View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9027_low_2 (Length: 938)

Name: NF9027_low_2
Description: NF9027
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9027_low_2
NF9027_low_2
[»] chr5 (34 HSPs)
chr5 (371-921)||(1729833-1730383)
chr5 (16-228)||(30797136-30797348)
chr5 (16-228)||(9609840-9610052)
chr5 (16-228)||(29242446-29242657)
chr5 (17-210)||(27452808-27453001)
chr5 (17-138)||(1721650-1721771)
chr5 (228-278)||(4047547-4047597)
chr5 (226-275)||(3398353-3398402)
chr5 (226-279)||(30839914-30839967)
chr5 (226-276)||(36597712-36597762)
chr5 (228-273)||(2795658-2795703)
chr5 (223-271)||(32019984-32020032)
chr5 (274-341)||(1729734-1729802)
chr5 (226-269)||(30893762-30893805)
chr5 (228-274)||(8103577-8103623)
chr5 (228-274)||(11636866-11636912)
chr5 (228-270)||(14466495-14466537)
chr5 (226-274)||(6863689-6863737)
chr5 (228-276)||(31365945-31365993)
chr5 (17-173)||(39860597-39860753)
chr5 (228-271)||(12641993-12642036)
chr5 (228-270)||(41350337-41350379)
chr5 (226-276)||(42239586-42239635)
chr5 (226-271)||(23995416-23995461)
chr5 (226-275)||(34578144-34578193)
chr5 (226-279)||(35469687-35469740)
chr5 (226-271)||(40980506-40980551)
chr5 (227-275)||(14695109-14695157)
chr5 (226-270)||(29855898-29855942)
chr5 (223-269)||(31567493-31567539)
chr5 (226-272)||(35151352-35151398)
chr5 (228-273)||(13515924-13515969)
chr5 (226-271)||(15240950-15240995)
chr5 (235-272)||(29766309-29766346)
[»] chr7 (58 HSPs)
chr7 (16-228)||(3962632-3962844)
chr7 (16-228)||(25611701-25611913)
chr7 (16-228)||(23361878-23362090)
chr7 (18-228)||(30466257-30466467)
chr7 (17-151)||(27566350-27566484)
chr7 (17-228)||(42851554-42851765)
chr7 (17-186)||(4595369-4595538)
chr7 (17-184)||(9360376-9360542)
chr7 (17-138)||(40187037-40187158)
chr7 (19-180)||(5865871-5866030)
chr7 (226-272)||(8091311-8091357)
chr7 (17-123)||(24268061-24268167)
chr7 (226-274)||(4969906-4969954)
chr7 (228-276)||(8595032-8595080)
chr7 (226-273)||(820539-820586)
chr7 (228-275)||(9332096-9332143)
chr7 (226-273)||(39757108-39757155)
chr7 (226-276)||(46290143-46290193)
chr7 (228-273)||(3561876-3561921)
chr7 (226-271)||(25709399-25709444)
chr7 (228-276)||(7040247-7040295)
chr7 (226-274)||(24462952-24463000)
chr7 (226-278)||(33343121-33343173)
chr7 (228-275)||(7170137-7170184)
chr7 (228-279)||(12085923-12085974)
chr7 (228-275)||(19889475-19889522)
chr7 (223-270)||(26050462-26050509)
chr7 (223-270)||(26059821-26059868)
chr7 (228-275)||(32117949-32117996)
chr7 (226-273)||(34270394-34270441)
chr7 (228-269)||(18102232-18102273)
chr7 (226-271)||(29398134-29398179)
chr7 (226-271)||(29692540-29692585)
chr7 (226-271)||(45501592-45501637)
chr7 (228-280)||(23982746-23982798)
chr7 (228-272)||(36548459-36548503)
chr7 (226-269)||(2443906-2443949)
chr7 (223-270)||(7899487-7899534)
chr7 (226-269)||(26037226-26037269)
chr7 (226-273)||(33072114-33072161)
chr7 (228-270)||(5833490-5833532)
chr7 (226-272)||(22041725-22041771)
chr7 (228-273)||(5909280-5909325)
chr7 (228-273)||(47457459-47457504)
chr7 (17-81)||(33336313-33336377)
chr7 (226-270)||(44473513-44473557)
chr7 (228-271)||(384431-384473)
chr7 (228-275)||(8170656-8170702)
chr7 (228-271)||(22334021-22334064)
chr7 (226-269)||(28323268-28323311)
chr7 (226-273)||(36032541-36032588)
chr7 (237-283)||(38798058-38798104)
chr7 (228-274)||(42750418-42750464)
chr7 (231-272)||(6587924-6587965)
chr7 (226-275)||(8561587-8561635)
chr7 (226-271)||(26300704-26300749)
chr7 (238-279)||(28061315-28061356)
chr7 (228-269)||(41331458-41331499)
[»] chr4 (61 HSPs)
chr4 (16-228)||(26429530-26429742)
chr4 (17-210)||(35852766-35852959)
chr4 (17-186)||(9034529-9034698)
chr4 (17-174)||(33845951-33846108)
chr4 (17-228)||(54552195-54552406)
chr4 (17-174)||(48446289-48446446)
chr4 (17-181)||(17424161-17424325)
chr4 (17-210)||(22359579-22359771)
chr4 (17-186)||(26006424-26006593)
chr4 (226-275)||(18882263-18882312)
chr4 (223-280)||(54495628-54495685)
chr4 (226-282)||(19468327-19468383)
chr4 (226-281)||(19450890-19450945)
chr4 (223-274)||(27362521-27362572)
chr4 (225-270)||(16667385-16667430)
chr4 (228-273)||(35999945-35999990)
chr4 (226-283)||(40049691-40049748)
chr4 (226-274)||(3085803-3085851)
chr4 (228-272)||(29190815-29190859)
chr4 (223-271)||(47326892-47326940)
chr4 (223-271)||(47341688-47341736)
chr4 (17-120)||(791642-791745)
chr4 (226-273)||(17409957-17410004)
chr4 (226-277)||(27019393-27019444)
chr4 (226-268)||(24684970-24685012)
chr4 (230-271)||(4779436-4779477)
chr4 (226-271)||(23545609-23545654)
chr4 (226-275)||(39876963-39877012)
chr4 (228-273)||(49228789-49228834)
chr4 (226-275)||(50352435-50352484)
chr4 (226-275)||(53376404-53376453)
chr4 (17-120)||(12273879-12273980)
chr4 (228-280)||(23051373-23051425)
chr4 (226-270)||(52391431-52391475)
chr4 (226-273)||(9759140-9759187)
chr4 (231-270)||(9971661-9971700)
chr4 (226-269)||(22130685-22130728)
chr4 (228-275)||(23553705-23553752)
chr4 (226-273)||(33632201-33632248)
chr4 (226-273)||(34941411-34941458)
chr4 (226-273)||(49181205-49181252)
chr4 (228-271)||(53961457-53961500)
chr4 (223-277)||(8736805-8736859)
chr4 (227-273)||(26471320-26471366)
chr4 (229-275)||(42479888-42479934)
chr4 (226-276)||(44916638-44916688)
chr4 (228-273)||(4329729-4329774)
chr4 (227-272)||(13214415-13214460)
chr4 (226-271)||(36971407-36971452)
chr4 (226-274)||(23438288-23438336)
chr4 (227-271)||(46803933-46803977)
chr4 (228-275)||(7349823-7349870)
chr4 (228-275)||(41415553-41415600)
chr4 (226-273)||(51691474-51691521)
chr4 (228-274)||(8919825-8919871)
chr4 (225-276)||(9326860-9326913)
chr4 (225-276)||(9373582-9373635)
chr4 (225-276)||(9381894-9381947)
chr4 (228-270)||(48910803-48910845)
chr4 (226-271)||(32279204-32279249)
chr4 (226-271)||(40682565-40682609)
[»] chr6 (38 HSPs)
chr6 (16-210)||(32957045-32957239)
chr6 (17-174)||(7607531-7607688)
chr6 (20-186)||(7435877-7436043)
chr6 (17-186)||(7597193-7597360)
chr6 (226-274)||(3261211-3261259)
chr6 (223-271)||(30591163-30591211)
chr6 (226-273)||(34692487-34692534)
chr6 (226-276)||(13391808-13391858)
chr6 (226-280)||(17552578-17552632)
chr6 (226-272)||(29863301-29863347)
chr6 (228-270)||(31069583-31069625)
chr6 (226-271)||(4371972-4372017)
chr6 (228-273)||(18332686-18332731)
chr6 (223-271)||(10887159-10887207)
chr6 (226-274)||(28943766-28943814)
chr6 (226-273)||(2830679-2830726)
chr6 (17-120)||(12523308-12523411)
chr6 (226-273)||(14228124-14228171)
chr6 (228-273)||(3853078-3853123)
chr6 (230-279)||(8467790-8467839)
chr6 (226-271)||(24979149-24979194)
chr6 (226-271)||(27819627-27819672)
chr6 (223-283)||(6016986-6017046)
chr6 (227-267)||(20979106-20979146)
chr6 (228-272)||(31568244-31568288)
chr6 (228-272)||(32614943-32614987)
chr6 (226-272)||(29065424-29065470)
chr6 (226-272)||(29120277-29120323)
chr6 (226-271)||(3484697-3484742)
chr6 (228-273)||(17596476-17596521)
chr6 (226-271)||(29074438-29074483)
chr6 (226-271)||(29079202-29079247)
chr6 (226-271)||(29107011-29107056)
chr6 (226-274)||(33017857-33017905)
chr6 (237-272)||(28470001-28470036)
chr6 (224-270)||(31790917-31790963)
chr6 (228-261)||(1017788-1017821)
chr6 (228-273)||(31169761-31169806)
[»] scaffold1351 (1 HSPs)
scaffold1351 (16-228)||(1738-1950)
[»] chr8 (57 HSPs)
chr8 (16-228)||(32577626-32577838)
chr8 (17-228)||(5839354-5839565)
chr8 (17-174)||(32283104-32283261)
chr8 (17-138)||(36530815-36530936)
chr8 (226-277)||(9580103-9580154)
chr8 (228-277)||(10129238-10129287)
chr8 (228-281)||(18567406-18567459)
chr8 (226-275)||(27874677-27874726)
chr8 (226-275)||(28014854-28014903)
chr8 (228-280)||(9801803-9801855)
chr8 (223-275)||(31812243-31812295)
chr8 (226-277)||(6818150-6818201)
chr8 (228-279)||(7140451-7140502)
chr8 (226-277)||(14961657-14961708)
chr8 (226-275)||(3306051-3306100)
chr8 (226-271)||(13496709-13496754)
chr8 (226-271)||(22838358-22838403)
chr8 (226-271)||(38212944-38212989)
chr8 (228-276)||(26682203-26682251)
chr8 (235-275)||(43717548-43717588)
chr8 (226-273)||(2161520-2161567)
chr8 (226-273)||(5573419-5573466)
chr8 (228-275)||(13327937-13327984)
chr8 (226-281)||(38843837-38843892)
chr8 (228-274)||(1203736-1203782)
chr8 (228-274)||(8284565-8284611)
chr8 (226-272)||(12189587-12189633)
chr8 (226-272)||(12434015-12434061)
chr8 (226-275)||(26363986-26364035)
chr8 (228-273)||(39024855-39024900)
chr8 (230-271)||(40225987-40226028)
chr8 (223-275)||(26834691-26834743)
chr8 (228-272)||(39701802-39701846)
chr8 (226-274)||(45006102-45006150)
chr8 (223-274)||(7978008-7978059)
chr8 (226-277)||(14391571-14391622)
chr8 (227-270)||(34107171-34107214)
chr8 (228-278)||(4080387-4080437)
chr8 (228-278)||(4084536-4084586)
chr8 (228-278)||(4102843-4102893)
chr8 (228-278)||(12132118-12132168)
chr8 (228-274)||(35678272-35678318)
chr8 (226-264)||(36967077-36967115)
chr8 (226-279)||(12958633-12958686)
chr8 (228-273)||(14816124-14816169)
chr8 (228-273)||(14829571-14829616)
chr8 (226-271)||(16445736-16445781)
chr8 (226-275)||(32089462-32089511)
chr8 (240-276)||(24993521-24993557)
chr8 (228-273)||(34405060-34405109)
chr8 (226-270)||(41979875-41979919)
chr8 (238-273)||(15198898-15198933)
chr8 (223-274)||(20514763-20514814)
chr8 (228-271)||(31263034-31263077)
chr8 (228-274)||(19343833-19343879)
chr8 (223-273)||(29642733-29642783)
chr8 (226-263)||(2083077-2083114)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-228)||(186715-186927)
[»] chr3 (44 HSPs)
chr3 (17-228)||(55218985-55219196)
chr3 (17-210)||(51192211-51192404)
chr3 (17-228)||(21689329-21689539)
chr3 (17-228)||(43018694-43018905)
chr3 (226-277)||(50204536-50204587)
chr3 (223-277)||(23523076-23523130)
chr3 (226-279)||(10307899-10307952)
chr3 (223-275)||(38389577-38389629)
chr3 (228-279)||(11611111-11611162)
chr3 (228-278)||(16875018-16875068)
chr3 (226-275)||(2571401-2571450)
chr3 (228-273)||(3863464-3863509)
chr3 (228-273)||(32553501-32553546)
chr3 (226-271)||(35414809-35414854)
chr3 (223-272)||(36426408-36426457)
chr3 (226-271)||(40930184-40930229)
chr3 (226-270)||(8165779-8165823)
chr3 (226-274)||(51618180-51618228)
chr3 (226-281)||(2566615-2566670)
chr3 (228-283)||(20938192-20938247)
chr3 (228-270)||(41151768-41151810)
chr3 (226-288)||(42180185-42180247)
chr3 (228-273)||(29686455-29686500)
chr3 (230-271)||(33474473-33474514)
chr3 (226-275)||(45983639-45983688)
chr3 (226-274)||(51401573-51401621)
chr3 (226-282)||(54527695-54527751)
chr3 (28-123)||(13443844-13443939)
chr3 (226-276)||(12515469-12515519)
chr3 (226-268)||(23803049-23803091)
chr3 (228-270)||(40497182-40497224)
chr3 (223-276)||(23638044-23638097)
chr3 (229-270)||(31318777-31318818)
chr3 (226-274)||(25633131-25633179)
chr3 (226-270)||(37055367-37055411)
chr3 (228-267)||(11611049-11611088)
chr3 (228-271)||(13495429-13495472)
chr3 (228-271)||(46492343-46492386)
chr3 (227-270)||(46845144-46845187)
chr3 (237-279)||(13495286-13495328)
chr3 (227-277)||(25513886-25513936)
chr3 (230-271)||(15269160-15269201)
chr3 (226-271)||(15862902-15862947)
chr3 (237-270)||(51567821-51567854)
[»] scaffold0577 (1 HSPs)
scaffold0577 (17-228)||(2538-2749)
[»] scaffold0011 (2 HSPs)
scaffold0011 (19-186)||(58030-58197)
scaffold0011 (226-272)||(13218-13264)
[»] chr2 (51 HSPs)
chr2 (17-172)||(38452031-38452186)
chr2 (17-186)||(23770114-23770283)
chr2 (66-228)||(24477844-24478006)
chr2 (17-93)||(23408086-23408162)
chr2 (31-177)||(10213459-10213604)
chr2 (223-282)||(36731310-36731369)
chr2 (226-276)||(8065256-8065306)
chr2 (226-274)||(7757783-7757831)
chr2 (226-273)||(9747450-9747497)
chr2 (228-275)||(16126555-16126602)
chr2 (228-271)||(20566017-20566060)
chr2 (228-274)||(6109524-6109570)
chr2 (226-275)||(24729573-24729622)
chr2 (229-274)||(29142210-29142255)
chr2 (229-274)||(34817881-34817926)
chr2 (226-275)||(38248416-38248465)
chr2 (228-276)||(27665039-27665087)
chr2 (226-278)||(29157822-29157874)
chr2 (227-275)||(43388477-43388525)
chr2 (228-275)||(12016801-12016848)
chr2 (226-269)||(26003348-26003391)
chr2 (228-278)||(9450392-9450442)
chr2 (226-275)||(5583554-5583603)
chr2 (230-271)||(5853463-5853504)
chr2 (230-271)||(16493532-16493573)
chr2 (228-269)||(19228560-19228601)
chr2 (228-276)||(4821411-4821459)
chr2 (232-276)||(11660889-11660933)
chr2 (223-271)||(15231961-15232009)
chr2 (226-274)||(15411619-15411667)
chr2 (226-270)||(19183487-19183531)
chr2 (228-275)||(16123413-16123460)
chr2 (228-270)||(8770887-8770929)
chr2 (239-273)||(14707010-14707044)
chr2 (228-269)||(2060044-2060085)
chr2 (226-275)||(4576322-4576371)
chr2 (226-271)||(9895145-9895190)
chr2 (230-271)||(22704674-22704715)
chr2 (226-271)||(23932698-23932743)
chr2 (226-271)||(45062331-45062376)
chr2 (226-270)||(12919351-12919395)
chr2 (228-276)||(14377559-14377607)
chr2 (226-274)||(17265537-17265585)
chr2 (226-270)||(34213950-34213994)
chr2 (227-270)||(6765134-6765177)
chr2 (229-276)||(7720251-7720298)
chr2 (228-283)||(35729252-35729307)
chr2 (226-273)||(43806493-43806540)
chr2 (235-273)||(6889780-6889818)
chr2 (232-274)||(25295850-25295892)
chr2 (228-277)||(16919148-16919197)
[»] scaffold0200 (1 HSPs)
scaffold0200 (17-174)||(27277-27434)
[»] scaffold0004 (1 HSPs)
scaffold0004 (17-210)||(216072-216262)
[»] chr1 (54 HSPs)
chr1 (223-273)||(34802097-34802147)
chr1 (226-275)||(35512858-35512907)
chr1 (226-274)||(6180319-6180367)
chr1 (223-275)||(30172009-30172061)
chr1 (223-275)||(30187550-30187602)
chr1 (228-272)||(30288863-30288907)
chr1 (228-276)||(44918159-44918207)
chr1 (47-166)||(15302954-15303073)
chr1 (17-120)||(25071144-25071247)
chr1 (226-280)||(39310777-39310831)
chr1 (226-283)||(51382447-51382505)
chr1 (228-273)||(313884-313929)
chr1 (228-273)||(6569983-6570028)
chr1 (226-275)||(23576410-23576459)
chr1 (226-270)||(5875216-5875260)
chr1 (228-276)||(6307637-6307685)
chr1 (226-274)||(25465291-25465339)
chr1 (226-273)||(1502718-1502765)
chr1 (223-270)||(35438845-35438892)
chr1 (226-273)||(36490912-36490959)
chr1 (226-273)||(38812873-38812920)
chr1 (228-275)||(39150323-39150370)
chr1 (226-272)||(13322009-13322055)
chr1 (226-271)||(1366180-1366225)
chr1 (226-275)||(3168064-3168113)
chr1 (228-273)||(6754606-6754651)
chr1 (228-277)||(17919588-17919637)
chr1 (226-275)||(22167468-22167517)
chr1 (226-270)||(43317596-43317640)
chr1 (230-281)||(4607612-4607663)
chr1 (223-270)||(9516711-9516758)
chr1 (223-270)||(13241887-13241934)
chr1 (229-271)||(2222236-2222278)
chr1 (226-272)||(5879102-5879148)
chr1 (226-271)||(7519996-7520042)
chr1 (228-274)||(41624964-41625010)
chr1 (226-271)||(23591831-23591876)
chr1 (226-271)||(33048124-33048169)
chr1 (226-271)||(33673735-33673780)
chr1 (226-271)||(51920431-51920476)
chr1 (228-272)||(10896488-10896532)
chr1 (17-169)||(19956181-19956333)
chr1 (226-270)||(32201757-32201801)
chr1 (226-270)||(41676561-41676605)
chr1 (228-275)||(4249341-4249388)
chr1 (228-275)||(4249665-4249712)
chr1 (228-275)||(4249989-4250036)
chr1 (228-275)||(19066633-19066680)
chr1 (228-275)||(19114523-19114570)
chr1 (226-273)||(30362993-30363040)
chr1 (168-210)||(46091048-46091090)
chr1 (237-278)||(44013069-44013110)
chr1 (226-271)||(47355378-47355423)
chr1 (232-277)||(47990109-47990154)
[»] scaffold0111 (2 HSPs)
scaffold0111 (228-276)||(37109-37157)
scaffold0111 (226-271)||(41115-41160)
[»] scaffold0061 (1 HSPs)
scaffold0061 (228-273)||(52777-52822)
[»] scaffold0017 (1 HSPs)
scaffold0017 (228-273)||(145812-145857)
[»] scaffold0073 (1 HSPs)
scaffold0073 (228-276)||(16530-16578)
[»] scaffold0229 (1 HSPs)
scaffold0229 (226-271)||(24527-24572)
[»] scaffold0074 (1 HSPs)
scaffold0074 (226-271)||(45497-45542)
[»] scaffold0727 (1 HSPs)
scaffold0727 (228-275)||(5826-5873)
[»] scaffold0018 (1 HSPs)
scaffold0018 (228-275)||(182177-182224)
[»] scaffold0136 (1 HSPs)
scaffold0136 (227-269)||(1445-1487)
[»] scaffold0128 (1 HSPs)
scaffold0128 (226-272)||(44293-44339)
[»] scaffold0155 (1 HSPs)
scaffold0155 (228-273)||(3411-3456)
[»] scaffold0036 (1 HSPs)
scaffold0036 (226-271)||(94018-94063)
[»] scaffold0607 (1 HSPs)
scaffold0607 (164-223)||(5264-5323)
[»] scaffold0192 (1 HSPs)
scaffold0192 (228-270)||(13564-13606)
[»] scaffold0149 (1 HSPs)
scaffold0149 (225-270)||(22596-22641)
[»] scaffold0129 (1 HSPs)
scaffold0129 (244-273)||(13664-13693)
[»] scaffold0009 (1 HSPs)
scaffold0009 (225-270)||(191316-191361)


Alignment Details
Target: chr5 (Bit Score: 535; Significance: 0; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 371 - 921
