View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9026_low_2 (Length: 1091)

Name: NF9026_low_2
Description: NF9026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9026_low_2
NF9026_low_2
[»] chr4 (56 HSPs)
chr4 (13-950)||(49810865-49811796)
chr4 (761-946)||(374949-375135)
chr4 (772-942)||(51470076-51470246)
chr4 (772-946)||(55681968-55682142)
chr4 (772-946)||(7199190-7199364)
chr4 (837-950)||(48236174-48236288)
chr4 (821-946)||(41055478-41055603)
chr4 (541-652)||(38690666-38690778)
chr4 (534-652)||(16556451-16556570)
chr4 (534-652)||(40406936-40407056)
chr4 (534-653)||(13539816-13539934)
chr4 (795-946)||(37517466-37517616)
chr4 (795-946)||(37521682-37521832)
chr4 (534-652)||(37574273-37574391)
chr4 (534-648)||(45847902-45848017)
chr4 (541-602)||(56555599-56555660)
chr4 (549-652)||(43084447-43084551)
chr4 (534-601)||(11491195-11491262)
chr4 (541-654)||(29889761-29889875)
chr4 (535-652)||(37889583-37889701)
chr4 (548-588)||(49607615-49607655)
chr4 (543-602)||(2832056-2832115)
chr4 (550-652)||(14794917-14795020)
chr4 (534-644)||(45355694-45355804)
chr4 (534-644)||(45369435-45369545)
chr4 (534-652)||(46283122-46283241)
chr4 (546-628)||(22525413-22525495)
chr4 (555-638)||(24570224-24570308)
chr4 (549-652)||(29430497-29430601)
chr4 (544-588)||(35733439-35733483)
chr4 (534-602)||(48404113-48404181)
chr4 (544-588)||(49607941-49607985)
chr4 (534-602)||(50815758-50815826)
chr4 (534-589)||(22341838-22341893)
chr4 (534-652)||(26885376-26885495)
chr4 (541-588)||(36993106-36993153)
chr4 (541-588)||(44251310-44251357)
chr4 (534-576)||(2766734-2766776)
chr4 (555-652)||(43362165-43362263)
chr4 (534-579)||(35305056-35305101)
chr4 (555-605)||(41540542-41540594)
chr4 (544-584)||(2931133-2931173)
chr4 (535-603)||(25234835-25234903)
chr4 (534-602)||(42154617-42154685)
chr4 (546-627)||(15334781-15334864)
chr4 (548-587)||(21200596-21200634)
chr4 (569-620)||(42758175-42758226)
chr4 (612-655)||(49607887-49607930)
chr4 (534-652)||(51974747-51974866)
chr4 (658-688)||(5416429-5416459)
chr4 (534-605)||(8716364-8716437)
chr4 (553-638)||(22096386-22096472)
chr4 (612-654)||(49607562-49607604)
chr4 (552-582)||(56360632-56360662)
chr4 (658-691)||(1871358-1871391)
chr4 (558-602)||(36008326-36008371)
[»] chr1 (54 HSPs)
chr1 (772-946)||(42872601-42872775)
chr1 (759-946)||(52539251-52539438)
chr1 (772-946)||(52004838-52005012)
chr1 (772-946)||(20010724-20010898)
chr1 (534-648)||(19424050-19424165)
chr1 (534-655)||(35195587-35195709)
chr1 (534-652)||(24134600-24134719)
chr1 (534-588)||(29332349-29332403)
chr1 (535-652)||(40209892-40210010)
chr1 (549-653)||(22779222-22779327)
chr1 (534-602)||(2350351-2350419)
chr1 (534-602)||(10123029-10123097)
chr1 (534-633)||(42946443-42946543)
chr1 (534-588)||(25031473-25031527)
chr1 (545-653)||(1862827-1862935)
chr1 (534-602)||(3347679-3347747)
chr1 (534-652)||(43109214-43109333)
chr1 (549-597)||(27980124-27980172)
chr1 (534-652)||(40061443-40061562)
chr1 (534-652)||(49619972-49620091)
chr1 (550-652)||(50011507-50011610)
chr1 (577-643)||(34940436-34940502)
chr1 (555-632)||(35111669-35111747)
chr1 (534-587)||(27054762-27054815)
chr1 (554-602)||(8893911-8893959)
chr1 (549-652)||(14262712-14262816)
chr1 (534-633)||(25299878-25299978)
chr1 (534-637)||(31964592-31964696)
chr1 (541-652)||(44583588-44583699)
chr1 (534-652)||(7438621-7438740)
chr1 (534-652)||(12973254-12973373)
chr1 (534-652)||(15417793-15417912)
chr1 (534-652)||(34702289-34702408)
chr1 (534-652)||(47651872-47651990)
chr1 (549-588)||(50065075-50065114)
chr1 (534-588)||(12148549-12148603)
chr1 (534-588)||(46532471-46532525)
chr1 (534-588)||(49239823-49239877)
chr1 (534-603)||(16985911-16985980)
chr1 (552-589)||(20267885-20267922)
chr1 (549-602)||(47428886-47428939)
chr1 (552-589)||(49895799-49895836)
chr1 (545-652)||(22853748-22853856)
chr1 (555-599)||(35309778-35309822)
chr1 (534-602)||(41618736-41618804)
chr1 (541-588)||(10790476-10790523)
chr1 (534-601)||(23368708-23368775)
chr1 (534-652)||(48497189-48497308)
chr1 (558-618)||(1031621-1031683)
chr1 (534-588)||(4126964-4127018)
chr1 (544-602)||(50302837-50302894)
chr1 (535-643)||(7006601-7006710)
chr1 (535-588)||(29936658-29936711)
chr1 (541-620)||(39238748-39238826)
[»] chr7 (53 HSPs)
chr7 (759-950)||(48826723-48826914)
chr7 (787-946)||(33516424-33516583)
chr7 (793-919)||(11591420-11591545)
chr7 (817-942)||(46067201-46067326)
chr7 (534-652)||(26606085-26606204)
chr7 (535-652)||(15025156-15025274)
chr7 (534-652)||(5228071-5228189)
chr7 (544-654)||(46243289-46243400)
chr7 (534-653)||(9668792-9668910)
chr7 (534-643)||(28914853-28914964)
chr7 (851-946)||(43613823-43613918)
chr7 (534-638)||(4956068-4956173)
chr7 (534-654)||(23602272-23602393)
chr7 (534-652)||(48433686-48433805)
chr7 (541-654)||(44662446-44662560)
chr7 (534-651)||(6548688-6548805)
chr7 (549-652)||(40273821-40273925)
chr7 (534-652)||(14707293-14707411)
chr7 (549-602)||(10091448-10091501)
chr7 (541-653)||(29357800-29357912)
chr7 (534-652)||(31793468-31793587)
chr7 (534-588)||(20529961-20530015)
chr7 (543-652)||(23824577-23824686)
chr7 (544-653)||(37665743-37665853)
chr7 (534-588)||(46195983-46196037)
chr7 (546-602)||(10624786-10624841)
chr7 (550-602)||(12166133-12166185)
chr7 (549-652)||(24029985-24030089)
chr7 (534-652)||(27454011-27454131)
chr7 (544-588)||(43440754-43440798)
chr7 (551-603)||(47324476-47324528)
chr7 (541-601)||(48258167-48258227)
chr7 (549-643)||(48525586-48525681)
chr7 (534-576)||(13295351-13295393)
chr7 (553-603)||(25775608-25775658)
chr7 (552-633)||(40011731-40011813)
chr7 (543-584)||(20013650-20013691)
chr7 (545-650)||(32376442-32376547)
chr7 (536-588)||(48619861-48619913)
chr7 (552-652)||(3889794-3889896)
chr7 (545-588)||(24575215-24575258)
chr7 (553-643)||(25770037-25770128)
chr7 (551-589)||(35307926-35307965)
chr7 (545-588)||(36977228-36977271)
chr7 (551-602)||(42841774-42841825)
chr7 (658-688)||(16366600-16366630)
chr7 (555-652)||(33248799-33248897)
chr7 (534-588)||(38378284-38378338)
chr7 (658-688)||(44648046-44648076)
chr7 (659-688)||(4888550-4888579)
chr7 (535-588)||(26455982-26456035)
chr7 (534-579)||(33342795-33342840)
chr7 (558-602)||(46716384-46716429)
[»] scaffold0368 (1 HSPs)
scaffold0368 (772-946)||(7814-7988)
[»] scaffold0101 (1 HSPs)
scaffold0101 (772-946)||(18675-18849)
[»] chr8 (36 HSPs)
chr8 (772-946)||(38566559-38566733)
chr8 (541-654)||(19957304-19957418)
chr8 (534-652)||(11052560-11052679)
chr8 (534-652)||(1032570-1032689)
chr8 (534-650)||(38289211-38289328)
chr8 (534-602)||(43413862-43413930)
chr8 (534-652)||(4259859-4259978)
chr8 (534-588)||(8145838-8145892)
chr8 (535-638)||(10201276-10201380)
chr8 (549-652)||(41454818-41454922)
chr8 (534-650)||(19733045-19733162)
chr8 (558-628)||(34073238-34073311)
chr8 (534-602)||(17855700-17855768)
chr8 (534-652)||(39172189-39172307)
chr8 (534-643)||(43508426-43508534)
chr8 (535-652)||(10621352-10621470)
chr8 (535-652)||(32822116-32822233)
chr8 (534-602)||(36587626-36587694)
chr8 (552-588)||(38064042-38064078)
chr8 (549-652)||(41845420-41845524)
chr8 (544-643)||(279983-280082)
chr8 (544-643)||(635770-635869)
chr8 (544-643)||(821573-821672)
chr8 (534-652)||(1360111-1360229)
chr8 (544-579)||(3956731-3956766)
chr8 (541-588)||(11690937-11690984)
chr8 (606-653)||(18080938-18080985)
chr8 (534-652)||(22652683-22652802)
chr8 (553-651)||(43456648-43456746)
chr8 (554-588)||(3728224-3728258)
chr8 (563-652)||(36103927-36104017)
chr8 (534-584)||(39104675-39104725)
chr8 (558-602)||(5184886-5184931)
chr8 (534-650)||(8349459-8349576)
chr8 (558-602)||(10199741-10199786)
chr8 (612-653)||(40444704-40444745)
[»] chr2 (38 HSPs)
chr2 (772-945)||(33458361-33458534)
chr2 (772-942)||(34478944-34479114)
chr2 (534-653)||(24202149-24202269)
chr2 (534-643)||(42541165-42541274)
chr2 (552-638)||(37886219-37886305)
chr2 (554-652)||(43684279-43684377)
chr2 (534-648)||(1962830-1962944)
chr2 (534-652)||(34107495-34107613)
chr2 (549-653)||(25783205-25783309)
chr2 (534-652)||(33065233-33065352)
chr2 (534-601)||(37592198-37592265)
chr2 (534-588)||(41541516-41541570)
chr2 (534-603)||(43027205-43027274)
chr2 (534-601)||(29090467-29090534)
chr2 (534-584)||(41750015-41750065)
chr2 (534-584)||(42998704-42998754)
chr2 (541-602)||(19843346-19843407)
chr2 (550-634)||(33613597-33613682)
chr2 (534-653)||(20435780-20435899)
chr2 (534-653)||(5206998-5207117)
chr2 (541-653)||(9564537-9564651)
chr2 (541-584)||(18424135-18424178)
chr2 (534-588)||(5207157-5207211)
chr2 (534-652)||(31149078-31149196)
chr2 (552-601)||(3330195-3330244)
chr2 (535-588)||(5901808-5901861)
chr2 (552-601)||(42678318-42678367)
chr2 (549-652)||(17269912-17270016)
chr2 (534-602)||(18949661-18949728)
chr2 (572-643)||(31594380-31594452)
chr2 (535-652)||(32084845-32084956)
chr2 (552-600)||(35710165-35710213)
chr2 (534-653)||(36755621-36755741)
chr2 (541-580)||(10745487-10745526)
chr2 (534-588)||(17543066-17543120)
chr2 (576-638)||(24374216-24374277)
chr2 (658-688)||(32009938-32009968)
chr2 (658-691)||(30857639-30857672)
[»] chr5 (28 HSPs)
chr5 (759-942)||(41992255-41992438)
chr5 (772-946)||(37369639-37369813)
chr5 (534-654)||(15680877-15680998)
chr5 (546-654)||(34729468-34729578)
chr5 (534-652)||(31250147-31250266)
chr5 (534-654)||(20191440-20191560)
chr5 (534-652)||(43227866-43227986)
chr5 (549-652)||(38503248-38503352)
chr5 (536-579)||(12256474-12256517)
chr5 (534-652)||(42208917-42209035)
chr5 (549-601)||(4395842-4395894)
chr5 (534-652)||(17077361-17077480)
chr5 (534-588)||(5039745-5039799)
chr5 (534-580)||(33545363-33545409)
chr5 (534-650)||(5263171-5263288)
chr5 (558-603)||(35168632-35168677)
chr5 (549-652)||(15470612-15470716)
chr5 (535-602)||(1572161-1572228)
chr5 (543-652)||(1984174-1984284)
chr5 (534-584)||(5048701-5048751)
chr5 (558-610)||(5156940-5156993)
chr5 (557-620)||(10508612-10508677)
chr5 (557-620)||(15978675-15978740)
chr5 (558-602)||(18478054-18478099)
chr5 (558-602)||(19059003-19059048)
chr5 (558-602)||(20762332-20762377)
chr5 (558-602)||(32158413-32158458)
chr5 (555-588)||(38435984-38436017)
[»] chr3 (50 HSPs)
chr3 (772-946)||(39759338-39759512)
chr3 (772-942)||(43823478-43823648)
chr3 (534-654)||(38414882-38415002)
chr3 (541-652)||(45431627-45431739)
chr3 (837-950)||(53286405-53286516)
chr3 (534-653)||(27394507-27394626)
chr3 (534-653)||(166787-166907)
chr3 (534-648)||(1102672-1102787)
chr3 (534-652)||(50676843-50676962)
chr3 (545-652)||(49429461-49429568)
chr3 (534-652)||(50381714-50381833)
chr3 (541-653)||(37756396-37756511)
chr3 (534-652)||(33528181-33528300)
chr3 (534-640)||(43897614-43897721)
chr3 (534-652)||(54457153-54457272)
chr3 (534-588)||(8930953-8931007)
chr3 (534-643)||(22602179-22602289)
chr3 (534-650)||(47864638-47864755)
chr3 (550-652)||(11483613-11483716)
chr3 (534-652)||(50271730-50271848)
chr3 (534-602)||(29645803-29645871)
chr3 (534-652)||(46798582-46798701)
chr3 (545-643)||(48717422-48717521)
chr3 (534-588)||(38668193-38668247)
chr3 (534-602)||(27471555-27471623)
chr3 (549-652)||(32421348-32421452)
chr3 (534-602)||(39739325-39739393)
chr3 (534-652)||(27817044-27817162)
chr3 (541-643)||(28054713-28054815)
chr3 (541-643)||(28065138-28065240)
chr3 (555-653)||(31419582-31419681)
chr3 (552-602)||(29226377-29226427)
chr3 (534-584)||(31435477-31435527)
chr3 (545-579)||(41768447-41768481)
chr3 (534-588)||(44062018-44062072)
chr3 (535-581)||(50332935-50332981)
chr3 (534-588)||(54964517-54964571)
chr3 (534-652)||(25165440-25165563)
chr3 (544-588)||(985905-985949)
chr3 (534-602)||(9320935-9321003)
chr3 (544-588)||(9738421-9738465)
chr3 (546-582)||(24651195-24651231)
chr3 (558-620)||(49639060-49639124)
chr3 (554-652)||(34225195-34225296)
chr3 (549-653)||(7239805-7239906)
chr3 (658-688)||(24647920-24647950)
chr3 (534-588)||(40415538-40415592)
chr3 (534-652)||(55426114-55426229)
chr3 (569-602)||(21249001-21249034)
chr3 (558-602)||(32508793-32508838)
[»] chr6 (30 HSPs)
chr6 (795-946)||(3288486-3288637)
chr6 (837-950)||(11843247-11843358)
chr6 (535-648)||(7164699-7164812)
chr6 (534-649)||(5641666-5641781)
chr6 (534-652)||(6228236-6228355)
chr6 (534-652)||(17216958-17217077)
chr6 (534-652)||(20415538-20415657)
chr6 (534-638)||(35065466-35065570)
chr6 (547-652)||(8330480-8330586)
chr6 (534-602)||(5757847-5757915)
chr6 (534-602)||(18903343-18903411)
chr6 (534-603)||(31703704-31703773)
chr6 (547-638)||(9455854-9455945)
chr6 (541-655)||(3338290-3338404)
chr6 (541-638)||(7954905-7955003)
chr6 (551-638)||(32470698-32470787)
chr6 (549-585)||(1183943-1183979)
chr6 (550-602)||(11611420-11611472)
chr6 (534-626)||(9763461-9763553)
chr6 (534-638)||(29321952-29322057)
chr6 (534-602)||(4854282-4854350)
chr6 (534-589)||(6371582-6371637)
chr6 (550-588)||(1194696-1194733)
chr6 (555-653)||(20568252-20568352)
chr6 (534-588)||(34884133-34884187)
chr6 (534-579)||(3200059-3200104)
chr6 (552-585)||(3974509-3974542)
chr6 (558-602)||(6270608-6270653)
chr6 (534-587)||(11552937-11552990)
chr6 (544-652)||(24794881-24794990)
[»] scaffold0699 (1 HSPs)
scaffold0699 (795-946)||(23-174)
[»] scaffold0001 (1 HSPs)
scaffold0001 (534-652)||(419712-419831)
[»] scaffold0054 (1 HSPs)
scaffold0054 (544-649)||(22462-22568)
[»] scaffold0005 (1 HSPs)
scaffold0005 (550-652)||(44711-44814)
[»] scaffold0126 (1 HSPs)
scaffold0126 (569-620)||(22861-22912)
[»] scaffold0087 (1 HSPs)
scaffold0087 (534-601)||(44331-44398)


Alignment Details
Target: chr4 (Bit Score: 780; Significance: 0; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 780; E-Value: 0
Query Start/End: Original strand, 13 - 950
Target Start/End: Original strand, 49810865 - 49811796
Alignment:
Q  13 agcagagagaaaataaatgttaattgctagtagtattttgaatgagagtggatttaaggactcgtgcagagaataatgataaacagcatcagattccaaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49810865 agcagagagaaaataaatgttaattgctagtagtattttgaatgagagtggatttaaggactcgtgcagagaataatgataaacagcatcagattccaaa 49810964  T
Q  113 atgcttaattagattcatctctggttggttctc----tttctgtggttcgcagaatcccagcttcaaatttcaagaactgaattggcacgcacaaaagta 208  Q
    ||||||||||||||| |||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49810965 atgcttaattagatttatctctggttggttctctctctttctgtggttcgcagaatcccagcttcaaatttcaagaactgaattggcacgcacaaaagta 49811064  T
Q  209 ttattctaagtttcataatttaattggcacatatgaaagtattattccaaggtttttattcctggttattttaaaaatgaagaatgaattttgaaactga 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49811065 ttattctaagtttcataatttaattggcacatatgaaagtattattccaaggtttttattcctggttattttaaaaatgaagaatgaattttgaaactga 49811164  T
Q  309 atatttgtgtgtgaatattatggtacattgaattcacagttactataatatacatttacatacaaggtaaaaatggataacgaaactctcccaattccaa 408  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49811165 atatttgtgtgtgaattttatggtacattgaattcacagttactataatatacatttacatacaaggtaaaaatggataacgaaactctcccaattccaa 49811264  T
Q  409 ttaaacggctttcttagaacactcatgctacttcaaagttatatcataccttttcgatgccatgagcaactccctggtggtcctcaaaaatgtttctcac 508  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| ||||||    
T  49811265 ttaaacggctttcttagaacactcatgctacttcaaagttatatcataccttttcgataccatgagcaactccttggtggtcctaaaaaatgtctctcac 49811364  T
Q  509 atacactctannnnnnnnnnnnnnngtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgccc 608  Q
    ||||||| |                |||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||||    
T  49811365 atacactat------ttttttttttgtcaagtagcctagcggctagagaaattcatcttaaaggtgaataagtggggtattatgggttcgaaccctgccc 49811458  T
Q  609 ctacatataatatgcattattccttaccaagtgagataagctcacatacactccatttattttgtcaaatggagaggatcctatcccccatataaatata 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49811459 ctacatataatatgcattattccttaccaagtgagataagctcacatacactccatttattttgtcaaatggagaggatcctatcccccatataaatata 49811558  T
Q  709 tatgatgctgnnnnnnnaactcccatgattcttaaaaattactcatgattgagaaagtggctgaagcgggcgcgatgtgggttaaagcggacgcttttta 808  Q
    ||||||||||       |||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49811559 tatgatgctg-ttttttaactc---tgattcttaaaaattactcatgattgagaaagtggctgaagcgggcgcgatgtgggttaaagcggacgcttttta 49811654  T
Q  809 ctcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaactatactcttctccatcagaa 908  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49811655 ctcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgttaactatactcttctccatcagaa 49811754  T
Q  909 ccaaatacacaactgcaaaaacaacttcttcatcgtacaaac 950  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  49811755 ccaaatacacaactgcaaaaacaacttcttcatcgtacaaac 49811796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 761 - 946
Target Start/End: Complemental strand, 375135 - 374949
Alignment:
Q  761 gaaagtggctgaagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaaga-ttgcccttcacttaaaaccgttttaaggg 859  Q
    ||||| ||||||||||||||| |||||||| ||||||||||||||||||  ||||||||||||||||||| || || |||||||||||||||||||||||    
T  375135 gaaagcggctgaagcgggcgcaatgtgggtcaaagcggacgctttttacaaccctgtgtaaaatacaagattttcctttcacttaaaaccgttttaaggg 375036  T
Q  860 tcattttttgtaattttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    |||  ||||||||||||||||||  |||||| |||||||||| |||| ||||||||||||| |  |||| ||||||||||||||||||    
T  375035 tca-attttgtaattttcaaaaccataactattactcttctctatcataaccaaatacacagcctcaaacacaacttcttcatcgtac 374949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 772 - 942
Target Start/End: Complemental strand, 51470246 - 51470076
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    ||||||||||||||||||| ||||||| ||||||| ||  ||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||    
T  51470246 aagcgggcgcgatgtgggtcaaagcgggcgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtcat-ttttgta 51470148  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatc 942  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||    
T  51470147 attttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatc 51470076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 772 - 946
Target Start/End: Original strand, 55681968 - 55682142
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    ||||||||||||||  ||| ||||||| ||||||| ||  ||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  55681968 aagcgggcgcgatgcaggtcaaagcgggcgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtca-tttttgta 55682066  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  55682067 attttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 55682142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 772 - 946
Target Start/End: Original strand, 7199190 - 7199364
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||||||||| |||| |||||||  |||||| ||  ||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  7199190 aagcgggcgcgatgcgggtcaaagcgggtgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtca-tttttgta 7199288  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| |||||||||||  |||||||||||||||| |  ||||  |||||||||||||||||    
T  7199289 attttcaaaaccctaactattactcttctcctccagaaccaaatacacagccacaaactcaacttcttcatcgtac 7199364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 837 - 950
Target Start/End: Original strand, 48236174 - 48236288
Alignment:
Q  837 ttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaactt 935  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||| |||||||    
T  48236174 ttcacttaaacccgttttaagggtcattttttgtaattttcaaaaccctaactattactcttctccatcagaaccaaatacacagccgcaaacacaactt 48236273  T
Q  936 cttcatcgtacaaac 950  Q
    ||||||| |||||||    
T  48236274 cttcatcatacaaac 48236288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 821 - 946
