View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9026_low_41 (Length: 393)

Name: NF9026_low_41
Description: NF9026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9026_low_41
NF9026_low_41
[»] chr5 (30 HSPs)
chr5 (194-362)||(5651158-5651326)
chr5 (194-362)||(7125136-7125304)
chr5 (194-362)||(28623138-28623306)
chr5 (194-346)||(4549897-4550049)
chr5 (194-346)||(37014265-37014417)
chr5 (194-346)||(39852781-39852933)
chr5 (194-356)||(4240095-4240257)
chr5 (194-346)||(13926342-13926494)
chr5 (194-341)||(1460790-1460937)
chr5 (194-346)||(5949523-5949674)
chr5 (236-352)||(33892823-33892939)
chr5 (223-363)||(37798090-37798230)
chr5 (204-347)||(29716777-29716920)
chr5 (236-329)||(2675078-2675171)
chr5 (194-346)||(40013344-40013496)
chr5 (194-327)||(16548850-16548984)
chr5 (234-329)||(21238763-21238858)
chr5 (198-362)||(29758672-29758834)
chr5 (194-346)||(13999733-13999885)
chr5 (198-362)||(34218435-34218590)
chr5 (236-323)||(34909596-34909683)
chr5 (236-362)||(16497707-16497833)
chr5 (244-309)||(25868811-25868876)
chr5 (271-346)||(1151930-1152005)
chr5 (194-309)||(21489862-21489977)
chr5 (260-362)||(31913526-31913628)
chr5 (276-329)||(19223054-19223107)
chr5 (236-329)||(15286536-15286631)
chr5 (236-329)||(3032311-3032403)
chr5 (103-140)||(6726912-6726949)
[»] chr1 (55 HSPs)
chr1 (194-367)||(5209333-5209506)
chr1 (194-362)||(4005050-4005218)
chr1 (194-360)||(47371547-47371713)
chr1 (194-362)||(9192007-9192175)
chr1 (194-362)||(51106875-51107043)
chr1 (194-362)||(1243276-1243444)
chr1 (194-362)||(41353404-41353572)
chr1 (194-362)||(8147300-8147468)
chr1 (194-362)||(26757598-26757766)
chr1 (194-361)||(48966462-48966629)
chr1 (194-346)||(45272977-45273129)
chr1 (236-359)||(11579073-11579196)
chr1 (194-360)||(3583528-3583694)
chr1 (194-347)||(49453045-49453199)
chr1 (194-347)||(5494733-5494886)
chr1 (194-356)||(46328396-46328558)
chr1 (194-346)||(15834670-15834822)
chr1 (194-341)||(35177201-35177349)
chr1 (19-165)||(32238556-32238699)
chr1 (194-363)||(28403915-28404084)
chr1 (194-363)||(32760068-32760228)
chr1 (194-346)||(6312986-6313138)
chr1 (194-346)||(8140869-8141021)
chr1 (194-346)||(25612502-25612654)
chr1 (194-346)||(29396070-29396222)
chr1 (194-324)||(49236974-49237104)
chr1 (194-346)||(25830885-25831037)
chr1 (194-356)||(38535772-38535934)
chr1 (194-356)||(38557990-38558152)
chr1 (246-363)||(42304469-42304586)
chr1 (196-328)||(15927284-15927416)
chr1 (194-362)||(25253477-25253644)
chr1 (236-329)||(7798525-7798618)
chr1 (194-346)||(48177078-48177231)
chr1 (194-346)||(51702005-51702157)
chr1 (239-329)||(33886863-33886953)
chr1 (239-329)||(33957297-33957387)
chr1 (194-327)||(49971599-49971734)
chr1 (244-346)||(18798912-18799014)
chr1 (260-329)||(34019168-34019237)
chr1 (253-329)||(34751575-34751651)
chr1 (244-356)||(49231467-49231579)
chr1 (204-327)||(52182319-52182443)
chr1 (236-327)||(1108377-1108468)
chr1 (194-309)||(9322181-9322296)
chr1 (203-318)||(27257872-27257987)
chr1 (39-195)||(33086881-33087034)
chr1 (42-165)||(36815488-36815608)
chr1 (194-323)||(3593238-3593358)
chr1 (236-309)||(18954490-18954563)
chr1 (274-346)||(29219611-29219683)
chr1 (69-185)||(4150748-4150861)
chr1 (204-331)||(51901945-51902072)
chr1 (236-317)||(21248490-21248571)
chr1 (293-346)||(28387091-28387144)
[»] chr2 (45 HSPs)
chr2 (194-335)||(15224192-15224333)
chr2 (194-362)||(18899899-18900067)
chr2 (194-362)||(40829596-40829766)
chr2 (194-346)||(28739933-28740085)
chr2 (194-346)||(10657841-10657993)
chr2 (194-346)||(18177682-18177834)
chr2 (194-360)||(2308687-2308853)
chr2 (194-356)||(6224206-6224368)
chr2 (194-347)||(31847204-31847358)
chr2 (194-346)||(7027314-7027466)
chr2 (194-346)||(28844996-28845148)
chr2 (194-356)||(25288574-25288736)
chr2 (236-329)||(13898480-13898573)
chr2 (236-329)||(14039097-14039190)
chr2 (243-360)||(18727620-18727737)
chr2 (194-356)||(33136029-33136189)
chr2 (194-340)||(379341-379487)
chr2 (236-329)||(3991777-3991870)
chr2 (194-347)||(13833057-13833210)
chr2 (236-341)||(35404311-35404416)
chr2 (236-329)||(38413458-38413551)
chr2 (244-329)||(19948550-19948635)
chr2 (194-346)||(26789196-26789348)
chr2 (194-341)||(34342200-34342347)
chr2 (236-362)||(41978841-41978976)
chr2 (236-346)||(3575294-3575404)
chr2 (245-347)||(38295704-38295806)
chr2 (236-329)||(33262857-33262950)
chr2 (236-327)||(15926382-15926474)
chr2 (193-363)||(43304942-43305112)
chr2 (236-329)||(11153354-11153447)
chr2 (260-329)||(45161137-45161206)
chr2 (194-297)||(214945-215048)
chr2 (260-346)||(43825317-43825403)
chr2 (236-362)||(12877690-12877816)
chr2 (203-327)||(3858427-3858552)
chr2 (248-327)||(32293928-32294008)
chr2 (260-356)||(43078967-43079063)
chr2 (250-327)||(32242211-32242289)
chr2 (237-321)||(37810895-37810979)
chr2 (277-328)||(43318766-43318817)
chr2 (236-329)||(30850272-30850364)
chr2 (236-326)||(1833712-1833803)
chr2 (293-346)||(3464112-3464165)
chr2 (15-91)||(12768344-12768420)
[»] chr4 (59 HSPs)
chr4 (194-362)||(23671347-23671515)
chr4 (223-366)||(8084200-8084343)
chr4 (223-362)||(29469154-29469293)
chr4 (194-340)||(29510061-29510207)
chr4 (194-347)||(49501170-49501323)
chr4 (194-347)||(49507235-49507388)
chr4 (194-362)||(50517164-50517323)
chr4 (194-356)||(29855927-29856089)
chr4 (204-341)||(41725534-41725671)
chr4 (52-179)||(4892191-4892316)
chr4 (194-356)||(49834462-49834624)
chr4 (194-347)||(32322477-32322631)
chr4 (236-362)||(42937384-42937510)
chr4 (34-193)||(4872352-4872510)
chr4 (194-346)||(5441813-5441965)
chr4 (194-346)||(30966981-30967133)
chr4 (194-356)||(28484306-28484469)
chr4 (198-327)||(871776-871905)
chr4 (194-356)||(5800375-5800537)
chr4 (236-362)||(24966492-24966618)
chr4 (194-315)||(32889858-32889979)
chr4 (194-346)||(23987608-23987759)
chr4 (194-346)||(27768475-27768627)
chr4 (194-346)||(48261489-48261641)
chr4 (236-347)||(26491111-26491222)
chr4 (236-329)||(6487324-6487417)
chr4 (194-347)||(46286680-46286824)
chr4 (194-346)||(37828068-37828220)
chr4 (194-346)||(50018603-50018755)
chr4 (194-346)||(51321267-51321419)
chr4 (194-309)||(33138771-33138877)
chr4 (236-329)||(51967281-51967374)
chr4 (244-329)||(9972785-9972870)
chr4 (236-352)||(8563341-8563457)
chr4 (194-336)||(54341553-54341695)
chr4 (194-342)||(54853118-54853266)
chr4 (236-328)||(56423982-56424074)
chr4 (194-327)||(55165487-55165621)
chr4 (244-329)||(26448643-26448728)
chr4 (236-329)||(40162793-40162886)
chr4 (244-329)||(54561231-54561316)
chr4 (194-346)||(32683666-32683817)
chr4 (277-356)||(37916283-37916362)
chr4 (237-362)||(41470299-41470424)
chr4 (231-328)||(23170738-23170835)
chr4 (236-329)||(14334398-14334491)
chr4 (236-329)||(21486519-21486612)
chr4 (274-328)||(29966401-29966455)
chr4 (236-309)||(46862941-46863014)
chr4 (236-308)||(25013450-25013522)
chr4 (246-329)||(21306311-21306394)
chr4 (265-328)||(22479852-22479915)
chr4 (236-291)||(40487703-40487758)
chr4 (274-328)||(25843004-25843058)
chr4 (236-305)||(2326691-2326760)
chr4 (275-327)||(24453923-24453976)
chr4 (288-329)||(26955392-26955433)
chr4 (293-346)||(29649643-29649696)
chr4 (194-271)||(37916212-37916289)
[»] scaffold1128 (1 HSPs)
scaffold1128 (194-347)||(890-1043)
[»] chr8 (43 HSPs)
chr8 (194-362)||(8029811-8029979)
chr8 (194-362)||(19484177-19484345)
chr8 (15-178)||(26946968-26947129)
chr8 (194-341)||(10294982-10295129)
chr8 (194-347)||(31625719-31625872)
chr8 (194-346)||(9288132-9288284)
chr8 (204-356)||(26856526-26856678)
chr8 (194-346)||(18305614-18305766)
chr8 (194-346)||(19717512-19717664)
chr8 (193-312)||(12522528-12522647)
chr8 (194-346)||(14781770-14781922)
chr8 (194-346)||(18958365-18958517)
chr8 (194-346)||(39467156-39467308)
chr8 (238-360)||(27878607-27878729)
chr8 (238-360)||(28018788-28018910)
chr8 (194-327)||(6388131-6388264)
chr8 (204-327)||(17234686-17234810)
chr8 (236-360)||(27915551-27915675)
chr8 (236-360)||(27961970-27962094)
chr8 (204-356)||(32497962-32498114)
chr8 (194-346)||(42305242-42305394)
chr8 (194-346)||(43166314-43166466)
chr8 (194-346)||(44725429-44725581)
chr8 (194-356)||(16364117-16364279)
chr8 (196-346)||(43308146-43308296)
chr8 (236-329)||(28317075-28317168)
chr8 (21-193)||(3507166-3507344)
chr8 (244-329)||(41252176-41252261)
chr8 (236-327)||(24067110-24067202)
chr8 (244-327)||(37131291-37131375)
chr8 (231-329)||(1527908-1528006)
chr8 (234-329)||(33177851-33177946)
chr8 (223-346)||(12522420-12522531)
chr8 (231-341)||(41393955-41394065)
chr8 (221-346)||(7466759-7466884)
chr8 (255-347)||(26620331-26620423)
chr8 (11-78)||(3507903-3507970)
chr8 (194-327)||(7760770-7760904)
chr8 (204-309)||(24082184-24082289)
chr8 (303-360)||(42423261-42423318)
chr8 (153-191)||(25725502-25725540)
chr8 (308-346)||(37857409-37857447)
chr8 (275-327)||(35879722-35879775)
[»] chr6 (25 HSPs)
chr6 (194-362)||(1463641-1463809)
chr6 (194-362)||(6788062-6788230)
chr6 (193-362)||(3000201-3000370)
chr6 (194-361)||(16438668-16438835)
chr6 (194-362)||(10113750-10113918)
chr6 (204-341)||(31975643-31975780)
chr6 (194-360)||(2606857-2607023)
chr6 (194-346)||(31896047-31896199)
chr6 (194-331)||(7497508-7497645)
chr6 (194-331)||(14262090-14262227)
chr6 (236-329)||(31996251-31996344)
chr6 (194-341)||(31067842-31067989)
chr6 (194-346)||(30384703-30384855)
chr6 (194-338)||(34758726-34758870)
chr6 (236-328)||(21199558-21199650)
chr6 (194-341)||(4200095-4200242)
chr6 (236-327)||(8779586-8779677)
chr6 (196-307)||(28900863-28900965)
chr6 (244-324)||(31535068-31535148)
chr6 (253-362)||(12028996-12029105)
chr6 (236-318)||(13461377-13461459)
chr6 (236-309)||(7835387-7835460)
chr6 (272-346)||(34773873-34773947)
chr6 (288-347)||(24194469-24194529)
chr6 (259-326)||(21010883-21010950)
[»] chr3 (48 HSPs)
chr3 (194-362)||(8598621-8598789)
chr3 (194-362)||(49296078-49296246)
chr3 (194-347)||(48379559-48379712)
chr3 (223-352)||(53835953-53836082)
chr3 (194-358)||(7437546-7437710)
chr3 (204-360)||(33693228-33693384)
chr3 (194-341)||(21386476-21386623)
chr3 (194-356)||(52810767-52810929)
chr3 (194-347)||(26107738-26107891)
chr3 (15-193)||(12074193-12074370)
chr3 (236-360)||(16155168-16155292)
chr3 (194-346)||(37455256-37455408)
chr3 (236-360)||(49458362-49458486)
chr3 (194-346)||(50761739-50761891)
chr3 (194-361)||(4962703-4962870)
chr3 (194-362)||(7665553-7665720)
chr3 (198-356)||(20833310-20833468)
chr3 (194-356)||(54629260-54629422)
chr3 (194-346)||(31645900-31646052)
chr3 (194-346)||(40897540-40897692)
chr3 (236-342)||(22489475-22489581)
chr3 (194-356)||(50902938-50903100)
chr3 (11-194)||(15672100-15672280)
chr3 (194-339)||(51737333-51737478)
chr3 (194-331)||(52617626-52617763)
chr3 (194-346)||(23753028-23753180)
chr3 (194-341)||(39038499-39038646)
chr3 (194-356)||(44905484-44905646)
chr3 (236-329)||(9818568-9818661)
chr3 (194-341)||(18750052-18750199)
chr3 (195-341)||(17946638-17946780)
chr3 (194-315)||(43172889-43173010)
chr3 (236-327)||(25049875-25049967)
chr3 (194-346)||(36673791-36673943)
chr3 (205-327)||(45602422-45602545)
chr3 (260-329)||(47467415-47467484)
chr3 (194-341)||(42736269-42736416)
chr3 (260-346)||(34483737-34483823)
chr3 (275-329)||(49293846-49293900)
chr3 (236-329)||(37832576-37832669)
chr3 (274-329)||(27261435-27261490)
chr3 (236-329)||(40064282-40064375)
chr3 (194-269)||(45863232-45863307)
chr3 (239-314)||(53645332-53645407)
chr3 (244-298)||(2118472-2118526)
chr3 (194-288)||(21718458-21718552)
chr3 (236-329)||(19386895-19386987)
chr3 (236-297)||(27994807-27994868)
[»] chr7 (52 HSPs)
chr7 (194-362)||(14741388-14741556)
chr7 (194-362)||(4639844-4640012)
chr7 (11-111)||(18790960-18791060)
chr7 (194-347)||(42610579-42610732)
chr7 (194-356)||(29893381-29893543)
chr7 (194-356)||(37328316-37328478)
chr7 (194-346)||(33891878-33892030)
chr7 (194-347)||(12740779-12740932)
chr7 (194-339)||(44256406-44256551)
chr7 (194-356)||(8675740-8675903)
chr7 (197-346)||(40460358-40460507)
chr7 (194-346)||(510055-510207)
chr7 (194-346)||(18838819-18838971)
chr7 (194-346)||(28342720-28342872)
chr7 (194-346)||(39028496-39028648)
chr7 (194-346)||(39784516-39784668)
chr7 (194-341)||(23016954-23017101)
chr7 (194-356)||(37972511-37972673)
chr7 (198-356)||(44121567-44121725)
chr7 (194-347)||(7993566-7993719)
chr7 (194-347)||(29585923-29586076)
chr7 (194-346)||(29614439-29614591)
chr7 (119-193)||(18791654-18791728)
chr7 (194-346)||(23101700-23101852)
chr7 (194-346)||(28034492-28034644)
chr7 (194-309)||(32884180-32884295)
chr7 (244-362)||(21024078-21024196)
chr7 (194-356)||(41827737-41827899)
chr7 (194-346)||(3023343-3023495)
chr7 (194-333)||(16709397-16709534)
chr7 (194-333)||(17683633-17683770)
chr7 (194-298)||(43172116-43172220)
chr7 (236-356)||(48136862-48136982)
chr7 (194-327)||(26201794-26201928)
chr7 (236-329)||(14732298-14732391)
chr7 (244-327)||(11735194-11735278)
chr7 (236-329)||(35313561-35313654)
chr7 (194-289)||(33383083-33383178)
chr7 (274-356)||(21067869-21067951)
chr7 (244-356)||(21486154-21486266)
chr7 (255-347)||(30823108-30823200)
chr7 (259-329)||(19594237-19594307)
chr7 (194-318)||(27148807-27148931)
chr7 (244-318)||(33497107-33497181)
chr7 (236-362)||(37915875-37915992)
chr7 (259-329)||(38910508-38910578)
chr7 (260-346)||(47067185-47067271)
chr7 (244-329)||(6268513-6268598)
chr7 (236-329)||(34656609-34656702)
chr7 (263-329)||(1254471-1254537)
chr7 (261-309)||(36415080-36415128)
chr7 (244-329)||(31174721-31174806)
[»] scaffold0543 (1 HSPs)
scaffold0543 (194-346)||(10935-11087)
[»] scaffold0989 (1 HSPs)
scaffold0989 (15-193)||(1143-1319)
[»] scaffold0042 (1 HSPs)
scaffold0042 (194-356)||(57693-57855)
[»] scaffold0013 (1 HSPs)
scaffold0013 (194-331)||(89242-89379)
[»] scaffold0110 (1 HSPs)
scaffold0110 (204-356)||(39264-39416)
[»] scaffold1504 (1 HSPs)
scaffold1504 (194-331)||(1277-1414)
[»] scaffold0421 (1 HSPs)
scaffold0421 (260-329)||(1727-1796)
[»] scaffold0573 (1 HSPs)
scaffold0573 (196-307)||(8829-8931)
[»] scaffold0246 (2 HSPs)
scaffold0246 (236-352)||(1371-1487)
scaffold0246 (236-291)||(25642-25697)
[»] scaffold0383 (1 HSPs)
scaffold0383 (260-347)||(16667-16754)
[»] scaffold0152 (2 HSPs)
scaffold0152 (260-347)||(20903-20990)
scaffold0152 (260-347)||(28811-28898)
[»] scaffold0347 (1 HSPs)
scaffold0347 (254-346)||(15132-15228)
[»] scaffold0263 (1 HSPs)
scaffold0263 (312-362)||(439-489)


Alignment Details
Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 5651326 - 5651158
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5651326 aatgttccgcaaatcgagtgttaacacttcgagtttatcgattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 5651227  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5651226 aattgaaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 5651158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 7125304 - 7125136
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  7125304 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 7125205  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7125204 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 7125136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 28623306 - 28623138
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||| | | ||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||| |    
T  28623306 aatgttccacaaatcgcgtgtcaactcagcgagtttatcgagtttacgtgtttaggtgctaaaaacgtgttaactcggagataaactcgatttctggtaa 28623207  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  28623206 aattgcaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 28623138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 4550049 - 4549897
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||||||||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  4550049 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtgtttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 4549950  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| ||||||| |||| | ||||||||||||    
T  4549949 aattggaaggtttaacgagtttgactgagttaatactctgcaaactcgtgtaa 4549897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 37014265 - 37014417
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||| || ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  37014265 aatgtttcgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 37014364  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| | || |||| |||||||||||||||||||||||| ||||||||||||||    
T  37014365 aattgaaaggtttaacgagtttgaccgagttaacactcggtaaactcgtgtaa 37014417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 39852781 - 39852933
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||||||| |||| |    
T  39852781 aatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggtaa 39852880  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  39852881 aattggaaggtttaacgagtttgacggagttaacactcggtaaactcgtgtaa 39852933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 4240257 - 4240095
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| |||||||||| ||| ||| ||||| | ||||||| ||||||| | |||||||||||||||| |||||||||||  |||||||| |    
T  4240257 aatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtgcaaaaatcgtgttaactctgaggtaaactccgtttctggtaa 4240158  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| |||||||||||  ||||||||||| ||||||||||||||| ||| ||||    
T  4240157 aatcggaaggtttaacgagtttgacaaagttaacactcggtaaactcgtgtaaactcgaccga 4240095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 13926342 - 13926494
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||| | | ||||||| ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  13926342 aatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 13926441  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| | |||||||||  ||||||||||| ||||||||||||||    
T  13926442 aattggaaggtttaaggagtttgactaagttaacactcggtaaactcgtgtaa 13926494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 1460937 - 1460790
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||  ||| ||||| | ||||||| ||||||||| ||||| |||||||||| |||||||||||| |||||||| |    
T  1460937 aatgttccgcaaatcgagtgttaactctttgagattaccgagtttacgtttttaggtacaaaaattgtgttaactcagaggtaaactcggtttctggtaa 1460838  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    |||||||| | || ||||||||||| |||||||||||| |||||||||    
T  1460837 aatcggaaggcttaacgagtttgactgagttaacactcggtaaactcg 1460790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 5949523 - 5949674
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||| ||||| ||||||| ||| || ||| |||| ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  5949523 aatgttccgcaaatcgagtattaactctccgagattatcagttt-acgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 5949621  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| |||||| |||||||    
T  5949622 aattggaaggtttaacgagtttgactgagttaacactcggtaaacacgtgtaa 5949674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 236 - 352
Target Start/End: Complemental strand, 33892939 - 33892823
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    ||    
T  33892939 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttgatgaaatcggaaagtttgacgagtttgaccgagttaacacgtgtta 33892840  T
Q  336 aactcgtgtaaaatcgg 352  Q
    |||||||||||| ||||    
T  33892839 aactcgtgtaaactcgg 33892823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 363
Target Start/End: Complemental strand, 37798230 - 37798090
Alignment:
Q  223 cgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgag 322  Q
    |||||||||| | ||||||||||||  |   |||| |||||||||||  |||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  37798230 cgagtttaccgagtttacgtgtttatctgttaaaaacgtgttaactcaaaggtaaactcaatttctggtaaaatcgaaaagtttgacgagtttgaccgag 37798131  T
Q  323 ttaacactcagtaaactcgtgtaaaatcggccgagtttact 363  Q
    ||||||||| |||||||||||| |||||||  |||||||||    
T  37798130 ttaacactcggtaaactcgtgtgaaatcgggtgagtttact 37798090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 204 - 347
Target Start/End: Complemental strand, 29716920 - 29716777
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||||||||||||| |||| |||||||  | ||||||| |||||||| |||||||||||||||||| ||||||||| |||||||||| ||||| ||| |    
T  29716920 aaatcgagtgttaactctccaagtttacggagtttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaacttgatttctggtaaaatcagaagg 29716821  T
Q  304 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    ||||||||||| || || || ||||||  |||||||||||||||    
T  29716820 tttgacgagttggatcgggtgaacacttggtaaactcgtgtaaa 29716777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 2675171 - 2675078
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  2675171 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 2675078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 40013496 - 40013344
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||| | |||| |||  |||||||||||||||| |||||||| ||| |||||||| |    
T  40013496 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 40013397  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| || || ||||| |||||||||||| ||||||||||||||    
T  40013396 aattggaaggtttaacaagattgactgagttaacactcggtaaactcgtgtaa 40013344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 327
Target Start/End: Complemental strand, 16548984 - 16548850
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||||| |||||||||||||||| |   ||||||| | | ||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| |    
T  16548984 aatgttccataaatcgagtgttaactcattgagtttatcgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcaatttctggtaa 16548885  T
Q  294 aatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||| || ||||||||| |||||| |||||||||    
T  16548884 aatcgaaatgtttgacgaatttgactcgagttaac 16548850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 234 - 329
Target Start/End: Complemental strand, 21238858 - 21238763
Alignment:
Q  234 attttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||||| ||||| |  ||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  21238858 attttacgtttttagatggcaaaaacgtgttaactcggaggtaaactcggtttttggtaaaatcggaaagtttgacgagtttgaccgagttaacac 21238763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 198 - 362
Target Start/End: Original strand, 29758672 - 29758834
Alignment:
Q  198 ttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatc 297  Q
    |||||||||| |||||||||| |    |||||| | | ||||||| |||||||| |||||||||||||||||||||||| | | |||||||||| |||||    
T  29758672 ttccgtaaattgagtgttaactcgttaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaactcggaggtagatttgatttctggt-aaatc 29758770  T
Q  298 ggaaagtttgacgagtttgac-cgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    |||| |||||||||||||||| |||||||  |||| ||||||| ||||||| ||| ||||||||||    
T  29758771 ggaatgtttgacgagtttgactcgagtta--actcggtaaacttgtgtaaactcgaccgagtttac 29758834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 13999885 - 13999733