Target Start/End: Original strand, 1729833 - 1730383
Alignment:
Q  371 ttagtttatctgaatcggttgaagtgaagttctaatccccgcccagcaacaaaaacaaaatatctctagtcaaaggattgtgaagatgaagtgagtttga 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1729833 ttagtttatctgaatcggttgaagtgaagttctaatccccgcccagcaacaaaaacaaaatatctctagtcaaaggattgtgaagatgaagtgagtttga 1729932  T
Q  471 aattttatccatcctctcatttcacgaacattctctacttttctttctacaatctcaaaaccaaacccttcaacaatttcaaatgttcttaaggagtagc 570  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1729933 aattttatccattctctcatttcacgaacattctctacttttctttccacaatctcaaaaccaaacccttcaacaatttcaaatgttcttaaggagtagc 1730032  T
Q  571 caaacatgaacggaagtggatacaccaaatccaaacaccaaccatgtctctgtctgtctcctcaccaggattactaactcttacccccatattcacaccc 670  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1730033 caaacatgaaccgaagtggatacaccaaatccaaacaccaaccatgtctctgtctgtctcctcaccaggattactaactcttacccccatattcacaccc 1730132  T
Q  671 acacccccctcttcactttcaatttctaagacacactccattaaaatcactgtttcatcttcactttcctcttcaacccatcaagatacctcaaattcct 770  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1730133 acacccccctcttcactttcaatttctaagacacactccattaaaatcactgtttcatcttcactttcctcttcaacccatcaagatacctcaaattcct 1730232  T
Q  771 ctccacaacaactcaacaacaataatcctaccaacaatgacagcaataaaactgtcactgttgttaaattcacctataacagagcatcaccttcaattag 870  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  1730233 ctccacaacaactcaacaacaataatcctaccaacaatgacagcaataaaactgtcactgttgttaaattcacctataacagagcatcaccttcaattcg 1730332  T
Q  871 atggcccaattcaaaactcactgatatgtacccttccacagacaccctttt 921  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1730333 atggcccaattcaaaactcactgatatgtacccttccacagacaccctttt 1730383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 30797136 - 30797348
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30797136 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccaagcttga 30797235  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30797236 gaaaaggacgcatcaacattacaagtaaatctaccgggacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccgaa 30797335  T
Q  216 tattctgaccatt 228  Q
    |||||||| ||||    
T  30797336 tattctgagcatt 30797348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 9609840 - 9610052
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9609840 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 9609939  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||||| ||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9609940 gaaaaggacgcatcaacattacaagtaaacctatcgggacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccgaa 9610039  T
Q  216 tattctgaccatt 228  Q
    |||||||| ||||    
T  9610040 tattctgagcatt 9610052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 5e-71
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 29242446 - 29242657
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||    
T  29242446 gacatcaagaagcggagtcatccattcagtcttggctaaaacaaagcgaccttcttcatctcgaatgcaaacaccaacaccgacc-gattccgagcttga 29242544  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||| | ||||||||||||||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||| |||||| ||| ||| | ||    
T  29242545 gaaaagggcgcatcaacattacaagtaaacctactgggacttggtttgatccacttcaaatcattcggggtggaaggattctgagggatagaatgtcgaa 29242644  T
Q  216 tattctgaccatt 228  Q
    |||| ||| ||||    
T  29242645 tattttgagcatt 29242657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 27452808 - 27453001
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||    
T  27452808 acatcaaggagcggagacatccattcagtcttggccaaaacataacgaccttcatcatctcaaatgcacacaccaatgccaacccgattccgagcttgag 27452907  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatg 210  Q
    ||||||||||||||||||||||  |||||||  || |||||||||||||||||||| | || ||||| || |  |||| ||||||| |||||||    
T  27452908 aaaaggacacatcaacattacatttaaatctgtcgggacttggtttaatccacttcgagtcgttcggagtagcgggatgttgagggataggatg 27453001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 1721771 - 1721650
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||  ||||||||||||||||| |||||||| ||| ||| |||||| ||||||||||| || ||| |||| || |||| |||| || ||||||    
T  1721771 acatcaaggattggagtcatccattcagttttggctaacacataacaaccttcatcatctcgaatacacacatcaattccgacccaattcagaacttgag 1721672  T
Q  117 aaaaggacacatcaacattaca 138  Q
    ||||| |  |||||||||||||    
T  1721671 aaaagaatgcatcaacattaca 1721650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 4047547 - 4047597
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4047547 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttttt 4047597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 3398353 - 3398402
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3398353 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 3398402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 30839914 - 30839967
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  30839914 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttttta 30839967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 36597712 - 36597762
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  36597712 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttt 36597762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 2795658 - 2795703
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  2795658 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 2795703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 32020032 - 32019984
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  32020032 accattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 32019984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 274 - 341
Target Start/End: Original strand, 1729734 - 1729802
Alignment:
Q  274 tttttatattcacaa-caatcacaataatgtaacaatannnnnnncattgattgaaactatgtcaattt 341  Q
    ||||||||||||||| ||||||||||||||||||||||       ||||||||||||||||||||||||    
T  1729734 tttttatattcacaaacaatcacaataatgtaacaatatttttttcattgattgaaactatgtcaattt 1729802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 30893762 - 30893805
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  30893762 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 30893805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 8103623 - 8103577
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8103623 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 8103577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 11636866 - 11636912
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  11636866 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 11636912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 14466537 - 14466495
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  14466537 tttaaacttcttaacatgtctaaatttgcacatgatagaaaaa 14466495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 6863689 - 6863737
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||||    
T  6863689 attttaaattttttaacatgtgcaaatttgcacatgatagaaaaaccct 6863737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 31365993 - 31365945
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  31365993 tttaaacttcttaacatgtacaaatttgcacatgatagaaaaactcttt 31365945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 39860753 - 39860597
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||| ||||||||||||||||| || || ||||  ||| || ||||||| ||||| |||||  | | |||||| || ||  ||||| |||| | ||    
T  39860753 acatcaagaagcggagtcatccattcggttttagctagcacataatgaccttcatcatcgcgaatatacataccaatgccgacttgattcagagcataag 39860654  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttca 173  Q
    |||||||  |||| ||||||||  |||| ||||| ||||||||||||| | ||||||    
T  39860653 aaaaggaatcatctacattacatttaaacctaccaagacttggtttaagctacttca 39860597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 12642036 - 12641993
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||| |||||||||||| ||||||||||    
T  12642036 tttaaacttcttaacatgtgcaaatttgcacattatagaaaaac 12641993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 41350337 - 41350379
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  41350337 tttaaacttcttaacatgtgcaaatttgcacatgataaaaaaa 41350379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 42239586 - 42239635
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    ||||||||||||| |||||| | ||||||||||||||||||||||||||||    
T  42239586 attttaaacttct-aacatgcgcaaatttgcacatgatagaaaaacccttt 42239635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 23995461 - 23995416
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||    
T  23995461 attttaaacttcttaacatgtacaaatttgcacataatagaaaaac 23995416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 34578144 - 34578193
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| ||||    
T  34578144 attttaaactttttaacatgtgcaaatttgcacatgataaaaaaatcctt 34578193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 35469687 - 35469740
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    |||||||| || |||||||||| |||||| |||||||||||||||| |||||||    
T  35469687 attttaaattttttaacatgtgcaaatttacacatgatagaaaaactcttttta 35469740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 40980506 - 40980551
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||    
T  40980506 attttaaactttttaatatgtgcaaatttgcacatgatagaaaaac 40980551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 14695157 - 14695109
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||||  ||||| ||||||||| ||||||||||    
T  14695157 ttttaaacttcttaacatgtgcgaattttcacatgatataaaaaccctt 14695109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 29855942 - 29855898
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||    
T  29855942 atttaaaacttcttaacatgtgcaaatttacacatgatagaaaaa 29855898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 31567539 - 31567493
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    ||||||||||| || |||||||||| ||||||||| |||||||||||    
T  31567539 accattttaaattttttaacatgtgcaaatttgcatatgatagaaaa 31567493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 35151352 - 35151398
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||| ||||||| || ||||||||||||||| ||||||||    
T  35151352 attttaaactttttaacatatgcaaatttgcacatgattgaaaaacc 35151398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 13515969 - 13515924
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||| || |||||||||| |||||| ||||||||||||||||||    
T  13515969 tttaaatttgttaacatgtgcaaatttacacatgatagaaaaaccc 13515924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 15240995 - 15240950
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||| ||||| |||||||||  |||||||||||||||||||||||    
T  15240995 attttgaactttttaacatgtacaaatttgcacatgatagaaaaac 15240950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 29766309 - 29766346
Alignment:
Q  235 ttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  29766309 ttcttaacatgtgcaaacttgcacatgatagaaaaacc 29766346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 3962632 - 3962844
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3962632 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatacaaacaccaataccaacccgattccgagcttga 3962731  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3962732 gaaaaggacgcatcaacattacaagtaaacctaccgggacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccgaa 3962831  T
Q  216 tattctgaccatt 228  Q
    |||||||| ||||    
T  3962832 tattctgagcatt 3962844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 25611701 - 25611913
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  25611701 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatcgcgaatacaaacaccaataccaacccgattccgagcttga 25611800  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||||| ||||||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  25611801 gaaaaggacgcatcaacattacaagtaaacctgccgggacttggtttaacccacttcaaatcattcggggtggaaggattttgagggctaggatgccgaa 25611900  T
Q  216 tattctgaccatt 228  Q
    |||||||| ||||    
T  25611901 tattctgagcatt 25611913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 23362090 - 23361878
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23362090 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 23361991  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||||  ||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||| | ||    
T  23361990 gaaaaggatgcatcaacattacaagtaaacctatcggaacttggtttaatccacttcaaatcattcgggatggaaggattctgaggactaggatgtcgaa 23361891  T
Q  216 tattctgaccatt 228  Q
    |||| ||| ||||    
T  23361890 tattttgagcatt 23361878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 18 - 228
Target Start/End: Complemental strand, 30466467 - 30466257
Alignment:
Q  18 catcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgaga 117  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  30466467 catcaaggagcggagtcatctattcagtcttggctaaaacaaagcgaccttcttcatctcgaatgcaaacaccaatactgacccgattccgagcttgaga 30466368  T
Q  118 aaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaata 217  Q
    | ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| | |||| |||||| |||||||   ||||    
T  30466367 agaggacacatcaacattacaagtaaacctaccgggacttggtttgatccacttcaaatcattcggggtggcaagattatgagggataggatgttgaata 30466268  T
Q  218 ttctgaccatt 228  Q
    |||||| ||||    
T  30466267 ttctgagcatt 30466257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 27566350 - 27566484
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27566350 acatcaaggagcggagtcatccattcagtcttggctaaaacaaagcgaccttcttcatctcgaatgcaaacactaataccaacccgattccgagcttgag 27566449  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccg 151  Q
    |||||||| ||||||||||||||||||| ||||||    
T  27566450 aaaaggacgcatcaacattacaagtaaacctaccg 27566484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 42851765 - 42851554
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||||  || ||| |||| |||||||||||||||| |||||||||| ||||||||||| || |||||||| ||||||||||||||||||| ||    
T  42851765 acatcaaggagcaaagacattcatttagtcttggctaaaacacaacgaccttcatcatctcgaatacacacaccaatgccaacccgattccgagcttcag 42851666  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaat 216  Q
    |||||||| |||||||||||||  ||||||| ||  |||||||||||||||||||||| ||||||||||| |  |||| |||| || ||||||| | |||    
T  42851665 aaaaggacgcatcaacattacatttaaatctgccaggacttggtttaatccacttcaagtcattcggggtagcgggatgttgaaggataggatgacgaat 42851566  T
Q  217 attctgaccatt 228  Q
    | ||||| ||||    
T  42851565 agtctgagcatt 42851554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 4595369 - 4595538
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||| |||||||||||||||||| |||||| || || |||| |||||| ||||||| ||||||||  |||||||||||||||||| ||    
T  4595369 acatcaaggagcggaggcatccattcagtcttggccaaaacataatgatcttcatcatcttgaatgcacacaccaatgtcaacccgattccgagcttcag 4595468  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggt 186  Q
    |||||||| |||||||||||||  |||||||||||||||||  |||||||||||| || |||||| ||||    
T  4595469 aaaaggacgcatcaacattacatttaaatctaccgagactttctttaatccactttaagtcattcagggt 4595538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 9360542 - 9360376
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||| ||||| ||||||||| || |||||  ||||| |||||||||| |||||||||||| | |||||||| | |||| ||||| |||||||||    
T  9360542 acatcaaggatcggagacatccattccgttttggccgaaacataacgaccttcatcatctcgaatgtacacaccaatgc-aacctgattctgagcttgag 9360444  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggg 184  Q
    |||||||| |||||||||||||  |||||||  || || ||||||||||||||||||| || ||||||    
T  9360443 aaaaggacgcatcaacattacatttaaatctgtcgggaattggtttaatccacttcaagtcgttcggg 9360376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 40187158 - 40187037
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||| |||||||| ||||||||| |||||| |||||||||| ||||||| |||||| |||||||| |||||||| | |||||||||||    
T  40187158 acatcaaggagcggagacatccatttagtcttggccaaaacataacgaccttcatcatctcaaatgcacacaccaatgccaacccggtcccgagcttgag 40187059  T
Q  117 aaaaggacacatcaacattaca 138  Q
    ||||| || ||||||| |||||    
T  40187058 aaaagaacgcatcaaccttaca 40187037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 5866030 - 5865871
Alignment:
Q  19 atcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgagaa 118  Q
