View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9026_low_19 (Length: 538)

Name: NF9026_low_19
Description: NF9026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9026_low_19
NF9026_low_19
[»] chr1 (11 HSPs)
chr1 (249-523)||(17479723-17479991)
chr1 (376-523)||(17479393-17479540)
chr1 (134-255)||(47051558-47051682)
chr1 (377-455)||(16100148-16100226)
chr1 (134-220)||(16099788-16099873)
chr1 (240-313)||(17479537-17479610)
chr1 (249-351)||(47051320-47051421)
chr1 (16-65)||(47051751-47051800)
chr1 (134-205)||(17654449-17654519)
chr1 (304-351)||(16100082-16100129)
chr1 (407-472)||(17654090-17654155)
[»] chr4 (11 HSPs)
chr4 (386-523)||(11513393-11513529)
chr4 (134-255)||(27562171-27562295)
chr4 (145-271)||(54352822-54352952)
chr4 (399-455)||(54352549-54352605)
chr4 (134-205)||(4764567-4764637)
chr4 (400-472)||(4764191-4764264)
chr4 (400-472)||(18694861-18694934)
chr4 (134-205)||(18695243-18695313)
chr4 (304-351)||(54352623-54352670)
chr4 (400-472)||(27734414-27734487)
chr4 (16-52)||(5742764-5742800)
[»] chr3 (9 HSPs)
chr3 (148-255)||(19434044-19434154)
chr3 (399-455)||(5706249-5706305)
chr3 (134-205)||(6912410-6912480)
chr3 (249-351)||(19434291-19434392)
chr3 (400-472)||(6912028-6912101)
chr3 (249-297)||(5706383-5706431)
chr3 (249-351)||(11199970-11200071)
chr3 (382-472)||(11200098-11200190)
chr3 (315-351)||(5706363-5706399)
[»] chr2 (9 HSPs)
chr2 (134-255)||(39155672-39155796)
chr2 (23-65)||(809897-809939)
chr2 (134-205)||(809756-809826)
chr2 (400-470)||(45331289-45331360)
chr2 (134-205)||(15001783-15001856)
chr2 (248-296)||(2587472-2587520)
chr2 (158-198)||(9312388-9312428)
chr2 (16-52)||(27561100-27561136)
chr2 (16-52)||(37457541-37457577)
[»] chr5 (4 HSPs)
chr5 (145-220)||(5520495-5520567)
chr5 (377-455)||(5520184-5520262)
chr5 (16-65)||(42784416-42784465)
chr5 (134-205)||(15597676-15597747)
[»] chr8 (5 HSPs)
chr8 (16-65)||(4707704-4707753)
chr8 (134-205)||(4707565-4707635)
chr8 (134-204)||(26341511-26341579)
chr8 (400-472)||(26341173-26341246)
chr8 (400-472)||(26917984-26918057)
[»] scaffold0713 (4 HSPs)
scaffold0713 (134-223)||(8-93)
scaffold0713 (134-223)||(4144-4229)
scaffold0713 (407-472)||(221-286)
scaffold0713 (407-472)||(4357-4422)
[»] scaffold0406 (1 HSPs)
scaffold0406 (134-205)||(2694-2764)
[»] chr6 (6 HSPs)
chr6 (143-223)||(33062078-33062154)
chr6 (134-205)||(9821699-9821769)
chr6 (134-205)||(25479341-25479411)
chr6 (400-472)||(33062447-33062520)
chr6 (408-472)||(9814247-9814311)
chr6 (408-472)||(9822087-9822151)
[»] scaffold0002 (1 HSPs)
scaffold0002 (410-472)||(413580-413640)
[»] scaffold0438 (4 HSPs)
scaffold0438 (143-205)||(8689-8750)
scaffold0438 (134-204)||(11672-11740)
scaffold0438 (400-472)||(8353-8426)
scaffold0438 (400-472)||(11334-11407)
[»] scaffold0654 (2 HSPs)
scaffold0654 (407-472)||(4383-4448)
scaffold0654 (407-472)||(5737-5802)
[»] chr7 (1 HSPs)
chr7 (134-202)||(28802619-28802687)
[»] scaffold0014 (1 HSPs)
scaffold0014 (408-470)||(115689-115751)


Alignment Details
Target: chr1 (Bit Score: 139; Significance: 2e-72; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 249 - 523
Target Start/End: Original strand, 17479723 - 17479991
Alignment:
Q  249 aaatagagatttaattgcatatattttgtacactagttttgatatgttcctaaaaactagttttgcctagttttgatattgtctaaagcatggttttgga 348  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||||||||||    
T  17479723 aaatggagatttgattgcatatattttgtgcactagttttgatatgttcctaaaatctagttttgactagttttgatatgttctaaagcatggttttgga 17479822  T
Q  349 attatgnnnnnnnnnnnnattttaaaatttggcatttatatgtactcgtagtggatttgatttggatttacttatgactacaagtggtagaatttcaatt 448  Q
    ||| ||                 | | ||||| |||||||||||||||  |||||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  17479823 attgtgtttttttccga------agattttggtatttatatgtactcgatgtggattttatttggatttacttttgactacaagtggtagattttcaatt 17479916  T
Q  449 gagtttttatggtacatattttgatccgatatgttgaaaaatatggtttgtgagatgttttgagaatttgttttg 523  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  17479917 gagttttgatggtacatattttgatccgatatgttggaaaatatggtttgtaagacgttttgagaatttgttttg 17479991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 376 - 523