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| |||   | || || | ||||||||| |||||||||||||||  ||| |||| ||| |||||||| |    
T  13999885 aatgttccgcaaatcgagtgttaaatctccgagattatggagttgacatttttaggtacaaaaatcgtgttaactttgagataaaatcggtttctggtaa 13999786  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  13999785 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 13999733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 198 - 362
Target Start/End: Original strand, 34218435 - 34218590
Alignment:
Q  198 ttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatc 297  Q
    ||||| |||| |||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||| ||| ||||||| ||| |||||| | |||||    
T  34218435 ttccgcaaattgagtgttaacactctgagtttaccaagtttacgtttttagataccaaaatcgtgttaattcgaaggtaaattcggtttctgctaaaatc 34218534  T
Q  298 ggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
     |||          ||||||||||||||| |||||||||| ||||||||| ||| ||||||||||    
T  34218535 agaa---------ggtttgaccgagttaatactcagtaaattcgtgtaaactcgaccgagtttac 34218590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 34909596 - 34909683
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagt 323  Q
    ||||||| |||||||  ||||| |||||||| ||||||||||||||| | | ||||||||||||||||||||| ||||||||||||||    
T  34909596 tttacgtttttaggtggcaaaaacgtgttaattcggaggtaaactcggtctttggtgaaatcggaaagtttgaggagtttgaccgagt 34909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 362
Target Start/End: Complemental strand, 16497833 - 16497707
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| ||||||| ||||||  ||||||| ||  || |||||||||||| || ||||||||||| ||||||||||||||||||| ||||||     ||    
T  16497833 tttacgtttttaggtgccaaaaatgtgttaattcaaagataaactcgatttttgctgaaatcggaatgtttgacgagtttgaccgacttaacatgtgtta 16497734  T
Q  336 aactcgtgtaaaatcggccgagtttac 362  Q
    ||||| |||||||||| | ||||||||    
T  16497733 aactcatgtaaaatcgacagagtttac 16497707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 25868811 - 25868876
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgac 309  Q
    |||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  25868811 tttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 25868876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 1152005 - 1151930
Alignment:
Q  271 gaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||||| || ||| |||||||| |||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  1152005 gaggtgaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 1151930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 21489862 - 21489977
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||||||||||||  | | ||||||   ||||||| | |||||||||||||||||||| || ||| || |||||| |||||||||| |    
T  21489862 aatgttccacaaatcgagtgttaacttttcaagtttattgattttacatttttaggtaccaaaatcgtgtcaattcgaagataaacttgatttctggtaa 21489961  T
Q  294 aatcggaaagtttgac 309  Q
    |||| ||| |||||||    
T  21489962 aatctgaatgtttgac 21489977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 31913526 - 31913628
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtt 359  Q
    ||||||||| ||||||||||||||||| ||||||||||| || ||| | ||| ||||| ||||||||||     |||||||| ||||| ||| |||||||    
T  31913526 gtgttaacttggaggtaaactcgatttttggtgaaatcgaaatgttcgtcgaatttgatcgagttaacatgtgttaaactcgagtaaactcgaccgagtt 31913625  T
Q  360 tac 362  Q
    |||    
T  31913626 tac 31913628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Original strand, 19223054 - 19223107
Alignment:
Q  276 aaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| ||| |||||||||||||||||||||||||| | |||||||||||||    
T  19223054 aaactcggtttttggtgaaatcggaaagtttgacgagtgtaaccgagttaacac 19223107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 15286631 - 15286536
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactc--gatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||||||||| ||||||||| |||||||    ||| |||| |||||||||||||   |||||||||| ||||||||||    
T  15286631 tttacgtttttaggtgtcaaaatcgtgtaaactcggagataaactctttttttttggtaaaatcggaaagttgaccgagtttgactgagttaacac 15286536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 3032311 - 3032403
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| | |||||  ||||||||| ||| |||||||||||| ||| ||| || |||||||  || ||||| ||||||||| |||||||||||    
T  3032311 tttacgtctgtaggtgtcaaaatcgtattagctcggaggtaaaatcgttttttgttgaaatcataatgtttg-cgagtttgagcgagttaacac 3032403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 6726912 - 6726949
Alignment:
Q  103 ctttttatataggctctaaaagagagttctagacacat 140  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  6726912 ctttttatataggctccaaatgagagttctagacacat 6726949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 3e-67; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 194 - 367
Target Start/End: Complemental strand, 5209506 - 5209333
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5209506 aatgttccgcaaatcgagtgttaacactctgagtttatcgtttttacgtgtttaggtaccaaaatcgtgttaactcggaggtcaactcgatttctggtga 5209407  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttactcctc 367  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  5209406 aatcagaaagtttgacgagtttgatcgagttaacactcaataaacttgtgtaaaatcagccgagtttactcctc 5209333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 4005050 - 4005218
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  4005050 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 4005149  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4005150 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 4005218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 194 - 360
Target Start/End: Complemental strand, 47371713 - 47371547
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||| || ||||||||||||||||||| ||||||| | | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  47371713 aatgtttcgcaaatcgagtgttaacactctgagtttatcgagtttacgtacttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaa 47371614  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttt 360  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  47371613 aatcggaaggtttgccgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttt 47371547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 9192007 - 9192175
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  9192007 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 9192106  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9192107 aatcagaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 9192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 51106875 - 51107043
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| |||||||||||||||| |||||||||||||||| |    
T  51106875 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggaaaactcgatttctggtaa 51106974  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51106975 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 51107043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 1243444 - 1243276
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  1243444 aatgttccacaaatcgcgtgtcaactcggcgagtttacctagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 1243345  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  1243344 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcgggcgagtttac 1243276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 41353404 - 41353572
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | |||| |||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  41353404 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 41353503  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  41353504 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 41353572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 8147300 - 8147468
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  8147300 aatgttccacaaatcgcgtgtcaactcagcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 8147399  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  8147400 aattgcaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 8147468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 26757598 - 26757766
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| || |||||||| ||||||||||||||||||||| |    
T  26757598 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgagttaactcagaggtaaactcgatttctggtaa 26757697  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  26757698 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 26757766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 194 - 361
Target Start/End: Complemental strand, 48966629 - 48966462
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||||||| |||||| || |||||||||  | |||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||    
T  48966629 aatgttccgcaaatcgagggttaactcttcgagtttactgagtttacgtgtttaggtaccaaaatcgtgttaactctgaggtaaacttgatttctgatga 48966530  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttta 361  Q
    ||| |||| |||||||||||||||||||||||| |||| ||||||||||||||| ||  |||||||||    
T  48966529 aattggaaggtttgacgagtttgaccgagttaatactcggtaaactcgtgtaaactctaccgagttta 48966462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 45272977 - 45273129
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||| | | ||||||| ||||||||| ||||| |||||||||| |||||||||||| |||||||| |    
T  45272977 aatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggtaa 45273076  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  45273077 aatcggaaggtttgacgagtttgactgagttaacactcggtaaactcgtgtaa 45273129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 236 - 359
Target Start/End: Complemental strand, 11579196 - 11579073
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||||||||||| | |||| |||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  11579196 tttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaatttgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagta 11579097  T
Q  336 aactcgtgtaaaatcggccgagtt 359  Q
    ||||||||| ||||||| ||||||    
T  11579096 aactcgtgtgaaatcgggcgagtt 11579073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 194 - 360
Target Start/End: Complemental strand, 3583694 - 3583528
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||||||||| | ||||||| |||||||||| ||||||||||||||  || ||||||||| ||||| || |    
T  3583694 aatgttccgcaaatcgagtgttaactctccgagtttaccgagtttacgtttttaggtaccgaaatcgtgttaacttagaagtaaactcggtttctagtaa 3583595  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttt 360  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||| ||  ||||||||    
T  3583594 aatcggaaagtttgacgagtttaaccgagttaacactcggtaaacttgtgcaaactcaaccgagttt 3583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 194 - 347
Target Start/End: Complemental strand, 49453199 - 49453045
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaa-tcgtgttaactcggaggtaaactcgatttctggtg 292  Q
    ||||||||| |||||||||||||||  |||||||||||| | |||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||      
T  49453199 aatgttccgcaaatcgagtgttaactgtccgagtttacctagtttatgtgtttaggtaccaaaaatcgtgttaactctgaggtaaactcgatttctggaa 49453100  T
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||  || ||||||| ||||||||||||||||||||| |||||||||||||||    
T  49453099 aaatcataaggtttgacaagtttgaccgagttaacactcggtaaactcgtgtaaa 49453045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 194 - 347
Target Start/End: Complemental strand, 5494886 - 5494733
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| |||||||||| ||||||| ||||| | ||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| |    
T  5494886 aatgttccgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctggtaa 5494787  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||| ||| |||||| ||||||||| ||||||||||||  ||||||||||||||    
T  5494786 aatcagaaggtttgatgagtttgactgagttaacactcgataaactcgtgtaaa 5494733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 46328396 - 46328558
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||||||| |||||| | |    
T  46328396 aatgttccgcaaatcgagtgttaattctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctgttaa 46328495  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| ||||||||||  |||||||||||| ||||||||||||||| ||| ||||    
T  46328496 aatcggaaggtttaacgagtttgattgagttaacactcggtaaactcgtgtaaactcgaccga 46328558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 15834822 - 15834670
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| |||||||||||||||| |||||||| ||||||| |||| |    
T  15834822 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggtaa 15834723  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  15834722 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 15834670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 35177349 - 35177201
Alignment:
Q  194 aatgttccgtaaatcgagtgtt-aacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 292  Q
    |||| |||| |||||||||||| ||||||||||||||| ||| |||| || ||||||||||||||||||||||| || ||||||||||||||||||| |     
T  35177349 aatggtccgcaaatcgagtgtttaacactccgagtttatcaaatttatgtttttaggtaccaaaatcgtgttaattcagaggtaaactcgatttctgata 35177250  T
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||||||||| | |||||||||||||||||||||||||||  ||||||||    
T  35177249 aaatcggaaggattgacgagtttgaccgagttaacactcgataaactcg 35177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 32238699 - 32238556
Alignment:
Q  19 cttgagagaagaactatttctattacttgagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttatataggctc 118  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||| || ||||||||  |||||||||    
T  32238699 cttgagagaataactattt-tattacttgagaggatactttgattcttctttgcttgcttgatttacaaatgacaagctctcccctttt--tataggctc 32238603  T
Q  119 taaaagagagttctagacacatcatatgataactttctacacacttc 165  Q
     ||  ||||||||||||||||||||  ||||||||||||||||||||    
T  32238602 caagggagagttctagacacatcatgagataactttctacacacttc 32238556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 194 - 363
Target Start/End: Complemental strand, 28404084 - 28403915
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| || ||| |||||  | ||||| | ||||||||||||||||||||||||| | ||||||| ||| |||||  | |    
T  28404084 aatgttccgcaaatcgagtgttaactcttcgaatttactgagtttacatttttaggtaccaaaatcgtgttaacttgaaggtaaattcggtttctaataa 28403985  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttact 363  Q
    ||||| || ||||||||| ||||||||||||||||||| |||||||| |||||| ||| |||||||||||    
T  28403984 aatcgaaatgtttgacgaatttgaccgagttaacactcggtaaactcatgtaaactcgaccgagtttact 28403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 194 - 363
Target Start/End: Complemental strand, 32760228 - 32760068
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||||||| ||||||||         || |||||||||||||||||||||||||| |||||||||||| ||||| || |    
T  32760228 aatgttccgcaaatcgagtgttaacactctgagtttac---------gtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctagtaa 32760138  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttact 363  Q
    |||||| | | || ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||    
T  32760137 aatcgggaggcttaacgagtttgaccgagttaacactcactaaactcgtgtaaactcgatcgagtttact 32760068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 6312986 - 6313138
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  6312986 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 6313085  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  6313086 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 6313138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 8141021 - 8140869
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||| | | ||||||| ||||||||| |||||||||||||||| |||||||| |||||||||||| |    
T  8141021 aatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggtaa 8140922  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||  ||| |||| | ||||||||| |||||||||||| ||||||| ||||||    
T  8140921 aattagaaggtttaatgagtttgactgagttaacactcggtaaacttgtgtaa 8140869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 25612502 - 25612654
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  25612502 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 25612601  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  25612602 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 25612654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 29396222 - 29396070
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  29396222 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 29396123  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  29396122 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 29396070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 324
Target Start/End: Complemental strand, 49237104 - 49236974
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||||||||||||||||||||| ||| |||||||| | | |||| ||||||||||||||||| |||||||| |||||| ||| |||| |||||||| |    
T  49237104 aatgttccgtaaatcgagtgttaatacttcgagtttatcgagtttatgtgtttaggtaccaaaaccgtgttaattcggagttaagctcggtttctggtaa 49237005  T
Q  294 aatcggaaagtttgacgagtttgaccgagtt 324  Q
    ||||| || ||||||||||||||||||||||    
T  49237004 aatcgaaaggtttgacgagtttgaccgagtt 49236974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 25831037 - 25830885
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| ||| |||| ||| || ||  | |    
T  25831037 aatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaatcggttcctaataa 25830938  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  25830937 aattggaaggtttaacgagtttgactgagttaacactcagtaaactcgtgtaa 25830885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 38535934 - 38535772
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||| ||||| |||| || ||||| | ||||||| ||||| ||| ||||| |||||||||| |||||||||| | |||||||| |    
T  38535934 aatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggtaa 38535835  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    ||||||||   || ||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  38535834 aatcggaagacttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 38535772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 38558152 - 38557990
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||| ||||| |||| || ||||| | ||||||| ||||| ||| ||||| |||||||||| |||||||||| | |||||||| |    
T  38558152 aatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggtaa 38558053  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    ||||||||   || ||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  38558052 aatcggaagacttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 38557990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 363
Target Start/End: Complemental strand, 42304586 - 42304469
Alignment:
Q  246 taggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgta 345  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||| |||| |||| |||| |||||||||||||||||||||||  |||||||||||||    
T  42304586 taggtgccaaaatcatgttaattcggaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgaccgagttaacactaggtaaactcgtgta 42304487  T
Q  346 aaatcggccgagtttact 363  Q
    || ||| |||||||||||    
T  42304486 aactcgaccgagtttact 42304469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 196 - 328
Target Start/End: Original strand, 15927284 - 15927416
Alignment:
Q  196 tgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaa 295  Q
    |||| ||||||||||||||||| |||  ||||||| | | |||| ||||||| |||||||||| |||||||||| |||||||| ||| |||||| | |||    
T  15927284 tgtttcgtaaatcgagtgttaatactttgagtttatcgagtttaagtgtttaagtaccaaaattgtgttaactctgaggtaaattcggtttctgataaaa 15927383  T
Q  296 tcggaaagtttgacgagtttgaccgagttaaca 328  Q
    ||||||||||||||||||||||| |||||||||    
T  15927384 tcggaaagtttgacgagtttgactgagttaaca 15927416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 25253477 - 25253644
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||||| |||||||||||||||  ||| ||||||||| | |||| || |||||||||||||||||||||||  | |||||||| ||| |||||||| |    
T  25253477 aatgttcc-taaatcgagtgttaattctctgagtttaccgagtttatgtttttaggtaccaaaatcgtgttaatactgaggtaaattcggtttctggtaa 25253575  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    | ||||||  ||||||||||||||| ||||||||| || |||||||| |||||| |||  |||||||||    
T  25253576 actcggaagatttgacgagtttgactgagttaacattcggtaaactcttgtaaactcgatcgagtttac 25253644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 7798525 - 7798618
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  7798525 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 7798618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 48177231 - 48177078
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgattt-ctggtg 292  Q
    |||||| || ||||||||| ||||| ||| ||| ||||  | ||||||| ||||||||  |||||||||||||||| |||||||| ||| ||| |||||     
T  48177231 aatgtttcgcaaatcgagtattaactctctgagattactgagtttacgtttttaggtagaaaaatcgtgttaactctgaggtaaaatcggttttctggta 48177132  T
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||| |||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  48177131 aaattggaaggtttaacgagtttgactgagttaacactcagtaaactcgtgtaa 48177078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 51702005 - 51702157
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| ||||| |||||||||| |||||||| ||| |||||||| |    
T  51702005 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaaatcggtttctggtaa 51702104  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||   || |||| ||||||||||| |||||||||||| ||||||||||||||    
T  51702105 aattaaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 51702157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 329
Target Start/End: Complemental strand, 33886953 - 33886863
Alignment:
Q  239 acgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||| |||||||  ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  33886953 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 33886863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 239 - 329
Target Start/End: Original strand, 33957297 - 33957387
Alignment:
Q  239 acgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||| |||||||  ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||    
T  33957297 acgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 33957387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 194 - 327
Target Start/End: Complemental strand, 49971734 - 49971599
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||| |||||||   | ||||||||| | ||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| |    
T  49971734 aatgttccacaaatcgaatgttaacttactgagtttaccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgttttctggtaa 49971635  T
Q  294 aatcggaaagt-ttgacgagtttgac-cgagttaac 327  Q
    ||||| || || |||||||||||||| |||||||||    
T  49971634 aatcgaaatgtgttgacgagtttgactcgagttaac 49971599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 18798912 - 18799014