    |||||||||| ||||||||||||| || |||||||| | | |||||||||| ||||||||||  || |||| |||  | ||||||||| |||||||||||    
T  5866030 atcaaggagcagagtcatccattctgttttggctaacaaataacgaccttcatcatctcgaa--cacacacaaatgtcgacccgattcagagcttgagaa 5865933  T
Q  119 aaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcatt 180  Q
    |||||| ||||||||| |||  |||| ||  |  |||||| |||||||||||||||||||||    
T  5865932 aaggacgcatcaacatcacatttaaacctttcaggacttgatttaatccacttcaaatcatt 5865871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 8091357 - 8091311
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8091357 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 8091311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 24268061 - 24268167
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||| ||| ||||||||||||||| | ||||||||||||||||||| ||| ||||||||||| || | |||||| || ||  |||||  ||||||||    
T  24268061 acatcaatgagtggagtcatccattcaattttggctaaaacaaaacgacattcatcatctcgaatacacataccaatgccgacatgattcaaagcttgag 24268160  T
Q  117 aaaagga 123  Q
    |||||||    
T  24268161 aaaagga 24268167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 4969906 - 4969954
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4969906 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 4969954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 8595032 - 8595080
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8595032 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaactcttt 8595080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 820586 - 820539
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  820586 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 820539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 9332096 - 9332143
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  9332096 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 9332143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 39757155 - 39757108
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  39757155 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 39757108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 46290143 - 46290193
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  46290143 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttt 46290193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 3561921 - 3561876
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  3561921 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 3561876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 25709444 - 25709399
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  25709444 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 25709399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 7040295 - 7040247
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  7040295 tttaaacttcttaacatgtgcaaatttgcacatgatataaaaacccttt 7040247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 24463000 - 24462952
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  24463000 attttaaacttcttaacatgtgcaaatttgcacatgatagaaataccct 24462952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 33343121 - 33343173
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  33343121 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccatttt 33343173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 7170137 - 7170184
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  7170137 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctt 7170184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 12085974 - 12085923
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  12085974 tttaaacttcttattatgtgcaaatttgcacatgatagaaaaacccttttta 12085923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 19889475 - 19889522
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  19889475 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctt 19889522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 26050509 - 26050462
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  26050509 accattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26050462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 26059868 - 26059821
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  26059868 accattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 26059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 32117949 - 32117996
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||    
T  32117949 tttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 32117996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 34270394 - 34270441
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  34270394 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 34270441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 18102273 - 18102232
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  18102273 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 18102232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 29398179 - 29398134
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  29398179 attttaaacttcttaacatgtgcaaatttgaacatgatagaaaaac 29398134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 29692585 - 29692540
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  29692585 attttaaacttcttaacatgtacaaatttgcacatgatagaaaaac 29692540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 45501592 - 45501637
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||    
T  45501592 attttaaacttcttaagatgtgcaaatttgcacatgatagaaaaac 45501637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 23982798 - 23982746
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttat 280  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||| ||||||    
T  23982798 tttaaatttcttaacgtgtgcaaatttgcacatgatagaaaaacccattttat 23982746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 36548503 - 36548459
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||||||||||||||||| |||||||||||||||| |||||||    
T  36548503 tttaaacttcttaacatgtgcaaatttgcacatgataaaaaaacc 36548459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 2443949 - 2443906
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  2443949 attttaaacttcttaacatgtgtaaatttgaatatgatagaaaa 2443906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Complemental strand, 7899534 - 7899487
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||    
T  7899534 accattttaaattttttaacatgtgcaaatttgcacatgatagaaaaa 7899487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 26037226 - 26037269
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  26037226 attttaaacttcttaacatctgcaaatttgcacatgatagaaaa 26037269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 33072114 - 33072161
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||| ||||||||||||  |||||||||||||||||||||||||    
T  33072114 attttaaatttcttaacatgtacaaatttgcacatgatagaaaaaccc 33072161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 5833490 - 5833532
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  5833490 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaa 5833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 22041771 - 22041725
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  22041771 attttgaacttcttaacaagtgcaaatttgcacatgatagaaaaacc 22041725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 5909325 - 5909280
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||||    
T  5909325 tttaaacttcttatcatgtgcaaatttacacatgatagaaaaaccc 5909280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 47457504 - 47457459
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||| || |||||||||| |||||||||||||||||||||||||    
T  47457504 tttaaattttttaacatgtgcaaatttgcacatgatagaaaaaccc 47457459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Original strand, 33336313 - 33336377
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaat 81  Q
    |||||||||||||||||||||||||   | || ||||| ||| |||||||||| |||||||||||    
T  33336313 acatcaaggagcggagtcatccatttgtttttagctaacacacaacgaccttcatcatctcgaat 33336377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 44473557 - 44473513
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||||  |||||||||||||||| |||||    
T  44473557 attttaaacttcttaacatgttcaaatttgcacatgataaaaaaa 44473513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 384473 - 384431
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||| ||||||||| |||||||||||||    
T  384473 tttaaacttcttaacatgtgcaaatttgca-atgatagaaaaac 384431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 8170656 - 8170702
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  8170656 tttaaactttttaacatgtgtaaatttgtacatgata-aaaaaccctt 8170702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 22334064 - 22334021
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||  ||||||||||||||| |||||||    
T  22334064 tttaaacttcttaacatgtacaaatttgcacatgattgaaaaac 22334021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 28323268 - 28323311
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    |||||||| || ||||||||||||||||| ||||||||||||||    
T  28323268 attttaaattttttaacatgtgtaaatttacacatgatagaaaa 28323311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 36032588 - 36032541
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||| ||||||||||||| |||||| ||||| ||||||||||||    
T  36032588 attttaaatttcttaacatgtgaaaattttcacataatagaaaaaccc 36032541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 237 - 283
Target Start/End: Complemental strand, 38798104 - 38798058
Alignment:
Q  237 cttaacatgtgtaaatttgcacatgatagaaaaaccctttttatatt 283  Q
    ||||||||||| ||||||||||||| |||||||| || |||||||||    
T  38798104 cttaacatgtgcaaatttgcacatgttagaaaaatccattttatatt 38798058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 42750418 - 42750464
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||||||||| || ||||||||| ||||||||||| ||||    
T  42750418 tttaaacttcttaacatatgcaaatttgcatatgatagaaaacccct 42750464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 231 - 272
Target Start/End: Original strand, 6587924 - 6587965
Alignment:
Q  231 aaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||| |||| ||||| ||||||||||||||||||||||||    
T  6587924 aaactttttaatatgtgcaaatttgcacatgatagaaaaacc 6587965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 8561587 - 8561635
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| |||||||||||  |||||||||||||||| ||||||||||    
T  8561587 attttaaacgtcttaacatgtc-aaatttgcacatgataaaaaaaccctt 8561635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 26300704 - 26300749
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||| |||||||||| ||||||| ||||||| |||||||    
T  26300704 attttaaactttttaacatgtgcaaatttgtacatgatggaaaaac 26300749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 238 - 279
Target Start/End: Complemental strand, 28061356 - 28061315
Alignment:
Q  238 ttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    |||||||||| ||||||||||||| |||||||| ||||||||    
T  28061356 ttaacatgtgcaaatttgcacatgttagaaaaatccttttta 28061315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 41331499 - 41331458
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    |||||| |||||| |||||| |||||||||||||||||||||    
T  41331499 tttaaatttcttatcatgtgcaaatttgcacatgatagaaaa 41331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 185; Significance: 1e-99; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 26429530 - 26429742
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26429530 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatcttgaatgcaaacaccaataccaacccgattccgagcttga 26429629  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||||| ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26429630 gaaaaggacgcatcaacattacaagtaaacctaccaggacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccgaa 26429729  T
Q  216 tattctgaccatt 228  Q
    |||||||| ||||    
T  26429730 tattctgagcatt 26429742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 35852959 - 35852766
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  35852959 acatcaatgagcggagtcatccattcagtcttggctaaaacaaagcgatctttttcatctcgaatgcaaacaccaataccgacctgattccgagcttgag 35852860  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatg 210  Q
    |||| ||| ||||||||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||| |||||| |||||| |||||||    
T  35852859 aaaatgacgcatcaacattacaagtaaacctattgagacttggtttgatccacttcaaatcattcggggtggcaggattctgagggataggatg 35852766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 9034698 - 9034529
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||| |||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||| ||||||||  ||||||||||| |||||||||    
T  9034698 acatcaaagagcggagacatccattcagtcttggccaaaacataacgaccttcctcatctcgaatgcacacaccaatgtcaacccgattctgagcttgag 9034599  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggt 186  Q
    |||||||| ||||||| |||||  ||||||||||| ||||||||||||||||||| || || ||||||||    
T  9034598 aaaaggacgcatcaacgttacatttaaatctaccgggacttggtttaatccactttaattcgttcggggt 9034529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 33846108 - 33845951
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||| |||||||||| ||||||| |||||| |||||| ||| |||||| ||||||| ||||||||  |||||||||||||||||||||    
T  33846108 acatcaaggagcggagacatccattcaatcttggccaaaacataacgacattcatcatcttgaatgcacacaccaatgacaacccgattccgagcttgag 33846009  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaa 174  Q
    |||||||| |||||||||||||  |||||||  |||||||||||||||||||||||||    
T  33846008 aaaaggacgcatcaacattacatttaaatctgtcgagacttggtttaatccacttcaa 33845951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 54552406 - 54552195
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||| |||||||||||| |||||||||||||| ||||| ||| |||||||||| ||||||||||| || |||||||| ||||| ||||||||||||||||    
T  54552406 acattaaggagcggagttatccattcagtcttcgctaacacataacgaccttcatcatctcgaatacacacaccaatgccaacacgattccgagcttgag 54552307  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaat 216  Q
    |||||| | |||||||||||||  ||||||| ||  |||||||||||||||||||||  ||||||||||| |  ||||  |||||| ||||||| | |||    
T  54552306 aaaaggccgcatcaacattacatttaaatctgccaggacttggtttaatccacttcatgtcattcggggtagcgggatgctgagggataggatgacgaat 54552207  T
Q  217 attctgaccatt 228  Q
    | ||||| ||||    
T  54552206 agtctgagcatt 54552195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 48446446 - 48446289
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||| |||| |||||||||| ||||||| |||||| |||||||||| |||||||||||||| | |||||| |||||||||||| |||||||||    
T  48446446 acatcaaggagaggagacatccattcaatcttggccaaaacataacgaccttcatcatctcgaatgcacataccaatgccaacccgattctgagcttgag 48446347  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaa 174  Q
    |||||||  |||||||||||||  |||||||  || ||||||||||||||||||||||    
T  48446346 aaaaggatgcatcaacattacatttaaatctgtcgggacttggtttaatccacttcaa 48446289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 17424161 - 17424325
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||||||||||||||||||||| |||||| | ||| | ||||||||||||||| |||| || ||||||||  | || |||||| |||||||||    
T  17424161 acatcaaggagcggagtcatccattcagttttggctgacacatatcgaccttcttcatcttgaatacacacaccaatgtcgactcgattcagagcttgag 17424260  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattc 181  Q
    |||| ||| |||||||||||||  |||| || ||| ||||||||||||||||||| |||||||||    
T  17424261 aaaatgacgcatcaacattacatttaaaccttccgggacttggtttaatccacttaaaatcattc 17424325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 22359579 - 22359771
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||| |||||||| || |||||||||| ||||||| |||||| ||| | |||  |||||||||||||| |||||||| |||||| |||||||||||||||    
T  22359579 acataaaggagcg-agacatccattcattcttggccaaaacataacaatctttatcatctcgaatgcacacaccaatgccaacctgattccgagcttgag 22359677  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatg 210  Q
    |||||||  |||||||||||||  |||||||  || ||||| |||||||||||||||| |||||||| || |  |||| ||||||| |||||||    
T  22359678 aaaaggaggcatcaacattacatttaaatctgtcgggactttgtttaatccacttcaagtcattcggcgtagcgggatgttgagggataggatg 22359771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 26006424 - 26006593