Target Start/End: Complemental strand, 17479540 - 17479393
Alignment:
Q  376 tttggcatttatatgtactcgtagtggatttgatttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttgatcc 475  Q
    ||||| |||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  17479540 tttggtatttatatgtactcgatgtggatttgatttggatttacttgtgactacaagtggtagattttcaattgagttttgatggtacatattttgatcc 17479441  T
Q  476 gatatgttgaaaaatatggtttgtgagatgttttgagaatttgttttg 523  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  17479440 gatatgttggaaaatatggtttgtaagacgttttgagaatttgttttg 17479393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 47051682 - 47051558
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttgaa------tatga 227  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||      |||||    
T  47051682 aaatggggaacacaccctttgaacatttttcttctcattgatacttatgtttaaagtcatcgatatta---ttatggtctctatttgaatttatctatga 47051586  T
Q  228 cttattgagcaaatggtttgaaaataga 255  Q
    ||||||||||||||| ||||||||||||    
T  47051585 cttattgagcaaatgatttgaaaataga 47051558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 377 - 455
Target Start/End: Original strand, 16100148 - 16100226
Alignment:
Q  377 ttggcatttatatgtactcgtagtggatttgatttggatttacttatgactacaagtggtagaatttcaattgagtttt 455  Q
    |||| ||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  16100148 ttggtattaatatgtactcgatgtggatttgatttggatttacttatgactacaagtggtagattttcgattgagtttt 16100226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 16099788 - 16099873
Alignment:
Q  134 aaatgggacacacaccctttggacatttt--tcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttg 220  Q
    |||||||  |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  16099788 aaatggggaacacaccctttgaacatttttttcttctcattgatacttatgtttaaagtcatcga---tattattatggtctctatttg 16099873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 240 - 313
Target Start/End: Complemental strand, 17479610 - 17479537
Alignment:
Q  240 atggtttgaaaatagagatttaattgcatatattttgtacactagttttgatatgttcctaaaaactagttttg 313  Q
    |||||||  |||| ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  17479610 atggttttgaaatggagatttgattgcatatattttgtgcactagttttgatatgttcctaaaatctagttttg 17479537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 351
Target Start/End: Complemental strand, 47051421 - 47051320
Alignment:
Q  249 aaatagagatttaattgcatatattttgtacactagttttgatatgttcctaaaaactagttttgcctagttttgatattgtctaaagcatggttttgga 348  Q
    |||| ||||||| |||||||||||| ||| || |||||||||||||||||| | |||||| |||| |||||||||||||  | |||||||| |||||| |    
T  47051421 aaatggagatttgattgcatatattgtgtgcaatagttttgatatgttcct-acaactagatttgactagttttgatatgttgtaaagcatagttttgaa 47051323  T
Q  349 att 351  Q
    |||    
T  47051322 att 47051320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 47051800 - 47051751
Alignment:
Q  16 catcacaaggaattgagttctttcgtcatatctgtgagttgatgacgatc 65  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  47051800 catcactaggaattgagttctttcgtcatatctgtgagttgataacgatc 47051751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 17654519 - 17654449
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| || |||||||||||| |||| || ||||||||||||||||||||||||||    
T  17654519 aaatggggaacacaccctttgaac-tttttcttctcaatgatgctcatgtttaaagtcatcgatattattat 17654449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 351
Target Start/End: Original strand, 16100082 - 16100129
Alignment:
Q  304 actagttttgcctagttttgatattgtctaaagcatggttttggaatt 351  Q
    |||||| ||| |||||||||||||  ||||||||||||||||||||||    
T  16100082 actagtgttgactagttttgatatgttctaaagcatggttttggaatt 16100129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 472
Target Start/End: Complemental strand, 17654155 - 17654090
Alignment:
Q  407 gatttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||||||||||||| || |||| || || |||| |||||||||| ||| ||| ||||||||    
T  17654155 gatttggatttacttatgattataagtagtggattttcgattgagttttgatgatacgtattttga 17654090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 11513529 - 11513393
