtgaggtcggctacatgaatcaaattacgctataatgttctatca 6788276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 21952621 - 21952588
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaac 34  Q
    |||||||||||||||||||||| |||||||||||    
T  21952621 cactaagtggggtcggctacataaatcaaacaac 21952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27386599 - 27386554
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttc 46  Q
    ||||||||||||||||||||||| ||||||  |||||||| |||||    
T  27386599 cactaagtggggtcggctacatggatcaaattacgccataatgttc 27386554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32442148 - 32442197
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    |||||||||| |||||||||||| ||||||  |||||||| |||||||||    
T  32442148 cactaagtggagtcggctacatggatcaaattacgccataatgttctatc 32442197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42272736 - 42272687
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    |||||||||||||| |||||||| ||||||  |||||||| |||||||||    
T  42272736 cactaagtggggtcagctacatggatcaaatgacgccataatgttctatc 42272687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 34746006 - 34745906
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| | |||||||||| |||||||||||||||||    
T  34746006 cactaagtggggtcggctacatgaatcaaacaacgccatagcgttctatcaaaaaccatgtttttctccaactcatttatctttagatccttcctaatag 34745907  T
Q  101 t 101  Q
    |    
T  34745906 t 34745906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45558589 - 45558489
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||| ||||||  ||||||||||||||  ||||||||||||||||||| ||| ||||| |||| || | |||||||||||||||||||||| |||||    
T  45558589 cactaagcggggtcaactacatgaatcaaatgacgccatagtgttctatcaaaaaccatgtctttcaccaactcatttatctctagatccttcccaatag 45558490  T
Q  101 t 101  Q
    |    
T  45558489 t 45558489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 5336168 - 5336076
Alignment:
Q  10 gggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagta 102  Q
    |||||||||||||||||||||| |||||||||| ||| |||| ||| ||||| ||||||| | ||||| ||||||||||| ||| ||||||||    
T  5336168 gggtcggctacatgaatcaaacgacgccatagtattcaatcaaaaaccatgtctttctccaactcattaatctctagatcattcttaatagta 5336076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17759532 - 17759483
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17759532 cactaagtggggtcggctacatgaatcaaacaacaccatagtgttctatc 17759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19119447 - 19119536
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatcc 90  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||| ||||| ||  ||||| ||||||  | ||||| ||||||||||||    
T  19119447 cactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatcc 19119536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25578119 - 25578027
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    |||||||| || | ||||||| ||||| ||||||||||||||||| ||||| ||| ||||| ||||||| | ||||| |||||||||||||||    
T  25578119 cactaagtaggtttggctacacgaatctaacaacgccatagtgttttatcaaaaaccatgtctttctccaattcattaatctctagatccttc 25578027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 48735924 - 48736022
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||| ||||||||||||||||| |||||||||| |||| ||| ||| ||||| ||||||  | ||||||||||||||| || | |||||||    
T  48735924 cactaagtggggttggctacatgaatcaaacgacgccatagtattct-tcataaaccatgtctttctcaaactcatttatctctagaaccctactaatag 48736022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6375127 - 6375077
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  6375127 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 6375077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11594219 - 11594169
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  11594219 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 11594169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12841298 - 12841348
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  12841298 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 12841348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28208351 - 28208401
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  28208351 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 28208401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31682625 - 31682675
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  31682625 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 31682675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34035177 - 34035227
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  34035177 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 34035227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35906224 - 35906274
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  35906224 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 35906274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36652251 - 36652201
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  36652251 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 36652201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38607251 - 38607201
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||||    
T  38607251 cactaagtggagtcggctacatggatcaaacgacgccatagtgttctatca 38607201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39906395 - 39906445
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  39906395 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 39906445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40979951 - 40980001
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  40979951 cactaagtggggtcggctacatggatcaaattacgccatagtgttctatca 40980001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43281933 - 43281883
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  43281933 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 43281883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45836505 - 45836555
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  45836505 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 45836555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 22174254 - 22174209
Alignment:
Q  6 agtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||    
T  22174254 agtggggtcggctacatggatcaaacaacgccataatgttctatca 22174209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47155195 - 47155232
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgcca 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47155195 cactaagtggggtcggctacatgaatcaaacaacgcca 47155232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31840489 - 31840442
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttcta 48  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  31840489 cactaagtagggtaggctacatgaatcaaacgacgccatagtgttcta 31840442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2885745 - 2885795
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || ||||||||||||||||    
T  2885745 cactaagtggggtcggctacatggatcaaattacaccatagtgttctatca 2885795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15682433 - 15682383
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  15682433 cactaagtggggttggctacatggatcaaagtacgccatagtgttctatca 15682383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27649039 - 27648989
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  27649039 cactaagtggggtcggctacatggatcaaattacgccacagtgttctatca 27648989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27893586 - 27893644
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacat 59  Q
    |||||||| |||||||||||||||||||||  | |||||| |||||||||| |||||||    
T  27893586 cactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaacat 27893644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29650643 - 29650593
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||||| |||||||||||||    
T  29650643 cactaagtggggtcggctacatggatcaaatgacgccttagtgttctatca 29650593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31869125 - 31869175
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  31869125 cactaagtggggtcggctacatggatcaaatgacgccagagtgttctatca 31869175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35865962 - 35865912
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||| |||||    
T  35865962 cactaagtggggttggctacatgaaccaaacgacgccatagtgttttatca 35865912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 37618204 - 37618154
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || ||||||||||||||||    
T  37618204 cactaagtggggtcggctacatggatcaaatgacaccatagtgttctatca 37618154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49029535 - 49029485
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  49029535 cactaagtggggttggctacatggatcaaatgacgccatagtgttctatca 49029485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14594011 - 14593951
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgt 61  Q
    |||||||||||||||||||||||||| | || || || ||||||||||||| ||| |||||    
T  14594011 cactaagtggggtcggctacatgaattatacgacaccgtagtgttctatcaaaaaccatgt 14593951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16013534 - 16013474
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgt 61  Q
    |||||||||||||||||||||||||| | || || || ||||||||||||| ||| |||||    
T  16013534 cactaagtggggtcggctacatgaattatacgacaccgtagtgttctatcaaaaaccatgt 16013474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28627956 - 28628056
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||||| |||||||||||| ||||||  |||||||| |||||||||| ||| ||  |||   ||| | ||||| ||||||| ||| ||||||||||    
T  28627956 cactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatctttcctaatag 28628055  T
Q  101 t 101  Q
    |    
T  28628056 t 28628056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6682612 - 6682581
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaaca 32  Q
    ||||||||||||||||||||||||||||||||    
T  6682612 cactaagtggggtcggctacatgaatcaaaca 6682581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4604806 - 4604756
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  |||||||| ||||||||||    
T  4604806 cactaagtggggttggctacatggatcaaagtacgccataatgttctatca 4604756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6807750 - 6807700
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||  |||||||||||| || |||||||| ||||||||||    
T  6807750 cactaagtggggtcacctacatgaatcatacgacgccataatgttctatca 6807700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 19262485 - 19262531
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| ||||| ||||||||||||||| ||||||| ||||||||||    
T  19262485 aagtggcgtcggttacatgaatcaaacaccgccataatgttctatca 19262531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22349879 - 22349829
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||| ||||||| ||||||  |||||||||| ||||||||    
T  22349879 cactaagtggggtcgactacatggatcaaatgacgccatagtattctatca 22349829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24777220 - 24777170
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||| || ||||||||||||||||||  ||| |||||||||||||||    
T  24777220 cactaagtaggatcggctacatgaatcaaatgacgtcatagtgttctatca 24777170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30814148 - 30814206
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacat 59  Q
    ||||||||||||||||||||||| ||||||  |||  ||| |||||||||| |||||||    
T  30814148 cactaagtggggtcggctacatggatcaaattacgtgataatgttctatcataaaacat 30814206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31681043 - 31681093
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||| |||||| ||||||||    