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||| | | ||| |||||||| ||||||| | |||||| ||| |||||| |||||||||||||| ||||||||  |||||||||||||| ||||||    
T  26006424 acatcaagaatcagagacatccattaagtcttgtccaaaacataacaaccttcatcatctcgaatgcacacaccaatgtcaacccgattccgaacttgag 26006523  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggt 186  Q
    |||| ||| |||||||||||||  |||||||  |  |||||||||||||| ||||||| || ||||||||    
T  26006524 aaaatgacgcatcaacattacatttaaatctgtcaggacttggtttaatctacttcaagtcgttcggggt 26006593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 18882312 - 18882263
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18882312 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 18882263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 54495685 - 54495628
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttat 280  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  54495685 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttattat 54495628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 19468327 - 19468383
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttatat 282  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  19468327 attttaaacttcttaacatgtgcaaatttgcacataatagaaaaaccctttatatat 19468383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 19450945 - 19450890
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttata 281  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  19450945 attttaaacttcttaacatgtgcaaatttgcacataatagaaaaacccattttata 19450890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 27362521 - 27362572
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  27362521 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 27362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 16667430 - 16667385
Alignment:
Q  225 cattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  16667430 cattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 16667385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 35999990 - 35999945
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  35999990 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 35999945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 40049691 - 40049748
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttatatt 283  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  40049691 attttaaatttcttaacatgtgcaaatttgcacataatagaaaaaccctttttttatt 40049748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 3085803 - 3085851
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  3085803 attttaaacttcttaaaatgtgcaaatttgcacatgatagaaaaaccct 3085851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 29190859 - 29190815
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  29190859 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 29190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 47326940 - 47326892
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  47326940 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 47326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 47341736 - 47341688
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  47341736 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 47341688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 791745 - 791642
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||||||||||||||||||||| ||  |||| | | |||||| ||| ||||||||||| || |||||||| || || | |||| ||||||| |    
T  791745 acatcaaggagcggagtcatccattcagttttaactaacaaataacgacattcatcatctcgaatacacacaccaatgccgactcaattcagagcttggg 791646  T
Q  117 aaaa 120  Q
    ||||    
T  791645 aaaa 791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 17409957 - 17410004
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17409957 attttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 17410004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 27019393 - 27019444
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||||    
T  27019393 attttaaactttttaacatatgcaaatttgcacatgatagaaaaaccctttt 27019444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 268
Target Start/End: Original strand, 24684970 - 24685012
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaa 268  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24684970 attttaaacttcttaacatgtgcaaatttgcacatgatagaaa 24685012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 4779477 - 4779436
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  4779477 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 4779436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 23545609 - 23545654
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||    
T  23545609 attttaaacttattaacatgtgcaaatttgcacatgatagaaaaac 23545654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 39876963 - 39877012
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||||    
T  39876963 attttaaatttcttaacatgtgcaaatttacacatgatagaaaaaccctt 39877012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 49228789 - 49228834
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||    
T  49228789 tttaaacttcttaacacgtgcaaatttgcacatgatagaaaaaccc 49228834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 50352435 - 50352484
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  50352435 attttaaatttcttaacatgtgcaaatttgcatatgatagaaaaaccctt 50352484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 53376453 - 53376404
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  53376453 attttaaacttcttaacatgtgcaaattttcacatgataaaaaaaccctt 53376404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 12273980 - 12273879
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||| ||| |||||| |||||||||||||| |||  | ||| ||||||| |||  | ||||||||  |||||||||||| | ||||||    
T  12273980 acatcaaggagcggagacattcattcaatcttggctaaaacataacaccattcatcatctcaaat--acacaccaatgtcaacccgattcctaacttgag 12273883  T
Q  117 aaaa 120  Q
    ||||    
T  12273882 aaaa 12273879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 23051425 - 23051373
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttat 280  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||||| ||||    
T  23051425 tttaaatttcttatcatgtgcaaatttgcacatgatagaaaaacccttattat 23051373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 52391431 - 52391475
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||||| |||||| |||||||||||||||    
T  52391431 attttaaacttcttaacatgtgcaaatttacacatgatagaaaaa 52391475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 9759187 - 9759140
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  9759187 attttaaatttcttaacatgtgcaaatttgtacatgatagaaaaaccc 9759140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 9971700 - 9971661
Alignment:
Q  231 aaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  9971700 aaacttcttaacatgtataaatttgcacatgatagaaaaa 9971661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 22130685 - 22130728
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||    
T  22130685 attttaaactttttaacatgtgtaaatttgcacataatagaaaa 22130728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 23553705 - 23553752
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  23553705 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaatcctt 23553752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 33632248 - 33632201
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  33632248 attttaaactttttaacatgtgcaaattcgcacatgatagaaaaaccc 33632201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 34941411 - 34941458
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||    
T  34941411 attttaaacttcttatcatgtgcaaattcgcacatgatagaaaaaccc 34941458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 49181205 - 49181252
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  49181205 attttgaacttcttaacaggtgcaaatttgcacatgatagaaaaaccc 49181252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 53961457 - 53961500
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  53961457 tttaaacttcttaacatgtgcaaatttgcacacgatagaaaaac 53961500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 8736859 - 8736805
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    |||| |||||| ||||||||||||| |||||| |||| |||||||||||||||||    
T  8736859 accactttaaatttcttaacatgtgcaaatttacacacgatagaaaaaccctttt 8736805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 26471320 - 26471366
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  26471320 ttttaaacttcttaatatgtgtaaatttgtacatgttagaaaaaccc 26471366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 42479934 - 42479888
Alignment:
Q  229 ttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||||    
T  42479934 ttaaatttcttaacatgtgcaaatttgcacatgatagaaaatccctt 42479888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 44916688 - 44916638
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||| || |||| ||||| ||||||||||||||||||||||||||||    
T  44916688 attttaaattttttaatatgtgcaaatttgcacatgatagaaaaacccttt 44916638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 4329729 - 4329774
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||| ||||||| || |||||||||||||||||||||||||    
T  4329729 tttaaactttttaacatatgcaaatttgcacatgatagaaaaaccc 4329774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 13214460 - 13214415
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||    
T  13214460 ttttgaacttcttaacatgtgcaaatttgcacataatagaaaaacc 13214415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 36971407 - 36971452
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||| ||||||||||| |||||||||||| ||||||||||||    
T  36971407 attttaaatttcttaacatgcgtaaatttgcacttgatagaaaaac 36971452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 23438288 - 23438336
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||| |||| |||||||| |||||||||||| |||||||||||||    
T  23438288 attttaaaattctcaacatgtgcaaatttgcacataatagaaaaaccct 23438336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 46803933 - 46803977
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||| |||| ||||| |||||||||||||||||||||||    
T  46803933 ttttaaactttttaatatgtgcaaatttgcacatgatagaaaaac 46803977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 7349823 - 7349870
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||||| |||||  |||||| ||||||||||||||||||||    
T  7349823 tttaaacttcttatcatgtacaaatttacacatgatagaaaaaccctt 7349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 41415600 - 41415553
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| ||| |||||| |||||||||||||||| ||||||||||    
T  41415600 tttaaacttattatcatgtgcaaatttgcacatgatataaaaaccctt 41415553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 51691474 - 51691521
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||| ||| ||||||||||||| |||||| ||||||||||||||||||    
T  51691474 atttaaaatttcttaacatgtgcaaatttacacatgatagaaaaaccc 51691521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 8919825 - 8919871
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8919825 tttaaacttcttatcatgtgtaaatttgtatttgatagaaaaaccct 8919871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 9326913 - 9326860
Alignment:
Q  225 cattttaaacttcttaacatgtgtaaa--tttgcacatgatagaaaaacccttt 276  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||| |||||||||    
T  9326913 cattttaaatttcttaacatgtgcaaatttttgcacatgatagagaaacccttt 9326860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 9373635 - 9373582
Alignment:
Q  225 cattttaaacttcttaacatgtgtaaa--tttgcacatgatagaaaaacccttt 276  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||| |||||||||    
T  9373635 cattttaaatttcttaacatgtgcaaatttttgcacatgatagagaaacccttt 9373582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 225 - 276
Target Start/End: Complemental strand, 9381947 - 9381894
Alignment:
Q  225 cattttaaacttcttaacatgtgtaaa--tttgcacatgatagaaaaacccttt 276  Q
    ||||||||| ||||||||||||| |||  ||||||||||||||| |||||||||    
T  9381947 cattttaaatttcttaacatgtgcaaatttttgcacatgatagagaaacccttt 9381894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 48910845 - 48910803
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||||||||| || ||||||||| ||||||||||||    
T  48910845 tttaaacttcttaacatatgcaaatttgcatatgatagaaaaa 48910803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 32279204 - 32279249
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||| |||||||||| |||||| ||||||||| ||||||    
T  32279204 attttaaactttttaacatgtgcaaatttacacatgataaaaaaac 32279249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 40682565 - 40682609
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||| ||||||||||||| ||| |||||||||||||||||||    
T  40682565 attttaaatttcttaacatgtgcaaa-ttgcacatgatagaaaaac 40682609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 4e-96; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 32957239 - 32957045
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32957239 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 32957140  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatg 210  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32957139 gaaaaggacgcatcaacattacaagtaaacctaccgggacttggtttaatccacttcaaatcattcggggtggaaggattctgagggctaggatg 32957045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 7607688 - 7607531
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||| |||| |||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  7607688 acatcaaggagtggagacatccattcagtcttggccaaaacataacgaccttcatcatctcgaatgcacacaccaatgccaacccaattccgagcttgag 7607589  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaa 174  Q
    |||||||| |||||||||||||  |||||||  || ||||||||||||||||||||||    
T  7607588 aaaaggacgcatcaacattacatttaaatctgtcgggacttggtttaatccacttcaa 7607531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 7435877 - 7436043
Alignment:
Q  20 tcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgagaaa 119  Q
    |||| |||||||| |||||||||||||||| | || ||| |||||||||| |||||||||||||| |||| ||| ||||||| ||||||||||||| |||    
T  7435877 tcaaagagcggagacatccattcagtcttgaccaatacataacgaccttcatcatctcgaatgcacacactaatgccaacccaattccgagcttgaaaaa 7435976  T
Q  120 aggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggt 186  Q
    ||||| |||||||||||||  ||||||| ||| |||||||||||||||||||||| || ||||||||    
T  7435977 aggacgcatcaacattacatttaaatctgccgggacttggtttaatccacttcaagtcgttcggggt 7436043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 17 - 186
Target Start/End: Complemental strand, 7597360 - 7597193
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtctt--ggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttg 114  Q
    |||||||||||||||| |||||||||||||||  ||| |||||| |||||||||| |||||    ||||| |||||||| ||||||| ||| |||||||     
T  7597360 acatcaaggagcggagacatccattcagtcttttggccaaaacataacgaccttcatcatc----atgcacacaccaatgccaacccaatttcgagctta 7597265  T
Q  115 agaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggt 186  Q
    |||||||||  |||||||||||||  ||||||||  | |||||||||||||||||||||| || ||||||||    
T  7597264 agaaaaggatgcatcaacattacatttaaatctattgtgacttggtttaatccacttcaagtcgttcggggt 7597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 3261211 - 3261259
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3261211 attttaaactttttaacatgtgtaaatttgcacatgatagaaaaaccct 3261259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 30591211 - 30591163
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30591211 accatttaaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 30591163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 34692487 - 34692534
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  34692487 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 34692534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 13391808 - 13391858
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  13391808 attttaaacttcttaacatgcgcaaatttgcacatgatagaaaaacccttt 13391858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 17552632 - 17552578
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttat 280  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  17552632 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttattat 17552578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 29863347 - 29863301