Target Start/End: Complemental strand, 41055603 - 41055478
Alignment:
Q  821 aaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaacta-tactcttctccatcagaaccaaatacaca 919  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  41055603 aaatactagatttcccttcatttaaaaccgttttaagggtcat-ttttgtaattttcaaaaccctaactattactcttctccaccagaaccaaatacaca 41055505  T
Q  920 actgcaaaaacaacttcttcatcgtac 946  Q
     |  ||||  |||||||||||||||||    
T  41055504 gccacaaactcaacttcttcatcgtac 41055478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 541 - 652
Target Start/End: Complemental strand, 38690778 - 38690666
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaag 639  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||   |||||||||||  | ||||| ||||||||||||||||| ||||||||||    
T  38690778 agcctagcggctagagaaattcaccttaaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttaccaag 38690679  T
Q  640 tgagataagctca 652  Q
    |||| ||||||||    
T  38690678 tgagctaagctca 38690666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 16556570 - 16556451
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||  |||||||||||  | ||||| || ||| | |||||||| |||    
T  16556570 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgttcggggttcgaaccccgacccctgcacatattgtgcattatccct 16556471  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  16556470 taccaaatgagctaagctca 16556451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 40406936 - 40407056
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa--ccttgcccctacatataatatgcattattcc 631  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||   |||||||||  ||  |||||| || ||| | |||||||| ||    
T  40406936 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacccccggcccctgcacatattgtgcattatccc 40407035  T
Q  632 ttaccaagtgagataagctca 652  Q
    ||||||| |||| ||||||||    
T  40407036 ttaccaaatgagctaagctca 40407056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 534 - 653
Target Start/End: Original strand, 13539816 - 13539934
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||||  ||||||||||| | | |||| |||| |||||||||||| |||    
T  13539816 gtcaagtagcctagcggccagagaaattcaccttaa-ggtgaataaatgaggtgtttggggttcgaaccctagtccctgcata-aatatgcattatccct 13539913  T
Q  633 taccaagtgagataagctcac 653  Q
    ||||||||||| |||||||||    
T  13539914 taccaagtgagctaagctcac 13539934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 795 - 946
Target Start/End: Complemental strand, 37517616 - 37517466
Alignment:
Q  795 gcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaacta-tac 893  Q
    |||| ||||||| ||  ||||||||||||||| | ||| ||||| | ||||||| |||||||||||||| |||||||||||| ||||| ||||||| |||    
T  37517616 gcgggcgcttttgacaaccctgtgtaaaatactaaatttcccttaatttaaaactgttttaagggtcat-ttttgtaatttt-aaaaccctaactattac 37517519  T
Q  894 tcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||| || | ||||||||||| |  ||||  |||||||||||||||||    
T  37517518 tcttctccaccatagccaaatacacagccacaaactcaacttcttcatcgtac 37517466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 795 - 946
Target Start/End: Complemental strand, 37521832 - 37521682
Alignment:
Q  795 gcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaacta-tac 893  Q
    |||| ||||||| ||  ||||||||||||||| | ||| ||||| | ||||||| |||||||||||||| |||||||||||| ||||| ||||||| |||    
T  37521832 gcgggcgcttttgacaaccctgtgtaaaatactaaatttcccttaatttaaaactgttttaagggtcat-ttttgtaatttt-aaaaccctaactattac 37521735  T
Q  894 tcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||| || | ||||||||||| |  ||||  |||||||||||||||||    
T  37521734 tcttctccaccatagccaaatacacagccacaaactcaacttcttcatcgtac 37521682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 37574391 - 37574273
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    ||||| ||| ||  |||||| |||| || ||||||||| |||    
T  37574391 gtcaagtagcctagtggctagagaaattcaccttaaaggtgaataagtggggtgcccggggtttgaaccccggcccctgcatacaa-atgcattatccct 37574293  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  37574292 taccaaatgagctaagctca 37574273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 648
Target Start/End: Original strand, 45847902 - 45848017
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||   |||||||||||  |  |||| || ||| |||||||||| |||    
T  45847902 gtcaagcagcctaggggctaaagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgatccctgcacatattatgcattatccct 45848001  T
Q  633 taccaagtgagataag 648  Q
    || ||| |||||||||    
T  45848002 tatcaaatgagataag 45848017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 541 - 602
Target Start/End: Complemental strand, 56555660 - 56555599
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  56555660 agcctaacggctagagaaattcaccttaaaggtgaataagtggggtgttcgaggttcgaacc 56555599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 652
Target Start/End: Complemental strand, 43084551 - 43084447
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||||||||||||||||||| ||||||||||||||    ||| ||||||||  | |||||| ||||| | |||||||||||||||||| |||| |||    
T  43084551 ggctagagaaattcaccttaaagatgaataagtggggtaaccaggattcgaaccccgacccctatatatattgtgcattattccttaccaaatgagttaa 43084452  T
Q  648 gctca 652  Q
    |||||    
T  43084451 gctca 43084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 11491195 - 11491262
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  11491195 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaac 11491262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 541 - 654
Target Start/End: Original strand, 29889761 - 29889875
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaag 639  Q
    |||||||||||||||||||||||||||||| |||||||| |||||  |     ||||||| ||  |||||| ||||||||||||||||| ||||||  ||    
T  29889761 agcctagcggctagagaaattcaccttaaatgtgaataaatggggcatccgaagttcgaaccccggcccctgcatataatatgcattatcccttacatag 29889860  T
Q  640 tgagataagctcaca 654  Q
    |||| ||||||||||    
T  29889861 tgagctaagctcaca 29889875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 535 - 652
Target Start/End: Original strand, 37889583 - 37889701
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 633  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||   |||||||||||  | ||||| |||||||||| |||| | | |     
T  37889583 tcaagtagcctagtggctagagaaattcaccttaaaagtgaataagtgaggtgtccggggttcgaaccccgacccctgcatataatatacattgtcctta 37889682  T
Q  634 accaagtgagataagctca 652  Q
    || ||||||| ||||||||    
T  37889683 acgaagtgagctaagctca 37889701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 548 - 588
Target Start/End: Complemental strand, 49607655 - 49607615
Alignment:
Q  548 cggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49607655 cggctagagaaattcaccttaaaggtgaataagtggggtgt 49607615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 543 - 602
Target Start/End: Original strand, 2832056 - 2832115
Alignment:
Q  543 cctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||  |||||||||||    
T  2832056 cctagtggctagaggaattcaccttaaagatgaataagtggggtgtttggggttcgaacc 2832115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 550 - 652
Target Start/End: Complemental strand, 14795020 - 14794917
Alignment:
Q  550 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaagtgagataag 648  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||||||||||| |   |||| || || | |||||||||||||||||||| |||  ||||    
T  14795020 gctagagatattcaccttaaaggtaaataagtagggtgttcagggttcgaactccaacccccacttaaattatgcattattccttaccaaatgaactaag 14794921  T
Q  649 ctca 652  Q
    ||||    
T  14794920 ctca 14794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 644
Target Start/End: Original strand, 45355694 - 45355804
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||   |||||||||||  | |||||||| ||| | |||||||| |||    
T  45355694 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcgaaccccgacccctacacatattgtgcattatccct 45355792  T
Q  633 taccaagtgaga 644  Q
    ||| || |||||    
T  45355793 tactaaatgaga 45355804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 644
Target Start/End: Original strand, 45369435 - 45369545
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||   |||||||||||  | |||||||| ||| | |||||||| |||    
T  45369435 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcgaaccccgacccctacacatattgtgcattatccct 45369533  T
Q  633 taccaagtgaga 644  Q
    ||| || |||||    
T  45369534 tactaaatgaga 45369545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 46283241 - 46283122
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| || |||| | ||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  ||| || || ||| | |||||||| |||    
T  46283241 gtcaagtagtctagtgactagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccgctgcacatattgtgcattatccct 46283142  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  46283141 taccaaatgaggtaagctca 46283122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 546 - 628
Target Start/End: Complemental strand, 22525495 - 22525413
Alignment:
Q  546 agcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattat 628  Q
    ||||| |||||||||||| ||||||||||||||||||||||||   || ||||||||  ||  || |||||||||||||||||    
T  22525495 agcggttagagaaattcatcttaaaggtgaataagtggggtgtccgggattcgaacccggcttctgcatataatatgcattat 22525413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 555 - 638
Target Start/End: Complemental strand, 24570308 - 24570224
Alignment:
Q  555 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaa 638  Q
    ||||||||||||||||| ||||||||| |||||||  |||||||||||    |||||||||||| | |||||||| |||||||||    
T  24570308 agaaattcaccttaaagttgaataagtagggtgttcggggttcgaaccccaacccctacatatattgtgcattatcccttaccaa 24570224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 549 - 652
Target Start/End: Complemental strand, 29430601 - 29430497
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||| ||||||||||||||| ||||||||| ||||||   |||||||||||  |  | || ||||||||||||||| | ||||||||||| || |||    
T  29430601 ggctagataaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgatcactgcatataatatgcattgtcccttaccaagtaagctaa 29430502  T
Q  648 gctca 652  Q
    |||||    
T  29430501 gctca 29430497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 544 - 588
Target Start/End: Complemental strand, 35733483 - 35733439
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  35733483 ctagcggctaaagaaactcaccttaaaggtgaataagtggggtgt 35733439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 48404113 - 48404181
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||| ||||| ||||||||||||||||| |||||||||| |||||   |||||||||||    
T  48404113 gtcaagtagcctagtggctaaagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaacc 48404181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 544 - 588
Target Start/End: Complemental strand, 49607985 - 49607941
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  49607985 ctagtggctagagaaattcaccttaaaggtaaataagtggggtgt 49607941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 50815826 - 50815758
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||| ||||||||||||||||||| ||| |||||| |||||||||   |||||||||||    
T  50815826 gtcaagtagcctagtggctagagaaattcacctttaagatgaatatgtggggtgtccggggttcgaacc 50815758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 589
Target Start/End: Original strand, 22341838 - 22341893
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtt 589  Q
    |||||| |||||||||| |||||||||||||||| ||| |||| ||||||||||||    
T  22341838 gtcaagtagcctagcggttagagaaattcacctttaagatgaacaagtggggtgtt 22341893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 26885376 - 26885495
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| |||||||||||| |||||||||| | ||||||||| ||||   ||||||||| ||  |||||  |||||||| |||||||| ||     
T  26885376 gtcaagtagcctagtggctagagaaatccaccttaaagataaataagtggagtgtccggggttcgaaccccggccccagcatataatgtgcattatcccc 26885475  T
Q  633 taccaagtgagataagctca 652  Q
    | |||| |||| ||||||||    
T  26885476 tgccaaatgagctaagctca 26885495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 588
Target Start/End: Complemental strand, 36993153 - 36993106
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  36993153 agcctagtggctagagaaattcaccttaaagatgaataattggggtgt 36993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 588
Target Start/End: Original strand, 44251310 - 44251357
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  44251310 agcctagcggctagaaaaattcaccttaaagatgaataaatggggtgt 44251357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 576
Target Start/End: Original strand, 2766734 - 2766776
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaa 576  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  2766734 gtcaagtagcctagcggctggagaaattcaccttaaaggtgaa 2766776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 555 - 652
Target Start/End: Original strand, 43362165 - 43362263
Alignment:
Q  555 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctca 652  Q
    ||||||||||||||||| ||||||||||||||||   |||||||||||  | |||||  ||||| | |||||||| ||||| ||| |||| ||||||||    
T  43362165 agaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgaatatattgtgcattatcccttagcaaatgagctaagctca 43362263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 534 - 579
Target Start/End: Complemental strand, 35305101 - 35305056
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataa 579  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  35305101 gtcaagtagcctagcggctagagaaaatcaccttaaaagtgaataa 35305056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 555 - 605
Target Start/End: Original strand, 41540542 - 41540594
Alignment:
Q  555 agaaattcacct--taaaggtgaataagtggggtgttaagggttcgaaccttg 605  Q
    ||||||||||||  |||| |||||||||||||||||| |||||||||||||||    
T  41540542 agaaattcacctcttaaacgtgaataagtggggtgttcagggttcgaaccttg 41540594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 544 - 584
Target Start/End: Complemental strand, 2931173 - 2931133
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggg 584  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  2931173 ctagtggctagagaaattcaccttaaagatgaataagtggg 2931133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 535 - 603
Target Start/End: Original strand, 25234835 - 25234903
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 603  Q
    ||||| || |||| || |||||||||||||||||||| ||||||| ||||||||   ||||||||||||    
T  25234835 tcaagtagtctagtggttagagaaattcaccttaaagatgaataactggggtgtctggggttcgaacct 25234903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 42154685 - 42154617
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| |||| |||||||||||||||||||||||||| ||| ||||||  ||||   |||||||||||    
T  42154685 gtcaagtagcccagcggctagagaaattcaccttaaagatgattaagtgaagtgtccggggttcgaacc 42154617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 546 - 627
Target Start/End: Original strand, 15334781 - 15334864
Alignment:
Q  546 agcggctagagaaattcaccttaaaggtgaat-aagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcatta 627  Q
    |||||||||||||||||||| ||||||||||| || ||||||||   |||||| || ||| |||||| |||||| |||||||||    
T  15334781 agcggctagagaaattcaccataaaggtgaataaaatggggtgtccggggttcaaaccctggcccctgcatatattatgcatta 15334864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 548 - 587
Target Start/End: Complemental strand, 21200634 - 21200596
Alignment:
Q  548 cggctagagaaattcaccttaaaggtgaataagtggggtg 587  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  21200634 cggctagagaaattcaccttaaa-gtgaataagtggggtg 21200596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 569 - 620
Target Start/End: Original strand, 42758175 - 42758226
Alignment:
Q  569 aaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataata 620  Q
    ||||||||||||||||||||  ||||||||||||  |||||| |||||||||    
T  42758175 aaggtgaataagtggggtgtccagggttcgaacccggcccctgcatataata 42758226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 612 - 655
Target Start/End: Complemental strand, 49607930 - 49607887
Alignment:
Q  612 catataatatgcattattccttaccaagtgagataagctcacat 655  Q
    ||||||||||||||||| ||||||||||| || |||||||||||    
T  49607930 catataatatgcattatcccttaccaagtaagctaagctcacat 49607887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 51974866 - 51974747
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||| ||||||||||||||| | |||||||||| |||    |||||||| ||   ||||| || ||| | |||||||| |||    
T  51974866 gtcaagtagcctagtggctagataaattcaccttaaagataaataagtgggatgtccgaggttcgaatcccgacccctgcacatattgtgcattatccct 51974767  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  51974766 taccaaatgagctaagctca 51974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 658 - 688
Target Start/End: Complemental strand, 5416459 - 5416429
Alignment:
Q  658 actccatttattttgtcaaatggagaggatc 688  Q
    |||||||||||||||||||||||||||||||    
T  5416459 actccatttattttgtcaaatggagaggatc 5416429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 605
Target Start/End: Original strand, 8716364 - 8716437
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcacctt--aaaggtgaataagtggggtgttaagggttcgaaccttg 605  Q
    |||| |||||||||  |||||||||||||| |||  |||| | ||||||||||||||  |||||||||||||||    
T  8716364 gtcaggcagcctagtagctagagaaattcatcttttaaagataaataagtggggtgtcgagggttcgaaccttg 8716437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 553 - 638
Target Start/End: Original strand, 22096386 - 22096472
Alignment:
Q  553 agagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaa 638  Q
    ||||||||||||||||||  ||||||||||||||||   | ||||||||||  |||||| || ||| | |||||||| |||||||||    
T  22096386 agagaaattcaccttaaaaatgaataagtggggtgtccggagttcgaacctcggcccctgcacatattgtgcattatcccttaccaa 22096472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 612 - 654
Target Start/End: Complemental strand, 49607604 - 49607562
Alignment:
Q  612 catataatatgcattattccttaccaagtgagataagctcaca 654  Q
    ||||||||||||||||| ||||||||||| || ||||||||||    
T  49607604 catataatatgcattatcccttaccaagtaagctaagctcaca 49607562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 552 - 582
Target Start/End: Complemental strand, 56360662 - 56360632
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtg 582  Q
    |||||||||||||||||||||||||||||||    
T  56360662 tagagaaattcaccttaaaggtgaataagtg 56360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 658 - 691
Target Start/End: Original strand, 1871358 - 1871391
Alignment:
Q  658 actccatttattttgtcaaatggagaggatccta 691  Q
    ||||||||||||||||||||| ||||||||||||    
T  1871358 actccatttattttgtcaaattgagaggatccta 1871391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Complemental strand, 36008371 - 36008326
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||    
T  36008371 aattcaccttataaggtgaataagtggggtgttcggggttcgaacc 36008326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 1e-53; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 772 - 946
Target Start/End: Complemental strand, 42872775 - 42872601
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||| |||||||||| ||||||| | ||||||||  |||||||||||||||| |||| |||||||||||||||| ||||||||||| |||||||||    
T  42872775 aagcgggcacgatgtgggtcaaagcgggcactttttacaaccctgtgtaaaatacaggatttcccttcacttaaaaccattttaagggtc-ttttttgta 42872677  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  42872676 attttcaaaaccctaactattactcttctccatcagaaccaaatacacagccgcaaacacaacttcttcatcgtac 42872601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 759 - 946
Target Start/End: Original strand, 52539251 - 52539438