T  31681043 cactaagtggggtcggctacatggatcaaattacgtcatagtattctatca 31681093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32631823 - 32631773
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||  ||||||  ||||||||| |||||||||    
T  32631823 cactaagtggggtcggctacatagatcaaatgacgccatagcgttctatca 32631773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 34869679 - 34869629
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| | |||||||||||||| ||||||  |||||||||||||||||||    
T  34869679 cactaattagggtcggctacatggatcaaatgacgccatagtgttctatca 34869629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 36514273 - 36514323
Alignment:
Q  43 gttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    ||||||||| ||| ||||| ||||||| | |||||||||||||||||||||    
T  36514273 gttctatcaaaaaccatgtctttctccaattcatttatctctagatccttc 36514323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 46355879 - 46355929
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | | |||||||||||||||    
T  46355879 cactaagtggggtcggctacatggatcaaatgatggcatagtgttctatca 46355929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 47852344 - 47852298
Alignment:
Q  3 ctaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||||||    
T  47852344 ctaagtggggtcggctacatggatcaaattacgccataatgttctat 47852298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 33103184 - 33103135
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||||| ||||||  |||| || |||||||||||    
T  33103184 actaagtggggtcggctacatggatcaaattacgctatggtgttctatca 33103135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 38921111 - 38921179
Alignment:
Q  3 ctaagtggggtcgg--ctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctcc 69  Q
    ||||||||||||||  ||||||||||||||  |||||||||  |||||||| ||| ||||| |||||||    
T  38921111 ctaagtggggtcggtcctacatgaatcaaatgacgccatagccttctatcaaaaaccatgtctttctcc 38921179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40630693 - 40630652
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagt 42  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  40630693 cactaagtggggtcggctacatggatcaaatgacgccatagt 40630652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45601735 - 45601638
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaat 98  Q
    ||||||||| | || |||||||| ||||||  || |||||||||||||||| ||| ||| ||||  ||| | ||||| ||||||||||| ||| ||||    
T  45601735 cactaagtgagttcagctacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaat 45601638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12966275 - 12966243
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaa 33  Q
    ||||||||||| |||||||||||||||||||||    
T  12966275 cactaagtgggatcggctacatgaatcaaacaa 12966243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28708640 - 28708596
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgtt 45  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||    
T  28708640 cactaagtggggtcggctacatggatcaaattacgccataatgtt 28708596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44855197 - 44855241
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgtt 45  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||    
T  44855197 cactaagtggggtcggctacatggaccaaattacgccatagtgtt 44855241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 2e-35; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44437744 - 44437844
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||| ||||||    
T  44437744 cactaagtggggtcggctacatgaattaaacaacgccatagtgttctatcaaaaaccatgtttttctccaactcatttatctctagatccttcttaatag 44437843  T
Q  101 t 101  Q
    |    
T  44437844 t 44437844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 12489825 - 12489925
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||| ||||| ||||||| | ||||||||||||||||||||||||||||    
T  12489825 cactaagtggggtcggctacatgaatcaaacgacgccaaagtgttatatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatag 12489924  T
Q  101 t 101  Q
    |    
T  12489925 t 12489925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42543494 - 42543394
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| || || ||||||| | ||||||||||||||||||||||||||||    
T  42543494 cactaagtggggccggctacatgaatcaaacaacgccatagcgttctatcaaaaagcacgtctttctccaactcatttatctctagatccttcctaatag 42543395  T
Q  101 t 101  Q
    |    
T  42543394 t 42543394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12470920 - 12471012
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    |||||| |||||||||||||||||| ||||| ||||||||||| | ||||| ||| ||||| ||||||| | |||||||||||||||||||||    
T  12470920 cactaaatggggtcggctacatgaagcaaacgacgccatagtgatatatcaaaaaccatgtctttctccaactcatttatctctagatccttc 12471012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 93
Target Start/End: Original strand, 5759019 - 5759110
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    ||||||||||||| ||||| |||||||||| || |||||||||||||||| ||| ||||| ||||||| | ||||| |||||||||||||||    
T  5759019 actaagtggggtcagctacctgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttctccaactcattgatctctagatccttc 5759110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 4598587 - 4598684
Alignment:
Q  3 ctaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||  |||| |||||||||||||  ||||||||||||||||||| ||   |||| ||||||| | ||||||||||||||||||||||||||||    
T  4598587 ctaagtggaatcggttacatgaatcaaatgacgccatagtgttctatcaaaatctatgtctttctccaactcatttatctctagatccttcctaatag 4598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 28960234 - 28960326
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    |||||| ||| |||| ||||||||||||||| || |||||||| ||||||| ||| ||| | ||||||| | |||||||||||||||||||||    
T  28960234 cactaaatggagtcgactacatgaatcaaacgacaccatagtgctctatcaaaaaccatatctttctccaactcatttatctctagatccttc 28960326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29968634 - 29968682
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29968634 cactaagtggagtcggctacatgaatcaaacaacgccatagtgttctat 29968682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 227448 - 227398
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  227448 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 451671 - 451721
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  451671 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 451721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2610847 - 2610797
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  2610847 cactaagtggggtcggttacatggatcaaataacgccatagtgttctatca 2610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3635346 - 3635396
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  3635346 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 3635396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12474950 - 12475000
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  12474950 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 12475000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19334175 - 19334241
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttct 67  Q
    |||||||||| |||||||||||||||||||  ||| ||||||||||||||| ||| ||||| |||||    
T  19334175 cactaagtggagtcggctacatgaatcaaatgacgtcatagtgttctatcaaaaaccatgtctttct 19334241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28508937 - 28508887
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  28508937 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 28508887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30306291 - 30306241
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  30306291 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 30306241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38430143 - 38430093
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  38430143 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 38430093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4807854 - 4807805
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  4807854 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatc 4807805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 20129627 - 20129716
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    ||||| |||||||||||||||||||||| ||| ||||||||| ||| |  || ||||| ||||||| | ||||| |||||||||| ||||    
T  20129627 taagtcgggtcggctacatgaatcaaacgacgtcatagtgttatattaacaaccatgtatttctccaattcattaatctctagattcttc 20129716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17670727 - 17670680
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttcta 48  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  17670727 cactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 17670680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 23997858 - 23997811
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||||||| |||||||||||||| |||||    
T  23997858 taagtggggtcggatacatgaatcaaataacgccatagtgttttatca 23997811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39709224 - 39709287
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttt 64  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||| |||| ||| ||| ||||    
T  39709224 cactaagtggggtcggctacatggatcaaattacgccatagtgttcaatcataaaccatatttt 39709287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3243676 - 3243726
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||| || ||||||  |||||||||||||||||||    
T  3243676 cactaagtggggtcggctacctggatcaaatgacgccatagtgttctatca 3243726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7326183 - 7326233
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  7326183 cactaagtggggttggctacatggatcaaatgacgccatagtgttctatca 7326233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11992131 - 11992181
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| |||||||| |||||| ||||||||| ||||||||||    
T  11992131 cactaagtggggtcagctacatggatcaaataacgccataatgttctatca 11992181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12520085 - 12520135
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||| |||||    
T  12520085 cactaagtggggtcggctacatggatcaaattacgccatagtgttttatca 12520135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 25834937 - 25834887
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  25834937 cactaagtggggtcggctacatggatcaaatgacgccacagtgttctatca 25834887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38328393 - 38328443
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | |||||||||||||||||    
T  38328393 cactaagtggggtcggctacatggatcaaatgaagccatagtgttctatca 38328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 19225039 - 19224990
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||||| ||||||| ||  |||||||||||||||    
T  19225039 actaagtggggtcggctacatggatcaaacgacatcatagtgttctatca 19224990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 32541820 - 32541861
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgtt 45  Q
    |||||||||||||||||||||||||||| || ||||||||||    
T  32541820 taagtggggtcggctacatgaatcaaacgaccccatagtgtt 32541861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 45367648 - 45367745
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaat 98  Q
    ||||||||||||||||| ||||| ||||||  ||| ||||||||||||||| ||| ||| |||   ||| | ||||||| ||||| |||||| |||||    
T  45367648 cactaagtggggtcggcgacatggatcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcatttacctctaaatcctttctaat 45367745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8197564 - 8197664
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||| |||||||||||||| ||||||| |||||||| | |||||||| | | ||| ||| | ||| | ||||| |||| |||||| ||| ||||||    