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  29863347 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 29863301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 31069625 - 31069583
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31069625 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 31069583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 4371972 - 4372017
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  4371972 attttaaacttcttaacatgtgtaaatttgcgcatgatagaaaaac 4372017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 18332731 - 18332686
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  18332731 tttaaacttcttaacatgtgaaaatttgcacatgatagaaaaaccc 18332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 10887159 - 10887207
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  10887159 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 10887207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 28943814 - 28943766
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  28943814 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccct 28943766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 2830726 - 2830679
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  2830726 attttaaacttcttaacatgtgcaaatttgtacatgatagaaaaaccc 2830679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 12523411 - 12523308
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||| | ||||||||||||||||  | ||||| | | |||||| ||| ||||||||||| || |||||||| || || |||||| |||||||||    
T  12523411 acatcaaggaacagagtcatccattcagttctagctaacaaataacgacattcatcatctcgaatacacacaccaatgccgactcgattcagagcttgag 12523312  T
Q  117 aaaa 120  Q
    ||||    
T  12523311 aaaa 12523308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 14228171 - 14228124
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  14228171 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 14228124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 3853078 - 3853123
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||    
T  3853078 tttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 3853123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 8467790 - 8467839
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  8467790 taaacttcttaacatgtacaaatttgcatatgatagaaaaacccttttta 8467839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 24979194 - 24979149
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||    
T  24979194 attttaaacatcttaacatgtgcaaatttgcacatgatagaaaaac 24979149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 27819672 - 27819627
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  27819672 attttaaacttcttaacatgtgcaaatttgtacatgatagaaaaac 27819627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 6016986 - 6017046
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttatatt 283  Q
    |||| ||||||||| |||||||||| |||||||||||||||||||||| ||| ||| ||||    
T  6016986 accactttaaactttttaacatgtgcaaatttgcacatgatagaaaaatcctatttgtatt 6017046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 20979106 - 20979146
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaa 267  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  20979106 ttttaaacttcttaacatgtgcaaatttgcacatgatagaa 20979146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 31568244 - 31568288
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  31568244 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaacc 31568288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 32614987 - 32614943
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||    
T  32614987 tttaaacttcttaacatgtgcaaatttgtacatgatagaaaaacc 32614943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 29065470 - 29065424
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||    
T  29065470 attttaaactttttaacatgtgcaagtttgcacatgatagaaaaacc 29065424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 29120323 - 29120277
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||    
T  29120323 attttaaactttttaacatgtgcaagtttgcacatgatagaaaaacc 29120277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 3484742 - 3484697
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||    
T  3484742 attttaaacttcttaacaaatgtaaatctgcacatgatagaaaaac 3484697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 17596476 - 17596521
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||| |||||  |||||||||||||||||||||||||    
T  17596476 tttaaacttcttatcatgtacaaatttgcacatgatagaaaaaccc 17596521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 29074483 - 29074438
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||    
T  29074483 attttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29074438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 29079247 - 29079202
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||    
T  29079247 attttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29079202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 29107056 - 29107011
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||| |||||||||| || ||||||||||||||||||||    
T  29107056 attttaaactttttaacatgtgcaagtttgcacatgatagaaaaac 29107011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 33017857 - 33017905
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||| || |||||||||| |||||||||||| |||||||||||||    
T  33017857 attttaaattttttaacatgtgcaaatttgcacataatagaaaaaccct 33017905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 237 - 272
Target Start/End: Original strand, 28470001 - 28470036
Alignment:
Q  237 cttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||| ||||||||||||||||||||||||    
T  28470001 cttaacatgtgcaaatttgcacatgatagaaaaacc 28470036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 31790963 - 31790917
Alignment:
Q  224 ccattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||| ||||||| ||||| ||||||||| ||||||||||||    
T  31790963 ccattttaaatttcttaatatgtgcaaatttgcatatgatagaaaaa 31790917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 1017821 - 1017788
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatg 261  Q
    ||||||||||||||||||||||||||| ||||||    
T  1017821 tttaaacttcttaacatgtgtaaatttacacatg 1017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 31169806 - 31169761
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||| || |||||||||| |||||| ||||||||||||||||||    
T  31169806 tttaaatttgttaacatgtgcaaatttacacatgatagaaaaaccc 31169761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 177; Significance: 6e-95; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 1738 - 1950
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  1738 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctagaatacaaaaaccaataccaacccgattccgagcttga 1837  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1838 gaaaaggacgcatcaacattacaagtaaacctactgggacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccgaa 1937  T
Q  216 tattctgaccatt 228  Q
    |||||||| ||||    
T  1938 tattctgagcatt 1950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 6e-95; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 32577838 - 32577626
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  32577838 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatcgcgaatacaaacaccaataccaacccgattccgagcttga 32577739  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    ||||||||| ||||||||||||||||||| || ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32577738 gaaaaggacgcatcaacattacaagtaaacctgccgggacttggtttaacccacttcaaatcattcggggtggaaggattttgagggctaggatgccgaa 32577639  T
Q  216 tattctgaccatt 228  Q
    |||||||| ||||    
T  32577638 tattctgagcatt 32577626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 5839565 - 5839354
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5839565 acatcaaggagcggagtcatccattccgtcttggctaaaacaaagcgaccttcttcatctcgaatgcaaacaccaataccgacccgattccgagcttgag 5839466  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaat 216  Q
    | |||||| ||||  ||||||||||||||||  || ||||| |||| ||||||||  ||||| ||||||||  |||||| |||||| ||||||  | |||    
T  5839465 agaaggacgcatcggcattacaagtaaatctgtcgggacttcgtttgatccactttcaatcaatcggggtgtcaggattctgagggataggatttcgaat 5839366  T
Q  217 attctgaccatt 228  Q
    ||||||| ||||    
T  5839365 attctgagcatt 5839354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 32283104 - 32283261
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||| ||| |||||||||||||||||| |||||| ||||| |||| |||||||||||||| ||||||||  |||||||||||||||||||||    
T  32283104 acatcaaggagcagagacatccattcagtcttggccaaaacataacgaacttcatcatctcgaatgcacacaccaatgtcaacccgattccgagcttgag 32283203  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaa 174  Q
    |||||||| |||||||||||||  |||||||  || |||||||||||||| |||||||    
T  32283204 aaaaggacgcatcaacattacatttaaatctgtcgggacttggtttaatcaacttcaa 32283261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 36530936 - 36530815
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| |||||| ||||||| ||| || ||| |||| |||||  |||||  || || |     
T  36530936 acatcaaggagcggagacatccattcagtcttggctaaaacataacaaccttcatcatctctaatacacacatcaatgccaacttgattcgaagttttat 36530837  T
Q  117 aaaaggacacatcaacattaca 138  Q
    |||||||| |||||||||||||    
T  36530836 aaaaggacgcatcaacattaca 36530815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 9580154 - 9580103
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9580154 attttaaacttcttaacatgtgtaaatttgcacatgataaaaaaaccctttt 9580103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 228 - 277
Target Start/End: Original strand, 10129238 - 10129287
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10129238 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctttt 10129287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 228 - 281
Target Start/End: Complemental strand, 18567459 - 18567406
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttata 281  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  18567459 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctatttata 18567406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 27874726 - 27874677
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27874726 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 27874677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 28014903 - 28014854
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28014903 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 28014854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 9801803 - 9801855
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttat 280  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  9801803 tttaaacttcttaacatgtgcaaatttgcacatgattgaaaaaccctttttat 9801855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 31812243 - 31812295
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  31812243 accattttaaacttcttaatatgtgcaaatttgcacatgatagaaaaaccctt 31812295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 6818150 - 6818201
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  6818150 attttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccctttt 6818201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 279
Target Start/End: Complemental strand, 7140502 - 7140451
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  7140502 tttaaacttcttaatatgtgcaaatttgcacatgatagaaaaacccttttta 7140451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 14961708 - 14961657
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  14961708 attttaaacttcttagcatgtgcaaatttgcacatgatagaaaaaccctttt 14961657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 3306100 - 3306051
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  3306100 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 3306051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 13496754 - 13496709
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  13496754 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 13496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 22838358 - 22838403
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  22838358 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 22838403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 38212989 - 38212944
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  38212989 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 38212944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 26682203 - 26682251
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26682203 tttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttt 26682251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 43717588 - 43717548
Alignment:
Q  235 ttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  43717588 ttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 43717548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 2161520 - 2161567
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  2161520 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 2161567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 5573419 - 5573466
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||    
T  5573419 attttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccc 5573466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 13327984 - 13327937
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||    
T  13327984 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaatcctt 13327937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 38843837 - 38843892
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttata 281  Q
    ||||||||||||||| |||||| |||||| |||||||||||||||||||| |||||    
T  38843837 attttaaacttcttagcatgtgcaaatttacacatgatagaaaaacccttcttata 38843892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 1203736 - 1203782
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||    
T  1203736 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccct 1203782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 8284611 - 8284565
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||    
T  8284611 tttaaacttcttaacatgtacaaatttgcacatgatagaaaaaccct 8284565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 12189633 - 12189587
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  12189633 attttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 12189587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 12434061 - 12434015
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  12434061 attttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacc 12434015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 26364035 - 26363986
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||| | |||||||||||||||||||||||||||    
T  26364035 attttaaatttcttaacatgcgcaaatttgcacatgatagaaaaaccctt 26363986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 39024900 - 39024855
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  39024900 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 39024855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 40226028 - 40225987
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  40226028 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 40225987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 26834691 - 26834743
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||| ||||||| || || |||||||||||||||||||||||||||    
T  26834691 accattttaaatttcttaatatatgcaaatttgcacatgatagaaaaaccctt 26834743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 39701846 - 39701802
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  39701846 tttaaacttgttaacatgtgcaaatttgcacatgatagaaaaacc 39701802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 45006102 - 45006150
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  45006102 attttaaacttcttaacatgtgcaaatttgcttatgatagaaaaaccct 45006150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 7978008 - 7978059
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||| ||||||| || ||||||||| ||||||||||||||||    
T  7978008 accattttaaactttttaacatttgcaaatttgcatatgatagaaaaaccct 7978059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 14391622 - 14391571