Alignment:
Q  759 gagaaagtggctgaagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagg 858  Q
    ||||||| || |||| ||||||| ||| |||| ||||||| ||||||| ||  ||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  52539251 gagaaagcggatgaaacgggcgcaatgcgggtcaaagcgggcgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagg 52539350  T
Q  859 gtcattttttgtaattttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  52539351 gtca-tttttgtaattttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 52539438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 772 - 946
Target Start/End: Complemental strand, 52005012 - 52004838
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||||||||| |||| ||||||| ||||||| ||  ||||||||||||||| |||||  |||||| |||||||||||||||||||||| |||||||    
T  52005012 aagcgggcgcgatgcgggtcaaagcgggcgcttttgacaaccctgtgtaaaatactagattttccttcatttaaaaccgttttaagggtcat-ttttgta 52004914  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  52004913 attttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 52004838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 772 - 946
Target Start/End: Complemental strand, 20010898 - 20010724
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    ||||||||| |||| |||| ||||||| ||||||| ||  ||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||    
T  20010898 aagcgggcgtgatgcgggtcaaagcgggcgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtcat-ttttgta 20010800  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| |||||||||||| |||| ||||||||||| |  ||||  |||||||||||||||||    
T  20010799 attttcaaaaccctaactattactcttctccaccagagccaaatacacagccacaaactcaacttcttcatcgtac 20010724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 534 - 648
Target Start/End: Complemental strand, 19424165 - 19424050
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||  | ||||| ||||||||||||||||| |||    
T  19424165 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatccct 19424066  T
Q  633 taccaagtgagataag 648  Q
    || ||| |||| ||||    
T  19424065 tatcaaatgagctaag 19424050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 534 - 655
Target Start/End: Original strand, 35195587 - 35195709
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||   ||||||||| ||| | |||| ||||||||||||||||| |||    
T  35195587 gtcaagtagcctagcggctagagaaatttaccttaaaggtgaataagtggagtgtacggggttcgaaccctggtccctgcatataatatgcattatccct 35195686  T
Q  633 taccaagtgagataagctcacat 655  Q
    ||  ||||||| |||||||||||    
T  35195687 tattaagtgagctaagctcacat 35195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 24134600 - 24134719
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  24134600 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 24134699  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  24134700 taccaaatgagctaagctca 24134719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 29332403 - 29332349
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29332403 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 29332349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 535 - 652
Target Start/End: Original strand, 40209892 - 40210010
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 633  Q
    ||||| || |||| ||| |||||||||||||||||||||||| || || ||||||  |||||||||| | | ||||||||||||||||||||| | ||||    
T  40209892 tcaagtagtctagtggccagagaaattcaccttaaaggtgaaaaaatgaggtgtttggggttcgaacttcgacccctacatataatatgcattgtccctt 40209991  T
Q  634 accaagtgagataagctca 652  Q
    |||||||||  ||||||||    
T  40209992 accaagtgatctaagctca 40210010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 549 - 653
Target Start/End: Complemental strand, 22779327 - 22779222
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 647  Q
    |||||||||||||||  ||||||||||||||||||||||||  |||||||||||  | | |||  ||| |||||||||||| |||||||||||||| |||    
T  22779327 ggctagagaaattcattttaaaggtgaataagtggggtgtttggggttcgaaccccgactcctgtataaaatatgcattatcccttaccaagtgagctaa 22779228  T
Q  648 gctcac 653  Q
    ||||||    
T  22779227 gctcac 22779222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 2350351 - 2350419
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||    
T  2350351 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtggggtgttcggggttcgaacc 2350419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 10123029 - 10123097
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  10123029 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttggggttcgaacc 10123097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 534 - 633
Target Start/End: Original strand, 42946443 - 42946543
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||   |||||| || ||  |||||| ||||||||||||||||| |||    
T  42946443 gtcaagtagcctaacggctagagaaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatataatatgcattatccct 42946542  T
Q  633 t 633  Q
    |    
T  42946543 t 42946543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 25031473 - 25031527
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  25031473 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgt 25031527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 545 - 653
Target Start/End: Original strand, 1862827 - 1862935
Alignment:
Q  545 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgaga 644  Q
    ||||||||||||||||||||||| ||||| |||| |||| ||||    ||||  ||||||  |||| ||||||||||||||||| ||||| ||||||||     
T  1862827 tagcggctagagaaattcaccttcaaggtaaatatgtggagtgtctgaggtttaaaccttaacccttcatataatatgcattatcccttatcaagtgagc 1862926  T
Q  645 taagctcac 653  Q
    |||||||||    
T  1862927 taagctcac 1862935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 3347679 - 3347747
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  3347679 gtcaagcagcctagtgactagagaaattcaccttaaagatgaataagtggggtgtacggggttcgaacc 3347747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 43109214 - 43109333
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||| || |||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  43109214 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataaatgaggtgtccggggttcgaaccccggcccctgcacatattttgcattatccct 43109313  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  43109314 taccaaatgagctaagctca 43109333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 549 - 597
Target Start/End: Original strand, 27980124 - 27980172
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttc 597  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  27980124 ggctagagaaatttaccttaaaggtgaataagtggggtgttaggggttc 27980172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 40061562 - 40061443
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||   | ||||||| ||  ||||||| | ||| | |||| ||| |||    
T  40061562 gtcaagtagcctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggagttcgaaccccagcccctatacatattgtgcactatccct 40061463  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  40061462 taccaaatgagttaagctca 40061443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 49620091 - 49619972
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||   ||||  |||||  | ||||| || ||| | |||||||| |||    
T  49620091 gtcaagtagcctagtggctagagaaattcactttaaagatgaataagtggggtgtccggggtctgaaccccgacccctgcacatattgtgcattatccct 49619992  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  49619991 taccaaatgagctaagctca 49619972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 550 - 652
Target Start/End: Complemental strand, 50011610 - 50011507
Alignment:
Q  550 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataag 648  Q
    |||||||||||||||||||||| |||||||||||| |||   ||||||||| ||  |||||| || ||| | |||||||| ||||||||| |||| ||||    
T  50011610 gctagagaaattcaccttaaagatgaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaag 50011511  T
Q  649 ctca 652  Q
    ||||    
T  50011510 ctca 50011507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 577 - 643
Target Start/End: Original strand, 34940436 - 34940502
Alignment:
Q  577 taagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgag 643  Q
    ||||||||||||   ||||||||||||  ||||| ||||||||||||||||| ||||||||||||||    
T  34940436 taagtggggtgtccggggttcgaacctgacccctgcatataatatgcattatcccttaccaagtgag 34940502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 555 - 632
Target Start/End: Complemental strand, 35111747 - 35111669
Alignment:
Q  555 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataat-atgcattattcct 632  Q
    |||||||||| || || ||||||||||||||||||| |||||||||||  |||||| |||||||| ||||||| |||||    
T  35111747 agaaattcacttttaaagtgaataagtggggtgttaggggttcgaaccccgcccctgcatataataatgcattgttcct 35111669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 534 - 587
Target Start/End: Complemental strand, 27054815 - 27054762
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtg 587  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  27054815 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgaggtg 27054762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 554 - 602
Target Start/End: Complemental strand, 8893959 - 8893911
Alignment:
Q  554 gagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||    
T  8893959 gagaaattcaccttaaagatgaataagtggggtgtttggggttcgaacc 8893911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 549 - 652
Target Start/End: Original strand, 14262712 - 14262816
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||||||||||||||||||| ||||||||| ||||||   |||||||||||  | ||||| |||||| | |||||||| ||||| ||| |||| |||    
T  14262712 ggctagagaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacccctgcatatattgtgcattatcccttatcaaatgagttaa 14262811  T
Q  648 gctca 652  Q
     ||||    
T  14262812 tctca 14262816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 633
Target Start/End: Complemental strand, 25299978 - 25299878
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| |||||||||||| ||||||||||||||  |||||||  ||||||||||  ||||| |||||| || ||||| ||||||  ||||||||| |||    
T  25299978 gtcaagtagcctagcggctggagaaattcaccttcgaggtgaaatagtggggtgtccagggtacgaaccctgacccctgcatatataatgcattatccct 25299879  T
Q  633 t 633  Q
    |    
T  25299878 t 25299878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 637
Target Start/End: Original strand, 31964592 - 31964696
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||| ||||||||||| ||||| || |||||| |||||||||| ||||||  |||||| |||| ||   ||||||||||||||||||| |||||    
T  31964592 gtcaagtagcttagcggctagaaaaatttactttaaagatgaataagtgaggtgttcggggttcaaaccctgtttcctacatataatatgcatttttcct 31964691  T
Q  633 tacca 637  Q
     ||||    
T  31964692 cacca 31964696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 541 - 652
Target Start/End: Complemental strand, 44583699 - 44583588
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaag 639  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||   | |||||||||  | |||||||||| || ||| ||||| ||||| |||     
T  44583699 agcctatcggctagagaaattcaccttaaaggtgaataggtggagtgtccggagttcgaaccccgacccctacatacaa-atgtattatcccttatcaaa 44583601  T
Q  640 tgagataagctca 652  Q
    |||| ||||||||    
T  44583600 tgagttaagctca 44583588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 7438740 - 7438621
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| || |||| ||||| ||||||||||||| ||| ||||||||||||||||   | |||||||||  | |||||||| | | | |||||||| |||    
T  7438740 gtcaagtagtctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggagttcgaaccccgacccctacacaaattgtgcattatccct 7438641  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  7438640 taccaaatgagctaagctca 7438621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 12973254 - 12973373
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 632  Q
    |||||| || |||| ||||| ||||||| ||||||||| |||||||||||||||| | | ||| ||| ||  |||||| |||||| | |||||||| |||    
T  12973254 gtcaagtagtctagtggctaaagaaatttaccttaaagatgaataagtggggtgtcaggagtttgaatctcggcccctgcatatattgtgcattatccct 12973353  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||| ||||    
T  12973354 taccaaatgagctaaactca 12973373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 15417793 - 15417912
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| | ||||||||||||| ||||||| ||||||||||||||||    | |||||| ||  ||||||||| ||| | |||||||| | |    
T  15417793 gtcaagtagcctagtgactagagaaattcatcttaaagatgaataagtggggtgtccgagcttcgaaccccagcccctacacatattgtgcattatcctt 15417892  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  15417893 taccaaatgagctaagctca 15417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 34702289 - 34702408
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| || |||| ||||| ||||||||| ||||||| |||||||||| |||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  34702289 gtcaagtagtctagtggctaaagaaattcatcttaaagatgaataagtgaggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 34702388  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  34702389 taccaaatgagctaagctca 34702408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 47651990 - 47651872
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| |||| || ||||||||||||||||||||||  |||||||||||| |||  ||| |||||| ||  |||||| || ||| | |||||||| |||    
T  47651990 gtcaagtagcccagtggctagagaaattcaccttaaa-atgaataagtgggatgtctaggattcgaaccccagcccctgcacatattgtgcattatccct 47651892  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  47651891 taccaaatgagctaagctca 47651872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 549 - 588
Target Start/End: Complemental strand, 50065114 - 50065075
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  50065114 ggctagagaaattcaccttaaagatgaataagtggggtgt 50065075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 12148549 - 12148603
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||||| |||| | | ||||||||||||||||||| ||||||||||||||||    
T  12148549 gtcaagcagtctagtgtccagagaaattcaccttaaagatgaataagtggggtgt 12148603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 46532471 - 46532525
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| ||| |||||| |||||||||||||||||||||||||  ||||||||||    
T  46532471 gtcaagtagcttagcggttagagaaattcaccttaaaggtgaaatagtggggtgt 46532525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 49239823 - 49239877
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| ||| ||| ||||||||||||| ||||||||| ||||||||||||||||    
T  49239823 gtcaagtagcttagtggctagagaaatttaccttaaagatgaataagtggggtgt 49239877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 534 - 603
Target Start/End: Original strand, 16985911 - 16985980
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 603  Q
    |||||| | ||||| ||||||||||||||||||||||| |||||||||  |||||   ||||||||||||    
T  16985911 gtcaagtaacctagtggctagagaaattcaccttaaagatgaataagttaggtgtccggggttcgaacct 16985980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 589
Target Start/End: Original strand, 20267885 - 20267922
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgtt 589  Q
    |||||||||||||||||||||| |||||||||||||||    
T  20267885 tagagaaattcaccttaaaggtaaataagtggggtgtt 20267922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 47428886 - 47428939
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||| |||||||||| |||||| |||||||||||||||||  |||||||||||    
T  47428886 ggctaaagaaattcactttaaagatgaataagtggggtgtttggggttcgaacc 47428939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 589
Target Start/End: Complemental strand, 49895836 - 49895799
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgtt 589  Q
    |||||||||||| |||||||||||||||||||||||||    
T  49895836 tagagaaattcatcttaaaggtgaataagtggggtgtt 49895799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 545 - 652
Target Start/End: Original strand, 22853748 - 22853856
Alignment:
Q  545 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtgag 643  Q
    ||||| ||||||||||||| |||||| | |||||||||  |||||   |||||||||||  ||||||||||||  |||| ||||| ||||| ||| ||||    
T  22853748 tagcgtctagagaaattcatcttaaaagagaataagtgaagtgtttgaggttcgaacctcagcccctacatattctatgtattatcccttatcaaatgag 22853847  T
Q  644 ataagctca 652  Q
     ||||||||    
T  22853848 ttaagctca 22853856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 555 - 599
Target Start/End: Complemental strand, 35309822 - 35309778
Alignment:
Q  555 agaaattcaccttaaaggtgaataagtggggtgttaagggttcga 599  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||    
T  35309822 agaaattcaccttaaagatgaataagtggggtgttcggggttcga 35309778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 41618736 - 41618804
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| || || |||||||||||||||||||||||| |||||||| || ||||||  || ||||||||    
T  41618736 gtcaagtagtctggcggctagagaaattcaccttaaatgtgaataactgaggtgttcgggattcgaacc 41618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 541 - 588
Target Start/End: Original strand, 10790476 - 10790523
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| |||||| ||||||||||||||||||| ||||||| ||||||    
T  10790476 agcctaacggctacagaaattcaccttaaaggtaaataagtagggtgt 10790523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 23368708 - 23368775
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    |||||| || |||| ||||||| ||||||||||| || |||||||||||||||||   ||||||||||    
T  23368708 gtcaagtagactagtggctagataaattcacctttaatgtgaataagtggggtgtccggggttcgaac 23368775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 48497189 - 48497308
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||| ||||||||| ||||||| ||| ||||   || ||||||| |  |||||| || ||| | |||||||| |||    
T  48497189 gtcaagtagcctagtggctagagaaatttaccttaaagatgaataaatggagtgtccgggattcgaactccggcccctgcacatattgtgcattatccct 48497288  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||| ||||    
T  48497289 taccaaatgagctaaactca 48497308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 558 - 618
Target Start/End: Complemental strand, 1031683 - 1031621
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataa 618  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||  |||||||||||||    
T  1031683 aattcaccttataaggtgaataagtggggtgttcggggttcgaactctgacccctacatataa 1031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 4127018 - 4126964
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| || |||| ||||||| ||||||||||||||| ||||||| ||||||||    
T  4127018 gtcaagtagtctagtggctagataaattcaccttaaagatgaataaatggggtgt 4126964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 544 - 602
Target Start/End: Original strand, 50302837 - 50302894
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||| ||||||||||||||||||||||| ||||||||| | ||| | ||||||||||||    
T  50302837 ctagtggctagagaaattcaccttaaagatgaataagtagagtg-tcagggttcgaacc 50302894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 535 - 643
Target Start/End: Complemental strand, 7006710 - 7006601
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattcctt 633  Q
    ||||| ||| ||||||| ||| |||||||| ||||| |||||||| | |||| ||  |||||| ||||   ||| || |||||||||||||||||  |||    
T  7006710 tcaagtagcatagcggccagataaattcactttaaatgtgaataaattgggtattcggggttcaaaccccagcctctgcatataatatgcattatctctt 7006611  T
Q  634 accaagtgag 643  Q
    ||||||||||    
T  7006610 accaagtgag 7006601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 535 - 588
Target Start/End: Original strand, 29936658 - 29936711
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||| ||||||  |||||||||||||||| || ||| ||||||||||||||||    