T  8197564 cactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcattaatctttagatctttcttaatag 8197663  T
Q  101 t 101  Q
    |    
T  8197664 t 8197664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8202324 - 8202424
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||| |||||||||||||| ||||||| |||||||| | |||||||| | | ||| ||| | ||| | ||||| |||| |||||| ||| ||||||    
T  8202324 cactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcattaatctttagatctttcttaatag 8202423  T
Q  101 t 101  Q
    |    
T  8202424 t 8202424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 33
Target Start/End: Original strand, 24101779 - 24101810
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaa 33  Q
    ||||||||||||||||||||||||||||||||    
T  24101779 actaagtggggtcggctacatgaatcaaacaa 24101810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 624709 - 624759
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||| ||||||||||||||||||||||| |  |||||| |||||||||    
T  624709 cactaagcggggtcggctacatgaatcaaactataccatagcgttctatca 624759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3720438 - 3720488
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || ||||| ||||||||||    
T  3720438 cactaagtggggtcggctacatggatcaaattacaccataatgttctatca 3720488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8181039 - 8180989
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || | ||||||||||||||    
T  8181039 cactaagtggggtcggctacatggatcaaatgacactatagtgttctatca 8180989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9496125 - 9496075
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  |||||||| ||||||||||    
T  9496125 cactaagtggggttggctacatggatcaaattacgccataatgttctatca 9496075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9531623 - 9531673
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||| ||||    
T  9531623 cactaagtggggtcggctacatggatcaaattacgccataatgttccatca 9531673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12734959 - 12734909
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||| ||||||| ||||||  || ||||||||||||||||    
T  12734959 cactaagtggggtcgactacatggatcaaattacaccatagtgttctatca 12734909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 15025741 - 15025703
Alignment:
Q  13 tcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  15025741 tcggctacatgaatcaaacgatgccatagtgttctatca 15025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17429309 - 17429259
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||||||||||  | | |||| ||||||||||    
T  17429309 cactaagtggggtcggctacatgaatcaaattatgtcataatgttctatca 17429259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33504483 - 33504433
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||| ||| ||||||  |||||||| ||||||||||    
T  33504483 cactaagtggggtcggctagatggatcaaattacgccataatgttctatca 33504433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41763066 - 41763124
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacat 59  Q
    ||||||||||||||||||||||| ||||||  |||||   ||||||||||| |||||||    
T  41763066 cactaagtggggtcggctacatggatcaaatgacgcccgggtgttctatcaaaaaacat 41763124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42549860 - 42549910
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||||||||||  |||||||  ||||||||||    
T  42549860 cactaagtggggttggctacatgaatcaaattacgccatgatgttctatca 42549910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45543096 - 45543146
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||  ||||||  |||||||| ||||||||||    
T  45543096 cactaagtggggtcggctacatagatcaaagtacgccataatgttctatca 45543146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 3481412 - 3481363
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| |||||||| ||||||  |||||||| ||||||||||    
T  3481412 actaagtggggtcagctacatggatcaaattacgccataatgttctatca 3481363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 3866330 - 3866281
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||||| ||||||  | | |||||||||||||||    
T  3866330 actaagtggggtcggctacatggatcaaatgatgtcatagtgttctatca 3866281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 31959779 - 31959730
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| |||||||| ||||||  | |||||||||||||||||    
T  31959779 actaagtggggtctgctacatggatcaaattatgccatagtgttctatca 31959730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 36183709 - 36183660
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||||| ||||||   | ||||||||||||||||    
T  36183709 actaagtggggtcggctacatggatcaaatggcaccatagtgttctatca 36183660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 9554096 - 9554140
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttcta 48  Q
    ||||||||||||||||||||||| |||| || ||||| |||||||    
T  9554096 taagtggggtcggctacatgaattaaactacaccataatgttcta 9554140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 23915722 - 23915766
Alignment:
Q  7 gtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||| |||| ||||||  |||||||||||||||||||    
T  23915722 gtggggtcggctgcatggatcaaattacgccatagtgttctatca 23915766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25384728 - 25384680
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    ||||||||| ||| ||||||||| ||||||  |||||||||||||||||    
T  25384728 cactaagtgaggttggctacatggatcaaattacgccatagtgttctat 25384680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 1e-30; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39953287 - 39953387
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | |||| ||| ||||||||||||  | ||||||||||||||||||||||||||||    
T  39953287 cactaagtggggtcggctacatgaatcaaacaactccatagtgtcccatcaaaaaccatgtttttctctaactcatttatctctagatccttcctaatag 39953386  T
Q  101 t 101  Q
    |    
T  39953387 t 39953387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30812839 - 30812935
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaa 97  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||| ||| ||||| ||| ||| | |||||||||||||||||||||||||    
T  30812839 cactaagtggggtcggctacatgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttttccaactcatttatctctagatccttcctaa 30812935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 7531668 - 7531767
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    |||||||| | ||||||||||||||||||| || |||||||||||||||| ||| ||||| ||||||| | |||||||||||||||||||||||||||||    
T  7531668 actaagtgagttcggctacatgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagt 7531767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16351636 - 16351537
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||| ||||||||||||||| | ||||||||||||||| | ||| ||||| ||||| | | ||||| ||||||||||||||| ||||||    
T  16351636 cactaagtggggtcgtctacatgaatcaaacgatgccatagtgttctattaaaaaccatgtctttct-caactcattaatctctagatccttcttaatag 16351538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 38901849 - 38901942
Alignment:
Q  8 tggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    ||||||| |||||||||||||||   |||||||||||| ||||| ||| ||||| ||||||| | ||||| |||||||||| ||||||||||||    
T  38901849 tggggtccgctacatgaatcaaatgccgccatagtgttatatcaaaaaccatgtctttctccaaatcattaatctctagattcttcctaatagt 38901942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43733465 - 43733374
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||||||  ||||||  ||||| ||| | ||||| |||||||||||||||    
T  43733465 cactaagtgggatcggctacatgaatgaaacgacgccatagtgttctatc-caaaacacatttttatccaactcattaatctctagatccttc 43733374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26685942 - 26686032
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatcct 91  Q
    ||||||||||||| |||||||||||||||||  | |||||||||||||||| ||| ||||| ||||||| | ||||  |||||||| ||||    
T  26685942 cactaagtggggttggctacatgaatcaaacggcaccatagtgttctatcaaaaaccatgtctttctccaactcatcaatctctaggtcct 26686032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 36565264 - 36565314
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  36565264 cactaagtggggtcggctacatggatcaaataacgccatagtgttctatca 36565314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11523746 - 11523796
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  11523746 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 11523796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12491161 - 12491211
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  12491161 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 12491211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14742105 - 14742155
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  14742105 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 14742155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32043846 - 32043757
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    |||||||||||||| | ||||||||||||||   ||||||||||||||||| ||| ||||| ||||||| | ||||| |||| ||||||||||    
T  32043846 cactaagtggggtcag-tacatgaatcaaacg--gccatagtgttctatcaaaaaccatgtctttctccaactcattgatctttagatccttc 32043757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 30456323 - 30456367
Alignment:
Q  7 gtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||| |||||||||||||||||||| |||||||||||||||||||    
T  30456323 gtggagtcggctacatgaatcaaacgacgccatagtgttctatca 30456367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 490594 - 490544
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  490594 cactaagtggggtcggctacatggatcaaattacgccataatgttctatca 490544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2796812 - 2796762
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||| ||||||||||||||  |||||||| ||||||||||    
T  2796812 cactaagtggggtcgtctacatgaatcaaattacgccatactgttctatca 2796762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21121404 - 21121355
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  21121404 cactaagtggggtcggctacatg-atcaaattacgccatagtgttctatca 21121355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25473426 - 25473476
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||| ||||||||||||||    
T  25473426 cactaagtggggtcggctacatggatcaaatgacgctatagtgttctatca 25473476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 36545408 - 36545358
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  36545408 cactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatca 36545358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44529484 - 44529434
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | |||||||||||||||||    
T  44529484 cactaagtggggtcggctacatggatcaaatgatgccatagtgttctatca 44529434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1928610 - 1928659
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    ||||||||||||||||||||||| ||||||  |||||||| |||||||||    
T  1928610 cactaagtggggtcggctacatggatcaaattacgccataatgttctatc 1928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35914624 - 35914687
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttt 64  Q
    |||||||||||||| |||||||| ||||||  |||||||| |||||||||| ||| ||| ||||    
T  35914624 cactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttt 35914687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 42469753 - 42469800
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||| |||||||| ||||||  |||||||||||||||||||    
T  42469753 taagtggggtcagctacatggatcaaatgacgccatagtgttctatca 42469800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 79286 - 79236
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||| |||||| ||||||| |||||||  ||||||||||    