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    |||||||||||||||||||||| ||||||| |||| ||||||||| ||||||    
T  14391622 attttaaacttcttaacatgtgcaaatttggacatcatagaaaaatcctttt 14391571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 34107214 - 34107171
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  34107214 ttttaaacttcttaacatatgtaaatttgcatatgatagaaaaa 34107171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 4080437 - 4080387
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||||| |||||| |||||| |||||||||||||||||||||| |||||||    
T  4080437 tttaaatttcttatcatgtgcaaatttgcacatgatagaaaaatccttttt 4080387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 4084586 - 4084536
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||||| |||||| |||||| |||||||||||||||||||||| |||||||    
T  4084586 tttaaatttcttatcatgtgcaaatttgcacatgatagaaaaatccttttt 4084536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 4102893 - 4102843
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||||| |||||| |||||| |||||||||||||||||||||| |||||||    
T  4102893 tttaaatttcttatcatgtgcaaatttgcacatgatagaaaaatccttttt 4102843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 12132118 - 12132168
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||||| ||||||||||||| || |||||| ||||||||||||||||||||    
T  12132118 tttaaatttcttaacatgtgcaagtttgcagatgatagaaaaacccttttt 12132168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 35678318 - 35678272
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||    
T  35678318 tttaaacttcttatcatgtgcaaatttgcacatgataaaaaaaccct 35678272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 264
Target Start/End: Complemental strand, 36967115 - 36967077
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgata 264  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  36967115 attttaaacttcttaacatgtgcaaatttgcacatgata 36967077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 12958633 - 12958686
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    ||||||| |||||||| ||||  ||||||||||||||||||||||||| |||||    
T  12958633 attttaagcttcttaatatgtacaaatttgcacatgatagaaaaacccatttta 12958686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 14816169 - 14816124
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||    
T  14816169 tttaaatttcttatcatgtgcaaatttgcacatgatagaaaaaccc 14816124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 14829571 - 14829616
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||    
T  14829571 tttaaatttcttatcatgtgcaaatttgcacatgatagaaaaaccc 14829616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 16445781 - 16445736
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||||    
T  16445781 attttaaacttcttaatatgtgcaaatttgcacataatagaaaaac 16445736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 32089511 - 32089462
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||| ||||||||||| ||||||||| || ||||||||||||||    
T  32089511 attttaaactgcttaacatgtgcaaatttgcatataatagaaaaaccctt 32089462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 240 - 276
Target Start/End: Original strand, 24993521 - 24993557
Alignment:
Q  240 aacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||||||||||||||| ||||    
T  24993521 aacatgtgtaaatttgcacatgatagaaaaactcttt 24993557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 34405109 - 34405060
Alignment:
Q  228 tttaaacttcttaacatgtg----taaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||||    
T  34405109 tttaaacttcttaacatgtgcaaataaatttgcacatgatagaaaaaccc 34405060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 41979919 - 41979875
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||||    
T  41979919 attttaaatttcttaatatgtgtaaatttgcacaggatagaaaaa 41979875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 238 - 273
Target Start/End: Complemental strand, 15198933 - 15198898
Alignment:
Q  238 ttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||| |||||||||||||||||||||||||    
T  15198933 ttaacatgtgcaaatttgcacatgatagaaaaaccc 15198898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 20514763 - 20514814
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||| |||||||| |||| |||| |||||||||||||||| ||||    
T  20514763 accattttaaatttcttaacctgtgcaaatatgcacatgatagaaaacccct 20514814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 31263034 - 31263077
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||| ||||||||||| ||||||||| |||||||||||||    
T  31263034 tttaaactacttaacatgtgcaaatttgcatatgatagaaaaac 31263077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 274
Target Start/End: Complemental strand, 19343879 - 19343833
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||| | |||||||||| |||||||||||||||| |||||||||    
T  19343879 tttaaacgtgttaacatgtgcaaatttgcacatgataaaaaaaccct 19343833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 29642733 - 29642783
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||| | |||| ||| || |||||||||||||||||||||||||    
T  29642733 accattttaaattccttatcatatgcaaatttgcacatgatagaaaaaccc 29642783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 2083114 - 2083077
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgat 263  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  2083114 attttgaacttcttaagatgtgtaaatttgcacatgat 2083077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 173; Significance: 2e-92; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 173; E-Value: 2e-92
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 186927 - 186715
Alignment:
Q  16 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  186927 gacatcaaggagcggagtcatccattcagtcttggctaaaacaaaacaaccttcttcatctcgaatgcaaacaccaataccaacccgattctgagcttga 186828  T
Q  116 gaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 215  Q
    || |||||| ||||||||||||| ||||| || ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  186827 gacaaggacgcatcaacattacaggtaaacctgccgggacttggtttaacccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaa 186728  T
Q  216 tattctgaccatt 228  Q
    |||||||| ||||    
T  186727 tattctgagcatt 186715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 3e-75; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 17 - 228
Target Start/End: Original strand, 55218985 - 55219196
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  55218985 acatcaaggagcggagtcatccattcagtcttggctaaaacaaagcgaccttcttcatctcgaatgcaaacaccaataccgacccgattccgagcttgag 55219084  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaat 216  Q
    | ||||||  |||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||  |||||| |||||| || |||| | |||    
T  55219085 agaaggacgtatcaacattacaagtaaacctgccgggacttggtttgatccacttcaaatcattcggggtgtcaggattctgagggataagatgtcgaat 55219184  T
Q  217 attctgaccatt 228  Q
    ||||||| ||||    
T  55219185 attctgagcatt 55219196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 51192211 - 51192404
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||| |||||||| |||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||| ||||||| ||||||||||||||    
T  51192211 acatcaaagagcggagacatccattcagtcttggccaaaacataacgaccttcatcatctcgaatgcacacaccaatgccaacccaattccgagcttgag 51192310  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatg 210  Q
    |||||||| |||||||||||||  ||||||| ||| |||||||||||||||||||||| || |||| ||| |  |||| ||||||| |||||||    
T  51192311 aaaaggacgcatcaacattacatttaaatctgccgggacttggtttaatccacttcaagtcgttcgaggtagcgggatgttgagggataggatg 51192404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 21689539 - 21689329
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||| ||| ||||  |||||||||||||||||||||    
T  21689539 acatcaaggagcggagtcatccattcaatcttggctaaaacatatcgaccttcatcatctcgaatgcacaca-caatgtcaacccgattccgagcttgag 21689441  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaat 216  Q
    |||||||| ||||||||||||  ||||| || ||   |||||||||| |||||||||||||||||||||| |  |||| |||| || |||| || |||||    
T  21689440 aaaaggacgcatcaacattacttgtaaacctgccagtacttggtttagtccacttcaaatcattcggggtagtgggatgttgatggataggctgacaaat 21689341  T
Q  217 attctgaccatt 228  Q
    | ||||| ||||    
T  21689340 agtctgagcatt 21689329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 17 - 228
Target Start/End: Original strand, 43018694 - 43018905
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||| || ||||||||  |||||||||||||||||| ||    
T  43018694 acatcaaggagcggagacatccattcagtcttagctaaaacataacgaccttcatcatctcgaatacacacaccaatgtcaacccgattccgagcttcag 43018793  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaat 216  Q
    |||||||| |||||||||||||  | ||| | ||  |||||||||||||||||||||| || |||||||| |  |||| |||| || ||||||| | |||    
T  43018794 aaaaggacgcatcaacattacatttgaatatgccaggacttggtttaatccacttcaagtcgttcggggtagcgggatgttgaaggataggatgacgaat 43018893  T
Q  217 attctgaccatt 228  Q
    | ||||| ||||    
T  43018894 agtctgagcatt 43018905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 226 - 277
Target Start/End: Original strand, 50204536 - 50204587
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  50204536 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctttt 50204587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 23523076 - 23523130
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23523076 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctttt 23523130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 10307899 - 10307952
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  10307899 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttttta 10307952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 38389577 - 38389629
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  38389577 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 38389629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 279
Target Start/End: Original strand, 11611111 - 11611162
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  11611111 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccttttta 11611162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 16875068 - 16875018
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  16875068 tttaaacttcttaacatgtgcaaatttgcacacgatagaaaaacccttttt 16875018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 2571401 - 2571450
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  2571401 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 2571450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 3863464 - 3863509
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  3863464 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 3863509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 32553501 - 32553546
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  32553501 tttaaacttcttaacatgtgtaaatttacacatgatagaaaaaccc 32553546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 35414854 - 35414809
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  35414854 attttgaacttcttaacatgtgtaaatttgcacatgatagaaaaac 35414809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 272
Target Start/End: Complemental strand, 36426457 - 36426408
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  36426457 accactttaaacttcttaacatgtgtaaatttacacatgatagaaaaacc 36426408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 40930184 - 40930229
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  40930184 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaac 40930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 8165779 - 8165823
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  8165779 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 8165823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 51618180 - 51618228
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  51618180 atttgaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 51618228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 2566615 - 2566670
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttata 281  Q
    |||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||    
T  2566615 attttaaattttctaacatgtgtaaatttgcacatgatagaaaaaccttttttata 2566670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 20938192 - 20938247
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttatatt 283  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| | |||||||||    
T  20938192 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaactcattttatatt 20938247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 41151768 - 41151810
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  41151768 tttaaacttcttatcatgtgtaaatttgcacatgatagaaaaa 41151810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 288
Target Start/End: Original strand, 42180185 - 42180247
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttatattcacaa 288  Q
    |||||||||||||||||||||| |||||| ||||||||||||||| ||| ||| |||| ||||    
T  42180185 attttaaacttcttaacatgtgcaaatttacacatgatagaaaaatcctatttttatttacaa 42180247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 29686455 - 29686500
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  29686455 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 29686500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 33474514 - 33474473
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  33474514 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 33474473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 45983639 - 45983688
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||||||||    
T  45983639 attttaaacttcttaacctgtgcaaatttgcacatgataaaaaaaccctt 45983688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 51401573 - 51401621
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  51401573 attttaaacttcttaacatgtgcaaatttgtacataatagaaaaaccct 51401621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 54527751 - 54527695
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttatat 282  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||| |||| ||||||    
T  54527751 attttaaatttcttaacatgtgcaaatttgcacataatagaaaaatccttcttatat 54527695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 13443939 - 13443844
Alignment:
Q  28 cggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgagaaaagga 123  Q
    ||||||||||||||  || |||||||||| |||| ||||||| ||||||||||| ||  | ||||| || ||| |||||  |||||||||||||||    
T  13443939 cggagtcatccatttcgttttggctaaaataaaatgaccttcatcatctcgaatacacgcgccaatgccgacctgattcaaagcttgagaaaagga 13443844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 12515519 - 12515469
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||| || |||||||||| |||||| |||||||||||||||||||||    
T  12515519 attttaaattttttaacatgtgcaaatttacacatgatagaaaaacccttt 12515469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 23803091 - 23803049
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaa 268  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  23803091 attttaaacttcttaacatgtgcaaatttgcatatgatagaaa 23803049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Original strand, 40497182 - 40497224
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||||| |||||| ||||||||||||||||||||||    
T  40497182 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaa 40497224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 276
Target Start/End: Complemental strand, 23638097 - 23638044
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    ||||||||||| ||||||||||||| |||||||| ||||||| ||||| |||||    
T  23638097 accattttaaatttcttaacatgtgcaaatttgctcatgatataaaaatccttt 23638044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 31318777 - 31318818
Alignment:
Q  229 ttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  31318777 ttaaacttcttaacatgtgcaaattttcacatgatagaaaaa 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 25633131 - 25633179
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||| |||||||||||| ||  ||||||||||||||||||||||||||    
T  25633131 attttgaacttcttaacaagttcaaatttgcacatgatagaaaaaccct 25633179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 37055411 - 37055367
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||| ||||| |||||| |||||||||||||||    