Alignment:
Q  386 atatgtactcgtagtggatttgatttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttgatccgatatgttga 485  Q
    |||||||||||  |||||||||||||| ||||||||||||||| |||||||||| ||| |||||| |||| |||||||||||||||||||||||||||||    
T  11513529 atatgtactcgacgtggatttgatttgaatttacttatgactataagtggtagatttttaattga-ttttgatggtacatattttgatccgatatgttga 11513431  T
Q  486 aaaatatggtttgtgagatgttttgagaatttgttttg 523  Q
    ||||||||||||| ||||  ||||||||||||||||||    
T  11513430 aaaatatggtttgggagacattttgagaatttgttttg 11513393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 27562295 - 27562171
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttgaa------tatga 227  Q
    |||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |      |||||    
T  27562295 aaatggggaacacgccctttgaacatttttcttctcattgatacttatgtttaaagtcatcgatatta---ttatggtctctatttggatttatctatga 27562199  T
Q  228 cttattgagcaaatggtttgaaaataga 255  Q
    ||||||||||||||| ||||||||||||    
T  27562198 cttattgagcaaatgatttgaaaataga 27562171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 145 - 271
Target Start/End: Complemental strand, 54352952 - 54352822
Alignment:
Q  145 acaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttgaa------tatgacttattga-gc 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |      |||||||||||||       
T  54352952 acaccctttgaacatttttcttctcattgatacttatgtttaaagtcatcgatatta---ttatggtctctatttggatttatctatgacttattgatta 54352856  T
Q  238 aaatggtttgaaaatagagatttaattgcatata 271  Q
    ||||| ||||||||||||| ||| ||||||||||    
T  54352855 aaatgatttgaaaatagaggtttgattgcatata 54352822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 54352605 - 54352549
Alignment:
Q  399 gtggatttgatttggatttacttatgactacaagtggtagaatttcaattgagtttt 455  Q
    ||||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  54352605 gtggatttgatttggatttacttatgactacaagtggtagatttccgattgagtttt 54352549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 4764637 - 4764567
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| || |||||||||||| |||| || ||||||||||||||||||||||||||    
T  4764637 aaatggggaacacaccctttgaac-tttttcttctcaatgatgctcatgtttaaagtcatcgatattattat 4764567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 4764264 - 4764191
Alignment:
Q  400 tggatttga-tttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||| ||||||||||||||||| || |||| ||||| |||| |||||||||| ||| ||| ||||||||    
T  4764264 tggatttgaatttggatttacttatgattataagtagtagattttcgattgagttttgatgatacgtattttga 4764191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 18694934 - 18694861
Alignment:
Q  400 tggatttga-tttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||| ||||||||||||||||| || |||| ||||| |||| |||||||||| ||| ||| ||||||||    
T  18694934 tggatttgaatttggatttacttatgattataagtagtagattttcgattgagttttgatgatacgtattttga 18694861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 18695313 - 18695243
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| || |||||||| ||| |||| ||  |||||||||||||||||||||||||    
T  18695313 aaatggggaacacaccctttgaac-tttttcttatcaatgatgctcgtgtttaaagtcatcgatattattat 18695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 351
Target Start/End: Complemental strand, 54352670 - 54352623
Alignment:
Q  304 actagttttgcctagttttgatattgtctaaagcatggttttggaatt 351  Q
    |||||| ||| |||||||||||||  ||||||||||||||||||||||    
T  54352670 actagtgttgactagttttgatatgttctaaagcatggttttggaatt 54352623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 27734487 - 27734414
Alignment:
Q  400 tggatttg-atttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    |||||||| |||||||||||||||||| || |||| ||||| |||| |||||||||| ||| ||| ||| ||||    
T  27734487 tggatttgcatttggatttacttatgattataagtagtagattttcgattgagttttgatgatacgtatcttga 27734414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 5742800 - 5742764
Alignment:
Q  16 catcacaaggaattgagttctttcgtcatatctgtga 52  Q
    |||||| |||||||||||||||||||||||| |||||    
T  5742800 catcactaggaattgagttctttcgtcatatatgtga 5742764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 1e-30; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 19434044 - 19434154