T  79286 cactaagtggggtcgggtacatggatcaaacgacgccattatgttctatca 79236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8932962 - 8932912
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| |||||||| ||||||  ||||||||||||| |||||    
T  8932962 cactaagtggggtcagctacatggatcaaatgacgccatagtgttttatca 8932912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18473995 - 18474045
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||| |||||||||||||||||||| | | |||| ||||||||||    
T  18473995 cactaagtggtgtcggctacatgaatcaaacgaagtcataatgttctatca 18474045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 23492293 - 23492243
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| || |||  || ||||||||||||||||    
T  23492293 cactaagtggggtcggctacatggattaaatgacaccatagtgttctatca 23492243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27556325 - 27556375
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||||||||||    
T  27556325 cactaagtggggtcggctacatggatcaaattatgccataatgttctatca 27556375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32569733 - 32569783
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| ||||||||||||||| |||||||  ||| |||||||||||||||    
T  32569733 cactaaatggggtcggctacataaatcaaatgacgtcatagtgttctatca 32569783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32931219 - 32931169
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||||||||||    
T  32931219 cactaagtggggtcggctacatggatcaaattatgccataatgttctatca 32931169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35646953 - 35647003
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||| |||| ||||||  |||||||| ||||||||||    
T  35646953 cactaagtggggtcggctgcatggatcaaattacgccataatgttctatca 35647003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42854027 - 42854077
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| |||||||||||||||| ||||||  ||||||||||||| |||||    
T  42854027 cactaaatggggtcggctacatggatcaaatgacgccatagtgttatatca 42854077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44047555 - 44047605
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| |||||||| ||||||  ||||||| |||||||||||    
T  44047555 cactaagtggggtcagctacatggatcaaatgacgccatggtgttctatca 44047605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44699725 - 44699675
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| |||||| | ||||||  |||||||||||||||||||    
T  44699725 cactaagtggggtctgctacagggatcaaattacgccatagtgttctatca 44699675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45419494 - 45419444
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || ||||| ||||||||||    
T  45419494 cactaagtggggtcggctacatggatcaaattacaccataatgttctatca 45419444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 1335585 - 1335556
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaa 30  Q
    ||||||||||||||||||||||||||||||    
T  1335585 cactaagtggggtcggctacatgaatcaaa 1335556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 34196640 - 34196567
Alignment:
Q  20 catgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    |||||||||||| |||| |||||||||||||| | | ||||| |||||   | ||||| |||||||||||||||    
T  34196640 catgaatcaaacgacgctatagtgttctatcaaacatcatgtctttctttaaatcattaatctctagatccttc 34196567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22681527 - 22681479
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    ||||||||||||| |  |||||||||||||||| | |||||||||||||    
T  22681527 cactaagtggggttgattacatgaatcaaacaatgtcatagtgttctat 22681479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27449206 - 27449245
Alignment:
Q  1 cactaagtggggtcggcta--catgaatcaaacaacgcca 38  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  27449206 cactaagtggggtcggctatacatgaatcaaacaacgcca 27449245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37808220 - 37808268
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    |||||| |||||||||||||||||||||||| || ||||| || |||||    
T  37808220 cactaaatggggtcggctacatgaatcaaactacaccataatgctctat 37808268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 39967525 - 39967569
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttcta 48  Q
    |||||||| ||||||||||| ||||||| |||||||| |||||||    
T  39967525 taagtgggatcggctacatggatcaaactacgccataatgttcta 39967569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 4e-30; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 42285727 - 42285826
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||||||| ||| ||||| ||||||| | |||||||||||||||||||||||||||||    
T  42285727 actaagtggggttggctacatgaatcaaacaatgccatagtattctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagt 42285826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31961289 - 31961389
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||||  || ||||| ||||||| | ||||||||||||||||| ||||||||||    
T  31961289 cactaagtgaggtcggctacatgaatcaaacgacgtcatagtgttctatcaacaaccatgtctttctccaactcatttatctctagatctttcctaatag 31961388  T
Q  101 t 101  Q
    |    
T  31961389 t 31961389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31897451 - 31897551
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||| ||| |||||||||||||||||  || |||||||||||||||  || ||||| ||||||| | ||||||||||||||||||||||||||||    
T  31897451 cactaagtgaggttggctacatgaatcaaacggcgtcatagtgttctatcaacaaccatgtctttctccaactcatttatctctagatccttcctaatag 31897550  T
Q  101 t 101  Q
    |    
T  31897551 t 31897551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 46372282 - 46372183
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    ||||||||||||| |||||||||||||||  |||| |  ||||||||||| ||| ||||| ||||||| | |||||||||||||||||||||||||||||    
T  46372282 actaagtggggtcagctacatgaatcaaaggacgctacggtgttctatcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagt 46372183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10209293 - 10209195
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||||||||||||||| |||||||||| ||||||  ||||||||||| ||| ||||| ||||||| | ||||| ||||||||||||||| ||||||    
T  10209293 cactaagtggggtcggctacttgaatcaaacgacgcca--gtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatag 10209196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 50869903 - 50869994
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatcctt 92  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||||| || ||| ||||| ||||||  | ||||||||||||||||||||    
T  50869903 cactaagtggggtcagctgcatgaatcaaacgacgccatagtgttctaccaaaaaccatgtctttctctaactcatttatctctagatcctt 50869994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 17900739 - 17900639
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||||||||| |||| ||||||||||||||||||||||| ||||| | ||| ||||| ||||| | | ||||||||||||| ||| ||||| ||||    
T  17900739 cactaagtggggtcagctaaatgaatcaaacaacgccatagtgctctattaaaaaccatgtctttctacaactcatttatctctatatctttcctgatag 17900640  T
Q  101 t 101  Q
    |    
T  17900639 t 17900639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 6318920 - 6318838
Alignment:
Q  11 ggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    |||||| |||||||||||||| || |||||| ||||||||| ||| ||||||||||||| | |||||| ||||||||||||||    
T  6318920 ggtcggttacatgaatcaaacgacaccatagagttctatcaaaaaccatgtttttctccaattcatttttctctagatccttc 6318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 35555673 - 35555759
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctaga 87  Q
    |||||| ||| |||||||||||||||||||| |||||||| ||| |||||| ||| ||||| ||||||| | |||||||||||||||    
T  35555673 cactaaatggagtcggctacatgaatcaaacgacgccatactgtactatcaaaaaccatgtctttctccaactcatttatctctaga 35555759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13262471 - 13262393
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcattta 79  Q
    |||||||||| |||||||||||||||||||| ||| |||||| |||||||| ||| ||||| ||||||| | |||||||    
T  13262471 cactaagtggagtcggctacatgaatcaaacgacgtcatagttttctatcaaaaaccatgtctttctccaactcattta 13262393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2589331 - 2589242
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatcc 90  Q
    |||||| ||||||  |||||||||||||||| ||||||||||||||||||| ||| ||| ||||  ||| | ||||| ||||||||||||    
T  2589331 cactaactggggttagctacatgaatcaaacgacgccatagtgttctatcaaaaaccatattttcatccaactcattaatctctagatcc 2589242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6958261 - 6958310
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  6958261 cactaagtagggtcggctacatgaatcaaacgacgccatagtgttctatc 6958310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 44360342 - 44360277
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctcc 69  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| ||| | ||| |||||||    
T  44360342 taagtggggtcggctacatgaatcaaacgacgtcatagtgttctatcaaaaaccgtgtctttctcc 44360277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 6478722 - 6478806
Alignment:
Q  17 ctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    ||||||||||||||  |||| |||||||| ||||| ||| ||||| ||||||  | ||||||| |||||||||||||||||||||    
T  6478722 ctacatgaatcaaaggacgctatagtgttgtatcaaaaaccatgtctttctctaactcatttacctctagatccttcctaatagt 6478806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35622699 - 35622783
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctcta 85  Q
    |||||||||||||| ||||| |||||||||| | ||| ||| ||||||||| ||| ||||| ||||||| | |||||||||||||    
T  35622699 cactaagtggggtcagctacctgaatcaaacgatgccctagcgttctatcaaaaaccatgtctttctccaactcatttatctcta 35622783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32479297 - 32479234
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttt 64  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||| ||| ||| ||||    
T  32479297 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttt 32479234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4441112 - 4441062
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  4441112 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 4441062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 8598964 - 8599014
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  8598964 cactaagtggcgtcggctacatgaatcaaacgacgccataatgttctatca 8599014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27450203 - 27450253
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  27450203 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 27450253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31959837 - 31959887
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  31959837 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 31959887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49939757 - 49939807
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  49939757 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 49939807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 52569538 - 52569588
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  52569538 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 52569588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26037528 - 26037628
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||||||||||| ||| ||| |||   ||| | ||||| | ||||| ||| ||||||||||    
T  26037528 cactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattcacctctaaatctttcctaatag 26037627  T
Q  101 t 101  Q
    |    
T  26037628 t 26037628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 36556787 - 36556851
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctcc 69  Q
    |||||||||||| |||| |||||||||||||||||||||| |||||| ||| ||||  |||||||    