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 343  Q
    ||||||||| |||||||||||||||| |||||||| ||| |||||||| |||| |||| |||| ||||| ||||| |||||||||||| |||||||||||    
T  18798912 tttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagattgactgagttaacactcggtaaactcgtg 18799011  T
Q  344 taa 346  Q
    |||    
T  18799012 taa 18799014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 34019168 - 34019237
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  34019168 gtgttaactcggaggtaaattcgatttttggtgaaatcggaaagtttgacgaggttgaccgagttaacac 34019237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 34751651 - 34751575
Alignment:
Q  253 caaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||| | |||||||||||||||||||    
T  34751651 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgccaagtttgaccgagttaacac 34751575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 49231467 - 49231579
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 343  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||  |||||||| |||| |||||||||||  |||||||| || ||||||| |||    
T  49231467 tttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtataatcggaaggtttaacgagtttgactaagttaacaatcggtaaacttgtg 49231566  T
Q  344 taaaatcggccga 356  Q
    |||| ||| ||||    
T  49231567 taaactcgaccga 49231579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 327
Target Start/End: Original strand, 52182319 - 52182443
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||||||||||||| | ||||||||| | | ||||||| |||||||||  ||||||||| || ||||||||||| |||||||||||| |||||| || |    
T  52182319 aaatcgagtgttaactcgccgagtttatcgagtttacgtttttaggtactgaaatcgtgtcaattcggaggtaaattcgatttctggtaaaatcgaaatg 52182418  T
Q  304 tttgacgagtttgac-cgagttaac 327  Q
    ||||||||||| ||| |||||||||    
T  52182419 tttgacgagttcgactcgagttaac 52182443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 1108377 - 1108468
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaac 327  Q
    ||||||| |||||||   |||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||    
T  1108377 tttacgtttttaggtggtaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgactgagttaac 1108468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 309
Target Start/End: Complemental strand, 9322296 - 9322181
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  9322296 aatgttccgtaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 9322197  T
Q  294 aatcggaaagtttgac 309  Q
    ||| |||| |||||||    
T  9322196 aattggaaggtttgac 9322181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 27257987 - 27257872
Alignment:
Q  203 taaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaa 302  Q
    |||||| ||||||||| | |||||||||   | ||||||| |||||||||||||||||||| ||||| |||||||||| |||||  ||| |||||||||     
T  27257987 taaatctagtgttaactcgccgagtttaatgaatttacgtttttaggtaccaaaatcgtgtcaactccgaggtaaacttgattttcggtaaaatcggaat 27257888  T
Q  303 gtttgacgagtttgac 318  Q
    ||||||||||||||||    
T  27257887 gtttgacgagtttgac 27257872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 33086881 - 33087034
Alignment:
Q  39 tattacttgagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttatataggctctaaaagagagttctagacac 138  Q
    |||||||| ||| |||| ||| |||||| ||| |||||||||||||||||||||||| |   |||||||||||  |||||      |||| |||||||||    
T  33086881 tattactttagatgatattttcattcttatttgcttgcttggtttacaaatgacaagatataccctttttata--ggctcacgggtagagctctagacac 33086978  T
Q  139 atcatatgataactttctacacacttcaagagagagttctatacacttctctcaaaa 195  Q
    ||||||  |||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  33086979 atcataaaataactttctacacactt-aagagaaagttctacacacttctctcaaaa 33087034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 42 - 165
Target Start/End: Original strand, 36815488 - 36815608
Alignment:
Q  42 tacttgagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttatataggctctaaaagagagttctagacacatc 141  Q
    ||||||| | ||||||||||||||||||| |||||||||||| ||||||| ||| || ||||||||||||  || |  ||  ||||||||||||||||||    
T  36815488 tacttgaaatgatactttgattcttgtttgcttgcttggtttccaaatgataagatctcccctttttata--ggttgcaagggagagttctagacacatc 36815585  T
Q  142 atatgataactttctacacacttc 165  Q
    ||| || |||||||||||||||||    
T  36815586 atagga-aactttctacacacttc 36815608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 323
Target Start/End: Original strand, 3593238 - 3593358
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| |||||||||||   |||||       |||||| |||||||||||||||||||||||||| |||||||||  | |    
T  3593238 aatgttccgcaaatcgagtgttaactctccgagtttat--atttt-------taggtatcaaaatcgtgttaactcggaggtaaattcgatttctaataa 3593328  T
Q  294 aatcggaaagtttgacgagtttgaccgagt 323  Q
    |||||||| ||||||| ||||| |||||||    
T  3593329 aatcggaaggtttgacaagtttaaccgagt 3593358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Original strand, 18954490 - 18954563
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgac 309  Q
    ||||||| |||||||  ||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  18954490 tttacgtttttaggtggcaaaaacgtgttaactcggacgtaaactcggtttttggtgaaatcggaaagtttgac 18954563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 346
Target Start/End: Original strand, 29219611 - 29219683
Alignment:
Q  274 gtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||||| ||| ||||||||||||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  29219611 gtaaaatcggtttctggtgaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 29219683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 4150748 - 4150861
Alignment:
Q  69 tttcttgcttggtttacaaatgacaagttcacccctttttatataggctctaaaagagagttctagacacatcatatgataactttctacacacttcaag 168  Q
    ||||||||||||||||||||||||||  || ||||||||  ||||||||||||   |||| ||||||||||| | |  ||||  ||||||||||||||||    
T  4150748 tttcttgcttggtttacaaatgacaaaatctcccctttt--tataggctctaaggaagagatctagacacattaca-aataagattctacacacttcaag 4150844  T
Q  169 agagagttctatacact 185  Q
    | ||||||||| |||||    
T  4150845 aaagagttctacacact 4150861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 331
Target Start/End: Original strand, 51901945 - 51902072
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||||||||||||  ||| |||| || ||| |||| || ||||| |||| |||||||||||||| |  | ||||||  ||||||| | |||||  ||||    
T  51901945 aaatcgagtgttaattctctgagtctatcaagtttatgtttttagataccgaaatcgtgttaacttgatgctaaacttcatttctgataaaatccaaaag 51902044  T
Q  304 tttgacgagtttgaccgagttaacactc 331  Q
    ||| || |||||||| ||||||||||||    
T  51902045 tttaacaagtttgactgagttaacactc 51902072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 21248571 - 21248490
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttga 317  Q
    ||||||| |||||||  |||||||||||||||| ||| ||||| | | ||| || |||||| |||| |||||||||||||||    
T  21248571 tttacgtttttaggtgtcaaaatcgtgttaacttggaagtaaaatggttttttgttgaaattggaatgtttgacgagtttga 21248490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 28387144 - 28387091
Alignment:
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||| |||| |||| | ||||||||| |||||||||||| ||||||||||||||    
T  28387144 aaattggaatgtttaatgagtttgactgagttaacactcggtaaactcgtgtaa 28387091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 7e-65; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 194 - 335
Target Start/End: Original strand, 15224192 - 15224333
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15224192 aatgttccgcaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcagaggtaaactcgatttctggtga 15224291  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  15224292 aatcgaaaagtttgacgagtttgaccgaattaacactcagta 15224333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 18900067 - 18899899
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| |||||||||||||||||||||||||||||| || |    
T  18900067 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 18899968  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  18899967 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 18899899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 40829596 - 40829766
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgag--tttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt 291  Q
    |||||||||||||| |||||||||| |||||||  |||||| | | ||| | |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  40829596 aatgttccgtaaattgagtgttaactctccgagagtttaccgagtctacatttttaggtatcaaaatcgtgttaactcggaggtaaactcggtttctggt 40829695  T
Q  292 gaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
     |||| | || ||||||||| |||||||||||||||||||| ||||||| |||||| ||| ||||||||||    
T  40829696 aaaatagaaaggtttgacgaatttgaccgagttaacactcaataaactcatgtaaactcgaccgagtttac 40829766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 28740085 - 28739933
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | |||| || ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  28740085 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 28739986  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  28739985 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 28739933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 10657841 - 10657993
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||| ||| ||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||| ||||||| |||| |    
T  10657841 aatgttccgtaaatcgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggtaa 10657940  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| |||||||| || ||||||||||||  |||||||||||||    
T  10657941 aattggaaggtttaacgagtttaactgagttaacactcgataaactcgtgtaa 10657993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 18177682 - 18177834
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||  || |||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  18177682 aatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 18177781  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||    
T  18177782 aattggaaagtttaacgagtttgacagagttaacactcggtaaactcgtgtaa 18177834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 194 - 360
Target Start/End: Complemental strand, 2308853 - 2308687
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||| | |||||||||||||||| | |||||||||  || ||||||| |||| |||||||||||||||||||||||||||||| ||| ||| |||| |    
T  2308853 aatgtttcataaatcgagtgttaactcgccgagtttattaaatttacgtttttatgtaccaaaatcgtgttaactcggaggtaaattcggtttgtggtaa 2308754  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttt 360  Q
    ||||  |||||||||| ||||||||| ||||||||||| ||||| ||||||||| |||  |||||||    
T  2308753 aatcaaaaagtttgacaagtttgaccaagttaacactcggtaaaatcgtgtaaactcgatcgagttt 2308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 6224368 - 6224206
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||| | | ||||||| |||||||||  |||||||||||||||  |||| |||||| ||||| || |    
T  6224368 aatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacacaaatcgtgttaactcttaggtgaactcggtttctagtaa 6224269  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||| |||||| ||| ||||    
T  6224268 aatcggaaggtttaacgagtttgactgagttaacactcggtaaactcatgtaaactcgaccga 6224206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 347
Target Start/End: Complemental strand, 31847358 - 31847204
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaa-ttttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 292  Q
    ||||||||  ||||||||||||||| ||||||||||| | | |||||||| ||||||||  |||||| || |||||||||||||||||| ||||||| |     
T  31847358 aatgttcctcaaatcgagtgttaactctccgagtttatcgagttttacgtttttaggtattaaaatcatggtaactcggaggtaaactctatttctgata 31847259  T
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    ||||| ||| |||||||||||| |||||| ||||||||| |||||||||||||||    
T  31847258 aaatcagaaggtttgacgagttcgaccgaattaacactcggtaaactcgtgtaaa 31847204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 7027314 - 7027466
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  7027314 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 7027413  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| | || |||| ||||||||||| |||||||||||| ||||||||||||||    
T  7027414 aattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 7027466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 28844996 - 28845148
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||| |||| ||||||||||||||| ||||||| ||| | | |||| || ||||||||| |||||||||||||||| |||||||| ||| |||||| | |    
T  28844996 aatgatccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataa 28845095  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  28845096 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 28845148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 25288574 - 25288736
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||| | ||||| ||||||| ||||| | ||||| | ||||||||| |||||||||||||||| |||||||||||| ||||| || |    
T  25288574 aatgttccgcaaatcgaatattaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaa 25288673  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| ||| ||||||  ||||||||||||  |||||||||||||| ||| ||||    
T  25288674 aatcggaaggtttaacgggtttgattgagttaacactcgataaactcgtgtaaactcgaccga 25288736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 13898480 - 13898573
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| ||||||   ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13898480 tttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 13898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 14039097 - 14039190
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| ||||||   ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14039097 tttacgtttttaggcggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 14039190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 243 - 360
Target Start/End: Complemental strand, 18727737 - 18727620
Alignment:
Q  243 gtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgt 342  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||| |||||  |||||||||||||||| |||||||||||| ||  |||||||||    
T  18727737 gtttgggtaccaaaaccgtgttaactcggaggtaaactcgaattctggtaaaatcaaaaagtttgacgagtttcaccgagttaacattcgataaactcgt 18727638  T
Q  343 gtaaaatcggccgagttt 360  Q
    ||||| ||| ||||||||    
T  18727637 gtaaactcgaccgagttt 18727620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 33136029 - 33136189
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||| |||   ||| | |||| || ||||||||| |||||||||||||||| |||||||||||||||||||||      
T  33136029 aatgttccgcaaatcgagtgttaactctctgaga--accgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtat 33136126  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| |||| ||||||  ||||||||||| ||||||| ||||||| ||| ||||    
T  33136127 aatcggaaggtttaacgaatttgactaagttaacactcggtaaacttgtgtaaactcgaccga 33136189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 340
Target Start/End: Original strand, 379341 - 379487
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||  ||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||| ||| ||| || | |    
T  379341 aatgttccgcaaatcgagtgttaactctttgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttttgataa 379440  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 340  Q
    |||||||| | || ||||||||||| |||||||||||| ||||||||    
T  379441 aatcggaaggcttaacgagtttgactgagttaacactcggtaaactc 379487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 3991777 - 3991870
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  3991777 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 3991870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 194 - 347
Target Start/End: Complemental strand, 13833210 - 13833057
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| || ||||||| || |||| ||| | | ||||||| ||||||||| |||||||||||||||| ||||||||||| |||||| || |    
T  13833210 aatgttccgcaaattgaatgttaactcttcgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcaatttctagtaa 13833111  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||| |||  ||| || |||||||| |||||||||||| |||||||||||||||    
T  13833110 aatcagaagatttaacaagtttgactgagttaacactcggtaaactcgtgtaaa 13833057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 341
Target Start/End: Complemental strand, 35404416 - 35404311
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| |||||||||| ||||||||||||||  |||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||  ||    
T  35404416 tttacgtttttaggtaccgaaatcgtgttaacttagaggtaaactcggtttttggtaaaattggaaagtttgacgagtttgaccgagttaacactcgata 35404317  T
Q  336 aactcg 341  Q
    ||||||    
T  35404316 aactcg 35404311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 38413551 - 38413458
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38413551 tttacgtttttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 38413458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 19948550 - 19948635
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||  ||||| |||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||    
T  19948550 tttaggtggcaaaaacgtgttaactcggaggtaaactcagtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 19948635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 26789196 - 26789348
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||| | ||||||||||||||  ||||||| ||| | | || || | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  26789196 aatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 26789295  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||   |||||||||||||    
T  26789296 aattggaaggtttaacgagtttgactgagttaacacttgataaactcgtgtaa 26789348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 194 - 341
Target Start/End: Original strand, 34342200 - 34342347
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||| ||||||||| | ||||||| |||||||||||||  | ||||| | |  ||||||||||| |||||||| |    
T  34342200 aatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacgtttttaggtaccaaatccatgttagcactaaggtaaactcggtttctggtaa 34342299  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    | |||||| |||||||||||| ||  ||||||||| || |||||||||    
T  34342300 actcggaaggtttgacgagttagattgagttaacagtcggtaaactcg 34342347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 362
Target Start/End: Original strand, 41978841 - 41978976
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaac-------- 327  Q
    ||||||| |||||||  ||||| | |||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||            
T  41978841 tttacgtttttaggtggcaaaaacatgttaattcggaggtaaactcggtttttgatgaaatcggaaagtttgacgagtttgaccgagttaacacgtgtta 41978940  T
Q  328 -actcagtaaactcgtgtaaaatcggccgagtttac 362  Q
     |||||||||||||||||||| ||| ||||||||||    
T  41978941 aactcagtaaactcgtgtaaactcgtccgagtttac 41978976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 236 - 346
Target Start/End: Original strand, 3575294 - 3575404
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| ||||||||| |||||| ||||||||| |||||||| ||| |||||||| |||| |||| |||| ||||||||||| |||||||||||| |||    
T  3575294 tttacgtttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggta 3575393  T
Q  336 aactcgtgtaa 346  Q
    |||||| ||||    
T  3575394 aactcgcgtaa 3575404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 245 - 347
Target Start/End: Complemental strand, 38295806 - 38295704
Alignment:
Q  245 ttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgt 344  Q
    ||||||| |||||| ||||||| ||||||| ||| | | |||||||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  38295806 ttaggtatcaaaattgtgttaattcggaggaaaatttggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgt 38295707  T
Q  345 aaa 347  Q
    |||    
T  38295706 aaa 38295704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 33262857 - 33262950
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||    
T  33262857 tttacgtttttaggtggcaaaaacgtgtaaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgactgagttaacac 33262950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 15926382 - 15926474
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||||| ||| |||||||||||||||| ||||||||||| ||||||||||||||| |||||| || |||||||||||||||| |||||||||    
T  15926382 tttacgttttttggtaccaaaatcgtgtcaactcggaggttaactcgatttctggtaaaatcgcaatgtttgacgagtttgactcgagttaac 15926474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 193 - 363
Target Start/End: Complemental strand, 43305112 - 43304942
Alignment:
Q  193 aaatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtt-taggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt 291  Q
    |||||||||  ||||||||||||||  |  |||||||||| | ||| ||| || |||||| |||| | ||||||||||| |||||||||||||| || ||    
T  43305112 aaatgttccacaaatcgagtgttaattcgtcgagtttaccgagttttcgttttataggtatcaaactagtgttaactcg-aggtaaactcgattactagt 43305014  T
Q  292 gaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttact 363  Q
    ||||| |||||||||||||| |||||| |||||||||| ||  ||| | ||||||| || ||||||||||||    
T  43305013 gaaataggaaagtttgacgactttgactgagttaacacccataaaatttgtgtaaagtcagccgagtttact 43304942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 11153447 - 11153354
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| ||||||| |  |||||||||||||||||||||||||||| |||||||| ||||||  | ||||| |||||||||||||||||||||    
T  11153447 tttacgtttttaggtgctgaaatcgtgttaactcggaggtaaactcggtttctggtaaaatcgagatgtttggcgagtttgaccgagttaacac 11153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 45161206 - 45161137
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  45161206 gtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagttcgaccgagttaacac 45161137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 215048 - 214945
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| ||||||||||  |||||| ||||| | ||||||| ||||||||||||||||||||||||||  ||||||||||  |||||||| |    
T  215048 aatgttccgcaaattgagtgttaactttccgagattaccgaatttacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcagtttctggtaa 214949  T
Q  294 aatc 297  Q
    ||||    
T  214948 aatc 214945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 43825317 - 43825403
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||||||||| |||||||| ||| |||||||| |||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  43825317 gtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 43825403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 362
Target Start/End: Original strand, 12877690 - 12877816
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttga-cgagtttgaccgagttaacactcagt 334  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||| || |||||||||||||||||| ||||||     | ||||| |||| ||    
T  12877690 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttgatgaaatcggaaagtttgaccgagttaacatgtgttaa-actcggt 12877788  T
Q  335 aaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||| ||| ||||||||||    