T  29936658 tcaagtagcctaatggctagagaaattcacttttaagatgaataagtggggtgt 29936711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 541 - 620
Target Start/End: Complemental strand, 39238826 - 39238748
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 620  Q
    |||||||||||||||  ||||||| || || |||||||||||||||||   ||||||||||||  |||||| |||||||||    
T  39238826 agcctagcggctaga--aattcacttttaaagtgaataagtggggtgtccggggttcgaacctcggcccctgcatataata 39238748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 4e-50; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 759 - 950
Target Start/End: Original strand, 48826723 - 48826914
Alignment:
Q  759 gagaaagtggctgaagcgggcgcgat-gtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaag 857  Q
    ||||||| ||||||||||||||| || | |||| |||||||  ||||||||||||||| ||||||||||  || |||||||||||||||||||||||||     
T  48826723 gagaaagcggctgaagcgggcgcaattgcgggtcaaagcgggtgctttttactcccctatgtaaaatacgggactgcccttcacttaaaaccgttttaaa 48826822  T
Q  858 ggtcattttttgtaattttcaaaacgctaactat-actcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtacaaac 950  Q
    | |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  48826823 g-tcattttt-gtaattttcaaaaccctaactattactcttctccatcagaaccaaatacacagccgcaaatacaacttcttcatcgtacaaac 48826914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 787 - 946
Target Start/End: Complemental strand, 33516583 - 33516424
Alignment:
Q  787 gggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgcta 886  Q
    |||| ||||||| |||||||  |  ||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||| |||||||||||||| |||    
T  33516583 gggtcaaagcgggcgcttttagcaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtca-ttttggtaattttcaaaacccta 33516485  T
Q  887 acta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    |||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  33516484 actattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 33516424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 793 - 919
Target Start/End: Original strand, 11591420 - 11591545
Alignment:
Q  793 aagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaacta-t 891  Q
    |||||| ||||||| ||  ||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||||| ||||| ||||||| |    
T  11591420 aagcgggcgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtca-tttttgtaatttttaaaaccctaactatt 11591518  T
Q  892 actcttctccatcagaaccaaatacaca 919  Q
    ||||||||||| ||||||||||||||||    
T  11591519 actcttctcca-cagaaccaaatacaca 11591545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 817 - 942
Target Start/End: Complemental strand, 46067326 - 46067201
Alignment:
Q  817 tgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaacta-tactcttctccatcagaaccaaata 915  Q
    |||||||||| ||||| ||| ||| |||||||||||||||| |||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  46067326 tgtaaaatactagatttcccatcatttaaaaccgttttaagtgtca-tttttgtaattttcaaaaccctaactattactcttctccaccagaaccaaata 46067228  T
Q  916 cacaactgcaaaaacaacttcttcatc 942  Q
    |||| |  ||||  |||||||||||||    
T  46067227 cacagccacaaactcaacttcttcatc 46067201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 26606085 - 26606204
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||| || ||  |||||||||||| || ||||||||||||    
T  26606085 gtcaagtagccaagcggctagagaaattcaccttaaaggtgaataagtggagtgtccagggttcaaaccccggcccctacatatgatttgcattattcct 26606184  T
Q  633 taccaagtgagataagctca 652  Q
    || |||||||  ||||||||    
T  26606185 tatcaagtgaactaagctca 26606204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 535 - 652
Target Start/End: Complemental strand, 15025274 - 15025156
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcctt 633  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||| ||  ||||||  ||| |||||||||||| ||||    
T  15025274 tcaagtagcctagcgggtagagaaattcaccttaaaggtgaataagtggggtgttcggggtttgaaccccggcccctgtataaaatatgcattatccctt 15025175  T
Q  634 accaagtgagataagctca 652  Q
    ||||| |||| ||||||||    
T  15025174 accaaatgagttaagctca 15025156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 5228189 - 5228071
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||  |||||| |||| || ||||||||| | |    
T  5228189 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccaggattcgaaccccggcccctgcata-aaaatgcattatcctt 5228091  T
Q  633 taccaagtgagataagctca 652  Q
    || |||||||| ||||||||    
T  5228090 tatcaagtgagctaagctca 5228071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 544 - 654
Target Start/End: Complemental strand, 46243400 - 46243289
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaagtga 642  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  | |||||||| |    ||||| |||||||||||||||| ||||||||| |||    
T  46243400 ctagcggttagagaaattcaccttaaaggtgaataagtggggtgttcggagttcgaactccgatccctatatataatatgcattatcccttaccaaatga 46243301  T
Q  643 gataagctcaca 654  Q
    | ||||||||||    
T  46243300 gctaagctcaca 46243289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 534 - 653
Target Start/End: Original strand, 9668792 - 9668910
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||||  ||||||||||| | | |||| |||| |||||||||||| |||    
T  9668792 gtcaagtagcctagcggccagagaaattcaccttaa-ggtgaataaatgaggtgtttggggttcgaaccctagtccctgcata-aatatgcattatccct 9668889  T
Q  633 taccaagtgagataagctcac 653  Q
    ||||||||||| |||||||||    
T  9668890 taccaagtgagctaagctcac 9668910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 534 - 643
Target Start/End: Original strand, 28914853 - 28914964
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg--cccctacatataatatgcattattcc 631  Q
    |||||| ||||||| ||||||||||||||||||| || |||||||||||||||||   |||||||||||  |  ||||| ||||||||||||||||| ||    
T  28914853 gtcaagtagcctagtggctagagaaattcacctttaaagtgaataagtggggtgtccggggttcgaaccccggccccctgcatataatatgcattatccc 28914952  T
Q  632 ttaccaagtgag 643  Q
    |||||| |||||    
T  28914953 ttaccatgtgag 28914964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 851 - 946
Target Start/End: Original strand, 43613823 - 43613918
Alignment:
Q  851 ttttaagggtcattttttgtaattttcaaaacgctaactat-actcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  43613823 ttttaagggtcattttt-gtaattttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 43613918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 534 - 638
Target Start/End: Original strand, 4956068 - 4956173
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  | ||||| || ||| | |||||||| |||    
T  4956068 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccagggttcgaaccccgacccctgcacatattgtgcattatccct 4956167  T
Q  633 taccaa 638  Q
    ||||||    
T  4956168 taccaa 4956173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 534 - 654
Target Start/End: Complemental strand, 23602393 - 23602272
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 632  Q
    |||||| || |||| ||||| |||||||||||||||||||||||||||| |||||   |||||||||| |  | | || |||||||||||||||||||||    
T  23602393 gtcaagtagtctagtggctaaagaaattcaccttaaaggtgaataagtgaggtgtccggggttcgaactccggtcactgcatataatatgcattattcct 23602294  T
Q  633 taccaagtgagataagctcaca 654  Q
    || ||| |||| ||||||||||    
T  23602293 tatcaaatgagctaagctcaca 23602272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 48433686 - 48433805
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||| ||| ||  |||||| || ||| | |||||||| |||    
T  48433686 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggtttgaaccccggcccctgcacatattgtgcattatccct 48433785  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  48433786 taccaaatgagctaagctca 48433805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 541 - 654
Target Start/End: Original strand, 44662446 - 44662560
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaag 639  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||   ||||||||| ||  |||||| |||| |  ||||||||| ||||||| ||    
T  44662446 agcctagcggctggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatcccttacctag 44662545  T
Q  640 tgagataagctcaca 654  Q
    |||| ||||||||||    
T  44662546 tgagctaagctcaca 44662560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 534 - 651
Target Start/End: Original strand, 6548688 - 6548805
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 633  Q
    |||||| |||||||||||  |||||||||||||||||||||||  ||||||||||   | |||||||||  | |||| |||| |  ||||||||||||||    
T  6548688 gtcaagtagcctagcggccggagaaattcaccttaaaggtgaaatagtggggtgtccggagttcgaaccccggccctgcatacataatgcattattcctt 6548787  T
Q  634 accaagtgagataagctc 651  Q
    || ||||||| |||||||    
T  6548788 actaagtgagctaagctc 6548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 652
Target Start/End: Complemental strand, 40273925 - 40273821
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| ||||||||| |||| |||    
T  40273925 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 40273826  T
Q  648 gctca 652  Q
    |||||    
T  40273825 gctca 40273821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 14707411 - 14707293
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| || ||| |||||||||||||||||  ||||||||||||||||||||||   ||||||||| ||   ||||| ||||||| ||||||||| |||    
T  14707411 gtcaagtagtctaacggctagagaaattcactataaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatataa-atgcattatccct 14707313  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  14707312 taccaaatgagctaagctca 14707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 10091448 - 10091501
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  10091448 ggctagagaaattcaccttaaaggtgaataagttgggtgtctagggttcgaacc 10091501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 541 - 653
Target Start/End: Complemental strand, 29357912 - 29357800
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagt 640  Q
    |||||||||||   ||||||||||||||||||||||  ||||| ||||  |||||||||||   | |||| ||||||  ||||||||| ||||| |||||    
T  29357912 agcctagcggccgaagaaattcaccttaaaggtgaaatagtggagtgtccagggttcgaactccggccctgcatatataatgcattatcccttatcaagt 29357813  T
Q  641 gagataagctcac 653  Q
    ||| |||||||||    
T  29357812 gagctaagctcac 29357800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 31793587 - 31793468
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| | ||||| |||||||||||| |||||||||| ||||||||||||||||   |||||||||||  | ||||| || ||| | |||||||| |||    
T  31793587 gtcaagtaacctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgcacatattgtgcattatccct 31793488  T
Q  633 taccaagtgagataagctca 652  Q
    || ||| |||| ||||||||    
T  31793487 taacaaatgagctaagctca 31793468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 20530015 - 20529961
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| |||| | || ||||||||||||||||||||||||||||||||||||||    
T  20530015 gtcaagtagcccaacgactagagaaattcaccttaaaggtgaataagtggggtgt 20529961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 543 - 652
Target Start/End: Original strand, 23824577 - 23824686
Alignment:
Q  543 cctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtg 641  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||| |  ||||||||||||  |||| | || ||| | |||||||| ||||||||| ||    
T  23824577 cctagtggctagagaaattcaccttaaagatgaataagtagggtg-tccgggttcgaacctcggcccatgcacatattgtgcattatcccttaccaaatg 23824675  T
Q  642 agataagctca 652  Q
    || ||||||||    
T  23824676 agctaagctca 23824686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 544 - 653
Target Start/End: Complemental strand, 37665853 - 37665743
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtga 642  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||   ||||| ||| ||  |||||| |||||||||||  |||| | ||||||| |||    
T  37665853 ctagtggctaaagaaattcaccttaaaggcgaataagtggggtgtccggggtttgaaccccggcccctgcatataatatgttttatcctttaccaaatga 37665754  T
Q  643 gataagctcac 653  Q
    | |||||||||    
T  37665753 gttaagctcac 37665743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 46196037 - 46195983
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||    
T  46196037 gtcaagcagactagcggctggagaaattcaccttaaaggtgaaatagtggggtgt 46195983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 546 - 602
Target Start/End: Original strand, 10624786 - 10624841
Alignment:
Q  546 agcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||  |||||||||||    
T  10624786 agcggctagagaaattcaccttaaa-gtgaataagtgcggtgtttggggttcgaacc 10624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 550 - 602
Target Start/End: Complemental strand, 12166185 - 12166133
Alignment:
Q  550 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  12166185 gctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaacc 12166133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 549 - 652
Target Start/End: Complemental strand, 24030089 - 24029985
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||||||||||||||||||| ||||||| ||||||||   ||||||||| ||  ||||||||| ||| | |||||||| ||||| ||| |||| |||    
T  24030089 ggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaaccccggcccctacacatattgtgcattatcccttatcaaatgagctaa 24029990  T
Q  648 gctca 652  Q
     ||||    
T  24029989 actca 24029985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 27454131 - 27454011
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcacc-ttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcc 631  Q
    |||||| ||||||| ||||||||||||||||| || ||| ||||||||||||||||    ||||||||||| | ||||| || | | | |||||||| ||    
T  27454131 gtcaagtagcctagtggctagagaaattcaccttttaagatgaataagtggggtgtccgaggttcgaacctcgacccctgcacaaattgtgcattatccc 27454032  T
Q  632 ttaccaagtgagataagctca 652  Q
    ||||||| |||| ||||||||    
T  27454031 ttaccaaatgagctaagctca 27454011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 544 - 588
Target Start/End: Complemental strand, 43440798 - 43440754
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||    
T  43440798 ctagtggctagagaaattcaccttaaagatgaataagtggggtgt 43440754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 551 - 603
Target Start/End: Original strand, 47324476 - 47324528
Alignment:
Q  551 ctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 603  Q
    ||||||||||||||||||||||||| |||||||||||| |  |||||||||||    
T  47324476 ctagagaaattcaccttaaaggtgattaagtggggtgtcagaggttcgaacct 47324528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 541 - 601
Target Start/End: Original strand, 48258167 - 48258227
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||   ||||||||||    
T  48258167 agcctagcggctagacaaattcactttaaaggtgaataaatggggtgtccggggttcgaac 48258227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 549 - 643
Target Start/End: Complemental strand, 48525681 - 48525586
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgag 643  Q
    ||||||||||||  | |||||||||||||||||| |||||   |||||||||||    ||||| ||||||||||||||| | ||||||||||||||    
T  48525681 ggctagagaaatctaacttaaaggtgaataagtgaggtgtccggggttcgaaccccaacccctgcatataatatgcattgtcccttaccaagtgag 48525586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 576
Target Start/End: Original strand, 13295351 - 13295393
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaa 576  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  13295351 gtcaagtagcctagcggctggagaaattcaccttaaaggtgaa 13295393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 553 - 603
Target Start/End: Original strand, 25775608 - 25775658
Alignment:
Q  553 agagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 603  Q
    ||||||||||||||||||| |||||||||||||||||  | ||||||||||    
T  25775608 agagaaattcaccttaaagatgaataagtggggtgtttggagttcgaacct 25775658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 552 - 633
Target Start/End: Complemental strand, 40011813 - 40011731
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 633  Q
    ||||||||||||| ||||| || |||||||||| ||||  |||||||||||| | ||||| ||||||||||| ||||| ||||    
T  40011813 tagagaaattcactttaaaagtaaataagtgggatgttcggggttcgaacctcgacccctgcatataatatgtattatccctt 40011731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 543 - 584
Target Start/End: Complemental strand, 20013691 - 20013650
Alignment:
Q  543 cctagcggctagagaaattcaccttaaaggtgaataagtggg 584  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  20013691 cctagcggctagagaaattcatcttaaaggtggataagtggg 20013650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 650
Target Start/End: Complemental strand, 32376547 - 32376442
Alignment:
Q  545 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgaga 644  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||    | ||| |||||    ||| ||||||||||||||| | ||||||||||| ||     
T  32376547 tagcggctaaagaaattcaccttaaagttgaataaatggggtgtccgagattcaaacctcattcctgcatataatatgcattgtcccttaccaagtaagc 32376448  T
Q  645 taagct 650  Q
    ||||||    
T  32376447 taagct 32376442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 536 - 588
Target Start/End: Complemental strand, 48619913 - 48619861
Alignment:
Q  536 caagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||| ||| ||| ||||||||||||||||||||||| ||||||||||| ||||    
T  48619913 caagtagcttagtggctagagaaattcaccttaaagatgaataagtggagtgt 48619861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 552 - 652
Target Start/End: Original strand, 3889794 - 3889896
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg--cccctacatataatatgcattattccttaccaagtgagataagc 649  Q
    |||||||||||||||| ||| ||||||||||||||||   ||||||||||| ||  ||||| |||||| | | |||||| ||||  ||| |||| |||||    
T  3889794 tagagaaattcacctttaagatgaataagtggggtgtccggggttcgaaccctggccccctgcatatattgtacattatcccttgtcaaatgagctaagc 3889893  T
Q  650 tca 652  Q
    |||    
T  3889894 tca 3889896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 545 - 588
Target Start/End: Complemental strand, 24575258 - 24575215
Alignment:
Q  545 tagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||    
T  24575258 tagcggttagagaaattcatcttaaaggtgaataagtagggtgt 24575215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 553 - 643
Target Start/End: Original strand, 25770037 - 25770128
Alignment:
Q  553 agagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtgag 643  Q
    |||||||||||| |||||| |||||||||||||||||  | ||||||||||  |  | |||||||| ||| |||||| | ||||||||||||    
T  25770037 agagaaattcactttaaagatgaataagtggggtgtttggagttcgaacctcggttcttacatatattatacattatcctttaccaagtgag 25770128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 551 - 589
Target Start/End: Original strand, 35307926 - 35307965
Alignment:
Q  551 ctagagaaattcaccttaaaggtgaat-aagtggggtgtt 589  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  35307926 ctagagaaattcaccttaaaggtgaataaagtggggtgtt 35307965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 545 - 588
Target Start/End: Original strand, 36977228 - 36977271
Alignment:
Q  545 tagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||    
T  36977228 tagcggctagagaaactcaccttaaaggtgaataaatagggtgt 36977271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 551 - 602
Target Start/End: Original strand, 42841774 - 42841825
Alignment:
Q  551 ctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||||||||| ||| ||||||||||||||||   |||||||||||    
T  42841774 ctagagaaattcacctttaagatgaataagtggggtgtctggggttcgaacc 42841825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 658 - 688
Target Start/End: Original strand, 16366600 - 16366630
Alignment:
Q  658 actccatttattttgtcaaatggagaggatc 688  Q
    |||||||||||||||||||||||||||||||    
T  16366600 actccatttattttgtcaaatggagaggatc 16366630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 555 - 652