T  37055411 attttaaacttcttaatatgtgcaaattttcacatgatagaaaaa 37055367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 11611049 - 11611088
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaa 267  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  11611049 tttaaacttcttatcatgtgcaaatttgcacatgatagaa 11611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Original strand, 13495429 - 13495472
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||||| |||||| |||||| ||||||||||||||||    
T  13495429 tttaaacttcttatcatgtgcaaattttcacatgatagaaaaac 13495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 46492386 - 46492343
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||| |||||||| |||| |||||||||||||||||||||||    
T  46492386 tttaaatttcttaacgtgtgaaaatttgcacatgatagaaaaac 46492343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 46845187 - 46845144
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||| |||||||||||||||  ||||||||||||||||||||||    
T  46845187 ttttgaacttcttaacatgtacaaatttgcacatgatagaaaaa 46845144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 13495328 - 13495286
Alignment:
Q  237 cttaacatgtgtaaatttgcacatgatagaaaaacccttttta 279  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||    
T  13495328 cttaacatgtgcaaatttgcacatgttagacaaacccttttta 13495286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 25513936 - 25513886
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    ||||||||||||||| ||||| | ||||||||||| | |||||||||||||    
T  25513936 ttttaaacttcttaatatgtgcagatttgcacatgttggaaaaaccctttt 25513886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 15269201 - 15269160
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||| |||||| || |||||||||||||    
T  15269201 taaacttcttaacatgtgcaaatttacatatgatagaaaaac 15269160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 15862947 - 15862902
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||| |||||||||||  ||||| ||||||||||||||||    
T  15862947 attttaaactccttaacatgtgcgaatttacacatgatagaaaaac 15862902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 237 - 270
Target Start/End: Complemental strand, 51567854 - 51567821
Alignment:
Q  237 cttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||| ||||||||||||||||||||||    
T  51567854 cttaacatgtgcaaatttgcacatgatagaaaaa 51567821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 112; Significance: 4e-56; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 17 - 228
Target Start/End: Original strand, 2538 - 2749
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||| |||| ||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  2538 acatcaagaagcgaagtcatccattcagtcttggctaaaacaaagtgaccttcatcgtctcgaatgcaaacaccaataccgacccgattccgagcttgag 2637  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaat 216  Q
    | |||||| ||||||||||||||||||| ||  || |||||||||| |||||||||||||||||| |||||  | |||| |||| | || |||| | |||    
T  2638 agaaggacgcatcaacattacaagtaaacctgtcgggacttggtttgatccacttcaaatcattcagggtgtcaagattctgagagatatgatgtcgaat 2737  T
Q  217 attctgaccatt 228  Q
    ||||||| ||||    
T  2738 attctgagcatt 2749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 108; Significance: 1e-53; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 58197 - 58030
Alignment:
Q  19 atcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgagaa 118  Q
    ||||| |||||||| ||||||||||||||||||||||||| || ||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||    
T  58197 atcaacgagcggagacatccattcagtcttggctaaaacataatgacctttatcatctcgaatgcacacaccaatgccaacccgattccgagcttgagaa 58098  T
Q  119 aaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggt 186  Q
    |||||| |||||||||||||  ||||||| ||| |||||||||||||||||||||| || ||||||||    
T  58097 aaggacgcatcaacattacatttaaatctgccgggacttggtttaatccacttcaagtcgttcggggt 58030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 13218 - 13264
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  13218 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacc 13264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 1e-46; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 38452031 - 38452186
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||| |||| |||||||| ||||||||| |||||| |||||||||| |||||||||||||| |||||||| |||||| ||||| |||||||||    
T  38452031 acatcaaggagtggagacatccatttagtcttggccaaaacataacgaccttcatcatctcgaatgcacacaccaatgccaacctgattctgagcttgag 38452130  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttc 172  Q
    |||||||| |||||||||||||  |||||||| || ||||||||||||||||||||    
T  38452131 aaaaggacgcatcaacattacatttaaatctatcgggacttggtttaatccacttc 38452186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 23770114 - 23770283
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||| |||| ||| |||||||||||||| |||||| ||| |||||| |||||||||||||| |||||||| |||||||||||| |||||||||    
T  23770114 acatcaaggagtggagacattcattcagtcttggccaaaacataacaaccttcatcatctcgaatgcacacaccaatgccaacccgattctgagcttgag 23770213  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggt 186  Q
    ||||  || |||||||||||||   ||||||  || |||||||||||||||||||||| |||||||||||    
T  23770214 aaaataacgcatcaacattacattaaaatctgtcgggacttggtttaatccacttcaagtcattcggggt 23770283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 66 - 228
Target Start/End: Original strand, 24477844 - 24478006
Alignment:
Q  66 cttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgagaaaaggacacatcaacattacaagtaaatctaccgagacttggtttaat 165  Q
    |||| ||||||||||| || ||||||||  |||| | ||||||||||| |||||||||  |||||||||||||  | | ||||||  |||||||||||||    
T  24477844 cttcatcatctcgaatacacacaccaatgacaactcaattccgagcttcagaaaaggatgcatcaacattacatttgattctaccaggacttggtttaat 24477943  T
Q  166 ccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaatattctgaccatt 228  Q
    |||||||||||| |||||||| |  |||| ||||||| ||||||| | |||| ||||| ||||    
T  24477944 ccacttcaaatcgttcggggtagcgggatgttgagggataggatgacgaatagtctgagcatt 24478006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 23408086 - 23408162
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaat 93  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| || ||||||||    
T  23408086 acatcaatgagcggagtcatccattcagttttggctaaaacaaaacgaccttcatcatctcgaatacacacaccaat 23408162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 31 - 177
Target Start/End: Complemental strand, 10213604 - 10213459
Alignment:
Q  31 agtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgagaaaaggacacatca 130  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||| || || |||||||| || ||| |||||  |||||||||||| ||| ||||     
T  10213604 agtcatccattcagttttggctaaaacaaaacaaccttcatcatctcggatacacacaccaatgccgacctgattcaaagcttgagaaaa-gacgcatcc 10213506  T
Q  131 acattacaagtaaatctaccgagacttggtttaatccacttcaaatc 177  Q
    || |||||  |||| ||  || |||||||||| | ||||||||||||    
T  10213505 acgttacatttaaacctgtcgggacttggtttgacccacttcaaatc 10213459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 36731310 - 36731369
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttatat 282  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  36731310 accattttaaatttcttaacatgtgtaaatttacacatgatagaaaaacccttattatat 36731369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 8065256 - 8065306
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8065256 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttt 8065306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 7757831 - 7757783
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7757831 attttaaatttcttaacatgtgtaaatttgcacatgatagaaaaaccct 7757783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 9747450 - 9747497
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  9747450 attttaaacttcttaacatgtgaaaatttgcacatgatagaaaaaccc 9747497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 16126602 - 16126555
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  16126602 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 16126555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 20566060 - 20566017
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  20566060 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 20566017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 6109524 - 6109570
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  6109524 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 6109570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 24729622 - 24729573
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  24729622 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 24729573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 29142210 - 29142255
Alignment:
Q  229 ttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  29142210 ttaaacttctaaacatgtgtaaatttgcacatgatagaaaaaccct 29142255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 34817881 - 34817926
Alignment:
Q  229 ttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  34817881 ttaaacttcttaacatgtgtaagtttgcacatgatagaaaaaccct 34817926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 38248465 - 38248416
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  38248465 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 38248416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 27665087 - 27665039
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  27665087 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaacccttt 27665039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 29157874 - 29157822
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  29157874 atttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaacccttttt 29157822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 43388525 - 43388477
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  43388525 ttttgaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 43388477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 12016801 - 12016848
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  12016801 tttaaacttcttaatatgtgcaaatttgcacatgatagaaaaaccctt 12016848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 26003391 - 26003348
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  26003391 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 26003348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 278
Target Start/End: Original strand, 9450392 - 9450442
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||||||    
T  9450392 tttaaatttcttaacatgtgcagatttgcacatgatagaaaaacccttttt 9450442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 5583603 - 5583554
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||||||    
T  5583603 attttaaatttcttaacatgtgcaaatttgcgcatgatagaaaaaccctt 5583554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 5853504 - 5853463
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  5853504 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 5853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 271
Target Start/End: Complemental strand, 16493573 - 16493532
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  16493573 taaacttcttaacatgtgcaaatttgcacatgatagaaaaac 16493532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 19228560 - 19228601
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  19228560 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaa 19228601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 4821411 - 4821459
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||||||    
T  4821411 tttaaacttcttatcatgtgcaaatttgcacataatagaaaaacccttt 4821459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 276
Target Start/End: Complemental strand, 11660933 - 11660889
Alignment:
Q  232 aacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||    
T  11660933 aacttcttaacatgtgcaaatttgcacatgatagaaaaactcttt 11660889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 15231961 - 15232009
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  15231961 accactttaaacttcttaacatgtgcaaatttgcacataatagaaaaac 15232009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Complemental strand, 15411667 - 15411619
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  15411667 attttaaacttcttaacatgtgcaaatttgcacatgttagaaaacccct 15411619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 19183487 - 19183531
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||    
T  19183487 attttaaacttcttaacatatgtaaatttgtacatgatagaaaaa 19183531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 16123413 - 16123460
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  16123413 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaatcctt 16123460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 8770929 - 8770887
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||| |||||||||||||||| |||||    
T  8770929 tttaaacttcttaacatgtgcaaatttgcacatgataaaaaaa 8770887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 239 - 273
Target Start/End: Complemental strand, 14707044 - 14707010
Alignment:
Q  239 taacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||||||||||||||||||    
T  14707044 taacatgtgtaaatttgcacatgatagaaaaaccc 14707010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 2060085 - 2060044
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  2060085 tttaaatttcttaacatgtgtaaatttgcacatcatagaaaa 2060044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 4576371 - 4576322
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| |||||||||| ||  ||||||||||||||||||||||||||    
T  4576371 attttaaatttcttaacatatgcgaatttgcacatgatagaaaaaccctt 4576322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 9895145 - 9895190
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||    
T  9895145 attttaaacttcttaacatttgaaaatttgcatatgatagaaaaac 9895190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 271
Target Start/End: Original strand, 22704674 - 22704715
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  22704674 taaacttcttaagatgtgcaaatttgcacatgatagaaaaac 22704715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 23932698 - 23932743
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||| || || |||||||||||||||||||||||    
T  23932698 attttaaacttcttaatatatgcaaatttgcacatgatagaaaaac 23932743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 45062331 - 45062376
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||| |||||||||| ||||| |||||||||||||||||||||||    
T  45062331 attttgaacttcttaatatgtgcaaatttgcacatgatagaaaaac 45062376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 12919395 - 12919351
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||| || ||||||||||||||||||||||||||| |||||    
T  12919395 attttaaattttttaacatgtgtaaatttgcacatgataaaaaaa 12919351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 14377559 - 14377607
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    ||||||||||||| |||||  ||||||||||||||||||||| ||||||    
T  14377559 tttaaacttcttatcatgtacaaatttgcacatgatagaaaatcccttt 14377607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 17265537 - 17265585
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  17265537 attttaaatttcttaacaagtgcaaatttggacatgatagaaaaaccct 17265585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 34213994 - 34213950
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  34213994 attttaaatttcttaacatgtgcaaatttgcacacgatagaaaaa 34213950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 6765134 - 6765177
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||||||||||||| |||| | |||||||||||||||    
T  6765134 ttttaaacttcttaacatgtgcaaatctacacatgatagaaaaa 6765177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 229 - 276
Target Start/End: Original strand, 7720251 - 7720298
Alignment:
Q  229 ttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||| |||||| ||| ||||||||||||||||||||||| ||||    
T  7720251 ttaaactttttaacacgtgcaaatttgcacatgatagaaaaactcttt 7720298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 283
Target Start/End: Original strand, 35729252 - 35729307
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttatatt 283  Q
    ||||||||||| |||||||| ||||||| ||||| |||||||||||| ||| ||||    