T  36556787 aagtggggtcgggtacacgaatcaaacaacgccatagtgtcctatcaaaaaccatgcctttctcc 36556851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 39446936 - 39446983
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  39446936 taagtggggtcggttacatgaattaaacaacgccatagtgttcaatca 39446983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 436488 - 436438
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | |||||||||||||||||    
T  436488 cactaagtggggtcggctacatggatcaaatgatgccatagtgttctatca 436438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19061958 - 19062008
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||| ||||||||||||||||| ||||||  |||||||||||||||||||    
T  19061958 cactaggtggggtcggctacatggatcaaatgacgccatagtgttctatca 19062008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19154886 - 19154936
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| ||| |||| |||||| ||||||||||||||||||||    
T  19154886 cactaagtggggtcagctgcatggatcaaataacgccatagtgttctatca 19154936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 19969440 - 19969390
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||||||||| |||||||||    
T  19969440 cactaagtggggtcggctacatggatcaaatgacgccatagcgttctatca 19969390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21237117 - 21237067
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  21237117 cactaagtggggttggctacatgtatcaaatgacgccatagtgttctatca 21237067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23906320 - 23906370
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| |||||||| ||||||  |||||||||||||||||||    
T  23906320 cactaagtggggtcagctacatggatcaaatgacgccatagtgttctatca 23906370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29399063 - 29399013
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| |||||||||||||||  |||||||| ||||||||||    
T  29399063 cactaagtggggtcagctacatgaatcaaattacgccataatgttctatca 29399013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32633429 - 32633479
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  32633429 cactaagtggggttggctacatgtatcaaatgacgccatagtgttctatca 32633479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35690530 - 35690480
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  35690530 cactaagtggggtcggctacatggatcaaattacgccataatgttctatca 35690480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40018212 - 40018262
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||| ||||| || ||||||||||    
T  40018212 cactaagtggggtcggctacatggatcaaacgacgccgtaatgttctatca 40018262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 45209228 - 45209278
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  45209228 cactaagtggggtcggctacatggatcaaactacgccataatattctatca 45209278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48622566 - 48622616
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| || |||  |||||||||||||||||||    
T  48622566 cactaagtggggtcggctacatggattaaatgacgccatagtgttctatca 48622616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5367741 - 5367672
Alignment:
Q  1 cactaagtggggtcgg-ctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctcc 69  Q
    ||||||||||| |||| ||||||||||||||| || |||| ||||||||||| ||| ||||| |||||||    
T  5367741 cactaagtgggttcgggctacatgaatcaaacgacaccatcgtgttctatcaaaaatcatgtctttctcc 5367672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 25257627 - 25257705
Alignment:
Q  9 ggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatc 89  Q
    ||||||||||||||||||||||| | ||||   |||||||||| ||||||||| ||||| | | ||||| |||||||||||    
T  25257627 ggggtcggctacatgaatcaaacgatgccaa--tgttctatcaaaaaacatgtctttcttcaactcattgatctctagatc 25257705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 1777043 - 1777090
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  1777043 taagtggggtcggctacatggatcaaatgacgccatactgttctatca 1777090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 29209201 - 29209248
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||  |||||||||||||||| || |||||||    
T  29209201 taagtggggtcggctacattgatcaaacaacgccataatgctctatca 29209248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 51550272 - 51550370
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    |||||||||  ||| ||||||  |||||||  ||| |||| |||||||||| ||  ||||| ||||||  | ||||||||||||||||||||||||||||    
T  51550272 cactaagtgcagtcagctacaaaaatcaaatgacgacataatgttctatcaaaagtcatgtctttctca-actcatttatctctagatccttcctaatag 51550370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 52227918 - 52227965
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttcta 48  Q
    |||||| || |||||||||||| |||||||| ||||||||||||||||    
T  52227918 cactaaatgaggtcggctacataaatcaaacgacgccatagtgttcta 52227965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 6957857 - 6957807
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||| ||||||||||| ||||||  ||| |||||||||||||||    
T  6957857 cactaagtgggatcggctacatggatcaaatgacgtcatagtgttctatca 6957807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8286698 - 8286648
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||| |||||||||| ||||||  ||| |||||||||||||||    
T  8286698 cactaagtgggggcggctacatggatcaaatgacgtcatagtgttctatca 8286648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21528547 - 21528497
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||   | ||||||||||||||||    
T  21528547 cactaagtggggtcggctacatggatcaaatgccaccatagtgttctatca 21528497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37042687 - 37042737
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||| |||||||||||||| ||||||| || ||||| ||||||||||    
T  37042687 cactaagtcgggtcggctacatggatcaaacgacaccataatgttctatca 37042737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 39708692 - 39708642
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||| ||||||| ||||||  ||| |||||||||||||||    
T  39708692 cactaagtggggtcgactacatggatcaaattacgacatagtgttctatca 39708642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 40932951 - 40932997
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||| |||||||  ||||||| ||||||||||    
T  40932951 aagtggggtcggctacatgcatcaaacgccgccataatgttctatca 40932997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 49738573 - 49738619
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttct 47  Q
    |||||| |||||||||||||||| |||||||| ||||||| ||||||    
T  49738573 cactaaatggggtcggctacatggatcaaacaccgccataatgttct 49738619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 56375549 - 56375499
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||| ||||||||||||| ||||||  ||| |||||||||||||||    
T  56375549 cactaagtgaggtcggctacatggatcaaatgacgtcatagtgttctatca 56375499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10775494 - 10775584
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    ||||| ||||||||||| |||| |||||||||| | ||  ||||||||||| ||| ||||| ||||||| | |||||  | ||||||||||||    
T  10775494 cactatgtggggtcggcgacataaatcaaacaatgtca--gtgttctatcaaaaaccatgtctttctccaactcattgttttctagatccttc 10775584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21359248 - 21359293
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttc 46  Q
    |||||||||||||||||| |||||||||||  |||||||| |||||    
T  21359248 cactaagtggggtcggctgcatgaatcaaattacgccataatgttc 21359293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50238638 - 50238679
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagt 42  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  50238638 cactaagtggggtcggctacatggatcaaatgacgccatagt 50238679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 50238724 - 50238765
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagt 42  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  50238724 cactaagtggggtcggctacatggatcaaatgacgccatagt 50238765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 1211418 - 1211470
Alignment:
Q  4 taagtggggtcggctacatgaatcaaa-caacgccatagtgttctatcagaaa 55  Q
    |||||||||||||||||||||||||||   ||||| ||||||||||| |||||    
T  1211418 taagtggggtcggctacatgaatcaaatttacgccttagtgttctatgagaaa 1211470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4136766 - 4136802
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgcc 37  Q
    |||||||| |||||||||||||| |||||||||||||    
T  4136766 cactaagtagggtcggctacatggatcaaacaacgcc 4136802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15661895 - 15661939
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgtt 45  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||    
T  15661895 cactaagtggggtcggctacatggatcaaattacgccataatgtt 15661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 18966860 - 18966820
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgtt 45  Q
    |||||||||||||||||||||||||||  ||||||| ||||    
T  18966860 aagtggggtcggctacatgaatcaaacggcgccataatgtt 18966820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 26024873 - 26024973
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||| ||||||||||||| || |||  || ||||| |||||||||| ||| ||||| |   ||| | ||||| ||||||||||| ||| ||||||    
T  26024873 cactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcattaatctctagatctttcttaatag 26024972  T
Q  101 t 101  Q
    |    
T  26024973 t 26024973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42639043 - 42639143
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||| ||||| |||||||||||| | || |||||||| |||||||||| | | ||| ||| | ||| | ||||| ||| ||||||| ||| ||||||    
T  42639043 cactaagcggggttggctacatgaattacacgacgccataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatag 42639142  T
Q  101 t 101  Q
    |    
T  42639143 t 42639143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28528614 - 28528514
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| ||||| ||||||| | ||||| ||||||||||||||| ||||||    
T  28528614 cactaagtggggtcggctacatgaatcaaacgacgccatagtggtctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatag 28528515  T
Q  101 t 101  Q
    |    
T  28528514 t 28528514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 40419893 - 40419798
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    |||||||||||||||||||||| |||| ||||||||||| ||||||| ||| ||||| ||||||| | ||||||||||||||||||||| |||||||    
T  40419893 aagtggggtcggctacatgaat-aaacgacgccatagtgatctatcaaaaaccatgtctttctccaactcatttatctctagatccttcataatagt 40419798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 26016696 - 26016596
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||| || |||||||| ||||||| |||||| | ||||||| || ||| ||||||||||||  | ||||||||||||||||| ||||||||||    
T  26016696 cactaagtgggctcagctacatgtatcaaacgacgccacaatgttctaccaaaaaccatgtttttctctaactcatttatctctagatcattcctaatag 26016597  T
Q  101 t 101  Q
    |    
T  26016596 t 26016596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 7083149 - 7083049
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||   |||| ||||||| | ||||| |||||||| ||| || ||||||    
T  7083149 cactaagcggggtcagctacatgaatcaaacgacgccatagtgttctatcataaccgatgtctttctccaactcattaatctctagttccatcttaatag 7083050  T
Q  101 t 101  Q
    |    
T  7083049 t 7083049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 52532639 - 52532739
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||| ||| ||| ||||  ||| | ||||| || |||| ||| ||||||||||    
T  52532639 cactaagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaatttctaaatctttcctaatag 52532738  T
Q  101 t 101  Q
    |    
T  52532739 t 52532739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 50806926 - 50806862
