View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9027_high_14 (Length: 280)
Name: NF9027_high_14
Description: NF9027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9027_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 36203334 - 36203080
Alignment:
| Q |
18 |
gccaccgccaaaacaaacacgtactaaccaagtctctttcttataacaataaataataaatattattttaggtacagtaacaatgagtttgttaaagtgg |
117 |
Q |
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| T |
36203334 |
gccactgccaaaacaaacatgtactaaccaagtttctttcttataacaataaataataaattttattttaggtacagtaacgatgagtttgttaaaatgg |
36203235 |
T |
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| Q |
118 |
taagagacttagataacttaaacaagtgatcatagatttggtcacgacttttgtctatgaagaaaactctactgagattagagaacctatcgtatataaa |
217 |
Q |
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| T |
36203234 |
taagagacttagataacttaaacaaatgattataggtttggtcacgacttttgtccatggaaaaaactctactgagattagagaacctatcgtatataaa |
36203135 |
T |
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| Q |
218 |
taacttggataatttgacataaaacattatgatcatatggttggactctctgctt |
272 |
Q |
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| T |
36203134 |
taacttgaataatttaacataaaacattatgatcatatggttggactttctgctt |
36203080 |
T |
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