Alignment:
Q  148 ccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttgaa------tatgacttattgagcaaat 241  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||      |||||||||||||||||||    
T  19434044 ccctttgaacatttttcttctcattgatacttatgtttaaagtcatcga---tattattatggtctctatttgaatttatctatgacttattgagcaaat 19434140  T
Q  242 ggtttgaaaataga 255  Q
    | ||||||||||||    
T  19434141 gatttgaaaataga 19434154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 455
Target Start/End: Complemental strand, 5706305 - 5706249
Alignment:
Q  399 gtggatttgatttggatttacttatgactacaagtggtagaatttcaattgagtttt 455  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  5706305 gtggatttgatttggatttacttatgactacaagtggtagattttcaattgaatttt 5706249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 6912480 - 6912410
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| || |||||||||||| |||| || ||||||||||||||||||||||||||    
T  6912480 aaatggggaacacaccctttgaac-tttttcttctcaatgatgctcatgtttaaagtcatcgatattattat 6912410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 249 - 351
Target Start/End: Original strand, 19434291 - 19434392
Alignment:
Q  249 aaatagagatttaattgcatatattttgtacactagttttgatatgttcctaaaaactagttttgcctagttttgatattgtctaaagcatggttttgga 348  Q
    |||| ||||||| |||||||||||||||| || |||||||||||| ||||| | |||||| |||| ||| |||||||||  | |||||||| |||||| |    
T  19434291 aaatggagatttgattgcatatattttgtgcaatagttttgatattttcct-ataactagatttgactatttttgatatgttgtaaagcatagttttgaa 19434389  T
Q  349 att 351  Q
    |||    
T  19434390 att 19434392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 6912101 - 6912028
Alignment:
Q  400 tggatttga-tttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||| ||||||||||||||||| || |||| ||||| ||||||||||||||| ||| ||| ||||||||    
T  6912101 tggatttgaatttggatttacttatgattataagtagtagattttcaattgagttttgatgatacgtattttga 6912028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 5706431 - 5706383
Alignment:
Q  249 aaatagagatttaattgcatatattttgtacactagttttgatatgttc 297  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  5706431 aaatggagatttgattgcatatattttgtgcactagttttgatatgttc 5706383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 351
Target Start/End: Original strand, 11199970 - 11200071
Alignment:
Q  249 aaatagagatttaattgcatatattttgtacactagttttgatatgttcctaaaaactagttttgcctagttttgatattgtctaaagcatggttttgga 348  Q
    |||| ||||||| |||||| |||||  ||  |||||| || |||||||||| ||| ||||||||| |||||||||||||  | ||||||||||||||| |    
T  11199970 aaatggagatttgattgcacatattgagtgtactagtattcatatgttcctcaaa-ctagttttgactagttttgatatattgtaaagcatggttttgaa 11200068  T
Q  349 att 351  Q
    |||    
T  11200069 att 11200071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 472
Target Start/End: Original strand, 11200098 - 11200190
Alignment:
Q  382 atttatatgtactcgtagtggatttgatttggattt--acttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||||||| |   |||||| |||||||||||  |||||||| || |||| ||| | ||||||||||||||| | |||| |||||||||    
T  11200098 atttatatgtacttgatttggattggatttggatttggacttatgattataagtagtaaattttcaattgagttttgacggtaaatattttga 11200190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 351
Target Start/End: Complemental strand, 5706399 - 5706363
Alignment:
Q  315 ctagttttgatattgtctaaagcatggttttggaatt 351  Q
    |||||||||||||  ||||||||||||||||||||||    
T  5706399 ctagttttgatatgttctaaagcatggttttggaatt 5706363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 2e-29; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 39155796 - 39155672
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttgaa------tatga 227  Q
    |||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |      |||||    
T  39155796 aaatggggaacacgccctttgaacatttttcttctcattgatacttatgtttaaagtcatcgatatta---ttatggtctctatttggatttatctatga 39155700  T
Q  228 cttattgagcaaatggtttgaaaataga 255  Q
    ||||||||||||||| ||||||||||||    
T  39155699 cttattgagcaaatgatttgaaaataga 39155672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 809939 - 809897
Alignment:
Q  23 aggaattgagttctttcgtcatatctgtgagttgatgacgatc 65  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  809939 aggaattgagttctttcgtcatatctgtgagttgataacgatc 809897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 809826 - 809756
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| || |||||||| ||| |||| || ||||||||||||||||||||||||||    
T  809826 aaatggggaacacaccctttgaac-tttttcttatcaatgatgctcatgtttaaagtcatcgatattattat 809756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 45331289 - 45331360
Alignment:
Q  400 tggatttga-tttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatatttt 470  Q
    ||||||||| |||||||||| |||||| || || | ||||| ||||||||||||||| ||||| ||||||||    
T  45331289 tggatttgaatttggatttatttatgattataactagtagattttcaattgagttttgatggtgcatatttt 45331360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 15001856 - 15001783
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgttt--aaagtcatcgatattattat 205  Q
    |||||||  ||||||||||||  | |||||||||||| |||| || ||||||  ||||||||||||||||||||    
T  15001856 aaatggggaacacaccctttgagcttttttcttctcaatgatgctcatgtttttaaagtcatcgatattattat 15001783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 2587472 - 2587520
Alignment:
Q  248 aaaatagagatttaattgcatatattttgtacactagttttgatatgtt 296  Q
    ||||| ||||| | |||||||||||||||| || |||||||||||||||    
T  2587472 aaaatggagatatgattgcatatattttgtgcaatagttttgatatgtt 2587520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 9312428 - 9312388
Alignment:
Q  158 atttttcttctcattgatacttatgtttaaagtcatcgata 198  Q
    ||||||||||||||||||| ||||||| |||||||| ||||    
T  9312428 atttttcttctcattgatatttatgttgaaagtcattgata 9312388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 27561100 - 27561136
Alignment:
Q  16 catcacaaggaattgagttctttcgtcatatctgtga 52  Q
    |||||| |||||||||||||||||||||||| |||||    
T  27561100 catcactaggaattgagttctttcgtcatatatgtga 27561136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 37457541 - 37457577
Alignment:
Q  16 catcacaaggaattgagttctttcgtcatatctgtga 52  Q
    |||||| |||||||||||||||||||||||| |||||    
T  37457541 catcactaggaattgagttctttcgtcatatatgtga 37457577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 9e-22; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 5520567 - 5520495
Alignment:
Q  145 acaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttg 220  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  5520567 acaccctttgaacatttttcctctcattgatacttatgtttaaagtcatcgatatta---ttatggtctctatttg 5520495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 377 - 455
Target Start/End: Complemental strand, 5520262 - 5520184
Alignment:
Q  377 ttggcatttatatgtactcgtagtggatttgatttggatttacttatgactacaagtggtagaatttcaattgagtttt 455  Q
    |||| ||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  5520262 ttggtattaatatgtacgcgatgtggatttgatttggatttacttatgactacaagtggtagattttcgattgagtttt 5520184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 42784416 - 42784465
Alignment:
Q  16 catcacaaggaattgagttctttcgtcatatctgtgagttgatgacgatc 65  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42784416 catcactaggaattgagttctttcgtcatatctgtgagttgatgacgatc 42784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 15597676 - 15597747
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| | ||||||| ||||||||||||||||||| | |||||| |||||||||||    
T  15597676 aaatggggaacacaccctttgaagatttttcctctcattgatacttatgttaacagtcattgatattattat 15597747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 4707753 - 4707704
Alignment:
Q  16 catcacaaggaattgagttctttcgtcatatctgtgagttgatgacgatc 65  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  4707753 catcactaggaattgagttctttcgtcatatctgtgagttgataacgatc 4707704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 4707635 - 4707565
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| || |||||||||||| |||| || |||||||||||||||||| |||||||    
T  4707635 aaatggggaacacaccctttgaac-tttttcttctcaatgatgctcatgtttaaagtcatcgatgttattat 4707565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 26341579 - 26341511