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgttttt 65  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| |||||    
T  50806926 cactaaatggggtcggttacatgaatcaaacaacgccatagtgttttatcataaaccatattttt 50806862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 51585002 - 51584935
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctcc 69  Q
    ||||||||||||| |||||||||||||||||| | ||||||||||||||| |||  |||| |||||||    
T  51585002 actaagtggggtctgctacatgaatcaaacaatgtcatagtgttctatcaaaaacaatgtctttctcc 51584935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1211004 - 1210954
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  1211004 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 1210954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 25979254 - 25979304
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  25979254 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 25979304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 29577511 - 29577461
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  29577511 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 29577461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30202153 - 30202203
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  30202153 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 30202203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 37311778 - 37311828
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  37311778 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 37311828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38869141 - 38869091
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  38869141 cactaagtggggtcggctacatggatcaaacgacgccataatgttctatca 38869091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39140774 - 39140720
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaa 55  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||||||| ||||    
T  39140774 cactaagtggggtcggctacatgaatcaaattacgccataatgttctatctgaaa 39140720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43240402 - 43240452
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  43240402 cactaagtgaggtcggctacatgaatcaaatgacgccatagtgttctatca 43240452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 44941799 - 44941849
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  44941799 cactaagtggggtcggctacatggatcaaattacgccatagtgttctatca 44941849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 49347416 - 49347466
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  49347416 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 49347466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10272515 - 10272417
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||||||||||||||||| || ||   ||||||||||| ||| || || ||||||| | | ||| || |||||||||||| ||||||    
T  10272515 cactaagtggggtcggctacatgaatcaaacgacacc--ggtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttcttaatag 10272418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8796468 - 8796368
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||||||||| || |||  |||||||| |||||||||| ||| ||| |||   ||| ||||||| || |||||||| ||| ||||||    
T  8796468 cactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcattaatatctagatctttcttaatag 8796369  T
Q  101 t 101  Q
    |    
T  8796368 t 8796368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28511824 - 28511887
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttt 64  Q
    ||||||||||||||||||||||  ||||||  |||||||| |||||||||| ||| ||||||||    
T  28511824 cactaagtggggtcggctacattgatcaaattacgccataatgttctatcataaaccatgtttt 28511887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 34792375 - 34792422
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||    
T  34792375 taagtggggtcggctacatggatcaaatgacgccatagtgttctatca 34792422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4707244 - 4707293
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  4707244 cactaagtggggtcggctacatg-atcaaattacgccatagtgttctatca 4707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13578925 - 13578975
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||| |||||||| ||||||||||| ||| |||||||||||||||    
T  13578925 cactaagtggagtcggctatatgaatcaaacgacgtcatagtgttctatca 13578975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 15437151 - 15437201
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||||||    
T  15437151 cactatgtggggttggctacatgaatcaaacgacaccatagtgttctatca 15437201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21769734 - 21769784
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  21769734 cactaagtggggtcggctacatggatcaaattacgccataatgttctatca 21769784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28090717 - 28090767
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  28090717 cactaagtggggtcggctacatggatcaaattacgccataatgttctatca 28090767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28533726 - 28533676
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  28533726 cactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatca 28533676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38807694 - 38807744
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| | ||||  |||||||||||||||||||    
T  38807694 cactaagtggggtcggctacatggaacaaattacgccatagtgttctatca 38807744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41560488 - 41560438
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  41560488 cactaagtggggtcggctacatggatcaaattacgccataatgttctatca 41560438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44751743 - 44751693
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||| ||||||||||||| ||||||  |||||||||||||||||||    
T  44751743 cactaagtgaggtcggctacatggatcaaatgacgccatagtgttctatca 44751693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51440788 - 51440838
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||| |||||||||||||  ||||| |||||||||||||    
T  51440788 cactaagtggggtcggttacatgaatcaaatgacgccgtagtgttctatca 51440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52921339 - 52921289
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||| ||||||||||||||    
T  52921339 cactaagtggggtcggctacatggatcaaatgacgcaatagtgttctatca 52921289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8203157 - 8203206
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    ||||||||||||||||||||||| || || |||||||||| |||||||||    
T  8203157 cactaagtggggtcggctacatggataaatcaacgccataatgttctatc 8203206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 37263617 - 37263532
Alignment:
Q  1 cactaagtggggtcggctacatgaatc-aaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctcta 85  Q
    ||||||||||||  |||||| |||||  |||| ||||||||||||||||||| ||| ||||| ||||||| | ||||| |||||||    
T  37263617 cactaagtggggctggctacgtgaatttaaacgacgccatagtgttctatcaaaaatcatgtgtttctccaactcattgatctcta 37263532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37462899 - 37462947
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||    
T  37462899 cactaagtggggtcggctacatggatcaaattacgccataatgttctat 37462947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2001149 - 2001188
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccata 40  Q
    ||||||||| |||| |||||||||||||||||||||||||    
T  2001149 cactaagtgaggtctgctacatgaatcaaacaacgccata 2001188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2429652 - 2429707
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaa 56  Q
    |||||||||||||||||||| || ||||||  |||||||| |||||||||| ||||    
T  2429652 cactaagtggggtcggctacgtggatcaaattacgccataatgttctatcataaaa 2429707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 9592990 - 9592943
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||| ||||||  |||| ||||||||||||||    
T  9592990 taagtggggtcggctacatggatcaaatgacgctatagtgttctatca 9592943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40568433 - 40568496
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttt 64  Q
    ||||||||||||| ||||||||| ||||||  |||||||||| |||||||| ||| ||| ||||    
T  40568433 cactaagtggggttggctacatggatcaaattacgccatagttttctatcataaaccatatttt 40568496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 4029381 - 4029331
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||   |||||||||||| |||||    
T  4029381 cactaagtggggtcggctacatggatcaaatgtcgccatagtgttatatca 4029331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4590555 - 4590605
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || ||||| ||||||||||    
T  4590555 cactaagtggggtcggctacatggatcaaattacaccatattgttctatca 4590605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5114002 - 5113952
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| || ||||||||||||||||||||  ||| |||||||||||||||    
T  5114002 cactaattgaggtcggctacatgaatcaaatgacgtcatagtgttctatca 5113952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14225859 - 14225909
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||| |||||||||| ||||||| || ||||| ||||||||||    
T  14225859 cactaagtggggccggctacatggatcaaacgacaccatactgttctatca 14225909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15086181 - 15086131
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  ||| |||||||||||||||    
T  15086181 cactaagtggggttggctacatggatcaaatgacgtcatagtgttctatca 15086131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17269012 - 17269062
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| |||||||||||||||| ||||||  |||||||| ||||||||||    
T  17269012 cactaaatggggtcggctacatggatcaaattacgccataatgttctatca 17269062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 17640108 - 17640190
Alignment:
Q  19 acatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    ||||||||||||| |||||||| |||||||| | ||   || ||||| ||| | ||||| ||||||||||||||||| |||||    
T  17640108 acatgaatcaaacgacgccataatgttctattacaagcaatatttttatccaactcattaatctctagatccttccttatagt 17640190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22090355 - 22090305
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||| |||||||||||||||||| ||||||  ||| |||||||||||||||    
T  22090355 cacttagtggggtcggctacatggatcaaatgacgtcatagtgttctatca 22090305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27704209 - 27704159
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||| ||||||||||||||| ||||||  |||||||| ||||||||||    
T  27704209 cactaagcggggtcggctacatggatcaaattacgccataatgttctatca 27704159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30445364 - 30445314
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||| || ||||||||||||||||| ||| ||| |||||||||||    
T  30445364 cactaagtggagttggctacatgaatcaaacgacgtcatggtgttctatca 30445314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 32404549 - 32404611
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgttt 63  Q
    ||||||||||||||||||||||| ||||||  |||||||  |||| ||||| ||| |||||||    
T  32404549 cactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgttt 32404611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 42337815 - 42337765
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  | |||||||||||||||||    
T  42337815 cactaagtggggttggctacatggatcaaatgatgccatagtgttctatca 42337765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48861398 - 48861448
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||| ||||||||||||| ||| |||| || |||||||    
T  48861398 cactaagtggggtcggcgacatgaatcaaacgacgtcataatgctctatca 48861448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 49377560 - 49377510