Target Start/End: Original strand, 33248799 - 33248897
Alignment:
Q  555 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctca 652  Q
    ||||||||||||||||| ||||||||| ||||||   |||||||||||  | || || |||||| | ||||| || ||||||||| |||| ||||||||    
T  33248799 agaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacctctgcatatattgtgcatcatcccttaccaaatgagctaagctca 33248897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 38378338 - 38378284
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| ||| ||| || |||||||||||||||||||  ||||||||||||||||    
T  38378338 gtcaagtagcttagtgggtagagaaattcaccttaaaaatgaataagtggggtgt 38378284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 658 - 688
Target Start/End: Original strand, 44648046 - 44648076
Alignment:
Q  658 actccatttattttgtcaaatggagaggatc 688  Q
    |||||||||||||||||||||||||||||||    
T  44648046 actccatttattttgtcaaatggagaggatc 44648076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 659 - 688
Target Start/End: Original strand, 4888550 - 4888579
Alignment:
Q  659 ctccatttattttgtcaaatggagaggatc 688  Q
    ||||||||||||||||||||||||||||||    
T  4888550 ctccatttattttgtcaaatggagaggatc 4888579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 535 - 588
Target Start/End: Original strand, 26455982 - 26456035
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||| || |||| ||||||||||||||||||| ||||||||||| ||| ||||    
T  26455982 tcaagtagtctagtggctagagaaattcacctttaaggtgaataactggagtgt 26456035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 534 - 579
Target Start/End: Original strand, 33342795 - 33342840
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataa 579  Q
    |||||| || ||||||||||||||||||||||||||  ||||||||    
T  33342795 gtcaagtagtctagcggctagagaaattcaccttaacagtgaataa 33342840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Complemental strand, 46716429 - 46716384
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  46716429 aattcaccttataaggtaaataagtggggtgttcagggttcgaacc 46716384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 100; Significance: 7e-49; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 772 - 946
Target Start/End: Original strand, 7814 - 7988
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||| |||||||||| ||||||| | ||||||||  |||||||||||||||| |||| ||||||||||||||||  |||||||||  |||||||||    
T  7814 aagcgggcacgatgtgggtcaaagcgggcactttttacaaccctgtgtaaaatacaggatttcccttcacttaaaacc-atttaagggttcttttttgta 7912  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  7913 attttcaaaaccctaactattactcttctccatcagaaccaaatacacagccgcaaacacaacttcttcatcgtac 7988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 92; Significance: 4e-44; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 772 - 946
Target Start/End: Original strand, 18675 - 18849
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||||||||| |||| ||||||| ||| ||| ||  ||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  18675 aagcgggcgcgatgcgggtcaaagcgggcgcatttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtca-tttttgta 18773  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  18774 attttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 18849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 2e-42; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 772 - 946
Target Start/End: Original strand, 38566559 - 38566733
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||||||||| |||| ||||||| ||||||| |   ||||||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  38566559 aagcgggcgcgatgcgggtcaaagcgggcgcttttgancaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtca-tttttgta 38566657  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  ||||||||||| |||||    
T  38566658 attttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcaccgtac 38566733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 541 - 654
Target Start/End: Original strand, 19957304 - 19957418
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaag 639  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| | ||||| ||||||||||||||||| ||||||||||    
T  19957304 agcctagctgctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatcccttaccaag 19957403  T
Q  640 tgagataagctcaca 654  Q
    |||| |||| |||||    
T  19957404 tgagctaagttcaca 19957418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 11052560 - 11052679
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattcct 632  Q
    |||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||  ||||| |||||| || |  || |||||||| |||    
T  11052560 gtcaagtaacctagtggctagagaaattcaccttaaagatgaataagtggggtgtttagggttcacaccttggcccctgcacaatatgtgcattatccct 11052659  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  11052660 taccaaatgagttaagctca 11052679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 1032689 - 1032570
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    ||||||||| | || ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  1032689 gtcaagcagtccagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacatattgtgcattatccct 1032590  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  1032589 taccaaatgagctaagctca 1032570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 534 - 650
Target Start/End: Original strand, 38289211 - 38289328
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||   ||||||||||  | ||||| || ||| | |||||||| |||    
T  38289211 gtcaagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtttgaggttcgaaccccgacccctgcacatattgtgcattatccct 38289310  T
Q  633 taccaagtgagataagct 650  Q
    |||||| |||| ||||||    
T  38289311 taccaaatgagctaagct 38289328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 43413862 - 43413930
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||  || ||||||||    
T  43413862 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttgggattcgaacc 43413930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 4259978 - 4259859
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||   ||||| ||| ||  |||||| || ||| | |||||||| |||    
T  4259978 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggagtccggggttggaaccccggcccctgcacatattgtgcattatccct 4259879  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  4259878 taccaaatgagttaagctca 4259859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 8145892 - 8145838
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  8145892 gtcaagtagcgtagcggttagagaaattcaccttaaaggtgaataagtggggtgt 8145838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 535 - 638
Target Start/End: Complemental strand, 10201380 - 10201276
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 633  Q
    ||||| ||| || ||||||||||||||||| |||||||||||||| || |||||   |||||||||||  | |||||||||||| ||||||||||  |||    
T  10201380 tcaagtagcttaacggctagagaaattcactttaaaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatatattatgcattatctctt 10201281  T
Q  634 accaa 638  Q
    |||||    
T  10201280 accaa 10201276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 549 - 652
Target Start/End: Original strand, 41454818 - 41454922
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 647  Q
    |||||||||||||||| |||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| ||||||||| |||| |||    
T  41454818 ggctagagaaattcacattaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 41454917  T
Q  648 gctca 652  Q
    |||||    
T  41454918 gctca 41454922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 534 - 650
Target Start/End: Original strand, 19733045 - 19733162
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||| ||| || |||||||||||||||||||| ||||||| |  ||||||  || ||||||||  | ||||| |||||| |||||||||| |||    
T  19733045 gtcaagtagcttagtggttagagaaattcaccttaaagatgaataatttaggtgttcgggattcgaaccccgacccctgcatatattatgcattatccct 19733144  T
Q  633 taccaagtgagataagct 650  Q
    |||||| |||| ||||||    
T  19733145 taccaaatgagctaagct 19733162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 558 - 628
Target Start/End: Original strand, 34073238 - 34073311
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataat-atgcattat 628  Q
    ||||||||||| ||||||||||||||||||||   |||||||||||||| |||||||||||||| |||||||||    
T  34073238 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccttgacccctacatataataatgcattat 34073311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 17855768 - 17855700
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| | ||||||||||||| |||||||| ||||| |||||||||||||||||   |||||||||||    
T  17855768 gtcaagtaacctagcggctagaaaaattcactttaaatgtgaataagtggggtgtccggggttcgaacc 17855700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 39172189 - 39172307
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||| |||||||||| |||||||||||||| ||||||||   || ||||||| |  ||| ||||||| || ||||||||| | |    
T  39172189 gtcaagtagcctaggggctaaagaaattcactttaaaggtgaataaatggggtgtccgggattcgaacttcggcctctacatacaa-atgcattatcctt 39172287  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  39172288 taccaaatgagttaagctca 39172307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 643
Target Start/End: Original strand, 43508426 - 43508534
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||||| ||||| |||||||  |||||||||| ||||||||||||||||||||   |||||| || ||  ||||||||||||| |||||||| | |||    
T  43508426 gtcaagcaacctagtggctaga--aattcacctttaaggtgaataagtggggtgtccggggttcaaaccccggcccctacatatattatgcattgtccct 43508523  T
Q  633 taccaagtgag 643  Q
    || ||| ||||    
T  43508524 tatcaactgag 43508534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 535 - 652
Target Start/End: Original strand, 10621352 - 10621470
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 633  Q
    ||||| |||||||||||   |||||||||| ||||||||||| || ||||||||   |||||| |||| || ||||| |||| |  ||||||||| ||||    
T  10621352 tcaagtagcctagcggcggaagaaattcacattaaaggtgaaaaaatggggtgtccggggttcaaaccctgacccctgcatacataatgcattatccctt 10621451  T
Q  634 accaagtgagataagctca 652  Q
    | |||||||| ||||||||    
T  10621452 atcaagtgagctaagctca 10621470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 535 - 652
Target Start/End: Complemental strand, 32822233 - 32822116
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcctt 633  Q
    ||||| ||| |||| || |||||||||||||||||| |||||| |||||| |||   |||||||||| |  ||||||| ||| || ||||||||| ||||    
T  32822233 tcaagtagcatagctgccagagaaattcaccttaaaagtgaatgagtgggatgtctggggttcgaactcccgcccctatatacaa-atgcattatccctt 32822135  T
Q  634 accaagtgagataagctca 652  Q
    ||||| |||| ||||||||    
T  32822134 accaaatgagttaagctca 32822116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 36587626 - 36587694
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||| |||| |||||||||| ||||||| | |||||||||||||||  ||||| |||||    
T  36587626 gtcaagtagcctagtggctcgagaaattcatcttaaagataaataagtggggtgttcggggttggaacc 36587694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 588
Target Start/End: Complemental strand, 38064078 - 38064042
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38064078 tagagaaattcaccttaaagatgaataagtggggtgt 38064042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 549 - 652
Target Start/End: Original strand, 41845420 - 41845524
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||| ||||||||||||||||| ||||||| | |||||||  |||||||||||  |  |||| || ||| | |||||||| ||||||||| |||| |||    
T  41845420 ggctaaagaaattcaccttaaagatgaataaatagggtgttcggggttcgaaccccgatccctgcacatattgtgcattatcccttaccaaatgagctaa 41845519  T
Q  648 gctca 652  Q
    |||||    
T  41845520 gctca 41845524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 544 - 643
Target Start/End: Original strand, 279983 - 280082
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgag 643  Q
    |||||| ||||||||||||||||||||  ||||||| | ||||||   ||||||||||| | ||||| || ||| | | |||||| ||||||||| ||||    
T  279983 ctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccctgcacatattgtacattatcccttaccaaatgag 280082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 544 - 643
Target Start/End: Complemental strand, 635869 - 635770
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgag 643  Q
    |||||| ||||||||||||||||||||  ||||||| | ||||||   ||||||||||| | ||||| || ||| | | |||||| ||||||||| ||||    
T  635869 ctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccctgcacatattgtacattatcccttaccaaatgag 635770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 544 - 643
Target Start/End: Complemental strand, 821672 - 821573
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgag 643  Q
    |||||| ||||||||||||||||||||  ||||||| | ||||||   ||||||||||| | ||||| || ||| | | |||||| ||||||||| ||||    
T  821672 ctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccctgcacatattgtacattatcccttaccaaatgag 821573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 1360111 - 1360229
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| || ||||||||||||| |||||  ||||||||||||||||   ||||||||| ||  ||||||||| ||| | |||||||| | |    
T  1360111 gtcaagtagcctagtggttagagaaattcactttaaa-atgaataagtggggtgtccggggttcgaaccccagcccctacacatattgtgcattatcctt 1360209  T
Q  633 taccaagtgagataagctca 652  Q
    | |||| |||| ||||||||    
T  1360210 tgccaaatgagctaagctca 1360229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 544 - 579
Target Start/End: Original strand, 3956731 - 3956766
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataa 579  Q
    |||| |||||||||||||||||||||||||||||||    
T  3956731 ctagtggctagagaaattcaccttaaaggtgaataa 3956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 541 - 588
Target Start/End: Original strand, 11690937 - 11690984
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||||  |||| ||||||||||||||||||||||||| ||||||||    
T  11690937 agcctagtagctaaagaaattcaccttaaaggtgaataaatggggtgt 11690984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 18080985 - 18080938
Alignment:
Q  606 cccctacatataatatgcattattccttaccaagtgagataagctcac 653  Q
    ||||| ||||||||||||||||| |||||||||||||| |||| ||||    
T  18080985 cccctgcatataatatgcattatcccttaccaagtgagttaagatcac 18080938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 22652802 - 22652683
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 632  Q
    |||||| ||| ||| ||||||||||||||||||| ||  ||||||| ||||||||   |||||||||| |  |||||| || | | |||||||||| |||    
T  22652802 gtcaagtagcttagtggctagagaaattcacctttaacatgaataattggggtgtccggggttcgaacaccggcccctgcacaaattatgcattatccct 22652703  T
Q  633 taccaagtgagataagctca 652  Q
    || ||| |||| ||||||||    
T  22652702 tatcaaatgagctaagctca 22652683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 553 - 651
Target Start/End: Original strand, 43456648 - 43456746
Alignment:
Q  553 agagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctc 651  Q
    ||||||| ||||||||||  ||||||||||||||||   |||||||||||  | ||| |||||||| | |||||||| ||||||||| |||| |||||||    
T  43456648 agagaaaatcaccttaaaa-tgaataagtggggtgtccggggttcgaaccccgacccttacatatattgtgcattatcccttaccaaatgagctaagctc 43456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 554 - 588
Target Start/End: Original strand, 3728224 - 3728258
Alignment:
Q  554 gagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||||||||||||||||||||||||| |||||    
T  3728224 gagaaattcaccttaaaggtgaataagtgaggtgt 3728258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 563 - 652
Target Start/End: Original strand, 36103927 - 36104017
Alignment:
Q  563 accttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataagctca 652  Q
    ||||||||| |||||||||||||||||  ||||||||| ||  |||||| || ||| | |||||||| | ||||||| |||| ||||||||    
T  36103927 accttaaagatgaataagtggggtgtttggggttcgaaccccggcccctgcacatattgtgcattatcctttaccaaatgagttaagctca 36104017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 584
Target Start/End: Complemental strand, 39104725 - 39104675
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 584  Q
    |||||| || |||| |||||||||||| |||||||||| ||||||||||||    
T  39104725 gtcaagtagtctagtggctagagaaatccaccttaaagatgaataagtggg 39104675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 5184886 - 5184931
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  5184886 aattcaccttataaggtgaataagtggggtgtccagggttcgaacc 5184931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 534 - 650
Target Start/End: Original strand, 8349459 - 8349576
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 632  Q
    |||||| || |||| || |||| ||||||| ||||||| |||||||||||||||||  | |||||||| |  |||||| |||||| | || |||||  ||    
T  8349459 gtcaagtagtctagtggttagataaattcatcttaaagatgaataagtggggtgttcggagttcgaactccggcccctgcatatattctgtattatcact 8349558  T
Q  633 taccaagtgagataagct 650  Q
    |||||| |||| ||||||    
T  8349559 taccaaatgagctaagct 8349576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 10199741 - 10199786
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||    
T  10199741 aattcaccttataaggtgaataagtggggtgtttggggttcgaacc 10199786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 612 - 653
Target Start/End: Complemental strand, 40444745 - 40444704
Alignment:
Q  612 catataatatgcattattccttaccaagtgagataagctcac 653  Q
    |||||| |||||||||| |||||||||||||| |||||||||    
T  40444745 catatattatgcattatcccttaccaagtgagctaagctcac 40444704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 4e-41; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 772 - 945
Target Start/End: Complemental strand, 33458534 - 33458361
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||||||||| |||| ||||||| ||||||| ||  ||||||||||||||| ||||| ||||||| ||||||||||||| |||||||| |||||||    
T  33458534 aagcgggcgcgatgcgggtcaaagcgggcgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttgagggtcat-ttttgta 33458436  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgta 945  Q
    ||||||||||| || |||| |||||||||||| |||||||||||||||| |  ||||  ||||||||||||||||    
T  33458435 attttcaaaaccctgactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgta 33458361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 772 - 942
Target Start/End: Complemental strand, 34479114 - 34478944
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    ||||||| |||||| |||| ||||||| | ||||| ||  ||||||||||||||  ||||| ||||||| |||||||||||||||||||||| |||||||    
T  34479114 aagcgggagcgatgcgggtcaaagcgggcacttttgacaaccctgtgtaaaatattagatttcccttcatttaaaaccgttttaagggtcat-ttttgta 34479016  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatc 942  Q
    ||||||||||| ||| ||| |||||||||||| | ||| |||||||||| |  ||||  |||||||||||||    
T  34479015 attttcaaaaccctacctattactcttctccaccggaatcaaatacacatccacaaactcaacttcttcatc 34478944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 534 - 653
Target Start/End: Complemental strand, 24202269 - 24202149
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    ||||||||||||||||||| |||||||||||||||||||||||  ||||||||||   ||||||||| ||  |||||| |||| |  ||||||||| |||    
T  24202269 gtcaagcagcctagcggctggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatccct 24202170  T
Q  633 taccaagtgagataagctcac 653  Q
    ||||||||||| |||||||||    
T  24202169 taccaagtgagctaagctcac 24202149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 534 - 643
Target Start/End: Complemental strand, 42541274 - 42541165
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||| ||  |||||| |||| ||||| |||||| |||    
T  42541274 gtcaagtagcctagcggctagagaaattcaccttaaaggtgagtaagtggggtgtctggggttcgaaccccagcccctgcata-aatatccattatccct 42541176  T