T  12877789 aaactcgtgtaaactcgtccgagtttac 12877816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 203 - 327
Target Start/End: Complemental strand, 3858552 - 3858427
Alignment:
Q  203 taaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaa 302  Q
    ||||| |||||||||| | ||||||| ||| | ||||||| |||| ||  |||||| |||| |||| | ||||||||||||||| |||| |||||||||     
T  3858552 taaattgagtgttaactcgccgagttaaccgaatttacgtttttaagtgtcaaaattgtgtcaacttgaaggtaaactcgatttttggtaaaatcggaat 3858453  T
Q  303 gtttgacgagtttgac-cgagttaac 327  Q
    ||||||||||||| || |||||||||    
T  3858452 gtttgacgagtttaactcgagttaac 3858427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 32293928 - 32294008
Alignment:
Q  248 ggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||||||||||||||||| || || ||||||| ||||||| || ||||||||| |||||||||||||||| |||||||||    
T  32293928 ggtaccaaaatcgtgttaaatctgatgtaaactggatttcttgtaaaatcggaatgtttgacgagtttgactcgagttaac 32294008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 356
Target Start/End: Original strand, 43078967 - 43079063
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||||| |||||||||||| |||||| | ||||| ||| |||| ||||||||||  ||||||||||||  |||||||||||||| ||| ||||    
T  43078967 gtgttaactctgaggtaaactcggtttctgttaaaatccgaaggtttaacgagtttgattgagttaacactcgataaactcgtgtaaactcgaccga 43079063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 32242289 - 32242211
Alignment:
Q  250 taccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    |||||||||||||||||||| |||||||||| ||||||| || ||||| ||| |||| ||||||||||| |||||||||    
T  32242289 taccaaaatcgtgttaactctgaggtaaacttgatttcttgtaaaatcagaatgtttaacgagtttgactcgagttaac 32242211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 37810979 - 37810895
Alignment:
Q  237 ttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccga 321  Q
    |||||| ||||| | |||||| |||||||| ||||||||||||| ||||| ||||||||||  || |||||| ||||||||||||    
T  37810979 ttacgtttttagatgccaaaaacgtgttaaatcggaggtaaacttgatttttggtgaaatcataatgtttgatgagtttgaccga 37810895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 328
Target Start/End: Complemental strand, 43318817 - 43318766
Alignment:
Q  277 aactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaaca 328  Q
    ||||| |||| |||| ||||||||||||||||||||||||||||||||||||    
T  43318817 aactctatttttggtaaaatcggaaagtttgacgagtttgaccgagttaaca 43318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 30850272 - 30850364
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| ||||||| |||||||||| | |||||||||||||| ||| ||| |||| |||||  |||| |||||  ||||||||||||||||||    
T  30850272 tttacgtttttaggtgccaaaatcgtataaactcggaggtaaattcgttttttggtaaaatcataaag-ttgaccggtttgaccgagttaacac 30850364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 326
Target Start/End: Complemental strand, 1833803 - 1833712
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaa 326  Q
    ||||||| |||||||| ||||||||||| || | ||||||||| |||||||||||| ||||  ||| ||||  |||||||||| ||||||||    
T  1833803 tttacgtttttaggtaacaaaatcgtgtcaatttggaggtaaattcgatttctggtaaaataagaatgtttatcgagtttgactcgagttaa 1833712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 346
Target Start/End: Original strand, 3464112 - 3464165
Alignment:
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||| |||| |||| | ||||||||| |||||||||||||||||||||||||||    
T  3464112 aaattggaaggtttaatgagtttgactgagttaacactcagtaaactcgtgtaa 3464165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 12768420 - 12768344
Alignment:
Q  15 aatacttgagagaagaactatttctattacttgagaggatactttgattcttgttttcttgcttggtttacaaatga 91  Q
    |||| |||||||||| |  ||||||||||||| |||||||| ||||||| |  ||| ||||||| ||||||| ||||    
T  12768420 aatatttgagagaaggaaaatttctattacttaagaggatattttgattttaatttacttgcttagtttacatatga 12768344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 3e-64; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 23671515 - 23671347
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||| ||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23671515 aatgttccgcaaatcgagtgttagcactctgagtttaccggttttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 23671416  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||| |||||||||||||||||| | |||||| |||||||||||||||||||||| |||| |||||||    
T  23671415 aatcgaaaagtttgacgagtttgagcaagttaagactcagtaaactcgtgtaaaattggccaagtttac 23671347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 223 - 366
Target Start/End: Original strand, 8084200 - 8084343
Alignment:
Q  223 cgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgag 322  Q
    |||||||||| | ||||||||||||||| | |||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  8084200 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgag 8084299  T
Q  323 ttaacactcagtaaactcgtgtaaaatcggccgagtttactcct 366  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  8084300 ttaacactcagtaaactcgtgtgaaatcgggcgagtttactcct 8084343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 223 - 362
Target Start/End: Original strand, 29469154 - 29469293
Alignment:
Q  223 cgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgag 322  Q
    |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29469154 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgag 29469253  T
Q  323 ttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  29469254 ttaacactcagtaaactcgtgtgaaatcgggcgagtttac 29469293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 194 - 340
Target Start/End: Complemental strand, 29510207 - 29510061
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||||||| | | |||||||||||||||| ||||||||||||||||| || |||||||| ||||||||| |    
T  29510207 aatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtgtttaggtatcaaaatcgtgttaactctgatgtaaactcaatttctggtaa 29510108  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactc 340  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  29510107 aatcagaaggtttgacgagtttgaccgagttaacactcggtaaactc 29510061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 194 - 347
Target Start/End: Complemental strand, 49501323 - 49501170
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||| | ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||| |    
T  49501323 aatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaa 49501224  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||||||||||    
T  49501223 aatcggaaggtttaacgagtttgacggagttaacactcggtaaactcgtgtaaa 49501170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 194 - 347
Target Start/End: Complemental strand, 49507388 - 49507235
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||| | ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||| |    
T  49507388 aatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaa 49507289  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||||||||||    
T  49507288 aatcggaaggtttaacgagtttgacggagttaacactcggtaaactcgtgtaaa 49507235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 50517164 - 50517323
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||  ||||||||||||||||||||| |    
T  50517164 aatgttccgcaaatcgagtgttaactctccgagttta---------cgtgtttaggtaccaaaatcgtgttaactttgaggtaaactcgatttctggtaa 50517254  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||| |||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| |||||    
T  50517255 aattggaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgattttac 50517323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 29855927 - 29856089
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||||| |||||||||| ||||  ||||||| ||||| | ||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||| |    
T  29855927 aatgttccataaatcgagtattaattctccgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaa 29856026  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  29856027 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 29856089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 204 - 341
Target Start/End: Original strand, 41725534 - 41725671
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||||||||||||| ||||| | ||||| | ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| |    
T  41725534 aaatcgagtgttaactctccgtgattacctagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaagg 41725633  T
Q  304 tttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||| ||||||||||| |||||||||||| |||||||||    
T  41725634 tttaacgagtttgactgagttaacactcggtaaactcg 41725671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 52 - 179
Target Start/End: Original strand, 4892191 - 4892316
Alignment:
Q  52 gatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttatataggctctaaaagagagttctagacacatcatatgataac 151  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||| || ||||||||||||  ||||||||  ||||||||||||||||||||||||||||    
T  4892191 gatactttgattcttgtttgcttacttgatttacaaatgacaagctctcccctttttata--ggctctaagggagagttctagacacatcatatgataac 4892288  T
Q  152 tttctacacacttcaagagagagttcta 179  Q
    ||||||||||||||||||||| ||||||    
T  4892289 tttctacacacttcaagagagtgttcta 4892316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 49834624 - 49834462
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||||||||||| |||||||||| |||  || ||||| | ||||||| ||||| ||| |||||||||||||||| |||||||||||| |||||||| |    
T  49834624 aatgttccgtaaattgagtgttaactctctaagattaccgagtttacgtttttagctacaaaaatcgtgttaactctgaggtaaactcggtttctggtaa 49834525  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| ||||||||||| ||||||| |||| ||||||||||||||| ||| ||||    
T  49834524 aatcggaaggtttaacgagtttgactgagttaatactcggtaaactcgtgtaaactcgaccga 49834462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 32322477 - 32322631
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| || |||||||||||| ||||||| ||||| | ||||||| ||||||||| ||||||||||||| || |||||||||||| |||||||| |    
T  32322477 aatgttccgcaagtcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcggtttctggtaa 32322576  T
Q  294 aatcggaaagtttgacgagtttgaccgag-ttaacactcagtaaactcgtgtaaa 347  Q
    |||||||| | || ||||||||||| ||| ||||||||| |||||||||||||||    
T  32322577 aatcggaaggcttaacgagtttgactgagtttaacactcggtaaactcgtgtaaa 32322631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 236 - 362
Target Start/End: Complemental strand, 42937510 - 42937384
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| ||||||| | |||| ||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||    
T  42937510 tttacgtatttaggtgctaaaagcgttttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactccgta 42937411  T
Q  336 aactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||| ||||  | |||||||||    
T  42937410 aactcgtgtgaaattaggcgagtttac 42937384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 34 - 193
Target Start/End: Original strand, 4872352 - 4872510
Alignment:
Q  34 atttctattactt-gagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttatataggctctaaaagagagttct 132  Q
    |||| |||||||| |||| |||||||||||||||| || ||| |||| ||||||||||||||| || ||||||||||||  ||||| ||  |||||||||    
T  4872352 atttttattacttagagatgatactttgattcttgattgcttacttgatttacaaatgacaagctctcccctttttata--ggctccaagggagagttct 4872449  T
Q  133 agacacatcatatgataactttctacacacttcaagagagagttctatacacttctctcaa 193  Q
    | |||||||||||||||||||||||||| ||||||||||| |||||| |||| ||||||||    
T  4872450 aaacacatcatatgataactttctacactcttcaagagagtgttctacacacctctctcaa 4872510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 5441813 - 5441965
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||| ||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  5441813 aatgttccgtaaatcgaatgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 5441912  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  5441913 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 5441965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 30967133 - 30966981
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| ||| |||| | | |||||||| |    
T  30967133 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaattggtttctggtaa 30967034  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| |||||||||||  ||||||||||| ||||||||||||||    
T  30967033 aattggaaggtttaacgagtttgactaagttaacactcggtaaactcgtgtaa 30966981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 28484306 - 28484469
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaa-tcgtgttaactcggaggtaaactcgatttctggtg 292  Q
    ||||||||| |||| |||||||||| ||| ||| ||||| | ||||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||||     
T  28484306 aatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaagtcgtgttaactctgaggtaaactcggtttctggta 28484405  T
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||| |||| |||| ||||||||||| ||||||||||||  |||||||||||||| ||| ||||    
T  28484406 aaattggaaggtttaacgagtttgactgagttaacactcgataaactcgtgtaaactcgaccga 28484469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 198 - 327
Target Start/End: Original strand, 871776 - 871905
Alignment:
Q  198 ttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatc 297  Q
    |||| |||||||||||||||| |  |||||||||| | ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||    
T  871776 ttccataaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtaccaaa-tcgtgtcaactcggaggtaaactcgatttctggtaaaatc 871874  T
Q  298 ggaaagtttgacgagtttgac-cgagttaac 327  Q
    |||| |||||||||||||||| |||||||||    
T  871875 ggaatgtttgacgagtttgactcgagttaac 871905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 5800375 - 5800537
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  5800375 aatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttctggtaa 5800474  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
     ||| ||| |||| ||||||||||| ||||||||||||  |||||||||||||| ||| ||||    
T  5800475 catcagaaggtttaacgagtttgactgagttaacactcgataaactcgtgtaaactcgaccga 5800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 362
Target Start/End: Complemental strand, 24966618 - 24966492
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||| ||| |||| |||| |||| ||||| ||||||||||| ||||||||||  |||    
T  24966618 tttacgtgtttaggtaccaaaatcgtgttaactcggaagtaaattcggtttttggtaaaatgggaaggtttgccgagtttgaccaagttaacacttggta 24966519  T
Q  336 aactcgtgtaaaatcggccgagtttac 362  Q
    |||||||||||| ||| ||||||||||    
T  24966518 aactcgtgtaaactcgaccgagtttac 24966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 315
Target Start/End: Original strand, 32889858 - 32889979
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||||||||  || |||||||| ||||||||| |    
T  32889858 aatgttccgcaaatcgagtgttaactctccgaatttaccgagtttacgtgtttaggtaccaaaatcgtgttaactttgatgtaaactcaatttctggtaa 32889957  T
Q  294 aatcggaaagtttgacgagttt 315  Q
    |||| ||| |||||||||||||    
T  32889958 aatcagaaggtttgacgagttt 32889979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 23987608 - 23987759
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||| | ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||| | | |||||||| |    
T  23987608 aatgttccgcaaatcgagtgttacctctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaa-ttggtttctggtaa 23987706  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||  ||||||||||||||    
T  23987707 aattggaaggtttaacgagtttgactgagttaacactaggtaaactcgtgtaa 23987759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 27768475 - 27768627
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  27768475 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 27768574  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| ||||||||| || ||||||||||||||    
T  27768575 aattggaaggtttaacgagtttgactgagttaacattcggtaaactcgtgtaa 27768627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 48261489 - 48261641
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | || || | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  48261489 aatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 48261588  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  48261589 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 48261641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 236 - 347
Target Start/End: Complemental strand, 26491222 - 26491111
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||||||||||||||||||||||||||| |  |||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||||| |  |||    
T  26491222 tttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaactcggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacatttggta 26491123  T
Q  336 aactcgtgtaaa 347  Q
    ||||||||||||    
T  26491122 aactcgtgtaaa 26491111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 6487417 - 6487324
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  6487417 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 6487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 46286680 - 46286824
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||||||||         || |||||||||||||||||||||||| |  ||||||||||||||||| || |    
T  46286680 aatgttccgcaaatcgagtgttaactctccgagtttac---------gtttttaggtaccaaaatcgtgttaacactaaggtaaactcgatttctagtaa 46286770  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    | |||||| |||||||||||||||||||||||||||||  ||||||| ||||||    
T  46286771 actcggaaggtttgacgagtttgaccgagttaacactcgataaactcttgtaaa 46286824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 37828220 - 37828068
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||| ||||||  ||||||| ||| | | ||||| | ||||| ||| |||||||||||||||| |||||||| ||| |||||||| |    
T  37828220 aatgttccgcaaatcgaatgttaaatctccgagattatcgagtttacatttttagatacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 37828121  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  37828120 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 37828068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 50018603 - 50018755
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||| | ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| |||||| ||||||||| |||||||| ||| |||||||| |    
T  50018603 aatgttctgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggtaa 50018702  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| | ||| ||||| |||||||||||| ||||||||||||||    
T  50018703 aattggaaggtttaaagagattgacagagttaacactcggtaaactcgtgtaa 50018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 51321267 - 51321419
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||  ||| | | ||||| | ||||||||| |||||||||||||||| || ||||| ||| |||||||| |    
T  51321267 aatgttccgcaaatcgagtgttaactctccgatattatcgagtttacatttttaggtacaaaaatcgtgttaactctgacgtaaaatcggtttctggtaa 51321366  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| || |||||||| |||||||||||| ||||||||||||||    
T  51321367 aattggaaggtttaaccagtttgactgagttaacactcggtaaactcgtgtaa 51321419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 33138771 - 33138877
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  33138771 aatgttccgcaaatcgagtgttaactctccgagttta---------cgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaa 33138861  T
Q  294 aatcggaaagtttgac 309  Q
    |||||||| |||||||    
T  33138862 aatcggaaggtttgac 33138877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 51967281 - 51967374
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  51967281 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 51967374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 9972785 - 9972870
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||  ||||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  9972785 tttaggtggcaaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 9972870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 352
Target Start/End: Complemental strand, 8563457 - 8563341
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| ||||| |  ||||| ||||||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||||||    ||    
T  8563457 tttacgtttttagatgacaaaaacgtgttaactcggagataaactcggtttttgatgaaatcggaaagtttgacgagtttgaccgagttaacacgtgtta 8563358  T
Q  336 aactcgtgtaaaatcgg 352  Q
    |||||||||||| ||||    
T  8563357 aactcgtgtaaactcgg 8563341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 194 - 336
Target Start/End: Original strand, 54341553 - 54341695
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||| ||||| |||||||| ||| |||||||| |    
T  54341553 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgtaaactctgaggtaaaatcggtttctggtaa 54341652  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaa 336  Q
    ||| | || |||| ||||||||||| |||||||||||| ||||    
T  54341653 aattgaaaggtttaacgagtttgactgagttaacactcggtaa 54341695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 194 - 342
Target Start/End: Complemental strand, 54853266 - 54853118
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| ||||||| ||||| | ||||| | |||| |||| ||||| |||||||||| |||||||| ||| ||||| || |    
T  54853266 aatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttatgtacaaaaattgtgttaactctgaggtaaaatcggtttctcgtaa 54853167  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgt 342  Q
    |||  ||| |||| ||||||||||  |||||||||||| ||||||||||    
T  54853166 aattagaaggtttaacgagtttgattgagttaacactcggtaaactcgt 54853118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 328
Target Start/End: Complemental strand, 56424074 - 56423982
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaaca 328  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||| | ||||||||||||||||||| |||||||||| ||||||||    
T  56424074 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttagtgaaatcggaaagtttgatgagtttgaccaagttaaca 56423982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 327
Target Start/End: Original strand, 55165487 - 55165621
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||||||| |||| |  |||||||||  | ||||||| |||| ||||||||||||| |||||| ||||||||||| ||||| |||| |    
T  55165487 aatgttccacaaatcgagtgctaactcgtcgagtttactgagtttacgtttttacgtaccaaaatcgtattaacttggaggtaaacttgatttatggtaa 55165586  T
Q  294 aatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    |||| ||| |||||||||||||||| |||||||||    
T  55165587 aatcagaatgtttgacgagtttgactcgagttaac 55165621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 26448643 - 26448728
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||  ||||| | ||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  26448643 tttaggtggcaaaaacatgtaaactcggaggtaaacttaatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 26448728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 40162793 - 40162886
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| ||||| || |||||| |||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  40162793 tttacgtttttaggtggcaaaaacgtgtaaattcggagataaactcggttttcggtgaaatcggaaagtttgacgagtttgaccgagttaacac 40162886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 54561231 - 54561316