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| ||| |||||||||||| |||||||| ||||||| ||||||||||    
T  49377560 cactaactggagtcggctacatggatcaaacaccgccataatgttctatca 49377510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 6641367 - 6641286
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctcta 85  Q
    ||||||| ||||  |||||||||||||| ||||||||||||| ||||  ||| ||||  ||||||  | |||||||||||||    
T  6641367 taagtggcgtcgcttacatgaatcaaacgacgccatagtgttttatcgaaaatcatgcctttctcaaactcatttatctcta 6641286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 8392030 - 8391981
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||| ||||||||| ||||||  |||||||||| ||||||||    
T  8392030 actaagtggggttggctacatggatcaaatgacgccatagtattctatca 8391981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38877366 - 38877415
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    ||||||||||| ||||||||||| ||||||  |||||||| |||||||||    
T  38877366 cactaagtgggttcggctacatggatcaaatgacgccataatgttctatc 38877415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 39318379 - 39318338
Alignment:
Q  10 gggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| ||||||  |||||||||||||||||||    
T  39318379 gggtcggctacatggatcaaattacgccatagtgttctatca 39318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 43028831 - 43028876
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttc 46  Q
    |||||||||||||||  |||||||||||||| || |||||||||||    
T  43028831 cactaagtggggtcgcttacatgaatcaaacgacaccatagtgttc 43028876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 50676534 - 50676583
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| |||||||||||||||| |||| | |||||| |||||    
T  50676534 actaagtggggtcagctacatgaatcaaactacgctacagtgttatatca 50676583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2544852 - 2544804
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||||||||    
T  2544852 cactaagtggggtcggctacatggatcaaattatgccataatgttctat 2544804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6025864 - 6025776
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatc 89  Q
    ||||||||||  ||||||||||| ||||||  |||||||  |||||||||||| | ||| ||| | ||| | ||||| |||||||||||    
T  6025864 cactaagtggaatcggctacatggatcaaatgacgccatcatgttctatcagataccatatttctatccaactcattaatctctagatc 6025776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 14224343 - 14224276
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctcc 69  Q
    |||||||| ||||||||| ||||||| |||  ||||||||||| ||||||| ||| ||||| |||||||    
T  14224343 cactaagtagggtcggctgcatgaat-aaatgacgccatagtggtctatcaaaaaccatgtctttctcc 14224276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26299327 - 26299287
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatag 41  Q
    ||||||||||||||||||||||| ||||||  |||||||||    
T  26299327 cactaagtggggtcggctacatggatcaaattacgccatag 26299287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29808115 - 29808051
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgttttt 65  Q
    ||||||||||  ||||||||||||||||||   |||||||||||| ||||| ||| ||| |||||    
T  29808115 cactaagtggaatcggctacatgaatcaaatgtcgccatagtgttttatcaaaaaccatattttt 29808051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 7513427 - 7513508
Alignment:
Q  16 gctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaa 97  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| | ||||| |||||||||||||||||||    
T  7513427 gctacatgaatcaaacaacgccatagtgttctatcaaaaaccatgtctttctccaactcattcatctctagatccttcctaa 7513508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10617257 - 10617354
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaat 98  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||| ||||| ||||||| | ||||| ||||||||||||||| ||||    
T  10617257 cactaagtggggccggctacataaatcaaacaacgccaaagtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaat 10617354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 39018 - 38922
Alignment:
Q  13 tcggctacatgaatcaaacaacgccatagtgttcta--------tcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    ||||||||||||||||||||||||||||||||||||        ||| ||| ||||| ||||||| | |||||||||||||||||||||||||||||    
T  39018 tcggctacatgaatcaaacaacgccatagtgttctatcaaaaagtcaaaaaccatgtctttctccaactcatttatctctagatccttcctaatagt 38922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 12890834 - 12890784
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  12890834 cactaagtggggtcggctacatggatcaaattacgccatagtgttctatca 12890784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31819090 - 31819040
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  31819090 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 31819040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33084188 - 33084138
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||||||    
T  33084188 cactaagtagggtcggctacatgaatcaaacgacgccatagtattctatca 33084138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3206482 - 3206530
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  3206482 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctat 3206530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 9707029 - 9706933
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaa 97  Q
    ||||||||||||||||||||||| ||||||  | ||||||||||||||||| ||| ||| |||   ||| | ||||| | ||||| |||||||||||    
T  9707029 cactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcattaacctctaaatccttcctaa 9706933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8364815 - 8364753
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgttt 63  Q
    ||||||| ||||||||||||||| ||||||  |||||||| |||||||||| ||| |||||||    
T  8364815 cactaagcggggtcggctacatggatcaaattacgccataatgttctatcataaaccatgttt 8364753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28085635 - 28085585
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || ||||||||||||||||    
T  28085635 cactaagtggggtcggctacatggatcaaatgacaccatagtgttctatca 28085585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30031515 - 30031465
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||| ||||||||||||| ||||||  |||||||||||||||||||    
T  30031515 cactaagtgaggtcggctacatggatcaaattacgccatagtgttctatca 30031465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32756180 - 32756130
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||| ||||||||||| ||||||  |||||||||||||||||||    
T  32756180 cactaagtgggatcggctacatggatcaaatgacgccatagtgttctatca 32756130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34934853 - 34934903
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  | |||||||||||||||||    
T  34934853 cactaagtggggtcggctacatggatcaaatgaggccatagtgttctatca 34934903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 3074502 - 3074573
Alignment:
Q  17 ctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatc 89  Q
    ||||||||||||||||||| |||||||||| ||| |||| || || ||||||| | ||||||| |||||||||    
T  3074502 ctacatgaatcaaacaacgacatagtgttc-atccgaaatcacgtctttctccaactcatttaactctagatc 3074573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 10453312 - 10453272
Alignment:
Q  11 ggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  10453312 ggtcggctacatgaatcaaaagacgccatagtgttctatca 10453272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 34143791 - 34143838
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||| ||||||| ||||||  |||||||||||||||||||    
T  34143791 taagtggggtcgactacatggatcaaatgacgccatagtgttctatca 34143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 34156407 - 34156454
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||| ||||||| ||||||  |||||||||||||||||||    
T  34156407 taagtggggtcgactacatggatcaaatgacgccatagtgttctatca 34156454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34528 - 34578
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| |||||||| ||||||  |||||||| ||||||||||    
T  34528 cactaagtggggtcagctacatggatcaaattacgccataatgttctatca 34578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 21089656 - 21089606
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||| | |||||||| ||||||||| |||||| ||||||||||    
T  21089656 cactaagtgggggcagctacatggatcaaacaatgccataatgttctatca 21089606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 7080584 - 7080511
Alignment:
Q  16 gctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatc 89  Q
    |||||||||||||||  ||| ||||| || |||||| ||| ||||| ||||||||| ||||| |||| ||||||    
T  7080584 gctacatgaatcaaattacgtcatagagtcctatcaaaaatcatgtatttctccgattcattaatctttagatc 7080511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5258171 - 5258215
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgtt 45  Q
    |||||||||||||||||||| || ||||||  |||||||||||||    
T  5258171 cactaagtggggtcggctacgtggatcaaatgacgccatagtgtt 5258215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 31818788 - 31818740
Alignment:
Q  3 ctaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||| ||||||  ||| |||| ||||||||||    
T  31818788 ctaagtggggtcggctacatggatcaaattacgacataatgttctatca 31818740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 4e-21; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27893348 - 27893248
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||| ||| ||||| ||||||| | ||||| |||||||| |||||  ||||||    
T  27893348 cactaagtgggatcggctacatgaatcaaacaatgccatagtgttctttcaaaaatcatgtctttctccaactcattaatctctaggtcctttttaatag 27893249  T
Q  101 t 101  Q
    |    
T  27893248 t 27893248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31454248 - 31454338
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatcct 91  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||||| ||| ||||| ||||||| | ||||| || ||||||||||    
T  31454248 cactaagtggggtcggctaaatgaatcaaatgacgccatagtgttctatcaaaaaccatgtctttctccaattcattaatatctagatcct 31454338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 3987589 - 3987525
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctcc 69  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||| ||| ||||| |||||||    
T  3987589 aagtggggtcgggtacatgaatcaaacaacgccatagtgtcctatcaaaaaccatgtctttctcc 3987525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 379 - 457
Target Start/End: Original strand, 52013195 - 52013273
Alignment:
Q  379 cttgtatacaggttaggcatgcccaaggagttcataatgtagaaggagaaaagaaccatgatgcttacttatcttatga 457  Q
    ||||||| |||||||| |||||||||||  |||| ||||| |||||||| ||||||| |||||| ||||||||||||||    
T  52013195 cttgtatgcaggttagacatgcccaagggtttcacaatgttgaaggagacaagaaccctgatgcgtacttatcttatga 52013273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 31452984 - 31453076
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    |||||||||||||| |||||||||||||||| |||||||||| || | ||| ||| ||||| |||| || | ||||| || ||||||||||||    
T  31452984 cactaagtggggtctgctacatgaatcaaacgacgccatagtattatgtcaaaaaccatgtctttcaccaattcattaatatctagatccttc 31453076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37351666 - 37351578
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatc 89  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||| || ||| ||| | |||||||   ||||| |||||||||||    
T  37351666 cactaagtggggtcggctacatgaatcaaacgacgtcgtagtgttctaacaaaaaccatatctttctccatctcattaatctctagatc 37351578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 311332 - 311382
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  311332 cactaagtggggtcggctacatgtatcaaatgacgccatagtgttctatca 311382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 5169091 - 5169041