Q  633 taccaagtgag 643  Q
    |||||||||||    
T  42541175 taccaagtgag 42541165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 552 - 638
Target Start/End: Original strand, 37886219 - 37886305
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaa 638  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| ||| || ||||||||||| ||||||||| |||||||||    
T  37886219 tagagaaattcaccttaaaggtgaataagtggggtgtccagggttcgaaccctagctcctacatataa-atgcattatcccttaccaa 37886305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 43684377 - 43684279
Alignment:
Q  554 gagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtgagataagctca 652  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||| |||| || ||||||||| ||||||||| |||| ||||||||    
T  43684377 gagaaattcaccttaaaggtgaataagtggggtgttcggggttcgaacctcagcccctgcatacaa-atgcattatcccttaccaaatgagctaagctca 43684279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 648
Target Start/End: Complemental strand, 1962944 - 1962830
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||   | |||||||||| | ||||| |||| |||||||||||| | |    
T  1962944 gtcaagtagcctagcgactagagaa-ttcaccttaaagatgaataagtggggtgtccggagttcgaacctcgacccctgcatacaatatgcattatcctt 1962846  T
Q  633 taccaagtgagataag 648  Q
    ||||||||||| ||||    
T  1962845 taccaagtgagttaag 1962830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 34107613 - 34107495
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |  ||||| ||||| || ||||| || ||| | |||||||| |||    
T  34107613 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtg-tccgggtttgaaccctgacccctgcacatattgtgcattatccct 34107515  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  34107514 taccaaatgagctaagctca 34107495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 549 - 653
Target Start/End: Original strand, 25783205 - 25783309
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 647  Q
    |||||||||| |||||||| ||| ||||||||||||||||  |||||||||| |||  ||||| ||||| ||||||||||| ||| |||||||||| |||    
T  25783205 ggctagagaacttcaccttgaagatgaataagtggggtgtccagggttcgaaccctaacccctgcatat-atatgcattatccctcaccaagtgagctaa 25783303  T
Q  648 gctcac 653  Q
    ||||||    
T  25783304 gctcac 25783309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 33065233 - 33065352
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||  | |||||||||  | |||||||| | | | |||||||| |||    
T  33065233 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtagggtgttcggagttcgaaccccgacccctacacacattgtgcattatccct 33065332  T
Q  633 taccaagtgagataagctca 652  Q
    | |||| |||| ||||||||    
T  33065333 tgccaaatgagctaagctca 33065352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 37592198 - 37592265
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||    
T  37592198 gtcaagtagtctagcggctagagaaattcaccttaaaggtaaataagtggggtgtctggggttcgaac 37592265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 41541516 - 41541570
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  41541516 gtcaagtagcctagcggccagagaaattcaccttaaaagtgaataagtggggtgt 41541570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 534 - 603
Target Start/End: Complemental strand, 43027274 - 43027205
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 603  Q
    |||||| || |||| ||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  43027274 gtcaagtagtctagtggctagagaaattcaccttaaaggtgaataaatggggtgtctggggttcgaacct 43027205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 601
Target Start/End: Complemental strand, 29090534 - 29090467
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||| |||||   ||||||||||    
T  29090534 gtcaagtagcctagcggctggagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaac 29090467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 584
Target Start/End: Complemental strand, 41750065 - 41750015
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 584  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  41750065 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggg 41750015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 584
Target Start/End: Complemental strand, 42998754 - 42998704
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 584  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  42998754 gtcaagtagcctagcggctagagaaattcaccttaaaggtaaatatgtggg 42998704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 541 - 602
Target Start/End: Original strand, 19843346 - 19843407
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||||  |||||||||||||||||||||| |||||||||| |||||  ||||||||||||    
T  19843346 agcctagtagctagagaaattcaccttaaagatgaataagtgaggtgtctagggttcgaacc 19843407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 550 - 634
Target Start/End: Original strand, 33613597 - 33613682
Alignment:
Q  550 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccct-acatataatatgcattattcctta 634  Q
    |||||||||||||| ||||||||||||||||||||||||   ||||||||||   | ||||  ||||||||||||||||| |||||    
T  33613597 gctagagaaattcaacttaaaggtgaataagtggggtgtccggggttcgaactccgaccctcgcatataatatgcattatccctta 33613682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 653
Target Start/End: Complemental strand, 20435899 - 20435780
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| |||||||||  |||||||||||||||||||| |||||||||||| |||    |||||||| ||  | || | |||| |||||||| ||| |||    
T  20435899 gtcaagtagcctagcga-tagagaaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccgggccttgcataaaatatgcaatatccct 20435801  T
Q  633 taccaagtgagataagctcac 653  Q
    ||||||||||| |||||||||    
T  20435800 taccaagtgagctaagctcac 20435780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 653
Target Start/End: Complemental strand, 5207117 - 5206998
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 633  Q
    |||||| ||||||||| ||||| |||||||  ||||| || ||||||||||||||    ||||||||| |  ||||| ||||||| |||||||||   ||    
T  5207117 gtcaagtagcctagcgactagaaaaattcattttaaaagtaaataagtggggtgtccgaggttcgaacatgacccctgcatataaaatgcattatctatt 5207018  T
Q  634 accaagtgagataagctcac 653  Q
    ||||| |||| |||||||||    
T  5207017 accaaatgagttaagctcac 5206998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 653
Target Start/End: Complemental strand, 9564651 - 9564537
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac--cttgcccctacatataatatgcattattccttaccaa 638  Q
    |||||| || |||||||||||||| ||||||||||||||||| |||||  ||||| |||||  |   ||| |||||||| ||| ||||||  ||||||||    
T  9564651 agcctaacgactagagaaattcactttaaaggtgaataagtgaggtgtccagggtacgaaccacaaccccttacatatattatacattatctcttaccaa 9564552  T
Q  639 gtgagataagctcac 653  Q
    | ||| |||||||||    
T  9564551 gcgagctaagctcac 9564537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 584
Target Start/End: Original strand, 18424135 - 18424178
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggg 584  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  18424135 agcctagtggctagagaaattcaccttaaagatgaataagtggg 18424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 5207211 - 5207157
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| || |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  5207211 gtcaagtagtctagtggctaaagaaattcatcttaaaggtgaataagtggggtgt 5207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 31149078 - 31149196
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 633  Q
    |||||| |||| || || |||||||||||||||||||| | || |||||||||||   ||||||||||||   |||| || ||| | |||||||| ||||    
T  31149078 gtcaagtagccaagtggttagagaaattcaccttaaagattaaaaagtggggtgtctggggttcgaacctcaaccctgcacatattgtgcattatccctt 31149177  T
Q  634 accaagtgagataagctca 652  Q
    ||||| |||| || |||||    
T  31149178 accaaatgagctatgctca 31149196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 601
Target Start/End: Original strand, 3330195 - 3330244
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  3330195 tagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaac 3330244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 535 - 588
Target Start/End: Original strand, 5901808 - 5901861
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||| ||||||| ||||| ||||||||||||| ||| ||||||||||||||||    
T  5901808 tcaagtagcctagtggctaaagaaattcacctttaagatgaataagtggggtgt 5901861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 552 - 601
Target Start/End: Original strand, 42678318 - 42678367
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  42678318 tagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaac 42678367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 549 - 652
Target Start/End: Complemental strand, 17270016 - 17269912
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||||||||||||||| | | ||||||||| ||||||| || ||||||| ||   |||||||||| | | ||||||||||  |||||| |||| |||    
T  17270016 ggctagagaaattcacctttatgatgaataagttgggtgttcagcgttcgaatcccgacccctacataaattgtgcattattctctaccaaatgagctaa 17269917  T
Q  648 gctca 652  Q
    |||||    
T  17269916 gctca 17269912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 18949661 - 18949728
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| || |||| |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||    
T  18949661 gtcaagtagtctagtggctagagaaattcacattaaaa-tgaataagttgggtgttcagggttcgaacc 18949728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 572 - 643
Target Start/End: Original strand, 31594380 - 31594452
Alignment:
Q  572 gtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgag 643  Q
    |||||||| |||||||||  || ||||||| | | |||||||||||| |||||||||||||||||||| ||||    
T  31594380 gtgaataaatggggtgtttgggattcgaacttcgacccctacatatattatgcattattccttaccaaatgag 31594452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 535 - 652
Target Start/End: Complemental strand, 32084956 - 32084845
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 633  Q
    ||||| ||||||| ||||||| |||||||||||||       |||||| | ||||  |||||||||||  | ||||||||||||||||||||| | ||||    
T  32084956 tcaagtagcctagtggctagaaaaattcaccttaa-------taagtgagatgttcggggttcgaaccccggcccctacatataatatgcattgtccctt 32084864  T
Q  634 accaagtgagataagctca 652  Q
    ||||| |||| ||||||||    
T  32084863 accaaatgagctaagctca 32084845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 552 - 600
Target Start/End: Original strand, 35710165 - 35710213
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa 600  Q
    |||||||||||||||||||| |||||||||||| ||||  |||||||||    
T  35710165 tagagaaattcaccttaaagatgaataagtgggatgtttggggttcgaa 35710213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 653
Target Start/End: Complemental strand, 36755741 - 36755621
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||||| |  |||||| ||||||||||||||||  ||| ||||||   |||||| ||||  | |||||| |||||  || |||||| |||    
T  36755741 gtcaagtagcctagcgaccggagaaagtcaccttaaaggtgaaatagttgggtgtccggggttcaaaccccgacccctatatatataatccattatccct 36755642  T
Q  633 taccaagtgagataagctcac 653  Q
    ||||||||||| |||||||||    
T  36755641 taccaagtgagttaagctcac 36755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 541 - 580
Target Start/End: Original strand, 10745487 - 10745526
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataag 580  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  10745487 agcctagcggttagataaattcaccttaaaggtgaataag 10745526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 17543066 - 17543120
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| ||||||| || |||||||| |||| |||||| ||||||||||||||||    
T  17543066 gtcaagtagcctagtggttagagaaagtcacattaaagatgaataagtggggtgt 17543120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 576 - 638
Target Start/End: Complemental strand, 24374277 - 24374216
Alignment:
Q  576 ataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaa 638  Q
    |||||||||||||| ||| ||||||||  | |||||||||||||||||| || ||||||||||    
T  24374277 ataagtggggtgttcaggattcgaaccacgaccctacatataatatgcaata-tccttaccaa 24374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 658 - 688
Target Start/End: Complemental strand, 32009968 - 32009938
Alignment:
Q  658 actccatttattttgtcaaatggagaggatc 688  Q
    |||||||||||||||||||||||||||||||    
T  32009968 actccatttattttgtcaaatggagaggatc 32009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 658 - 691
Target Start/End: Complemental strand, 30857672 - 30857639
Alignment:
Q  658 actccatttattttgtcaaatggagaggatccta 691  Q
    |||||||||||||||| |||||||||||||||||    
T  30857672 actccatttattttgtgaaatggagaggatccta 30857639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 6e-40; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 759 - 942
Target Start/End: Original strand, 41992255 - 41992438
Alignment:
Q  759 gagaaagtggctgaagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagg 858  Q
    ||||||| || |||||||||||| ||| |||| ||||||| ||||||| ||  || |||||||||||| ||||| ||||||| |||||||||||||||||    
T  41992255 gagaaagcggatgaagcgggcgcaatgcgggtcaaagcgggcgcttttgacaaccatgtgtaaaatactagatttcccttcatttaaaaccgttttaagg 41992354  T
Q  859 gtcattttttgtaattttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatc 942  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||| || ||||||||||||| |  ||||  |||||||||||||    
T  41992355 gtca-tttttgtaattttcaaaaccctaactattactcttctccaccataaccaaatacacagccacaaactcaacttcttcatc 41992438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 772 - 946
Target Start/End: Complemental strand, 37369813 - 37369639
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||||||||| |||| ||||||| ||||||| ||  ||||||||||||||| ||||| ||||| | ||||||| ||||||| ||||| ||||||||    
T  37369813 aagcgggcgcgatgcgggtcaaagcgggcgcttttgacaaccctgtgtaaaatactagatttcccttaatttaaaactgttttaacggtca-tttttgta 37369715  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  37369714 attttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 37369639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 534 - 654
Target Start/End: Original strand, 15680877 - 15680998
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||    ||||||||  ||| || |  |||||| ||||||||||||||    
T  15680877 gtcaagtagcctagcggttagagaaattcaccttaaaggtgaataagtggggtgtccgaggttcgaattttgaccaccgcatatattatgcattattcct 15680976  T
Q  633 taccaagtgagataagctcaca 654  Q
    ||||||||||| |||| |||||    
T  15680977 taccaagtgagctaaggtcaca 15680998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 546 - 654
Target Start/End: Complemental strand, 34729578 - 34729468
Alignment:
Q  546 agcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgaga 644  Q
    ||||| |||||||||||||||||||||||||||||||||||| |  |||||||||||  | ||||| ||||||||||||||||| |||||||||||||||    
T  34729578 agcggttagagaaattcaccttaaaggtgaataagtggggtg-tccgggttcgaaccccgacccctgcatataatatgcattatcccttaccaagtgaga 34729480  T
Q  645 --taagctcaca 654  Q
      ||||||||||    
T  34729479 gctaagctcaca 34729468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 31250266 - 31250147
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  31250266 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 31250167  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  31250166 taccaaatgagctaagctca 31250147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 534 - 654
Target Start/End: Complemental strand, 20191560 - 20191440
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| || |||| ||| ||||||||| ||||||||||||||||||||| ||||   |||||||||||  | ||||| ||||||| ||||||||| |||    
T  20191560 gtcaagtagtctagtggccagagaaatttaccttaaaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatataa-atgcattatccct 20191462  T
Q  633 taccaagtgagataagctcaca 654  Q
    ||||||||||| ||||||||||    
T  20191461 taccaagtgagttaagctcaca 20191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 43227986 - 43227866
Alignment:
Q  534 gtcaagcagcct-agcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcc 631  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| ||    
T  43227986 gtcaagcagccttagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccc 43227887  T
Q  632 ttaccaagtgagataagctca 652  Q
    ||||||| |||| ||||||||    
T  43227886 ttaccaaatgagctaagctca 43227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 549 - 652
Target Start/End: Original strand, 38503248 - 38503352
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| ||||||||| |||| |||    
T  38503248 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 38503347  T
Q  648 gctca 652  Q
    |||||    
T  38503348 gctca 38503352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 536 - 579
Target Start/End: Original strand, 12256474 - 12256517
Alignment:
Q  536 caagcagcctagcggctagagaaattcaccttaaaggtgaataa 579  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12256474 caagtagcctagcggctagagaaattcaccttaaaggtgaataa 12256517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 42209035 - 42208917
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 633  Q
    |||||| ||||||| | ||||||||||||||||||||| |||||||||| |||||   | |||||||||| | |||| || ||| | || ||||| ||||    
T  42209035 gtcaagtagcctagtgactagagaaattcaccttaaagatgaataagtgaggtgtccggagttcgaacctcggccctgcacatattgtgtattatccctt 42208936  T
Q  634 accaagtgagataagctca 652  Q
    || || |||| ||||||||    
T  42208935 actaaatgagctaagctca 42208917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 4395842 - 4395894
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    ||||||||||||||||||||||| ||||||| |||||||| | ||||||||||    
T  4395842 ggctagagaaattcaccttaaagatgaataaatggggtgtcaggggttcgaac 4395894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 17077480 - 17077361
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||| ||||||||||| ||| ||||||||||||||||   ||||||||| ||   ||||| || | | | |||||||| |||    
T  17077480 gtcaagtagcctagtggctagataaattcacctttaagatgaataagtggggtgtccggggttcgaatcccgacccctgcacaaattgtgcattatccct 17077381  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  17077380 taccaaatgagctaagctca 17077361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 5039799 - 5039745
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| || |||| ||||||||||||| ||||||||| ||||||||||||||||    
T  5039799 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgt 5039745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 580
Target Start/End: Original strand, 33545363 - 33545409
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataag 580  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  33545363 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataag 33545409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 534 - 650
Target Start/End: Complemental strand, 5263288 - 5263171
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||||| || |||||   |||||||||| |   |||||||| ||| | |||||||| | |    
T  5263288 gtcaagtagcctagtggctagagaaattcagcttaaagatgaataaatgtggtgtctcgggttcgaacatcaccccctacacatattgtgcattatccat 5263189  T
Q  633 taccaagtgagataagct 650  Q
    |||||| |||| ||||||    
T  5263188 taccaaatgagctaagct 5263171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 558 - 603
Target Start/End: Original strand, 35168632 - 35168677
Alignment:
Q  558 aattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 603  Q
    |||||||||||||||||||||||||||||||   ||||||||||||    
T  35168632 aattcaccttaaaggtgaataagtggggtgtccggggttcgaacct 35168677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 549 - 652
Target Start/End: Original strand, 15470612 - 15470716