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||  ||||| | ||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  54561231 tttaggtggcaaaaacatgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgtgtttgaccgagttaacac 54561316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 32683817 - 32683666
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| ||| ||| ||||| | || |||| ||||||||| ||||||||||||| |  |||||||  ||| |||||| | |    
T  32683817 aatgttccacaaatcgagtgttaactctcagagattaccgagtt-acgtttttaggtacaaaaatcgtgttaattatgaggtaagatcggtttctgttaa 32683719  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||  |||||||||||| ||||||||||||||    
T  32683718 aattggaaggtttaacgagtttgaatgagttaacactcggtaaactcgtgtaa 32683666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 277 - 356
Target Start/End: Original strand, 37916283 - 37916362
Alignment:
Q  277 aactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||| |||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  37916283 aactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcagtaaactcgtgtaaactcgaccga 37916362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 41470424 - 41470299
Alignment:
Q  237 ttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttga-cgagtttgaccgagttaacactcagta 335  Q
    |||||| |||||||  ||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||    || ||||| |||| |||    
T  41470424 ttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaattggaaagtttgaccgagttaacacgtgttaa-actcggta 41470326  T
Q  336 aactcgtgtaaaatcggccgagtttac 362  Q
    |||||||||||| ||| ||||||||||    
T  41470325 aactcgtgtaaactcgtccgagtttac 41470299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 328
Target Start/End: Complemental strand, 23170835 - 23170738
Alignment:
Q  231 ccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaaca 328  Q
    |||| ||||||| |||||||  |||||  ||||||| ||||||||||  ||| ||| ||||||||||| |||||||||||||||||||||||||||||    
T  23170835 ccaagtttacgtttttaggtggcaaaaatgtgttaattcggaggtaatttcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaaca 23170738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 14334398 - 14334491
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| ||||||||||||||||| || |||||||| ||||||| | ||| |||| |||||||||||||   | |||||||||||||||||||    
T  14334398 tttacgtttttaggtaccaaaatcgcgtaaactcggacgtaaacttgttttttggtaaaatcggaaagttgacctagtttgaccgagttaacac 14334491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 21486519 - 21486612
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| ||||| |||||| ||||||||||| ||| ||| |||||| ||||||||||||||||||||| || ||||||    
T  21486519 tttacgtttttaggtggcaaaaccgtgtaaactcgaaggtaaactcggtttttggagaaatcagaaagtttgacgagtttgacctaggtaacac 21486612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 29966455 - 29966401
Alignment:
Q  274 gtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaaca 328  Q
    ||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||    
T  29966455 gtaaactcggtttttggtgaaatcgaaaagttcgacgagtttgaccgagttaaca 29966401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 46863014 - 46862941
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgac 309  Q
    ||||||||||||||||| ||||| |||||||||  || ||||| |||||||||||| |||||| || |||||||    
T  46863014 tttacgtgtttaggtactaaaattgtgttaactatgaagtaaattcgatttctggtaaaatcgaaaggtttgac 46862941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 25013450 - 25013522
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttga 308  Q
    ||||||| |||||||  ||||| | ||||||||||||| ||||||| |||| |  ||||||||||||||||||    
T  25013450 tttacgtttttaggtggcaaaaacatgttaactcggagctaaactcaatttttaatgaaatcggaaagtttga 25013522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 21306394 - 21306311
Alignment:
Q  246 taggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||| |||||| ||||||||||| || |||||  ||| || | |||||||| ||||||||||||| ||||  |||||||||||    
T  21306394 taggtgccaaaaacgtgttaactcagaagtaaatccgagttttagtgaaatcagaaagtttgacgaatttggtcgagttaacac 21306311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 265 - 328
Target Start/End: Original strand, 22479852 - 22479915
Alignment:
Q  265 aactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaaca 328  Q
    |||||||| ||||| ||| ||| || ||||||||||| ||||||| ||||||| ||||||||||    
T  22479852 aactcggatgtaaaatcgttttttgttgaaatcggaatgtttgacaagtttgagcgagttaaca 22479915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 40487758 - 40487703
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt 291  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||| ||||    
T  40487758 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 40487703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 328
Target Start/End: Complemental strand, 25843058 - 25843004
Alignment:
Q  274 gtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaaca 328  Q
    ||||| ||| ||| |||||||||| |||||||||| ||| |||||||||||||||    
T  25843058 gtaaattcggtttatggtgaaatcagaaagtttgaagagattgaccgagttaaca 25843004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 305
Target Start/End: Complemental strand, 2326760 - 2326691
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtt 305  Q
    ||||||| |||||||||||||||||||| |||| ||| ||||||| | ||||| || |||| | ||||||    
T  2326760 tttacgtttttaggtaccaaaatcgtgtaaacttggatgtaaacttgttttctagtaaaattgaaaagtt 2326691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 24453923 - 24453976
Alignment:
Q  275 taaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||||||||||| ||| |||| |||| |||||||||||||||| |||||||||    
T  24453923 taaactcgatttccggtaaaattggaatgtttgacgagtttgactcgagttaac 24453976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 26955392 - 26955433
Alignment:
Q  288 tggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||| |||||| |||||||| |||||||||||||||||||||    
T  26955392 tggtaaaatcgaaaagtttgtcgagtttgaccgagttaacac 26955433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 29649696 - 29649643
Alignment:
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||| |||| |||| |||||||| || |||||||||||| ||||||||||||||    
T  29649696 aaattggaaggtttaacgagtttaactgagttaacactcggtaaactcgtgtaa 29649643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 271
Target Start/End: Original strand, 37916212 - 37916289
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcgg 271  Q
    ||||||||| |||| |||||||||| ||||||| ||| | | ||||| | |||| |||| ||||| ||||||||||||    
T  37916212 aatgttccgcaaattgagtgttaactctccgagattatcgagtttacatttttatgtacaaaaattgtgttaactcgg 37916289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 194 - 347
Target Start/End: Complemental strand, 1043 - 890
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  1043 aatgttccgcaaatcgagtgttaacactctgagtttaccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcggtttctggtaa 944  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  943 aatcggaaagtttgatgagtttgaccgagttaacacttagtaaactcgtgtaaa 890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 8029979 - 8029811
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||| || |||||||| | | |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |    
T  8029979 aatgttccgtaaatcgagtgttaactcttcgagtttatcgagtttacgtgtttaggtaccaaaatcgtgttaactctgagataaactcgatttctggtaa 8029880  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    |||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||||    
T  8029879 aatcggaaggtttgacgagtttgaccgagttaacactcggtaaaatcgtgtaaactcgaccgagtttac 8029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 19484177 - 19484345
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | |||| |||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  19484177 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttatgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 19484276  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  19484277 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 19484345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 178
Target Start/End: Original strand, 26946968 - 26947129
Alignment:
Q  15 aatacttgagagaagaactatttctattacttgagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttatatag 114  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||| || ||||||||  |||||    
T  26946968 aatatttgagagaagaactatttttattacttgagagaatactttgattcttgtttgcttgcttgatttactaatgacaagctctcccctttt--tatag 26947065  T
Q  115 gctctaaaagagagttctagacacatcatatgataactttctacacacttcaagagagagttct 178  Q
    |||| ||  ||||||||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  26947066 gctccaagggagagttctagacacatcatgggataactttctacacacttcaagagagtgttct 26947129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 10295129 - 10294982
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||| ||||||| ||||| | ||||||| ||||||||| | |||||||||||||| |||||||||||| |||||||| |    
T  10295129 aatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaacaatcgtgttaactctgaggtaaactcggtttctggtaa 10295030  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||||    
T  10295029 aatcggaaggtttaacgagtttgactgagttaacactcggtaaactcg 10294982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 31625719 - 31625872
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| ||||| |||||||||| |||||||||||| |||||||| |    
T  31625719 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggtaa 31625818  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||||||||||    
T  31625819 aatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaa 31625872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 9288284 - 9288132
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| || |||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  9288284 aatgttccgcaaatcgagtgttaactcttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 9288185  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||||||| |||| |||||    
T  9288184 aattggaaggtttaacgagtttgactgagttaacactcagtatactcatgtaa 9288132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 204 - 356
Target Start/End: Original strand, 26856526 - 26856678
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||||||||||||| ||||||| ||||| | |||| || | ||||||| |||||||||||||||| |||||||||||| |||||||| ||||| ||| |    
T  26856526 aaatcgagtgttaactctccgagattaccgagtttatgtttataggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcagaagg 26856625  T
Q  304 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    ||| ||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  26856626 tttaacgagtttgactgagttaacactcggtaaactcgtgtaaattcgaccga 26856678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 18305766 - 18305614
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||| || ||||||||||||||| ||||||| ||||| |  |||||| ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  18305766 aatgttacgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 18305667  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| | ||||||||| |||||||||||| ||||||||||||||    
T  18305666 aattggaaggtttaaagagtttgactgagttaacactcggtaaactcgtgtaa 18305614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 19717664 - 19717512
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  19717664 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 19717565  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||| ||||| |||||||||||| ||||||| ||||||    
T  19717564 aattggaaggtttaacgagattgactgagttaacactcggtaaacttgtgtaa 19717512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 12522647 - 12522528
Alignment:
Q  193 aaatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 292  Q
    |||||||||| ||||||||||||||| |||||||||||| || ||| | | |||||||||||||||||||||||||| |||||||||||| ||||||||     
T  12522647 aaatgttccgcaaatcgagtgttaactctccgagtttactaagtttgcatttttaggtaccaaaatcgtgttaactcagaggtaaactcggtttctggta 12522548  T
Q  293 aaatcggaaagtttgacgag 312  Q
    ||||||||| ||||||||||    
T  12522547 aaatcggaaggtttgacgag 12522528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 14781922 - 14781770
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | || || | ||||||||  |||||||||||||||| |||||||| ||| |||||||| |    
T  14781922 aatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 14781823  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  14781822 aattggaaggtttaacgagtttgactgagttaacactcagtaaactcgtgtaa 14781770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 18958517 - 18958365
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| |||||||||||||||| |||||||| | | |||||||| |    
T  18958517 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaattggtttctggtaa 18958418  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| || || ||||| |||||||||||| ||||||||||||||    
T  18958417 aattggaaggtttaacaagattgactgagttaacactcggtaaactcgtgtaa 18958365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 39467308 - 39467156
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| |||||   ||||||| ||||||||| |||||||| |||||||  ||||||| | |||||||||| |    
T  39467308 aatgttccgcaaatcgagtgttaactctccgagattaccgcgtttacgtttttaggtacaaaaatcgtattaactctaaggtaaaattgatttctggtaa 39467209  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| ||||  |||||||||| |||||||||||| ||||||||||||||    
T  39467208 aattggaaggtttagcgagtttgactgagttaacactcggtaaactcgtgtaa 39467156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 27878729 - 27878607
Alignment:
Q  238 tacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 337  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||| | |||||||||||||||  ||||||||||||  | ||    
T  27878729 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 27878630  T
Q  338 ctcgtgtaaaatcggccgagttt 360  Q
    |||||||||| ||| ||||||||    
T  27878629 ctcgtgtaaactcgaccgagttt 27878607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 238 - 360
Target Start/End: Complemental strand, 28018910 - 28018788
Alignment:
Q  238 tacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaa 337  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||| | |||||||||||||||  ||||||||||||  | ||    
T  28018910 tacgtgtttaggtaccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgacgagtttgatagagttaacactcgatgaa 28018811  T
Q  338 ctcgtgtaaaatcggccgagttt 360  Q
    |||||||||| ||| ||||||||    
T  28018810 ctcgtgtaaactcgaccgagttt 28018788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 194 - 327
Target Start/End: Complemental strand, 6388264 - 6388131
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| ||||| |||| | ||||||||| | | |||| || ||||||||||||||||||||||||||||||||||||||  ||| |||| |    
T  6388264 aatgttccgcaaattgagtggtaactcgccgagtttatcgaatttatgtttttaggtaccaaaatcgtgttaactcggaggtaaactctgtttatggtaa 6388165  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaac 327  Q
    |||||||||||||||| ||||||||| |||||||    
T  6388164 aatcggaaagtttgacaagtttgaccaagttaac 6388131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 327
Target Start/End: Original strand, 17234686 - 17234810
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||||| ||||||| | | ||||||||||| ||| ||| |||||||||||||||| | | ||||||||||||||||||||||||||| ||||||||| |    
T  17234686 aaatcgaatgttaactcgctgagtttaccaagtttgcgtttttaggtaccaaaatcctatcaactcggaggtaaactcgatttctggtaaaatcggaatg 17234785  T
Q  304 tttgacgagtttgac-cgagttaac 327  Q
    ||||||||||||||| |||||||||    
T  17234786 tttgacgagtttgactcgagttaac 17234810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 27915675 - 27915551
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    |||||||||||| ||||||||||||||||||||| ||  |||| |||||||||| | ||||||| | |||||||||||||||||||||||||||||  |     
T  27915675 tttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatg 27915576  T
Q  336 aactcgtgtaaaatcggccgagttt 360  Q
    |||||||||||| ||| ||||||||    
T  27915575 aactcgtgtaaactcgaccgagttt 27915551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 236 - 360
Target Start/End: Complemental strand, 27962094 - 27961970
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    |||||||||||| ||||||||||||||||||||| ||  |||| |||||||||| | ||||||| | |||||||||||||||||||||||||||||  |     
T  27962094 tttacgtgtttatgtaccaaaatcgtgttaactcagatttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatg 27961995  T
Q  336 aactcgtgtaaaatcggccgagttt 360  Q
    |||||||||||| ||| ||||||||    
T  27961994 aactcgtgtaaactcgaccgagttt 27961970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 356
Target Start/End: Original strand, 32497962 - 32498114
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    |||| |||||||||| ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||||||| ||||| || ||||||||| |    
T  32497962 aaattgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaagg 32498061  T
Q  304 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    ||| |||  |||||  |||||||||||  ||||||||||||||| ||| ||||    
T  32498062 tttaacggatttgattgagttaacactaggtaaactcgtgtaaactcgaccga 32498114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 42305394 - 42305242
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| ||||||| ||||| | ||||| | ||||||||  |||||||||||||||| |||||||| ||| |||||||| |    
T  42305394 aatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 42305295  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||| ||||| ||||||||| || ||||||||||||||    
T  42305294 aattggaaggtttaacgagattgactgagttaacattcggtaaactcgtgtaa 42305242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 43166466 - 43166314
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||   | |||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||| |   |||||||| |    
T  43166466 aatgttccgcaaatcgagtgttaatttttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaataagtttctggtaa 43166367  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| | || |||||||||||||||| |||||||||||| ||||||||||||||    
T  43166366 aattgaaaggtttgacgagtttgactgagttaacactcggtaaactcgtgtaa 43166314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 44725581 - 44725429
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||| ||| ||| | |  |||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  44725581 aatgttccgcaaatcgagtgttaaatctcagagattatcgagattacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 44725482  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  44725481 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 44725429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 16364117 - 16364279
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||  ||| ||| | | ||||||| ||||||||| ||||||||||||||||  ||||||| ||| ||||| || |    
T  16364117 aatgttccgcaaatcgagtgttaactctatgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctaaggtaaattcggtttctagtaa 16364216  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| |||||||||||  | ||||||||| ||||||||||||||| ||| ||||    
T  16364217 aatcggaaggtttaacgagtttgactaaattaacactcggtaaactcgtgtaaattcgaccga 16364279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 196 - 346
Target Start/End: Complemental strand, 43308296 - 43308146
Alignment:
Q  196 tgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaa 295  Q
    ||||||| ||||||||||||||| || |||| ||| | | ||| ||| |||||||||||||||||||||||||| ||  |||| ||| |||||||| |||    
T  43308296 tgttccgcaaatcgagtgttaactcttcgagattatcgagtttgcgtttttaggtaccaaaatcgtgttaactctgatataaaatcggtttctggtaaaa 43308197  T
Q  296 tcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    | |||| |||| || |||||||| |||||||||||| ||||||||||||||    
T  43308196 ttggaaggtttaacaagtttgactgagttaacactcggtaaactcgtgtaa 43308146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 28317168 - 28317075
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  |||||  |||  |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  28317168 tttacgtttttaggtggcaaaaaggtgaaaactcggaggtaaactcgatttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 28317075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 193
Target Start/End: Complemental strand, 3507344 - 3507166
Alignment:
Q  21 tgagagaagaactatttctattacttgagaggatactttgattcttgttttctt----------gcttggtttacaaatgacaagttcacccctttttat 110  Q
    |||||||||||  ||||||||| ||||||| |||||||| |||||| |||||||          ||||||||||||||||||||  || |||||||||||    
T  3507344 tgagagaagaaaaatttctattgcttgagatgatactttcattcttattttcttccttcaacttgcttggtttacaaatgacaaactctcccctttttat 3507245  T
Q  111 ataggctctaaaagagagttctagacacatcatatgataactttctacacacttcaagagagagttctatacacttctctcaa 193  Q
    |  ||||  ||| ||||||||||||||| |||||  | ||| |||||||||||||||| |||||||||| | |||||||||||    
T  3507244 a--ggcttcaaaggagagttctagacacgtcata--acaacattctacacacttcaagcgagagttctacatacttctctcaa 3507166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 41252176 - 41252261
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||  ||||| |||||||||||||| ||||||||||||| || ||||||||||||||||||||||||| ||||||| |||||    
T  41252176 tttaggtggcaaaaacgtgttaactcggaagtaaactcgatttttgatgaaatcggaaagtttgacgagtttaaccgagtcaacac 41252261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 24067110 - 24067202
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||| | |||||||||||| ||| |||||||||    
T  24067110 tttacgtttttaggtaccaaaatcgtgtcaactcggaggtgaactcaatttctggtaaaatcggcatgtttgacgagttcgactcgagttaac 24067202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 37131375 - 37131291
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| ||| |||||| ||||||||| |||||||||    
T  37131375 tttaggtaccaaaatcgtgtcaactcggaggtaaactcgacttctggtaaaatcagaatgtttgaagagtttgactcgagttaac 37131291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 329
Target Start/End: Complemental strand, 1528006 - 1527908
Alignment:
Q  231 ccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||||||| |||| ||  ||||| |||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||| |  |||||||||    
T  1528006 ccaattttacgtttttaagtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaatgttggacaagtttggctaagttaacac 1527908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 329
Target Start/End: Complemental strand, 33177946 - 33177851
Alignment:
Q  234 attttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||| || ||||||||||||||  ||||||| | | ||||||||||||||| ||||||||| | || |||||||||||||||| ||||||||||    
T  33177946 attttatgtttttaggtaccaaaaatgtgttaatttgaaggtaaactcgatttttggtgaaattgaaatgtttgacgagtttgactgagttaacac 33177851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 12522531 - 12522420
Alignment:
Q  223 cgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgag 322  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||||||            |||||||| |||| | || ||||||||||||||||||||    