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattatta 204  Q
    |||||||| |||||||||||| ||||||| ||| ||||||||| ||||||||||||||||| ||| |||||    
T  26341579 aaatggga-acacaccctttgaacatttt-cttgtcattgatatttatgtttaaagtcatcaatactatta 26341511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 26341246 - 26341173
Alignment:
Q  400 tggatttga-tttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||| ||||||||||||||||| || |||| || || ||||||||||||||| ||| ||| ||||||||    
T  26341246 tggatttgaatttggatttacttatgattataagtagtggattttcaattgagttttgatgatacctattttga 26341173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 26918057 - 26917984
Alignment:
Q  400 tggatttg-atttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    |||||||| |||||||||||||||||  || |||| ||||| |||| |||||||||| ||| ||| ||||||||    
T  26918057 tggatttgcatttggatttacttatgtttataagtagtagattttcgattgagttttgatgatacgtattttga 26917984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 8 - 93
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttgaat 223  Q
    |||||||  |||||||||||| || |||||||||||| |||| || |||||||||||||||||||||   |||||||||||| |||||||    
T  8 aaatggggaacacaccctttgaac-tttttcttctcaatgatgctcatgtttaaagtcatcgatatt---attatggtctctgtttgaat 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 4144 - 4229
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttgaat 223  Q
    |||||||  |||||||||||| || |||||||||||| |||| || |||||||||||||||||||||   |||||||||||| |||||||    
T  4144 aaatggggaacacaccctttgaac-tttttcttctcaatgatgctcatgtttaaagtcatcgatatt---attatggtctctgtttgaat 4229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 472
Target Start/End: Original strand, 221 - 286
Alignment:
Q  407 gatttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||||||||||||| || |||| || || |||| |||||||||| ||| ||| ||||||||    
T  221 gatttggatttacttatgattataagtagtggattttcgattgagttttgatgatacgtattttga 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 472
Target Start/End: Original strand, 4357 - 4422
Alignment:
Q  407 gatttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||||||||||||| || |||| || || |||| |||||||||| ||| ||| ||||||||    
T  4357 gatttggatttacttatgattataagtagtggattttcgattgagttttgatgatacgtattttga 4422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 2694 - 2764
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| || |||||||||||| |||| || ||||||||||||||||||||||||||    
T  2694 aaatggggaacacaccctttgaac-tttttcttctcaatgatgctcatgtttaaagtcatcgatattattat 2764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 223
Target Start/End: Original strand, 33062078 - 33062154
Alignment:
Q  143 acacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattattatggtctctatttgaat 223  Q
    |||||||||||| || |||||||||||| |||| || |||||||||||||||||||||   |||||||||||| |||||||    
T  33062078 acacaccctttgaac-tttttcttctcaatgatgctcatgtttaaagtcatcgatatt---attatggtctctgtttgaat 33062154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 9821699 - 9821769
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||||||| || ||||||| |||| |||| || ||||||||||||||||||||||||||    
T  9821699 aaatggggaacacaccctttgaac-tttttctcctcaatgatgctcatgtttaaagtcatcgatattattat 9821769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 25479411 - 25479341
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||  |||||||| ||| || |||||||||||| || | || ||||||||||||||||||||||||||    
T  25479411 aaatggggaacacacccattgaac-tttttcttctcaatgttgctcatgtttaaagtcatcgatattattat 25479341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 472
Target Start/End: Original strand, 33062447 - 33062520
Alignment:
Q  400 tggatttga-tttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||| ||||||||||||||||| || |||| || || |||| |||||||||| ||| |||||| |||||    
T  33062447 tggatttgaatttggatttacttatgattataagtagtggattttcgattgagttttgatgatacatactttga 33062520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 472
Target Start/End: Original strand, 9814247 - 9814311
Alignment:
Q  408 atttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    |||||||||||||||||| || |||| || || |||| |||||||||| ||| ||| ||||||||    