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||||||||||||||||||| ||||||| ||||||||   ||||||||| ||  |||| | || ||| | |||||||| ||||||||| |||  |||    
T  15470612 ggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaatctcagcccttgcacatattgtgcattatcccttaccaaatgaattaa 15470711  T
Q  648 gctca 652  Q
    |||||    
T  15470712 gctca 15470716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 535 - 602
Target Start/End: Complemental strand, 1572228 - 1572161
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||| || |||| ||||||||||||||||||| ||| ||||||||||||| ||   |||||||||||    
T  1572228 tcaagtagtctagtggctagagaaattcacctttaagatgaataagtggggagtccggggttcgaacc 1572161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 543 - 652
Target Start/End: Original strand, 1984174 - 1984284
Alignment:
Q  543 cctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtg 641  Q
    ||||| |||||||  |||||||||| ||| |||||||||||| |||  |||||||||| || | |||||||  | | | |||||||| ||||||||| ||    
T  1984174 cctagtggctagaagaattcacctttaagatgaataagtgggatgtctagggttcgaaactcgacccctacgaaaattgtgcattatcccttaccaaatg 1984273  T
Q  642 agataagctca 652  Q
    || ||||||||    
T  1984274 agttaagctca 1984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 584
Target Start/End: Complemental strand, 5048751 - 5048701
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 584  Q
    ||||||||| |||| ||||| ||||||||||||||||| | ||||||||||    
T  5048751 gtcaagcagtctagtggctaaagaaattcaccttaaagataaataagtggg 5048701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 610
Target Start/End: Complemental strand, 5156993 - 5156940
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaaccttgcccct 610  Q
    ||||||||||| ||||||||||||| ||||||  ||||||||||||||| ||||    
T  5156993 aattcaccttataaggtgaataagtagggtgtctagggttcgaaccttgaccct 5156940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 557 - 620
Target Start/End: Complemental strand, 10508677 - 10508612
Alignment:
Q  557 aaattcacctta-aaggtgaataagtggggtgttaagggttcgaacc-ttgcccctacatataata 620  Q
    |||||||||||| ||||||||||||||||||||  ||| |||||||| | |||||| |||||||||    
T  10508677 aaattcaccttataaggtgaataagtggggtgtccaggtttcgaaccgtggcccctgcatataata 10508612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 557 - 620
Target Start/End: Original strand, 15978675 - 15978740
Alignment:
Q  557 aaattcacctta-aaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 620  Q
    |||||||||||| |||||||||||||||||||||  |||||| |||||   |||||||||||||||    
T  15978675 aaattcaccttataaggtgaataagtggggtgtttggggttcaaacctcatcccctacatataata 15978740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Complemental strand, 18478099 - 18478054
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  18478099 aattcaccttataaggtgaataagtggggtgtccagggttcgaacc 18478054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 19059003 - 19059048
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  19059003 aattcaccttataaggtgaataagtggggtgtccagggttcgaacc 19059048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Complemental strand, 20762377 - 20762332
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  20762377 aattcaccttataaggtgaataagtggggtgtccagggttcgaacc 20762332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 32158413 - 32158458
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||    
T  32158413 aattcaccttataaggtgaataagtggggtgttcggggttcgaacc 32158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 555 - 588
Target Start/End: Complemental strand, 38436017 - 38435984
Alignment:
Q  555 agaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||||||||||||||||||||||| ||||||    
T  38436017 agaaattcaccttaaaggtgaataagtagggtgt 38435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 2e-39; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 772 - 946
Target Start/End: Original strand, 39759338 - 39759512
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||||| ||| |||| |||| || ||||||| ||  |||||||| |||||| ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  39759338 aagcgggcgcaatgcgggtcaaagtgggcgcttttgacaaccctgtgtgaaatactagatttcccttcatttaaaaccgttttaagggtca-tttttgta 39759436  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  39759437 attttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 39759512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 772 - 942
Target Start/End: Complemental strand, 43823648 - 43823478
Alignment:
Q  772 aagcgggcgcgatgtgggttaaagcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgta 871  Q
    |||||||||||||| |||| ||||||| ||||||| ||  ||||||||||| ||| ||||| ||||||| ||||| ||||||||||||||  ||||||||    
T  43823648 aagcgggcgcgatgcgggtcaaagcgggcgcttttgacaaccctgtgtaaattactagatttcccttcatttaaacccgttttaagggtc-gtttttgta 43823550  T
Q  872 attttcaaaacgctaacta-tactcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatc 942  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||| |  ||||  |||||||||||||    
T  43823549 attttcaaaaccctaactattactcttctccaccagaaccaaatacacagccacaaactcaacttcttcatc 43823478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 534 - 654
Target Start/End: Complemental strand, 38415002 - 38414882
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||| |||| || ||||| ||||||||||||||||| |||    
T  38415002 gtcaagtagcctagcggccagagaaattcaccttaaaggtgaataagtggggtgttcagagttcaaaccctgacccctgcatataatatgcattatccct 38414903  T
Q  633 taccaagtgagataagctcaca 654  Q
    ||||||||| | ||||||||||    
T  38414902 taccaagtg-gctaagctcaca 38414882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 541 - 652
Target Start/End: Complemental strand, 45431739 - 45431627
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaag 639  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||||| || ||||| |||| |||| ||||||| ||||||||||    
T  45431739 agcctagcggctagggaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccctgacccctgcataaaatacgcattatcccttaccaag 45431640  T
Q  640 tgagataagctca 652  Q
    |||| ||||||||    
T  45431639 tgagctaagctca 45431627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 837 - 950
Target Start/End: Complemental strand, 53286516 - 53286405
Alignment:
Q  837 ttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaactat-actcttctccatcagaaccaaatacacaactgcaaaaacaactt 935  Q
    |||||||||||||||||| |||  |  ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||  ||||||    
T  53286516 ttcacttaaaaccgtttttagg--ccatttttgtaattttcaaaac-ctaactattactcttctccatcagaaccaaatacacagctgcaaacgcaactt 53286420  T
Q  936 cttcatcgtacaaac 950  Q
    |||||||||||||||    
T  53286419 cttcatcgtacaaac 53286405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 534 - 653
Target Start/End: Complemental strand, 27394626 - 27394507
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||| || ||  |||||| ||||||| ||||||||| |||    
T  27394626 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatataa-atgcattatccct 27394528  T
Q  633 taccaagtgagataagctcac 653  Q
    ||||||||||| | |||||||    
T  27394527 taccaagtgagcttagctcac 27394507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 534 - 653
Target Start/End: Complemental strand, 166907 - 166787
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||   ||||||||| ||  |||||| |||| | |||||||||| |||    
T  166907 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtgaggtgtctggggttcgaaccccggcccctgcataaattatgcattatccct 166808  T
Q  633 taccaagtgagataagctcac 653  Q
    ||||||||||| |||||||||    
T  166807 taccaagtgagctaagctcac 166787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 534 - 648
Target Start/End: Original strand, 1102672 - 1102787
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |   ||||| |||| | |||||||||| |||    
T  1102672 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccatggttcgaactccgtcccctgcataaattatgcattatccct 1102771  T
Q  633 taccaagtgagataag 648  Q
    ||||| ||||| ||||    
T  1102772 taccaggtgagctaag 1102787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 50676843 - 50676962
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| || |||| || ||||||||||||||||||||||||||||||||||||||  |||||||||||    ||||||||||||||||| ||| | |||    
T  50676843 gtcaagtagtctagtggttagagaaattcaccttaaaggtgaataagtggggtgttcggggttcgaaccccaacccctacatataatatgtattgtccct 50676942  T
Q  633 taccaagtgagataagctca 652  Q
    ||||||||||| ||| ||||    
T  50676943 taccaagtgagttaaactca 50676962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 545 - 652
Target Start/End: Complemental strand, 49429568 - 49429461
Alignment:
Q  545 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgag 643  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||| | |||| |||| || ||||||||| ||||||||| ||||    
T  49429568 tagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccctggtccctgcatacaa-atgcattatcccttaccaaatgag 49429470  T
Q  644 ataagctca 652  Q
     ||||||||    
T  49429469 ttaagctca 49429461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 50381833 - 50381714
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||   || ||||||||  | ||||| |||||| | |||||||| |||    
T  50381833 gtcaagcagcctaatggctagagaaattcaccttaaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatatattgtgcattatccct 50381734  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  50381733 taccaaatgagttaagctca 50381714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 541 - 653
Target Start/End: Original strand, 37756396 - 37756511
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaag 639  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||||||  ||||||||| ||  |||||| |||| | |||||||||| ||||| ||||    
T  37756396 agcctagcggcgagagaaactcacgttaaaggtgaataagtggggtgtttggggttcgaaccccagcccctgcataaattatgcattatcccttatcaag 37756495  T
Q  640 tgag--ataagctcac 653  Q
    ||||  ||||||||||    
T  37756496 tgagctataagctcac 37756511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 33528181 - 33528300
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || | | | |||||||| |||    
T  33528181 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatccct 33528280  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  33528281 taccaaatgagctaagctca 33528300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 640
Target Start/End: Complemental strand, 43897721 - 43897614
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 632  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||||||||||||    ||||||||| |    ||||||||||||||| |||| |||||    
T  43897721 gtcaagtagcctaacggttagagaaattcaccttaaaggtgaataagtggggtgtctgaggttcgaacatcaatccctacatataatatacatttttcct 43897622  T
Q  633 taccaagt 640  Q
    ||||||||    
T  43897621 taccaagt 43897614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 54457272 - 54457153
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||   |||||  || ||  || |||||||| | ||||||||||  ||    
T  54457272 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataaatggggtgtccggggtttaaaccccagctcctacataaattatgcattatctct 54457173  T
Q  633 taccaagtgagataagctca 652  Q
    || |||||||| ||||||||    
T  54457172 tatcaagtgagttaagctca 54457153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 8930953 - 8931007
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  8930953 gtcaagtagcctagcggctagagaaattcactttaaaggtgaataagtggggtgt 8931007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 534 - 643
Target Start/End: Original strand, 22602179 - 22602289
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||| | |||   || ||||||||| | |||||||| ||| | ||||||||||||    
T  22602179 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgcgatgtctgggattcgaacctcgtcccctacacatattgtgcattattcct 22602278  T
Q  633 taccaagtgag 643  Q
    |||||| ||||    
T  22602279 taccaaatgag 22602289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 534 - 650
Target Start/End: Complemental strand, 47864755 - 47864638
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||   ||||| || ||| | |||||||| |||    
T  47864755 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgcacatattgtgcattatccct 47864656  T
Q  633 taccaagtgagataagct 650  Q
    |||||| |||| ||||||    
T  47864655 taccaaatgagctaagct 47864638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 550 - 652
Target Start/End: Complemental strand, 11483716 - 11483613
Alignment:
Q  550 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataag 648  Q
    |||||||||||||||||||||| ||||||||||||||||   | ||||||| ||| |||||| || ||| | |||||||| ||||||||| |||| ||||    
T  11483716 gctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaaccctggcccctgcacatattttgcattatcccttaccaaatgagctaag 11483617  T
Q  649 ctca 652  Q
    ||||    
T  11483616 ctca 11483613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 50271848 - 50271730
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc-ttgcccctacatataatatgcattattcct 632  Q
    |||||| || ||||||| ||||||||||||||||||||||||||||||||| |||   |||||||||||   |||||| |||| || |||||||||  ||    
T  50271848 gtcaagtagtctagcggttagagaaattcaccttaaaggtgaataagtgggatgtacggggttcgaaccacggcccctgcatacaa-atgcattatctct 50271750  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  50271749 taccaaatgagctaagctca 50271730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 29645803 - 29645871
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| || |||| ||||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  29645803 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacc 29645871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 46798701 - 46798582
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| || |||||||||  ||||||||| ||||||||||||||||  |||||||||| ||  |||||| || ||| | |||||||| |||    
T  46798701 gtcaagtagcctagtggttagagaaatctaccttaaagatgaataagtggggtgtccagggttcgaatcccggcccctgcacatattgtgcattatccct 46798602  T
Q  633 taccaagtgagataagctca 652  Q
     ||||| |||| ||||||||    
T  46798601 caccaaatgagttaagctca 46798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 545 - 643
Target Start/End: Complemental strand, 48717521 - 48717422
Alignment:
Q  545 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgag 643  Q
    |||||||| |||||||||||||||||| |||| ||||||||||||  ||||||||| || | ||||| |||| |  ||| ||||||||||||||| ||||    
T  48717521 tagcggctggagaaattcaccttaaagatgaaaaagtggggtgtttggggttcgaacccctacccctgcatacataatgtattattccttaccaaatgag 48717422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 534 - 588
Target Start/End: Complemental strand, 38668247 - 38668193
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| || |||| ||||||||||||||||||||||| ||||||||||||||||    
T  38668247 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgt 38668193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 27471623 - 27471555
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| || |||| ||||||||||||| ||||||||| ||||||||||||||||   |||||||||||    
T  27471623 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaacc 27471555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 549 - 652
Target Start/End: Complemental strand, 32421452 - 32421348
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 647  Q
    ||||||| ||||||| ||||||| ||||||||||||| |||   ||||||||||  | ||||| |||||| |||||||||| ||||||||  |||| |||    
T  32421452 ggctagaaaaattcatcttaaagatgaataagtggggagttcgaggttcgaaccccgacccctgcatatattatgcattatcccttaccagatgagctaa 32421353  T
Q  648 gctca 652  Q
    |||||    
T  32421352 gctca 32421348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 534 - 602
Target Start/End: Complemental strand, 39739393 - 39739325
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| || |||| ||||||||||||||||||||||| |||||||||| |||||   |||||||||||    
T  39739393 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaacc 39739325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 27817044 - 27817162
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||||| ||||||| |  |||||||||| |  |||||| || | | | |||||||| |||    
T  27817044 gtcaagtagcctagtggctagagaaattcaacttaaagatgaataaatggggtg-tccgggttcgaactccggcccctgcacaaattgtgcattatccct 27817142  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  27817143 taccaaatgaggtaagctca 27817162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 643
Target Start/End: Original strand, 28054713 - 28054815
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaag 639  Q
    |||||||||||||||||| |||||||||| | | ||||||||||||||   |||||||||| ||  ||||| |||| | |||||| ||| ||||||||||    
T  28054713 agcctagcggctagagaa-ttcaccttaaggataaataagtggggtgtctggggttcgaactctgacccctgcataaattatgcaatatcccttaccaag 28054811  T
Q  640 tgag 643  Q
    ||||    
T  28054812 tgag 28054815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 643
Target Start/End: Original strand, 28065138 - 28065240
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaag 639  Q
    |||||||||||||||||| |||||||||| | | ||||||||||||||   |||||||||| ||  ||||| |||| | |||||| ||| ||||||||||    
T  28065138 agcctagcggctagagaa-ttcaccttaaggataaataagtggggtgtctggggttcgaactctgacccctgcataaattatgcaatatcccttaccaag 28065236  T
Q  640 tgag 643  Q
    ||||    
T  28065237 tgag 28065240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 555 - 653
Target Start/End: Complemental strand, 31419681 - 31419582
Alignment:
Q  555 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataagctcac 653  Q
    |||||||||| || |||||||||||||||||||||  ||||||||| ||  ||||||||| ||| | ||| || | ||||||||| |||| |||||||||    
T  31419681 agaaattcacttttaaggtgaataagtggggtgtttggggttcgaaccccagcccctacacatattgtgcgttgtcccttaccaaatgagttaagctcac 31419582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 552 - 602
Target Start/End: Complemental strand, 29226427 - 29226377
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  29226427 tagagaaattcaccttaaagatgaataagtggggtgtacggggttcgaacc 29226377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 584
Target Start/End: Original strand, 31435477 - 31435527
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 584  Q
    |||||| || |||| ||||||||||||||||||||||| ||||||||||||    
T  31435477 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggg 31435527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 545 - 579
Target Start/End: Complemental strand, 41768481 - 41768447
Alignment:
Q  545 tagcggctagagaaattcaccttaaaggtgaataa 579  Q
    |||||||||||||||||||||||||||||||||||    
T  41768481 tagcggctagagaaattcaccttaaaggtgaataa 41768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 44062018 - 44062072
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| || |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  44062018 gtcaagtagtctagtggctagagacattcaccttaaagatgaataagtggggtgt 44062072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 535 - 581
Target Start/End: Original strand, 50332935 - 50332981
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagt 581  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||    
T  50332935 tcaagtagtctagcggctagagaaattcatcttaaaggtgaataagt 50332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 54964517 - 54964571
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| |||||||||||| ||||||| |||||||||||||||  ||||||||||    
T  54964517 gtcaagtagcctagcggctggagaaatacaccttaaaggtgaaatagtggggtgt 54964571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 25165563 - 25165440
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcacctt---aaaggtgaataagt-ggggtgttaagggttcgaa-ccttgcccctacatataatatgcattat 628  Q
    |||||||||||||| |||||||||||||||||||   |||| ||||||||| |||||||   ||||||||| ||  | |||| || ||| | ||||||||    