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  5169091 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 5169041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12096728 - 12096778
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  12096728 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 12096778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 40273228 - 40273278
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  40273228 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 40273278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47233619 - 47233669
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  47233619 cactaactggggtcggctacatgaatcaaatgacgccatagtgttctatca 47233669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48508494 - 48508444
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  48508494 cactaagtggggtcggctacatggatcaaattacgccatagtgttctatca 48508444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 52139059 - 52139009
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||||||||    
T  52139059 cactaagtggggtcggctacatggatcaaataacgtcatagtgttctatca 52139009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26990471 - 26990380
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtg-ttctatc-agaaaacatgtttttctccgagtcatttatctctagatccttc 93  Q
    |||||||||||||||||||| ||||||||||||   ||| ||| ||||||| | ||||||||| ||||||| | ||||| |||||||||||||||    
T  26990471 cactaagtggggtcggctacgtgaatcaaacaa---catcgtgtttctatcaaaaaaacatgtctttctccaactcattgatctctagatccttc 26990380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 49042192 - 49042140
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaac 57  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||| |||||    
T  49042192 aagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaac 49042140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 2340741 - 2340840
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    |||||||||||| |||| |||| |||||||||||||||| |||||||||| | | |||     ||||||| ||||| ||||||||||| ||| |||||||    
T  2340741 actaagtggggttggcttcatggatcaaacaacgccataatgttctatcatatatcattaccctctccgactcattaatctctagatctttcttaatagt 2340840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 7895906 - 7895953
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||| ||||||  |||||||||||||||||||    
T  7895906 taagtggggtcggctacatggatcaaatgacgccatagtgttctatca 7895953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 36304220 - 36304125
Alignment:
Q  6 agtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatagt 101  Q
    |||||||||||||||||| ||||||  |||||||| ||| |||||| ||| ||| ||||  ||| | ||||| ||||||||||| ||| |||||||    
T  36304220 agtggggtcggctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagt 36304125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22331 - 22281
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||  ||||||  |||||||||||||||||||    
T  22331 cactaagtggggtcggctacatagatcaaatgacgccatagtgttctatca 22281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 659784 - 659734
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||||  |||||| ||||||||||    
T  659784 cactaagtggggtcggctacatggatcaaacactgccataatgttctatca 659734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31566184 - 31566234
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || ||||||||||||||||    
T  31566184 cactaagtggggtcggctacatggatcaaatgacaccatagtgttctatca 31566234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38060973 - 38060923
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||||||| |||||||||||    
T  38060973 cactaagtggggtcggctacatggatcaaattacgccatggtgttctatca 38060923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 46148287 - 46148237
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||||||||||    
T  46148287 cactaagtggggtcggctacatggatcaaattacgccataatgttctatca 46148237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 47555355 - 47555405
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| ||||||||| ||||||  |||||||||||||||||||    
T  47555355 cactaagtggggttggctacatggatcaaatgacgccatagtgttctatca 47555405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 51447740 - 51447790
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| ||||| |||||||||||||||||  |||||||||||||||||||    
T  51447740 cactaaatggggccggctacatgaatcaaatgacgccatagtgttctatca 51447790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 52156107 - 52156157
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| |||| |  |||||||||||||||||||    
T  52156107 cactaagtggggtcggctacatggatcagatgacgccatagtgttctatca 52156157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 53262400 - 53262350
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||  ||||||  |||||||||||||||||||    
T  53262400 cactaagtggggtcggctacatagatcaaatgacgccatagtgttctatca 53262350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 53519839 - 53519789
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  53519839 cactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatca 53519789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 38850379 - 38850330
Alignment:
Q  2 actaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  38850379 actaagtggggtcggctacatggatcaaattacgtcatagtgttctatca 38850330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41530020 - 41529975
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttc 46  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||    
T  41530020 cactaagtggggtcggctacatggatcaaattacgccatagtgttc 41529975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 35033395 - 35033355
Alignment:
Q  11 ggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  35033395 ggtcggctacatggatcaaataacgccatagtgttctatca 35033355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 42026565 - 42026609
Alignment:
Q  7 gtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||    
T  42026565 gtggggtcggctaaatgaatcaaataacgccataatgttctatca 42026609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25191636 - 25191573
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttt 64  Q
    ||||||||||| || |||||||| ||||||  ||||||||||||||||||| ||| ||| ||||    
T  25191636 cactaagtgggatcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttt 25191573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 42510041 - 42510136
Alignment:
Q  3 ctaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaat 98  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||| |||| ||| ||| ||||  ||| | |||||||| || | ||| ||||||||    
T  42510041 ctaagtggggtcggctacatggatcaaattacgccataatgttcaatcataaaccatattttggtccaactcatttatttccaaatctttcctaat 42510136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48532217 - 48532166
Alignment:
Q  1 cactaagtggggtcggctaca-tgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||| || ||||||  |||||||||||||||||||    
T  48532217 cactaagtggggtcggctacattggatcaaatgacgccatagtgttctatca 48532166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 2133635 - 2133685
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||  |||||| ||||||  |||||||||||||||||||    
T  2133635 cactaagtggggtcgagtacatggatcaaatcacgccatagtgttctatca 2133685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 24778632 - 24778682
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  || ||||| ||||||||||    
T  24778632 cactaagtggggtcggctacatggatcaaattacaccataatgttctatca 24778682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 41971293 - 41971343
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||| || ||||||||| ||||||||||| |||| ||||||||||    
T  41971293 cactaagtggagttggctacatggatcaaacaacgtcataatgttctatca 41971343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48734170 - 48734232
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgttt 63  Q
    |||||||||||||| |||||||| |||||   |||||||| |||||||||| ||| |||||||    
T  48734170 cactaagtggggtcagctacatggatcaacttacgccataatgttctatcataaaccatgttt 48734232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50631904 - 50631954
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| |||| |||||||||||||| | |||| ||||||||||    
T  50631904 cactaagtggggttggctgcatgaatcaaacaatggcataatgttctatca 50631954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24541355 - 24541404
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    |||||||||||||||| |||||| ||||||  |||||||| |||||||||    
T  24541355 cactaagtggggtcgggtacatggatcaaattacgccataatgttctatc 24541404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 45373392 - 45373359
Alignment:
Q  18 tacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||| |||||||||||||||||||    
T  45373392 tacatgaatcaaacgacgccatagtgttctatca 45373359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 46140662 - 46140617
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatc 50  Q
    ||||||||||| ||||||| |||||||||| ||||| |||||||||    
T  46140662 aagtggggtcgactacatggatcaaacaactccataatgttctatc 46140617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 15296166 - 15296066
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccgagtcatttatctctagatccttcctaatag 100  Q
    ||||||||||||||||| ||||| ||||||  || ||||| ||||||||| |||| ||| |||   ||| | ||||| | ||||| ||| ||||||||||    
T  15296166 cactaagtggggtcggccacatggatcaaattacaccataatgttctatccgaaatcatatttggatccaattcattaacctctaaatctttcctaatag 15296067  T
Q  101 t 101  Q
    |    
T  15296066 t 15296066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 28245696 - 28245648
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctat 49  Q
    ||||||||||| ||||||||||| ||||||  ||| |||||||||||||    
T  28245696 cactaagtgggatcggctacatggatcaaatgacgtcatagtgttctat 28245648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 590 - 540
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  590 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28912 - 28962
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  28912 cactaagtggggtcggctacatggatcaaatgacgccatagtgttctatca 28962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 82974 - 82927
Alignment:
Q  4 taagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||||||||||||| ||||||  ||| |||||||||||||||    
T  82974 taagtggggtcggctacatggatcaaatgacgtcatagtgttctatca 82927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 4891 - 4845
Alignment:
Q  5 aagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||||||| | ||||||  |||||||||||||||||||    
T  4891 aagtggggtcggctacacggatcaaattacgccatagtgttctatca 4845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 971 - 1021
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| ||||||| |||||||| ||||||  |||||||||||||||||||    
T  971 cactaaatggggtcagctacatggatcaaatgacgccatagtgttctatca 1021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16837 - 16787
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||||||| |||||||||||  ||||||  |||||||||||||||||||    
T  16837 cactaagtggagtcggctacatagatcaaatgacgccatagtgttctatca 16787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 160347 - 160397
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    ||||||||||||| |||||||||| |||||  |||||||| ||||||||||    
T  160347 cactaagtggggttggctacatgattcaaattacgccataatgttctatca 160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 163217 - 163267
Alignment:
Q  1 cactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatca 51  Q
    |||||| ||| |||||||| ||||||||||| ||| |||||||||||||||    
T  163217 cactaaatggagtcggctatatgaatcaaacgacgtcatagtgttctatca 163267  T

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