T  9814247 atttggatttacttatgattataagtagtggattttcgattgagttttgatgatacgtattttga 9814311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 472
Target Start/End: Original strand, 9822087 - 9822151
Alignment:
Q  408 atttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    |||||||||||||||||| || |||| || || |||| |||||||||| ||| ||| ||||||||    
T  9822087 atttggatttacttatgattataagtagtggattttcgattgagttttgatgatacgtattttga 9822151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 410 - 472
Target Start/End: Complemental strand, 413640 - 413580
Alignment:
Q  410 ttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    |||||||||||||||| ||  ||| ||||| ||||||||||||||| ||||||||||||||||    
T  413640 ttggatttacttatgatta--agtagtagattttcaattgagttttgatggtacatattttga 413580  T

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Target: scaffold0438 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 205
Target Start/End: Complemental strand, 8750 - 8689
Alignment:
Q  143 acacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattattat 205  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||||||| ||| ||||||    
T  8750 acacaccctttgaacatttt-cttgtcattgatatttatgtttaaagtcatcaatactattat 8689  T

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Target: scaffold0438; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 11740 - 11672
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattatta 204  Q
    |||||||| |||||||||||| ||||||| ||| ||||||||| ||||||||||||||||| ||| |||||    
T  11740 aaatggga-acacaccctttgaacatttt-cttgtcattgatatttatgtttaaagtcatcaatactatta 11672  T

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Target: scaffold0438; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 8426 - 8353
Alignment:
Q  400 tggatttga-tttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||| ||||||||||||||||| || |||| || || ||||||||||||||| ||| ||| ||||||||    
T  8426 tggatttgaatttggatttacttatgattataagtagtggattttcaattgagttttgatgatacctattttga 8353  T

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Target: scaffold0438; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 400 - 472
Target Start/End: Complemental strand, 11407 - 11334
Alignment:
Q  400 tggatttga-tttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||| ||||||||||||||||| || |||| || || ||||||||||||||| ||| ||| ||||||||    
T  11407 tggatttgaatttggatttacttatgattataagtagtggattttcaattgagttttgatgatacctattttga 11334  T

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Target: scaffold0654 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 472
Target Start/End: Complemental strand, 4448 - 4383
Alignment:
Q  407 gatttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||||||||||||| || |||| ||| | |||||||||| |||| ||| ||||||||||||    
T  4448 gatttggatttacttatgattataagtagtaaattttcaattgacttttgatgatacatattttga 4383  T

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Target: scaffold0654; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 472
Target Start/End: Complemental strand, 5802 - 5737
Alignment:
Q  407 gatttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatattttga 472  Q
    ||||||||||||||||||| || |||| ||| | |||||||||| |||| ||| ||||||||||||    
T  5802 gatttggatttacttatgattataagtagtaaattttcaattgacttttgatgatacatattttga 5737  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 28802619 - 28802687
Alignment:
Q  134 aaatgggacacacaccctttggacatttttcttctcattgatacttatgtttaaagtcatcgatattat 202  Q
    |||||||  |||||| ||||| |||||| || ||||||||||||||||| | |||||||| ||||||||    
T  28802619 aaatggggaacacactctttgaacatttctcctctcattgatacttatggtaaaagtcattgatattat 28802687  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 470
Target Start/End: Complemental strand, 115751 - 115689
Alignment:
Q  408 atttggatttacttatgactacaagtggtagaatttcaattgagtttttatggtacatatttt 470  Q
    |||||||||||||||||| || |||| ||| | ||||||||||||||| ||| ||| ||||||    
T  115751 atttggatttacttatgattataagtagtaaattttcaattgagttttgatgatacctatttt 115689  T

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