T  12522531 cgagcttaccaagtttacgtttttaggtaccaaaatcgtgttaactcgg------------tttctggtaaaattgaaaggtttgacgagtttgaccgag 12522444  T
Q  323 ttaacactcagtaaactcgtgtaa 346  Q
    ||||||||  ||||||||||||||    
T  12522443 ttaacacttggtaaactcgtgtaa 12522420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 231 - 341
Target Start/End: Original strand, 41393955 - 41394065
Alignment:
Q  231 ccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacact 330  Q
    |||| ||||||| |||||||| |||||||||||||| ||||||||||||||  |||||| | |||||| || ||||||| | ||||| ||  ||||||||    
T  41393955 ccaagtttacgtttttaggtatcaaaatcgtgttaattcggaggtaaactcagtttctgataaaatcgaaaggtttgacaaatttgatcgtattaacact 41394054  T
Q  331 cagtaaactcg 341  Q
    | |||||||||    
T  41394055 cggtaaactcg 41394065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 346
Target Start/End: Original strand, 7466759 - 7466884
Alignment:
Q  221 tccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccg 320  Q
    |||||| ||||| | |||| || |||| |||| |||||||||||||||| |||||||| ||  |||||| | |||| |||| | || ||||||||||| |    
T  7466759 tccgagattaccgagtttatgtttttaagtacaaaaatcgtgttaactctgaggtaaaatcagtttctgataaaattggaaggcttaacgagtttgactg 7466858  T
Q  321 agttaacactcagtaaactcgtgtaa 346  Q
    |||||||||||  |||||||||||||    
T  7466859 agttaacactcgataaactcgtgtaa 7466884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 347
Target Start/End: Complemental strand, 26620423 - 26620331
Alignment:
Q  255 aaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||||||||| || |||||| ||  |||||| | |||||| |||||||||||||||||| |||||||||||||  ||||||| ||||||    
T  26620423 aaatcgtgttaacttggtggtaaattcagtttctgataaaatcgaaaagtttgacgagtttgatcgagttaacactcgataaactcatgtaaa 26620331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 3507970 - 3507903
Alignment:
Q  11 agataatacttgagagaagaactatttctattacttgagaggatactttgattcttgttttcttgctt 78  Q
    ||||||||  |||||||||||| ||||||||| |||||||| ||| |||||||||| |||||||||||    
T  3507970 agataatatatgagagaagaacaatttctattgcttgagagaataatttgattcttattttcttgctt 3507903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 327
Target Start/End: Original strand, 7760770 - 7760904
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||||||||||||    |||||||||  | ||||  | |||||||| ||||||||||| |||||| ||||||| | |||||||| | |    
T  7760770 aatgttccacaaatcgagtgttaacttatcgagtttactgagtttatatttttaggtatcaaaatcgtgtcaactcgaaggtaaatttgatttctgataa 7760869  T
Q  294 aatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||  |  |||||||||||||||| |||||||||    
T  7760870 aatcaaattgtttgacgagtttgactcgagttaac 7760904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 24082184 - 24082289
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    |||| |||||||||| |  ||||||||| || |||| |  ||||||||||||||| |||||||  | |||||||| ||| |||||||| |||||| || |    
T  24082184 aaattgagtgttaactcgacgagtttactaagtttatgattttaggtaccaaaattgtgttaatactgaggtaaattcggtttctggtaaaatcgaaagg 24082283  T
Q  304 tttgac 309  Q
    ||||||    
T  24082284 tttgac 24082289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 42423261 - 42423318
Alignment:
Q  303 gtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttt 360  Q
    ||||||||||||||||||||||||||||  |||||||| |||||| ||  ||||||||    
T  42423261 gtttgacgagtttgaccgagttaacactgggtaaactcctgtaaactctaccgagttt 42423318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 25725502 - 25725540
Alignment:
Q  153 ttctacacacttcaagagagagttctatacacttctctc 191  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  25725502 ttctacacatttcacgagagagttctatacacttctctc 25725540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 346
Target Start/End: Original strand, 37857409 - 37857447
Alignment:
Q  308 acgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  37857409 acgagtttgactgagttaacactcggtaaactcgtgtaa 37857447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 35879722 - 35879775
Alignment:
Q  275 taaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||||||||||| ||| |||| |||| |||||||||||||||| |||||||||    
T  35879722 taaactcgatttccggtaaaattggaatgtttgacgagtttgactcgagttaac 35879775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 1463809 - 1463641
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  1463809 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 1463710  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1463709 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 1463641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 6788062 - 6788230
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  6788062 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 6788161  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6788162 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 6788230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 193 - 362
Target Start/End: Original strand, 3000201 - 3000370
Alignment:
Q  193 aaatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 292  Q
    |||||||||  ||||| ||||||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||     
T  3000201 aaatgttccacaaatcaagtgttaactcgccgagtttactgattttacgtgtttaggtaccaaaatcgtgttaactcgggggtaaattcgatttatggta 3000300  T
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||    
T  3000301 aaatcgggaagtttgacgagtttgatcgagttaacactcaataaactcgtgtaaaatcggctgagtttac 3000370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 194 - 361
Target Start/End: Original strand, 16438668 - 16438835
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||||||| | | ||||||| ||||||||| ||||||||||||||| |||||||||||||| ||||||| |    
T  16438668 aatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggtaa 16438767  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttta 361  Q
    |||||||| ||||||||||||| | ||||||| ||||| ||||||||||||||| |||  ||||||||    
T  16438768 aatcggaaggtttgacgagtttaatcgagttagcactcggtaaactcgtgtaaactcgatcgagttta 16438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 10113918 - 10113750
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| |||||||||||||||||||||||| ||| |||| |    
T  10113918 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtcctaaaaacgtgttaactcggaggtaaactcgttttttggtaa 10113819  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||    
T  10113818 aatcggaaagtttgacgagtttgaccgagtttagactcagtaaactcgtgtgaaatcgggcgagtttac 10113750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 204 - 341
Target Start/End: Complemental strand, 31975780 - 31975643
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||| ||||||||| ||||||||||||  | |||| ||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| |    
T  31975780 aaatcaagtgttaactctccgagtttactgagtttatgtgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttcttgtaaaatcggaagg 31975681  T
Q  304 tttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  31975680 tttgacgagtttgaccgagttaagactcggtaaactcg 31975643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 194 - 360
Target Start/End: Original strand, 2606857 - 2607023
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||| ||||||| ||  ||||||||  | |||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |    
T  2606857 aatgttccgcaaatcgaatgttaactctttgagtttactgagtttacgtgtttaggcaccaaaatcgttttaactctgaggtaaactcgatttctggtaa 2606956  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttt 360  Q
    |||| ||| |||||| ||||||||||||||||||||||| ||||||| | |||| ||| ||||||||    
T  2606957 aatcagaaggtttgatgagtttgaccgagttaacactcaataaactcttataaactcgaccgagttt 2607023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 31896047 - 31896199
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||  ||||||| ||| | | | ||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  31896047 aatgttccgtaaatcgagtgttaaatctccgagattatcgagtatacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 31896146  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  31896147 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 31896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 331
Target Start/End: Original strand, 7497508 - 7497645
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||| ||||||| ||||||| ||| ||| ||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||| |    
T  7497508 aatgttccgcaaatcgaatgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaa 7497607  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactc 331  Q
    ||| |||| |||| ||||||||||  ||||||||||||    
T  7497608 aattggaaggtttaacgagtttgattgagttaacactc 7497645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 331
Target Start/End: Complemental strand, 14262227 - 14262090
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| |||||||||||| |    
T  14262227 aatgttccgcaaatcgagtgttaactctccgagattatctagtttacttttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggtaa 14262128  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactc 331  Q
    ||| |||| |||| ||||||||||| ||||||||||||    
T  14262127 aattggaaggtttaacgagtttgactgagttaacactc 14262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 31996344 - 31996251
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31996344 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 31996251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 194 - 341
Target Start/End: Original strand, 31067842 - 31067989
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  31067842 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 31067941  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||| |||| |||| ||||||||||| |||||||||||| |||||||||    
T  31067942 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcg 31067989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 30384855 - 30384703
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||| |||| ||||||||||||||| ||||||| ||||| | |||| || ||||||||| ||||||||||||||||  ||||||| ||  |||||| | |    
T  30384855 aatgatccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctgataa 30384756  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  30384755 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 30384703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 338
Target Start/End: Complemental strand, 34758870 - 34758726
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||||||| |||||| ||||||| ||| ||| ||||||| ||||||||| |||||||||||||||| |||||||| ||| |||||| | |    
T  34758870 aatgttccgcaaatcgagcgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataa 34758771  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaac 338  Q
    ||| |||| |||| || |||||||| |||||||||||| ||||||    
T  34758770 aattggaaggtttaacaagtttgactgagttaacactcggtaaac 34758726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 328
Target Start/End: Original strand, 21199558 - 21199650
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaaca 328  Q
    ||||||| |||||||  ||||| |||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21199558 tttacgtttttaggtggcaaaaccgtgttaactccaaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaaca 21199650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 4200242 - 4200095
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | |||| |||| |||||| ||||||||| |||||||| ||| |||||||| |    
T  4200242 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaagtacaaaaatcatgttaactctgaggtaaaatcggtttctggtaa 4200143  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||| |||| |||| ||||||||||| |||||||||||| |||||||||    
T  4200142 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcg 4200095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 236 - 327
Target Start/End: Complemental strand, 8779677 - 8779586
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaac 327  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||    
T  8779677 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccaagttaac 8779586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 307
Target Start/End: Complemental strand, 28900965 - 28900863
Alignment:
Q  196 tgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaa 295  Q
    ||||||||||||||||||||||| ||||||||||||          |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  28900965 tgttccgtaaatcgagtgttaactctccgagtttaca---------tgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaa 28900875  T
Q  296 tcggaaagtttg 307  Q
    |||||| |||||    
T  28900874 tcggaaggtttg 28900863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 31535148 - 31535068
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagtt 324  Q
    |||||||| |||||| |||||||||| |||| |||||||||||||||| |||||| || ||||||||||||||||||||||    
T  31535148 tttaggtatcaaaattgtgttaactctgaggcaaactcgatttctggtaaaatcgaaaggtttgacgagtttgaccgagtt 31535068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 362
Target Start/End: Original strand, 12028996 - 12029105
Alignment:
Q  253 caaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgg 352  Q
    ||||| ||||||||||  |||||||||||||||| |  |||||||| || ||||||||||||||||  |||||||||  | |||||||||||||| |||     
T  12028996 caaaaacgtgttaactttgaggtaaactcgatttttattgaaatcgaaatgtttgacgagtttgacatagttaacacgtattaaactcgtgtaaactcga 12029095  T
Q  353 ccgagtttac 362  Q
    ||||||||||    
T  12029096 ccgagtttac 12029105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 318
Target Start/End: Original strand, 13461377 - 13461459
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac 318  Q
    ||||||| |||| ||| ||||||||||| |||||||||||||||||| ||| |||| ||||| ||| ||||||||||||||||    
T  13461377 tttacgtttttatgtatcaaaatcgtgtcaactcggaggtaaactcggtttttggtaaaatcagaatgtttgacgagtttgac 13461459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 7835460 - 7835387
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgac 309  Q
    ||||||| |||||||  ||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||    
T  7835460 tttacgtttttaggtggcaaaaacgtgttaagtcggaggtaaactcggtttttggtgaaatcggaaagtttgac 7835387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 346
Target Start/End: Original strand, 34773873 - 34773947
Alignment:
Q  272 aggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||||||| ||| |||||||| |||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  34773873 aggtaaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 34773947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 24194469 - 24194529
Alignment:
Q  288 tggtgaaatcggaaagtttgacgagt-ttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||| |||| |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  24194469 tggtaaaattggaaagtttgacgagtattgaccgagttaacactcggtaaactcgtgtaaa 24194529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 21010950 - 21010883
Alignment:
Q  259 cgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaa 326  Q
    |||||||| ||| |||| |||||| ||| ||||||||||  || ||||||||||||| ||||||||||    
T  21010950 cgtgttaattcgaaggtcaactcggtttttggtgaaatcaaaatgtttgacgagtttaaccgagttaa 21010883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 4e-57; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 8598621 - 8598789
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  8598621 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 8598720  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8598721 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttac 8598789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 49296078 - 49296246
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| |    
T  49296078 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctggtaa 49296177  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  49296178 aatcgaaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 49296246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 48379559 - 48379712
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||| |    
T  48379559 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcgatttctggtaa 48379658  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||| | || ||||||||||| |||||||||||| |||||||||||||||    
T  48379659 aatcggaaggcttaacgagtttgactgagttaacactcggtaaactcgtgtaaa 48379712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 223 - 352
Target Start/End: Original strand, 53835953 - 53836082
Alignment:
Q  223 cgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgag 322  Q
    |||||||||| | ||||||||||||||| | |||| |||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  53835953 cgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaacttggaggtaaacttgatttctggtaaaatcggaaagtttgacgagtttgaccgag 53836052  T
Q  323 ttaacactcagtaaactcgtgtaaaatcgg 352  Q
    |||||||||||||||||||||| |||||||    
T  53836053 ttaacactcagtaaactcgtgtgaaatcgg 53836082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 358
Target Start/End: Complemental strand, 7437710 - 7437546
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||||||||  | ||||| |||||||||||||||||||||||||| ||||| |||||||| ||| |||| |    
T  7437710 aatgttccgcaaatcgagtgttaactctccgagtttactgagtttacttgtttaggtaccaaaatcgtgttaacacggagataaactcggtttttggtaa 7437611  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagt 358  Q
    |||||||| || ||  |||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  7437610 aatcggaaggtatggtgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagt 7437546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 204 - 360
Target Start/End: Original strand, 33693228 - 33693384
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||||| ||||||| ||||||||||||| | |||| |  ||||  ||||||||||||||||||| |||||||||||||||||||||| ||||| ||| |    
T  33693228 aaatcgaatgttaactctccgagtttaccgagtttatgattttacataccaaaatcgtgttaacttggaggtaaactcgatttctggtaaaatcagaagg 33693327  T
Q  304 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttt 360  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  33693328 tttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttt 33693384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 194 - 341
Target Start/End: Complemental strand, 21386623 - 21386476
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| ||||||||||||| | ||||| | |||||||| ||||||||||||||||  ||||||||||||||||||||| |    
T  21386623 aatgttccccaaatcgagtgttaactctccgagtttaccgagtttacatttttaggtatcaaaatcgtgttaacttagaggtaaactcgatttctggtaa 21386524  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  21386523 aatcgaaaagtttgacgagtttgaccgagttgacactcggtaaactcg 21386476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 52810767 - 52810929
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| ||||| |||||||||| ||||||||||||  ||||||| |    
T  52810767 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcgggttctggtaa 52810866  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| ||||||||||| |||||||||||| ||||||| ||||||| ||| ||||    
T  52810867 aatcggaaggtttaacgagtttgactgagttaacactcggtaaacttgtgtaaactcgaccga 52810929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 26107738 - 26107891
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||||||||| |||| ||||||| ||| | | ||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||||      
T  26107738 aatgttccgcaaatcgagtgataactctccgagattaacgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcgatttctggtac 26107837  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||||||||||    
T  26107838 aatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaa 26107891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 12074370 - 12074193
Alignment:
Q  15 aatacttgagagaagaactatttctattactt-gagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttatata 113  Q
    |||| |||| |||| |||||||| ||||  || ||||||||||||| |||||||||| |||||||||||||||||||||||| || ||| ||||||||      
T  12074370 aatatttgaaagaataactatttttattgtttagagaggatacttttattcttgtttgcttgcttggtttacaaatgacaagctctcccatttttata-- 12074273  T
Q  114 ggctctaaaagagagttctagacacatcatatgataactttctacacacttcaagagagagttctatacacttctctcaa 193  Q
    ||||  || |||||||||||||||||||||  |||| |||||||||||||||||||||| |||||| |||||||||||||    
T  12074272 ggcttcaagagagagttctagacacatcatgggatacctttctacacacttcaagagagtgttctacacacttctctcaa 12074193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 16155168 - 16155292
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||| ||| || | |||| |||| |||||||||||||||||||||||||||||||||    
T  16155168 tttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttttgataaaattggaaggtttgacgagtttgaccgagttaacactcagta 16155267  T
Q  336 aactcgtgtaaaatcggccgagttt 360  Q
    |||||||||||| ||| ||||||||    
T  16155268 aactcgtgtaaactcgaccgagttt 16155292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 37455256 - 37455408
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| |  |||||| ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  37455256 aatgttccgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 37455355  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| ||||||||||||| |||||||||||||    
T  37455356 aattggaaggtttaacgagtttgactgagttaacactcactaaactcgtgtaa 37455408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 49458362 - 49458486
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    |||||||||||||||| |||||| |||||||||| || |||||||||||||||||| ||||||||| ||||||||||||||||| | |||||||||||||    
T  49458362 tttacgtgtttaggtatcaaaattgtgttaactctgaagtaaactcgatttctggtaaaatcggaaggtttgacgagtttgaccaaattaacactcagta 49458461  T
Q  336 aactcgtgtaaaatcggccgagttt 360  Q
    |||||||||||| ||| ||||||||    
T  49458462 aactcgtgtaaactcgaccgagttt 49458486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 50761891 - 50761739
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||| | ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||| | ||||||||||||    
T  50761891 aatgttcagcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatagatttctggtga 50761792  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||  ||||||||||||||    
T  50761791 aattggaaggtttaacgagtttgactgagttaacactaggtaaactcgtgtaa 50761739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 194 - 361
Target Start/End: Complemental strand, 4962870 - 4962703
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| ||| |||||| |||  |||||| | | ||||||| |||||||| |||||||||||||||| ||||||||||||||||||  || |    
T  4962870 aatgttccgcaaattgagcgttaactctctaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaacttggaggtaaactcgatttcaagtaa 4962771  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagttta 361  Q
    ||||| || ||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||    
T  4962770 aatcgaaaggtttgacgagtttgaccgagttaacactcggtaaactcatgtaaactcgaccgagttta 4962703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 7665553 - 7665720
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| | |||| |||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||| |    