T  25165563 gtcaagcagcctagtggctagagaaattcaccttaaaaaagatgaataagtgggggtgtccggggttcgaaccccggtccctgcacatattgtgcattat 25165464  T
Q  629 tccttaccaagtgagataagctca 652  Q
     ||||||||| |||| ||||||||    
T  25165463 cccttaccaaatgagctaagctca 25165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 544 - 588
Target Start/End: Original strand, 985905 - 985949
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||    
T  985905 ctagtggctagagaaattcacctttaagatgaataagtggggtgt 985949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 9320935 - 9321003
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||| || |||||||||||| ||| ||| |||||||||||||||||  || ||||||||    
T  9320935 gtcaagtagcctagtggttagagaaattcatctttaagatgaataagtggggtgttcgggtttcgaacc 9321003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 544 - 588
Target Start/End: Complemental strand, 9738465 - 9738421
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||    
T  9738465 ctagcggctaaagaaattcaccttaaagatgaataagtggagtgt 9738421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 582
Target Start/End: Complemental strand, 24651231 - 24651195
Alignment:
Q  546 agcggctagagaaattcaccttaaaggtgaataagtg 582  Q
    ||||| |||||||||||||||||||||||||||||||    
T  24651231 agcggttagagaaattcaccttaaaggtgaataagtg 24651195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 558 - 620
Target Start/End: Complemental strand, 49639124 - 49639060
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataata 620  Q
    ||||||||||| |||||||||||||||||||||  ||||||||| ||  ||||||||||||||||    
T  49639124 aattcaccttacaaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataata 49639060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 554 - 652
Target Start/End: Complemental strand, 34225296 - 34225195
Alignment:
Q  554 gagaaattcaccttaaaggtgaataagtggggt---gttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgagataagct 650  Q
    ||||||||||||||||||||||||||||| |||   ||   ||||| ||| || |||||| || ||| | |||||||| ||||||||| |||| ||||||    
T  34225296 gagaaattcaccttaaaggtgaataagtgaggtgtcgtccggggtttgaatctagcccctgcacatattgtgcattatcccttaccaaatgagctaagct 34225197  T
Q  651 ca 652  Q
    ||    
T  34225196 ca 34225195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 549 - 653
Target Start/End: Complemental strand, 7239906 - 7239805
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgagataag 648  Q
    |||||||||||| ||||||||||  ||||||||||||||||   ||||||||||   |||||||| ||| | || | ||| ||||||||| |||  ||||    
T  7239906 ggctagagaaatccaccttaaagacgaataagtggggtgttcgaggttcgaacc---cccctacacatattgtgtaatatcccttaccaaatgaactaag 7239810  T
Q  649 ctcac 653  Q
    |||||    
T  7239809 ctcac 7239805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 658 - 688
Target Start/End: Original strand, 24647920 - 24647950
Alignment:
Q  658 actccatttattttgtcaaatggagaggatc 688  Q
    |||||||||||||||||||||||||||||||    
T  24647920 actccatttattttgtcaaatggagaggatc 24647950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 40415538 - 40415592
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| || ||||| | ||||||||||||||||||| ||||||||||| |||||    
T  40415538 gtcaagtagtctagctgttagagaaattcaccttaaaagtgaataagtgaggtgt 40415592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 55426229 - 55426114
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| |||||||||||||||||||||||    || ||||||||||   ||||||||||||  |||| | || ||| | |||||||| | |    
T  55426229 gtcaagtagcctagtggctagagaaattcaccttaaag----atgagtggggtgtccggggttcgaacctcggcccatgcacatattgtgcattatcctt 55426134  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  55426133 taccaaatgagctaagctca 55426114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 569 - 602
Target Start/End: Original strand, 21249001 - 21249034
Alignment:
Q  569 aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||||||||||||| ||||||||||||    
T  21249001 aaggtgaataagtggggtgttcagggttcgaacc 21249034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 32508793 - 32508838
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||    
T  32508793 aattcaccttataaggtgaataagtggggtgttcggggttcgaacc 32508838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 1e-37; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 795 - 946
Target Start/End: Complemental strand, 3288637 - 3288486
Alignment:
Q  795 gcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaacta-tac 893  Q
    |||| ||||||| ||  ||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |||    
T  3288637 gcgggcgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccgttttaagggtcat-ttttgtaattttcaaaaccctaactattac 3288539  T
Q  894 tcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  3288538 tcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 3288486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 837 - 950
Target Start/End: Original strand, 11843247 - 11843358
Alignment:
Q  837 ttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaactat-actcttctccatcagaaccaaatacacaactgcaaaaacaactt 935  Q
    |||||||||||||||||| |||  |  ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||| ||||||| |||||||    
T  11843247 ttcacttaaaaccgtttttagg--ccatttttgtaatttttaaaac-ctaactattactcttctccatcagaaccaaatacacagctgcaaacacaactt 11843343  T
Q  936 cttcatcgtacaaac 950  Q
    |||||||||||||||    
T  11843344 cttcatcgtacaaac 11843358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 535 - 648
Target Start/End: Complemental strand, 7164812 - 7164699
Alignment:
Q  535 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcctt 633  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| |  |||||||||||||| ||||||||| ||||    
T  7164812 tcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtggtcggggttcgaactccggcccctacatataa-atgcattatccctt 7164714  T
Q  634 accaagtgagataag 648  Q
    | ||| |||| ||||    
T  7164713 atcaaatgagctaag 7164699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 534 - 649
Target Start/End: Original strand, 5641666 - 5641781
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 633  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||  |  ||| |||| | |||||||||| | ||    
T  5641666 gtcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggagttcgaaccccggtcctgcataaattatgcattatccatt 5641765  T
Q  634 accaagtgagataagc 649  Q
    |||||||||| |||||    
T  5641766 accaagtgagttaagc 5641781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 6228236 - 6228355
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  6228236 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 6228335  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  6228336 taccaaatgagctaagctca 6228355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 17217077 - 17216958
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   | |||||||| |   |||||||| ||| |||||||||| |||    
T  17217077 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaactccgacccctacacatattatgcattatccct 17216978  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  17216977 taccaaatgagctaagctca 17216958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 534 - 652
Target Start/End: Original strand, 20415538 - 20415657
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||| |||||| || ||| | |||||||| |||    
T  20415538 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccctggcccctgcacatattgtgcattatccct 20415637  T
Q  633 taccaagtgagataagctca 652  Q
    ||| || |||| ||| ||||    
T  20415638 tacaaaatgagctaaactca 20415657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 534 - 638
Target Start/End: Original strand, 35065466 - 35065570
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 633  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||||| | ||||    ||||||||||  ||||||||||| | |||||||||| ||||    
T  35065466 gtcaagcagcttagcggctagagaaattcactttaaatgtgaataagtagagtgtccgtggttcgaacccggcccctacataaattatgcattatccctt 35065565  T
Q  634 accaa 638  Q
    |||||    
T  35065566 accaa 35065570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 547 - 652
Target Start/End: Original strand, 8330480 - 8330586
Alignment:
Q  547 gcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaagtgagat 645  Q
    ||||||||||||||||||||||||||||||||||||| |||||  || ||||||| |  | |||||||||||||||| ||||| | ||| |||| ||| |    
T  8330480 gcggctagagaaattcaccttaaaggtgaataagtggagtgttttggcttcgaactccggtccctacatataatatgtattatcctttatcaagagagtt 8330579  T
Q  646 aagctca 652  Q
    |||||||    
T  8330580 aagctca 8330586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 5757847 - 5757915
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||  |||||||||||    
T  5757847 gtcaagtagcctggcggctagagaaattcaccttaaatgtgaataagtgaggtgttcggggttcgaacc 5757915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 18903343 - 18903411
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  18903343 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacc 18903411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 534 - 603
Target Start/End: Original strand, 31703704 - 31703773
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 603  Q
    |||||| | ||||||||||| ||||||||| |||||| ||||||||||| ||||||| ||||||||||||    
T  31703704 gtcaagtaacctagcggctaaagaaattcatcttaaaagtgaataagtgaggtgttaggggttcgaacct 31703773  T

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Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 547 - 638
Target Start/End: Complemental strand, 9455945 - 9455854
Alignment:
Q  547 gcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaa 638  Q
    ||||||||| ||||||| |||||||||||||||||||||||||  |||||||||| |   |||||||||| || ||||||||| |||||||||    
T  9455945 gcggctagaaaaattcaacttaaaggtgaataagtggggtgtttggggttcgaactccgacccctacatacaa-atgcattatcccttaccaa 9455854  T

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Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 541 - 655
Target Start/End: Original strand, 3338290 - 3338404
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaag 639  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||   |||||||||| |  |||||| || | ||||||||||||  |||||||||    
T  3338290 agcctagcgactatagaaattcaccttaaatgtgaataagtagggtgtctggggttcgaacttcagcccctgca-aaaatatgcattatctcttaccaag 3338388  T
Q  640 tgagataagctcacat 655  Q
    |||| ||| |||||||    
T  3338389 tgagctaaactcacat 3338404  T

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Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 541 - 638
Target Start/End: Original strand, 7954905 - 7955003
Alignment:
Q  541 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaa 638  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||  ||||||| |||| | ||||| || ||| | |||||||| |||||||||    
T  7954905 agcctagtggctagagaaattcatcttaaagatgaataagtgggatgttcggggttcgcacctcgccccctgcacatattgtgcattatcccttaccaa 7955003  T

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Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 551 - 638
Target Start/End: Complemental strand, 32470787 - 32470698
Alignment:
Q  551 ctagagaaattcaccttaaaggtgaataagt-ggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaa 638  Q
    ||||||||||||||||||||||||||||||| |||||||    ||||| |||||  |||||| |||||| |||||||||||| |||||||    
T  32470787 ctagagaaattcaccttaaaggtgaataagtaggggtgtctgaggttcaaacctcagcccctgcatatattatgcattattctttaccaa 32470698  T

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Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 549 - 585
Target Start/End: Original strand, 1183943 - 1183979
Alignment:
Q  549 ggctagagaaattcaccttaaaggtgaataagtgggg 585  Q
    |||||||||||||||||||||||||||||||||||||    
T  1183943 ggctagagaaattcaccttaaaggtgaataagtgggg 1183979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 550 - 602
Target Start/End: Complemental strand, 11611472 - 11611420
Alignment:
Q  550 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||||||| |||||| ||||||||||||||||  ||||||||||||    
T  11611472 gctagagaaattcacattaaagatgaataagtggggtgtccagggttcgaacc 11611420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 534 - 626
Target Start/End: Complemental strand, 9763553 - 9763461
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcatt 626  Q
    |||||| ||| ||| |||||||||||||||||||||| ||||||||||||||| ||  ||||| ||| ||  |||| | |||||||||||||||    
T  9763553 gtcaagtagcatagtggctagagaaattcaccttaaa-gtgaataagtggggttttcggggttggaaccccggcccatgcatataatatgcatt 9763461  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 534 - 638
Target Start/End: Original strand, 29321952 - 29322057
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| || |||| ||||||||||||||||||||||| | |||||||||| |||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  29321952 gtcaagtagtctagtggctagagaaattcaccttaaagataaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatccct 29322051  T
Q  633 taccaa 638  Q
    ||||||    
T  29322052 taccaa 29322057  T

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Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 602
Target Start/End: Original strand, 4854282 - 4854350
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 602  Q
    |||||| || |||| || |||||||||| ||||||||| ||||||||||||||||   |||||||||||    
T  4854282 gtcaagtaggctagtggttagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaacc 4854350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 534 - 589
Target Start/End: Complemental strand, 6371637 - 6371582
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtt 589  Q
    ||||||||| | | ||| |||||||||| ||||||||||| |||||||||||||||    
T  6371637 gtcaagcagtcaatcggttagagaaatttaccttaaaggttaataagtggggtgtt 6371582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 550 - 588
Target Start/End: Original strand, 1194696 - 1194733
Alignment:
Q  550 gctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1194696 gctagagaaattcaccttaaa-gtgaataagtggggtgt 1194733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 555 - 653
Target Start/End: Original strand, 20568252 - 20568352
Alignment:
Q  555 agaaattcaccttaa--aggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctc 651  Q
    ||||||||||||| |  ||||||||||||||||||||  |||||||||||  | ||||| |||||| |||||| |  |||||||||| |||| |||||||    
T  20568252 agaaattcacctttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatatattatgcaat-gtccttaccaactgagctaagctc 20568350  T
Q  652 ac 653  Q
    ||    
T  20568351 ac 20568352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 534 - 588
Target Start/End: Original strand, 34884133 - 34884187
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 588  Q
    |||||| || |||||||||||| ||||| ||||||| |||||||| |||||||||    
T  34884133 gtcaagtagtctagcggctagataaatttaccttaatggtgaatatgtggggtgt 34884187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 534 - 579
Target Start/End: Original strand, 3200059 - 3200104
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataa 579  Q
    |||||| ||||||  ||||||||||||||||||||||| |||||||    
T  3200059 gtcaagtagcctattggctagagaaattcaccttaaagatgaataa 3200104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 3974542 - 3974509
Alignment:
Q  552 tagagaaattcaccttaaaggtgaataagtgggg 585  Q
    |||||||||||||||||||| |||||||||||||    
T  3974542 tagagaaattcaccttaaagatgaataagtgggg 3974509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 558 - 602
Target Start/End: Original strand, 6270608 - 6270653
Alignment:
Q  558 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 602  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  6270608 aattcaccttataaggtgaataattggggtgttcagggttcgaacc 6270653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 534 - 587
Target Start/End: Complemental strand, 11552990 - 11552937
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtg 587  Q
    |||||| || |||| ||||||| ||||| ||||||||| |||||||||||||||    
T  11552990 gtcaagtagactagtggctagaaaaatttaccttaaagatgaataagtggggtg 11552937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 544 - 652
Target Start/End: Original strand, 24794881 - 24794990
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtga 642  Q
    |||| ||||||||||||||| ||||||  |||||||||||| |||   ||||||||| ||   ||||| || ||| | |||||||| ||||||||| |||    
T  24794881 ctagtggctagagaaattcatcttaaatatgaataagtgggatgtccggggttcgaatcccaacccctgcacatattgtgcattatcccttaccaaatga 24794980  T
Q  643 gataagctca 652  Q
    | ||||||||    
T  24794981 gctaagctca 24794990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0699 (Bit Score: 77; Significance: 4e-35; HSPs: 1)
Name: scaffold0699
Description:

Target: scaffold0699; HSP #1
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 795 - 946
Target Start/End: Complemental strand, 174 - 23
Alignment:
Q  795 gcggacgctttttactcccctgtgtaaaatacaagattgcccttcacttaaaaccgttttaagggtcattttttgtaattttcaaaacgctaacta-tac 893  Q
    |||| ||||||| ||  ||||||||||||||| ||||| ||||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| |||    
T  174 gcggccgcttttgacaaccctgtgtaaaatactagatttcccttcatttaaaaccattttaagggtcat-ttttgtaattttcaaaaccctaactattac 76  T
Q  894 tcttctccatcagaaccaaatacacaactgcaaaaacaacttcttcatcgtac 946  Q
    ||||||||| |||||||||||||||| |  ||||  |||||||||||||||||    
T  75 tcttctccaccagaaccaaatacacagccacaaactcaacttcttcatcgtac 23  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 534 - 652
Target Start/End: Complemental strand, 419831 - 419712
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 632  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | | |||||| |||    
T  419831 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgttcattatccct 419732  T
Q  633 taccaagtgagataagctca 652  Q
    |||||| |||| ||||||||    
T  419731 taccaaatgagctaagctca 419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 544 - 649
Target Start/End: Complemental strand, 22568 - 22462
Alignment:
Q  544 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattccttaccaagtga 642  Q
    |||||| ||| | ||||||||||||||  |||||||||||| |||   ||||||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  22568 ctagcgactaaaaaaattcaccttaaaaatgaataagtgggatgtctggggttcgaacctcagcccctacatataatatgtattatcccttaccaagtga 22469  T
Q  643 gataagc 649  Q
    | |||||    
T  22468 gctaagc 22462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 550 - 652
Target Start/End: Original strand, 44711 - 44814
Alignment:
Q  550 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaagtgagataag 648  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||||||||||| |   |||| || || | |||||||||||||||||||| |||  ||||    
T  44711 gctagagatattcaccttaaaggtaaataagtagggtgttcagggttcgaactccaacccccacttaaattatgcattattccttaccaaatgaactaag 44810  T
Q  649 ctca 652  Q
    ||||    
T  44811 ctca 44814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 569 - 620
Target Start/End: Original strand, 22861 - 22912
Alignment:
Q  569 aaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataata 620  Q
    ||||||||||||||||||||  ||||||||||||  |||||| |||||||||    
T  22861 aaggtgaataagtggggtgtccagggttcgaacccggcccctgcatataata 22912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 534 - 601
Target Start/End: Original strand, 44331 - 44398
Alignment:
Q  534 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 601  Q
    |||||| || || ||||||||| |||||||||||||| || |||||||| ||||||  ||||||||||    
T  44331 gtcaagtagtctggcggctagaaaaattcaccttaaatgtaaataagtgaggtgttcggggttcgaac 44398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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