T  7665553 aatgttccacaaatcgagtgttaactcgccgaatttacctagtttacgtttttagctaccaaaatcgtgttaactcggaggtaaactcgatttttggtaa 7665652  T
Q  294 aatcggaaagtttgacgagtttgac-cgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||  |||||||||||||||  ||||||  |||| ||||||||||||||| ||| ||||||||||    
T  7665653 aatcggaatatttgacgagtttgactagagtta--actcggtaaactcgtgtaaactcgaccgagtttac 7665720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 198 - 356
Target Start/End: Original strand, 20833310 - 20833468
Alignment:
Q  198 ttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatc 297  Q
    ||||| ||||||||||||||| ||| ||| ||| | | ||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||| |||||    
T  20833310 ttccgcaaatcgagtgttaactctctgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatc 20833409  T
Q  298 ggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||| |||| ||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  20833410 ggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 20833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 54629260 - 54629422
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| |||||||||| ||| ||| ||||| | ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| | |    
T  54629260 aatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctgataa 54629359  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    || || || |||| ||||||||||   ||||||||||||||||||||||||||| ||| ||||    
T  54629360 aagcgaaaggtttaacgagtttgattcagttaacactcagtaaactcgtgtaaactcgaccga 54629422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 31646052 - 31645900
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||| || ||||||||||||||| ||||||| ||||| |  |||||| ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  31646052 aatgtttcgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 31645953  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| | ||||||||| |||||||||||| ||||||||||||||    
T  31645952 aattggaaggtttaaagagtttgactgagttaacactcggtaaactcgtgtaa 31645900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 40897540 - 40897692
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| | ||||||||||||| ||||||| ||||| | ||||||  ||||||||| |||||||||||||||| |||||||| ||| |||||| | |    
T  40897540 aatgttccgcagatcgagtgttaactctccgagattaccgaatttacgattttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgataa 40897639  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  40897640 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 40897692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 22489581 - 22489475
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||||||||||| |||||| |||||||| || || |||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  22489581 tttacgtgtttaggtgccaaaaacgtgttaaatcagatgtaaactcgatttctggtaaaatcggaaggtttaacgagtttgaccgagttaacactcagta 22489482  T
Q  336 aactcgt 342  Q
    |||||||    
T  22489481 aactcgt 22489475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 50903100 - 50902938
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||| || || |||||||||||| |||||||  || | | ||||||| |||| |||| |||||||||||||||| |||||||||||| |||||||| |    
T  50903100 aatgtttcgcaagtcgagtgttaactctccgagaatatcgagtttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaa 50903001  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  50903000 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 50902938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 11 - 194
Target Start/End: Original strand, 15672100 - 15672280
Alignment:
Q  11 agataatacttgagagaagaactatttctattactt-gagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcaccccttttta 109  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||| ||||||||||| ||| || || | |||      
T  15672100 agataatatttgagagaagaactattt-tattacttagagaggatattttgattcttgtttgcttgcttgctttacaaatgagaagctctcctccttt-- 15672196  T
Q  110 tataggctctaaaagagagttctagacacatcatatgataactttctacacacttcaagagagagttctatacacttctctcaaa 194  Q
    |||||| || ||  || ||||||||||||||| || ||||||||||||||||||||||||||| ||| || ||||||||| ||||    
T  15672197 tataggatccaagggatagttctagacacatccta-gataactttctacacacttcaagagagtgttatacacacttctcccaaa 15672280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 339
Target Start/End: Complemental strand, 51737478 - 51737333
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||| ||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||||||| ||||| || |    
T  51737478 aatgttccgcaaatcgagtgttaactctctgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaa 51737379  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaact 339  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||    
T  51737378 aatcggaaggtttaacgagtttgactgagttaacactcggtaaact 51737333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 331
Target Start/End: Complemental strand, 52617763 - 52617626
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||| ||| ||| | | ||||||| ||||||||| |||||||||||||||| |||||||||||| |||||||| |    
T  52617763 aatgttccgcaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaa 52617664  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactc 331  Q
    |||||||| |||| |||||||||||  |||||||||||    
T  52617663 aatcggaaggtttaacgagtttgactaagttaacactc 52617626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 23753180 - 23753028
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||| || ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| |||||||||||||||| |||||||| ||| ||| |||| |    
T  23753180 aatgtttcgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttttggtaa 23753081  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| || |||||||| |||||||||||| ||||||||||||||    
T  23753080 aattggaaggtttaaccagtttgactgagttaacactcggtaaactcgtgtaa 23753028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 194 - 341
Target Start/End: Original strand, 39038499 - 39038646
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| ||| ||| ||| | | ||||||| ||||||||| ||||| |||||||||| |||||||||||| |||||||| |    
T  39038499 aatgttccacaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatggtgttaactctgaggtaaactcggtttctggtaa 39038598  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    |||||||| |||| |||||||||||  ||||||||||| |||||||||    
T  39038599 aatcggaaggtttaacgagtttgactaagttaacactcggtaaactcg 39038646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 44905646 - 44905484
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | |||||||  |||||||| ||||||||||||| || ||||||| |||| |||||||| |    
T  44905646 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgttcttaggtacaaaaatcgtgttaattctgaggtaatctcggtttctggtaa 44905547  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||| ||| | || |||| |||||| |||||||||||| |||||||||| |||| ||| ||||    
T  44905546 aatcagaaggcttaacgaatttgactgagttaacactcggtaaactcgtataaactcgaccga 44905484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 9818661 - 9818568
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  9818661 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 9818568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 341
Target Start/End: Original strand, 18750052 - 18750199
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||| ||  ||||  | ||||||| ||||||||| |||||| ||||||||| |||||||||||| |||||||| |    
T  18750052 aatgttccgcaaatcgagtgttaactctctgatattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaa 18750151  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||| |||| | || ||||||||||| |||||||||||| |||||||||    
T  18750152 aattggaaggcttaacgagtttgactgagttaacactcggtaaactcg 18750199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 195 - 341
Target Start/End: Original strand, 17946638 - 17946780
Alignment:
Q  195 atgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaa 294  Q
    |||||||| ||||||||||||||  ||||||| ||| | | ||||||| ||||||||| |||||| ||||||||| |||||||||||| |||||||| ||    
T  17946638 atgttccgcaaatcgagtgttaattctccgagattatcgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaa 17946737  T
Q  295 atcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||||||| |||| ||||||||    |||||||||||| |||||||||    
T  17946738 atcggaaggtttaacgagttt----gagttaacactcggtaaactcg 17946780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 315
Target Start/End: Original strand, 43172889 - 43173010
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||| ||||||| ||   |||||| | | |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  43172889 aatgttccgcaaatcgaatgttaactctttaagtttatcgagtttatgtgtttaggtaccaaaatcgtgttgactcggaggtaaactcgatttctggtaa 43172988  T
Q  294 aatcggaaagtttgacgagttt 315  Q
    ||||| || |||||| ||||||    
T  43172989 aatcgaaaggtttgaagagttt 43173010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 25049875 - 25049967
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||| || ||||||||| |||||| ||||||||| |||||||||    
T  25049875 tttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgatttctagtaaaatcggaatgtttgatgagtttgactcgagttaac 25049967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 36673943 - 36673791
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||| | ||||||||||||||  ||||||| ||| | | || || | |||| |||| |||||||||||||||| |||||||| ||| |||||||| |    
T  36673943 aatgttctgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaagtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 36673844  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| ||||||||||||  |||||||||||||    
T  36673843 aattggaaggtttaacgagtttgactgagttaacactcgataaactcgtgtaa 36673791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 45602545 - 45602422
Alignment:
Q  205 aatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagt 304  Q
    |||||||||||||| | ||||||||||| | ||||||| ||| ||||  ||||| |||| |||||| |||||||||| ||||||||| |||||| || ||    
T  45602545 aatcgagtgttaactcgccgagtttaccgaatttacgtttttgggtattaaaattgtgtcaactcgtaggtaaactcaatttctggtaaaatcgaaatgt 45602446  T
Q  305 ttgacgagtttgac-cgagttaac 327  Q
    |||||||||||||| |||||||||    
T  45602445 ttgacgagtttgactcgagttaac 45602422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 47467484 - 47467415
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||||||| ||||||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||    
T  47467484 gtgttaactcgaaggtaaactcggtttttggtgaaatcgaaaattttgacgagtttgaccgagttaacac 47467415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 194 - 341
Target Start/End: Original strand, 42736269 - 42736416
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||| ||||||||     |||||||| | | ||| ||| ||||| ||||||||||||||||||   ||| ||||||   |||||||| |    
T  42736269 aatgttccgtaaatcaagtgttaatttgtcgagtttatcgagtttgcgtttttagataccaaaatcgtgttaacattgagataaacttagtttctggtaa 42736368  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||||  |||||||||||||||||| |||||||||| || |||||||||    
T  42736369 aatcaaaaagtttgacgagtttgatcgagttaacattcggtaaactcg 42736416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 34483823 - 34483737
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||||||||| |||||||| ||| |||||||| ||||  ||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  34483823 gtgttaactctgaggtaaaatcggtttctggtaaaatttgaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 34483737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 275 - 329
Target Start/End: Original strand, 49293846 - 49293900
Alignment:
Q  275 taaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  49293846 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgaattaacac 49293900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 37832576 - 37832669
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| ||||| || |||||| ||||||   ||| |||||||||| |||||||||||||||||||||||||||||||    
T  37832576 tttacgtttttaggtggcaaaaacgtgtaaattcggagataaacttagtttttggtgaaatcagaaagtttgacgagtttgaccgagttaacac 37832669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 27261435 - 27261490
Alignment:
Q  274 gtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  27261435 gtaaactcgatttttggtgaaatcggaaagtttgacgaatttgactgagttaacac 27261490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 40064282 - 40064375
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| ||||| |||| ||||||||| |   ||| ||||||||||| |||||||||||| ||||||| |||||||||    
T  40064282 tttacgtttttaggtggcaaaaacgtgtaaacttggaggtaaatttagtttttggtgaaatcgaaaagtttgacgaatttgaccaagttaacac 40064375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 45863232 - 45863307
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactc 269  Q
    ||||||||| ||||||||||||||| ||| ||| |||   | ||||||| ||||||||| ||||||||||||||||    
T  45863232 aatgttccgcaaatcgagtgttaactctctgagattaaagagtttacgtttttaggtacaaaaatcgtgttaactc 45863307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 53645407 - 53645332
Alignment:
Q  239 acgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtt 314  Q
    |||| |||||||  ||||| ||| | ||||| |||||||||||  ||| |||||||||||||||||||||||||||    
T  53645407 acgtttttaggtggcaaaaacgtataaactcagaggtaaactcagtttttggtgaaatcggaaagtttgacgagtt 53645332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 2118526 - 2118472
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcg 298  Q
    ||||||| | |||| |||||||||||| ||||||||||||||| | |||||||||    
T  2118526 tttaggtgcaaaaaacgtgttaactcgaaggtaaactcgattttttgtgaaatcg 2118472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 21718552 - 21718458
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttct 288  Q
    ||||||||  ||||||||||||||| |  ||| |||||  | ||||||| || || |||||||||||||| |||||  || ||||||||||||||    
T  21718552 aatgttccaaaaatcgagtgttaactcgtcgattttactgagtttacgttttaagataccaaaatcgtgtcaactcaaagataaactcgatttct 21718458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 19386987 - 19386895
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  |||||  ||||||||||||| |||||||| |||  || | |||| |||| || ||| ||||||||||||||||||||    
T  19386987 tttacgtatttaggtgtcaaaaatgtgttaactcggatgtaaactcaattattgataaaattggaatgtctga-gagtttgaccgagttaacac 19386895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 297
Target Start/End: Complemental strand, 27994868 - 27994807
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatc 297  Q
    |||||||||||||| ||||||||| ||| |||||||| | ||||||| ||| |||| |||||    
T  27994868 tttacgtgtttaggaaccaaaatcatgtaaactcggacgaaaactcgttttttggtaaaatc 27994807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 194 - 362
Target Start/End: Original strand, 14741388 - 14741556
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| |||||||||||||||||||||||||||||| || |    
T  14741388 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactcgatttctagtaa 14741487  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  14741488 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 14741556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 194 - 362
Target Start/End: Complemental strand, 4640012 - 4639844
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||| |||| ||| |  |||||||||| | ||||||||||||||| | |||| ||||||||||||||||||||||| ||||||||| |    
T  4640012 aatgttccacaaatcgcgtgtcaactcggcgagtttaccgagtttacgtgtttaggtgctaaaaacgtgttaactcggaggtaaactctatttctggtaa 4639913  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  4639912 aatcggaaattttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcgggcgagtttac 4639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 18790960 - 18791060
Alignment:
Q  11 agataatacttgagagaagaactatttctattacttgagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18790960 agataatacttgagagaagaactatttctattacttgagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttctcccctttttat 18791059  T
Q  111 a 111  Q
    |    
T  18791060 a 18791060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 42610579 - 42610732
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| |||||||||| ||| ||||||||| | ||||||||||||||||||||||||||||||| |  |||||||||| | |||||||| |    
T  42610579 aatgttccgcaaattgagtgttaactctctgagtttaccgaatttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaacttggtttctggtaa 42610678  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||| ||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  42610679 aatcagaaggtttgacgagtttgaccgagttaacactgggtaaactcgtgtaaa 42610732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 29893381 - 29893543
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||| | |||| |||| |||||||||||||||| |||||||||||  ||||||||||    
T  29893381 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtacaaaaatcgtgttaactctgaggtaaactcagtttctggtga 29893480  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    ||||| || |||| ||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  29893481 aatcgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 29893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 37328316 - 37328478
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||||||||||| || ||||||| ||| | | ||||||| ||||||||| ||||||||||||||||  |||||||||||||||||||| |    
T  37328316 aatgttccgcaaatcgagtgttgactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaactcgatttctggtaa 37328415  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| ||| ||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  37328416 aatcggaaggtttaacgtgtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 37328478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 33892030 - 33891878
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||||| ||||||| ||||||||| ||||||||||||||||  ||||||| ||| |||||||| |    
T  33892030 aatgttccgcaaatcgagtgttaactctccgagattaccaagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcggtttctggtaa 33891931  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| |||| |||||| ||||||||||||| |||||||||||||    
T  33891930 aattggaaggtttaacgaatttgactgagttaacactcaataaactcgtgtaa 33891878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 12740779 - 12740932
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||| || ||||||||||||||| ||||||| ||||| | ||||||| |||||||||||||||||||||||||| |||||||||||| | |||||| |    
T  12740779 aatgttacgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtgtctggtaa 12740878  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    ||| |||| ||||||||||||||||  ||||| ||||| ||||| |||||||||    
T  12740879 aattggaaggtttgacgagtttgactaagttagcactcggtaaagtcgtgtaaa 12740932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 194 - 339
Target Start/End: Complemental strand, 44256551 - 44256406
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||| ||| ||||||||||||||| ||||||| ||| | | ||||||| ||||| ||| |||||||||||||||| ||||||||||||||||||||| |    
T  44256551 aatgtcccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttagatacaaaaatcgtgttaactctgaggtaaactcgatttctggtaa 44256452  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaact 339  Q
    |||||||| |||| ||||||||||| |||||||||||| |||||||    
T  44256451 aatcggaaggtttaacgagtttgactgagttaacactcggtaaact 44256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 8675740 - 8675903
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt-g 292  Q
    |||||| || ||||||||||||||| ||||||| ||||| | || |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||      
T  8675740 aatgtttcgcaaatcgagtgttaactctccgagattaccgagttaacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcggtttctggtaa 8675839  T
Q  293 aaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||| || |||||||||||||||| ||||||||||||  |||||||||||||| ||| ||||    
T  8675840 aaatcgaaaggtttgacgagtttgactgagttaacactcgataaactcgtgtaaactcgaccga 8675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 197 - 346
Target Start/End: Complemental strand, 40460507 - 40460358
Alignment:
Q  197 gttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaat 296  Q
    |||||| ||||||||||||||| || |||| ||||| | ||||||  ||||||||| |||||||||||||||| |||||||| ||| |||||||| ||||    
T  40460507 gttccgcaaatcgagtgttaactcttcgagattaccgagtttacgcttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaat 40460408  T
Q  297 cggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
     |||| |||| ||||||||||| |||||||||||||||| ||||||||||    
T  40460407 tggaaggtttaacgagtttgactgagttaacactcagtatactcgtgtaa 40460358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 510055 - 510207
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  510055 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 510154  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  510155 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 510207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 18838819 - 18838971
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  18838819 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 18838918  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| |||||||||||  |||||||| || ||||||||||||||    
T  18838919 aattggaaggtttaacgagtttgactaagttaacattcggtaaactcgtgtaa 18838971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 28342720 - 28342872
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  28342720 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 28342819  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  28342820 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 28342872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 39028496 - 39028648
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| ||||| |||| ||||| |||||||| ||| ||||||||      
T  39028496 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgtaaactctgaggtaaaatcggtttctggtac 39028595  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| ||||  ||| ||||||||||| |||||||||||||||||||||||||||    
T  39028596 aattggaagatttaacgagtttgactgagttaacactcagtaaactcgtgtaa 39028648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 39784516 - 39784668
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||  || |||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  39784516 aatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 39784615  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  39784616 aattggaaggtttaacgagtttgacagagttaacactcggtaaactcgtgtaa 39784668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 194 - 341
Target Start/End: Original strand, 23016954 - 23017101
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||||||| ||||||||||||||||| |  |||||||||||  |||||| ||||  || |||||| ||||||||| ||||||||||||||||||| || |    
T  23016954 aatgttccataaatcgagtgttaacattttgagtttaccaaacttacgtttttacatatcaaaattgtgttaacttggaggtaaactcgatttctcgtaa 23017053  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcg 341  Q
    ||| ||||  |||||||||||||||||||||||||||| |||||||||    
T  23017054 aattggaagatttgacgagtttgaccgagttaacactcggtaaactcg 23017101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 37972673 - 37972511
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||||||||||||||  || ||| ||||| | ||||||| |||||||||||||||||||||||||| ||| |||||||  |||||||| |    
T  37972673 aatgttccgcaaatcgagtgttaactttctgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgagataaactcagtttctggtaa 37972574  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||| |||| |||| |||||| |||||| ||||  ||||||||||||||| ||| ||||    
T  37972573 aatcggaaggtttaacgaatttgactgagttagcacttggtaaactcgtgtaaactcgaccga 37972511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 198 - 356
Target Start/End: Complemental strand, 44121725 - 44121567
Alignment:
Q  198 ttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatc 297  Q
    ||||| ||||||||||||||| ||| ||| ||||| | ||||||| ||||||||| |||||||||||||||  |||||||| ||| |||||||| |||||    
T  44121725 ttccgcaaatcgagtgttaactctctgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactatgaggtaaattcggtttctggtaaaatc 44121626  T
Q  298 ggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||| | || ||||||||||| |||||||||||  ||||||||||||||| ||| ||||    
T  44121625 ggaaggcttaacgagtttgactgagttaacacttggtaaactcgtgtaaactcgaccga 44121567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 7993566 - 7993719
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | | ||  | |||| |||| |||||||||||||||  |||||||||||| |||||||| |    
T  7993566 aatgttccgcaaatcgagtgttaactctccgagattaccgagtatatatttttaagtacaaaaatcgtgttaactatgaggtaaactcggtttctggtaa 7993665  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||| |||| ||||||||||| |||||||||||| ||||||| |||||||    
T  7993666 aatcggaaggtttaacgagtttgactgagttaacactcggtaaactggtgtaaa 7993719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 194 - 347
Target Start/End: Original strand, 29585923 - 29586076
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| | || |||||||||| ||| ||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||| ||| |||| ||| |    
T  29585923 aatgttccgcagattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaagtcggtttcgggtaa 29586022  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||| |||| | ||||||||| |||||||||||| |||||||||||||||    
T  29586023 aatcggaaggtttaatgagtttgactgagttaacactcggtaaactcgtgtaaa 29586076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 29614591 - 29614439
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| |||||||||||||||| |||||||| ||| |||||||| |    
T  29614591 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaa 29614492  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| | || |||| ||||||||||| |||||||||||| ||||||||||||||    
T  29614491 aattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 29614439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 119 - 193
Target Start/End: Original strand, 18791654 - 18791728
Alignment:
Q  119 taaaagagagttctagacacatcatatgataactttctacacacttcaagagagagttctatacacttctctcaa 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18791654 taaaagagagttctagacacatcatatgataactttctacacacttcaagagaaagttctatacacttctctcaa 18791728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 23101700 - 23101852
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||  ||||||| ||| | | ||||| | ||||||||| ||||||||||||||||  ||||||| ||  |||||||| |    
T  23101700 aatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctaaggtaaaatcagtttctggtaa 23101799  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  23101800 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 23101852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 194 - 346
Target Start/End: Complemental strand, 28034644 - 28034492
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||| ||| ||||| | ||||||| |||| |||| |||||||||||||||| || ||||| ||| |||||||| |    
T  28034644 aatgttccgcaaatcgagtgttaactctctgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgatgtaaaatcggtttctggtaa 28034545  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||  |||||||| |||||    
T  28034544 aattggaaggtttaacgagtttgactgagttaacacttggtaaactcatgtaa 28034492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 309
Target Start/End: Original strand, 32884180 - 32884295
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||| ||||||| ||||| | ||||||| ||||||||| ||||||| |||||||| |||||||||||  |||||||| |    
T  32884180 aatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgagttaactctgaggtaaactctgtttctggtaa 32884279  T
Q  294 aatcggaaagtttgac 309  Q
    |||||||| |||||||    
T  32884280 aatcggaaggtttgac 32884295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 21024078 - 21024196
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 343  Q
    |||||||  ||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    ||||||||||    
T  21024078 tttaggtgacaaaaacgtgttaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcgtg 21024177  T
Q  344 taaaatcggccgagtttac 362  Q
    |||| | | ||||||||||    
T  21024178 taaacttgtccgagtttac 21024196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 194 - 356
Target Start/End: Original strand, 41827737 - 41827899
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| |||| |||||||||| ||| ||| |||   | ||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||| |    
T  41827737 aatgttccgcaaattgagtgttaactctctgagattattgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaa 41827836  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||| |||  ||| || |||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  41827837 aatcagaagatttaacaagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 41827899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 3023343 - 3023495
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    |||| |||| ||||||||||||||| ||||||| ||| | | |||| || ||||||||| |||||| ||||||||  |||||||| ||| |||||| | |    
T  3023343 aatgatccgcaaatcgagtgttaactctccgagattatcgagtttatgtttttaggtacaaaaatcatgttaactttgaggtaaaatcggtttctgataa 3023442  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  3023443 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 3023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 16709397 - 16709534
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||| |||||||||| |  ||||||||| | ||||||| ||||||||||||||||||| |||||| |||||||||||  ||  |||| |    
T  16709397 aatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tggtaa 16709494  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcag 333  Q
    | |||||| ||||||| |||||||||||||||||||||||    
T  16709495 actcggaaggtttgacaagtttgaccgagttaacactcag 16709534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 333
Target Start/End: Original strand, 17683633 - 17683770
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||| |||||||||| |  ||||||||| | ||||||| ||||||||||||||||||| |||||| |||||||||||  ||  |||| |    
T  17683633 aatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactcagtt--tggtaa 17683730  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcag 333  Q
    | |||||| ||||||| |||||||||||||||||||||||    
T  17683731 actcggaaggtttgacaagtttgaccgagttaacactcag 17683770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 43172116 - 43172220
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||| ||||||||| | ||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||| |    
T  43172116 aatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacatttttaggtatcaaaatcatgttaactcggaggtaaactcgatttctggtaa 43172215  T
Q  294 aatcg 298  Q
    |||||    
T  43172216 aatcg 43172220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 356
Target Start/End: Complemental strand, 48136982 - 48136862
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||  |||||||| ||||  ||| |||||||||||||||| ||||||||||||  ||    
T  48136982 tttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcagtttctggtaaaattagaaggtttgacgagtttgactgagttaacactcgata 48136883  T
Q  336 aactcgtgtaaaatcggccga 356  Q
    || ||||||||| ||| ||||    
T  48136882 aattcgtgtaaactcgaccga 48136862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 194 - 327
Target Start/End: Complemental strand, 26201928 - 26201794
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  |||||||||||||||   ||||||||||| | ||||| | |||||||||||||||||||| ||||||||||||||||| |||  || | |    
T  26201928 aatgttccacaaatcgagtgttaacttgccgagtttaccgaatttacatttttaggtaccaaaatcgtgtaaactcggaggtaaactcaattattgctaa 26201829  T
Q  294 aatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    |||||||| |||||||||||||||| |||||||||    
T  26201828 aatcggaatgtttgacgagtttgactcgagttaac 26201794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 329
Target Start/End: Complemental strand, 14732391 - 14732298
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||| |||||    
T  14732391 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaacttggtttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 14732298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 11735278 - 11735194
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac-cgagttaac 327  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||    
T  11735278 tttaggtcccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaatgtttgccgagtttgactcgagttaac 11735194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 35313561 - 35313654
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| ||||| |  ||||| |||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  35313561 tttacgtttttagatggcaaaaccgtgttaactcggaggtaaattcggtttttggtgaaatcggaaagtttgatgagtttgaccgagttaacac 35313654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 289
Target Start/End: Original strand, 33383083 - 33383178
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctg 289  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||||| ||||||||||||||||||| |||||| ||| |||||||| ||||||    
T  33383083 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtggtaactctgagataaactcggtttctg 33383178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 21067869 - 21067951
Alignment:
Q  274 gtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||| ||| ||||    
T  21067869 gtaaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 21067951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 21486154 - 21486266
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtg 343  Q
    ||||| || |||||||||||||||| | |||||||||||| || |||| ||||  ||| |||||| |||||||| ||||||||||||| |||||||||||    
T  21486154 tttagatatcaaaatcgtgttaacttgaaggtaaactcgaattttggtaaaattagaaggtttgatgagtttgatcgagttaacactcggtaaactcgtg 21486253  T
Q  344 taaaatcggccga 356  Q
    |||| ||| ||||    
T  21486254 taaactcgaccga 21486266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 255 - 347
Target Start/End: Original strand, 30823108 - 30823200
Alignment:
Q  255 aaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    ||||||||||||||| |||||||||||| ||||| || ||||||||| |||  ||||||||||  |||||||||||| |||||||||||||||    
T  30823108 aaatcgtgttaactctgaggtaaactcggtttctagtaaaatcggaaggttcaacgagtttgattgagttaacactcggtaaactcgtgtaaa 30823200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 19594237 - 19594307
Alignment:
Q  259 cgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||| |||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  19594237 cgtgtaaactaggagataaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 19594307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 318
Target Start/End: Original strand, 27148807 - 27148931
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| | |  |||||| | | ||||||| |||||||| |||||||||||||| |||||||||| ||| ||||| | | |    
T  27148807 aatgttccacaaatcgagtgttaactcgcaaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaaatcggaggtaacctcaatttcagctaa 27148906  T
Q  294 aatcggaaagtttgacgagtttgac 318  Q
    |||| ||| ||||||||||||||||    
T  27148907 aatcagaatgtttgacgagtttgac 27148931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 318
Target Start/End: Complemental strand, 33497181 - 33497107
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgac 318  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||| | |||| |||| ||||||||||||||||    
T  33497181 tttaagtatcaaaatcgtgtcaactcggaggtaaactcgatttctgataaaattggaatgtttgacgagtttgac 33497107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 362
Target Start/End: Complemental strand, 37915992 - 37915875
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||||||||||| | |||| ||| ||||||| |||||||||||||||| |||| |||||| | ||||||||         |||||||||||||||||    
T  37915992 tttacgtgtttaggtgctaaaagcgttttaactcagaggtaaactcgatttatggtaaaatcgaacagtttgac---------cgagttaacactcagta 37915902  T
Q  336 aactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||| |||| || |||||||||    
T  37915901 aactcgtgtgaaattgggcgagtttac 37915875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 38910508 - 38910578
Alignment:
Q  259 cgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||| |||||| |||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||||||    
T  38910508 cgtgtaaactcgaaggtaagctcggtttttggtgaaatcggaaagtttgacgagattgaccgagttaacac 38910578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 47067185 - 47067271
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    |||||||||| ||| |||| |||||||||||| |||| | || |||| ||||||||||| |||||||||||| ||||||||||||||    
T  47067185 gtgttaactctgagataaaatcgatttctggtaaaattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 47067271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 6268513 - 6268598
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||  ||||| |||||||||||||| ||||||| | ||| |||||||||  ||| |||||||||||||||||||||||||||    
T  6268513 tttaggtgtcaaaaacgtgttaactcggatgtaaactaggtttttggtgaaattagaatgtttgacgagtttgaccgagttaacac 6268598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 329
Target Start/End: Original strand, 34656609 - 34656702
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||| |||||||   |||| ||||| || ||||| ||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||||    
T  34656609 tttacgtttttaggtggtaaaaacgtgtaaattcggaagtaaattcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 34656702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 1254537 - 1254471
Alignment:
Q  263 ttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||| ||| ||||||||||||||| |||||||||||||  |||||| ||||||||||||||||||||    
T  1254537 ttaaatcgaaggtaaactcgatttttggtgaaatcggactgtttgatgagtttgaccgagttaacac 1254471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 309
Target Start/End: Complemental strand, 36415128 - 36415080
Alignment:
Q  261 tgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgac 309  Q
    ||||||||||||| |||||||||||| | ||||||||||||| ||||||    
T  36415128 tgttaactcggagataaactcgatttttagtgaaatcggaaaatttgac 36415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 329
Target Start/End: Original strand, 31174721 - 31174806
Alignment:
Q  244 tttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    |||||||  ||||||| |||||| ||||||||||| | | ||| || | ||||| ||| |||||||||||||||  ||||||||||    
T  31174721 tttaggtgtcaaaatcatgttaaatcggaggtaaaatagttttttgttcaaatcagaatgtttgacgagtttgagtgagttaacac 31174806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 194 - 346
Target Start/End: Original strand, 10935 - 11087
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||| | ||||||||| |||||||||||||||| |||||||| ||||||| |||| |    
T  10935 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggtaa 11034  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaa 346  Q
    ||| |||| |||| ||||||||||| |||||||||||| ||||||||||||||    
T  11035 aattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaa 11087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 15 - 193
Target Start/End: Original strand, 1143 - 1319
Alignment:
Q  15 aatacttgagagaagaactatttctattacttgagaggatactttgattcttgttttcttgcttggtttacaaatgacaagttcacccctttttatatag 114  Q
    |||| ||||||||| ||| ||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| | || |||| |||  |||||    
T  1143 aatatttgagagaataacaatttctatttcttgagaggatactttgattcttgtttgcttgcttgatttacaaatgacacgctctccccgttt--tatag 1240  T
Q  115 gctctaaaagagagttctagacacatcatatgataactttctacacacttcaagagagagttctatacacttctctcaa 193  Q
    |||| ||  |||| |||||||||||||||   |||||||| |||||||||||||| || |||||| |||||||||||||    
T  1241 gctccaagggagatttctagacacatcattgtataactttatacacacttcaagatagtgttctacacacttctctcaa 1319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 356
Target Start/End: Complemental strand, 57855 - 57693
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||| ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||||||| ||||| || |    
T  57855 aatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaa 57756  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    |||| ||| |||| | ||||||||  |||||||||||| ||||||||||||||| ||| ||||    
T  57755 aatcagaaggtttaatgagtttgattgagttaacactcggtaaactcgtgtaaactcgaccga 57693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 194 - 331
Target Start/End: Original strand, 89242 - 89379
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||||||||||||||||||| ||  ||||||| | | |||| || |||||||||||| |||||||||||| | |||||||||||||||||||| |    
T  89242 aatgttccgtaaatcgagtgttaactctgtgagtttatcgagtttaagtttttaggtaccaatatcgtgttaacttgaaggtaaactcgatttctggtaa 89341  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactc 331  Q
    ||| |||| ||||||||||||||| |||||||||||||    
T  89342 aattggaaggtttgacgagtttgatcgagttaacactc 89379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 356
Target Start/End: Complemental strand, 39416 - 39264
Alignment:
Q  204 aaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaag 303  Q
    ||||||||||||||| ||||||| ||||| | ||||||| |||||||||||||||||||||||| | ||||| |||||| |||||||| |||||| || |    
T  39416 aaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaaccctgaggtcaactcggtttctggtaaaatcgaaagg 39317  T
Q  304 tttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccga 356  Q
    ||||||||||||||| |||||| ||||   |||||||||||||| ||| ||||    
T  39316 tttgacgagtttgactgagttagcacttgataaactcgtgtaaactcgaccga 39264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 194 - 331
Target Start/End: Original strand, 1277 - 1414
Alignment:
Q  194 aatgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtga 293  Q
    ||||||||  ||||||||||||||| ||||||| ||||| | ||||||| ||||||||| |||||||||||||||| |||||||| ||| ||||| || |    
T  1277 aatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttcttgtaa 1376  T
Q  294 aatcggaaagtttgacgagtttgaccgagttaacactc 331  Q
    ||| |||| |||| ||||||||||| ||||||||||||    
T  1377 aattggaaggtttaacgagtttgactgagttaacactc 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 1727 - 1796
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacac 329  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1727 gtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 1796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 307
Target Start/End: Original strand, 8829 - 8931
Alignment:
Q  196 tgttccgtaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaa 295  Q
    ||||||||||||||||||||||| ||||||||||||          |||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  8829 tgttccgtaaatcgagtgttaactctccgagtttaca---------tgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaa 8919  T
Q  296 tcggaaagtttg 307  Q
    |||||| |||||    
T  8920 tcggaaggtttg 8931  T

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Target: scaffold0246 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 236 - 352
Target Start/End: Original strand, 1371 - 1487
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagta 335  Q
    ||||||| |||||||  ||||| | |||||||| ||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||    ||    
T  1371 tttacgtttttaggtggcaaaaacatgttaacttggaggtaaactcggtttttagtgaaatcggaaagtttgacgagtttaaccgagttaacacgtgtta 1470  T
Q  336 aactcgtgtaaaatcgg 352  Q
    |||||||||||| ||||    
T  1471 aactcgtgtaaactcgg 1487  T

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Target: scaffold0246; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 25697 - 25642
Alignment:
Q  236 tttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt 291  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||| ||| ||||    
T  25697 tttacgtttttaggtggcaaaaacgtgttaactcggaggtaaactcggtttttggt 25642  T

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Target: scaffold0383 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 16754 - 16667
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||||| |||||||||||| |||||||| |||||| || |||| ||||||||||| |||||||||||  ||||||||| |||||    
T  16754 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgggtaaa 16667  T

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Target: scaffold0152 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 20990 - 20903
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||||| |||||||||||| |||||||| |||||| || |||| ||||||||||| |||||||||||  ||||||||| |||||    
T  20990 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgggtaaa 20903  T

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Target: scaffold0152; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 260 - 347
Target Start/End: Original strand, 28811 - 28898
Alignment:
Q  260 gtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaa 347  Q
    |||||||||| |||||||||||| |||||||| |||||| || |||| ||||||||||| |||||||||||  ||||||||| |||||    
T  28811 gtgttaactctgaggtaaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcgggtaaa 28898  T

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Target: scaffold0347 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 254 - 346
Target Start/End: Original strand, 15132 - 15228
Alignment:
Q  254 aaaatcgtgttaactcggaggtaaactcgatttctggtgaaatcggaaagtttgacgagtttgaccgag----ttaacactcagtaaactcgtgtaa 346  Q
    |||||||||||||||| |||||||| ||| ||| |||| |||| |||| |||| ||||||||||| |||    ||||||||||||||||||||||||    
T  15132 aaaatcgtgttaactctgaggtaaaatcggtttatggtaaaattggaaggtttaacgagtttgactgagttaattaacactcagtaaactcgtgtaa 15228  T

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Target: scaffold0263 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 362
Target Start/End: Complemental strand, 489 - 439
Alignment:
Q  312 gtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 362  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  489 gtttgaccgagttaacactcactaaactcgtgtaaaatcgggcgagtttac 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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