T  35729252 tttaaacttctcaacatgtgcaaatttgtacatgttagaaaaaccctatttttatt 35729307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 43806493 - 43806540
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||| |||||||||| |||||| |||| |||||||||||||    
T  43806493 attttaaactttttaacatgtgcaaatttacacacgatagaaaaaccc 43806540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 235 - 273
Target Start/End: Original strand, 6889780 - 6889818
Alignment:
Q  235 ttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  6889780 ttcttaatctgtgtaaatttgcacatgatagaaaaaccc 6889818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 25295892 - 25295850
Alignment:
Q  232 aacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||    
T  25295892 aacttcctaacatgtgcaaatttgcaaatgatagaaaaaccct 25295850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 16919197 - 16919148
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| |||||    
T  16919197 tttaaacttgttaatatgtgcaaatttgcacatgatagataaactctttt 16919148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 27277 - 27434
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||| |||  ||||||| |||||||||| |||||| |||||| ||| | |||||||||||| |||||||| ||||||||||||||||||||||    
T  27277 acatcaaggagtggaaacatccatccagtcttggccaaaacataacgacattcattatctcgaatgcacacaccaatgccaacccgattccgagcttgag 27376  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaa 174  Q
    |||||||| |||||||||||||  |||||||  || ||||||| ||||||||||||||    
T  27377 aaaaggacgcatcaacattacatttaaatctgtcgggacttggattaatccacttcaa 27434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 216262 - 216072
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||||||||||| |||||||| ||||||||| |||||| |||  ||||  |||||| ||||||| |||| |||  |||||| ||| ||||||||||    
T  216262 acatcaaggagcggagacatccattgagtcttggccaaaacataacatccttaatcatcttgaatgcacacacaaatgtcaacccaatttcgagcttgag 216163  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccacttcaaatcattcggggtggaaggattttgagggctaggatg 210  Q
    |||   || |||||||||||||  ||||||| ||| |||||||||||||||||||||| ||||||||| | |  |||| ||||||| |||||||    
T  216162 aaa---acgcatcaacattacatttaaatctgccgggacttggtttaatccacttcaagtcattcgggttagcgggatgttgagggataggatg 216072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 34802097 - 34802147
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34802097 accattttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 34802147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 35512858 - 35512907
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35512858 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 35512907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 6180319 - 6180367
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6180319 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 6180367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 30172009 - 30172061
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  30172009 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 30172061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 30187550 - 30187602
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  30187550 accactttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 30187602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 30288907 - 30288863
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30288907 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 30288863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 44918159 - 44918207
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44918159 tttaaatttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 44918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 166
Target Start/End: Original strand, 15302954 - 15303073
Alignment:
Q  47 ttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgagaaaaggacacatcaacattacaagtaaatc 146  Q
    ||||| |||||| | || ||||| ||||||||||| || ||||||||  ||||||||||  ||| ||||||||| |||||||||||||||||  ||||||    
T  15302954 ttggccaaaacatatcgcccttcatcatctcgaatacacacaccaatgtcaacccgattttgagtttgagaaaaagacacatcaacattacatttaaatc 15303053  T
Q  147 taccgagacttggtttaatc 166  Q
    | | | || |||||||||||    
T  15303054 tgctgggagttggtttaatc 15303073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 25071144 - 25071247
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    ||||||||||||||||||||||||||| | || ||||| | | |||||| ||| ||||||||||| || |||||||| |  || |||||| |||||||||    
T  25071144 acatcaaggagcggagtcatccattcaattttagctaacaaataacgacattcatcatctcgaatacacacaccaatgctgactcgattcagagcttgag 25071243  T
Q  117 aaaa 120  Q
    ||||    
T  25071244 aaaa 25071247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 39310831 - 39310777
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttat 280  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||| |||||    
T  39310831 attttaaactttttaacatgtgcaaatttgcacatgatagaaaaaccctatttat 39310777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 51382447 - 51382505
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt-tttatatt 283  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  51382447 attttaaacttcttaacatgtgcaaagttgcacatgatagaaaaacccttatttatatt 51382505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 313884 - 313929
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  313884 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 313929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 6570028 - 6569983
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  6570028 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 6569983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 23576459 - 23576410
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  23576459 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccctt 23576410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 5875260 - 5875216
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  5875260 attttaaacttcttaacatgtgcaaatttgcacatgatagaaaaa 5875216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 6307637 - 6307685
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  6307637 tttaaacttcttaacatgtgcaaatttgcacatgatataaaaacccttt 6307685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 25465291 - 25465339
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  25465291 attttgaacttcttaacatgtgcaaatttgcacatgatagaaaaaccct 25465339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 1502765 - 1502718
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||    
T  1502765 attttaaatttcttaacatgtgcaaatttgcacatgatagaaaaaccc 1502718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 35438845 - 35438892
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  35438845 accattttaaatttcttaacatgtgcaaatttgcacatgatagaaaaa 35438892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 36490912 - 36490959
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  36490912 attttaaacttcttaacatgtgcaaatttgctcatgatagaaaaaccc 36490959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 38812873 - 38812920
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  38812873 attttgaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 38812920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 39150370 - 39150323
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  39150370 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccctt 39150323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 272
Target Start/End: Original strand, 13322009 - 13322055
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||    
T  13322009 attttaaacttcttaacatatgcaaatttgcacatgatagaaaaacc 13322055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 1366180 - 1366225
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||    
T  1366180 attttaaatttctttacatgtgtaaatttgcacatgatagaaaaac 1366225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 3168113 - 3168064
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  3168113 attttaaactttttaacgtgtgcaaatttgcacatgatagaaaaaccctt 3168064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 6754606 - 6754651
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||    
T  6754606 tttaaacttcttatcatgtgcaaatttgcacatgatagaaaaaccc 6754651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 228 - 277
Target Start/End: Original strand, 17919588 - 17919637
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    |||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  17919588 tttaaacttcttattatgtgcaaatttgcacatgatagaaaaaccctttt 17919637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 22167468 - 22167517
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||||||||| |||||| ||||||||||||||||| |||||||||    
T  22167468 attttaaacttcttatcatgtgcaaatttgcacatgataggaaaaccctt 22167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 43317596 - 43317640
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  43317596 attttaaacttcttaacatgtgtaaatttgtacatgattgaaaaa 43317640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 4607612 - 4607663
Alignment:
Q  230 taaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttttata 281  Q
    |||| |||||||||| |||||||||| |||||||||||||||| ||||||||    
T  4607612 taaatttcttaacatatgtaaatttgtacatgatagaaaaaccttttttata 4607663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 9516711 - 9516758
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  9516711 accattttaaatttcttaacatgtgcaaatttacacatgatagaaaaa 9516758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 13241887 - 13241934
Alignment:
Q  223 accattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  13241887 accattttaaatttcttaacatgtgcaaattttcacatgatagaaaaa 13241934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 2222278 - 2222236
Alignment:
Q  229 ttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||| |||||||||||||||||||| ||||||||||||||||    
T  2222278 ttaaatttcttaacatgtgtaaattttcacatgatagaaaaac 2222236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 5879148 - 5879102
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||    
T  5879148 atttcaaacttcttaacatgtgcaaatttacacatgatagaaaaacc 5879102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 7520042 - 7519996
Alignment:
Q  226 attttaaacttcttaacatgtgtaaa-tttgcacatgatagaaaaac 271  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  7520042 attttaaacttcttaacatgtgaaaattttgcacatgatagaaaaac 7519996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 41624964 - 41625010
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccct 274  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||||    
T  41624964 tttaaacttcttatcatatgcaaatttgcacatgatagaaaaaccct 41625010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 23591831 - 23591876
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||| ||| ||||||||||||| |||||||||||||||||||||||    
T  23591831 atttaaaatttcttaacatgtgcaaatttgcacatgatagaaaaac 23591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 33048169 - 33048124
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||||| |||||||||||| ||||| ||||||||||    
T  33048169 attttaaacttcttaatatgtgtaaattttcacatcatagaaaaac 33048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 33673780 - 33673735
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||||||| | |||||||||||| |||||||||||||||    
T  33673780 attttaaacttcttagcgtgtgtaaatttgaacatgatagaaaaac 33673735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 51920476 - 51920431
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||| || |||||||||| |||||||||||||||||||||||    
T  51920476 attttaaatttattaacatgtgcaaatttgcacatgatagaaaaac 51920431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 10896488 - 10896532
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    |||||||||||||||||||| || ||| |||||||||||||||||    
T  10896488 tttaaacttcttaacatgtgcaattttacacatgatagaaaaacc 10896532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 19956333 - 19956181
Alignment:
Q  17 acatcaaggagcggagtcatccattcagtcttggctaaaacaaaacgaccttcttcatctcgaatgcaaacaccaataccaacccgattccgagcttgag 116  Q
    |||||||| | | ||||||||||||| |  || ||||| | | |||||||||| |||| |||||| || | |||||| ||||| | |||| || | ||||    
T  19956333 acatcaagaaacagagtcatccattcggatttagctaatagataacgaccttcatcatttcgaatacacataccaatgccaactcaattcagaccatgag 19956234  T
Q  117 aaaaggacacatcaacattacaagtaaatctaccgagacttggtttaatccac 169  Q
    |||||||  |||| ||||||||  |||| ||||||| | ||||||||| ||||    
T  19956233 aaaaggaagcatctacattacatttaaacctaccgaaagttggtttaagccac 19956181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 32201757 - 32201801
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||    
T  32201757 attttaaacttcttaatatgtgcaaatttgcacataatagaaaaa 32201801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 41676605 - 41676561
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||    
T  41676605 attttgaatttcttaacatgtgcaaatttgcacatgatagaaaaa 41676561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 4249341 - 4249388
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| ||||||||||  |||||||||||| |||||||||||||    
T  4249341 tttaaacttattaacatgtgcgaatttgcacatgttagaaaaaccctt 4249388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 4249665 - 4249712
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| ||||||||||  |||||||||||| |||||||||||||    
T  4249665 tttaaacttattaacatgtgcgaatttgcacatgttagaaaaaccctt 4249712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 4249989 - 4250036
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| ||||||||||  |||||||||||| |||||||||||||    
T  4249989 tttaaacttattaacatgtgcgaatttgcacatgttagaaaaaccctt 4250036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 19066633 - 19066680
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| |||||||||| ||||||  |||||||||||||||||||    
T  19066633 tttaaactttttaacatgtgcaaatttatacatgatagaaaaaccctt 19066680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 19114523 - 19114570
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| |||||||||| ||||||  |||||||||||||||||||    
T  19114523 tttaaactttttaacatgtgcaaatttatacatgatagaaaaaccctt 19114570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 30363040 - 30362993
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||| || ||| |||||| |||||||||||||||||||||||||    
T  30363040 attttaaatttgttatcatgtgcaaatttgcacatgatagaaaaaccc 30362993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 46091048 - 46091090
Alignment:
Q  168 acttcaaatcattcggggtggaaggattttgagggctaggatg 210  Q
    ||||||||||||||||||||| |||||| |||||| |||||||    
T  46091048 acttcaaatcattcggggtggcaggattctgagggataggatg 46091090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 44013069 - 44013110
Alignment:
Q  237 cttaacatgtgtaaatttgcacatgatagaaaaacccttttt 278  Q
    ||||||||||| ||||||||||||| |||||||| |||||||    
T  44013069 cttaacatgtgcaaatttgcacatgttagaaaaatccttttt 44013110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 47355423 - 47355378
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||| ||||||||||||||||||||  || ||||||||||||    
T  47355423 attttaaatttcttaacatgtgtaaatttatacgtgatagaaaaac 47355378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 47990109 - 47990154
Alignment:
Q  232 aacttcttaacatgtgtaaatttgcacatgatagaaaaaccctttt 277  Q
    ||||| |||||||||||||||||||| |||||| |||||| |||||    
T  47990109 aacttattaacatgtgtaaatttgcatatgatataaaaactctttt 47990154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 4e-16; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 37157 - 37109
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37157 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaacccttt 37109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 41115 - 41160
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    ||||||||||||||||||| |  |||||| ||||||||||||||||    
T  41115 attttaaacttcttaacatatacaaatttacacatgatagaaaaac 41160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 52822 - 52777
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  52822 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 52777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 145812 - 145857
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  145812 tttaaacttcttaacatgtgcaaatttgcacatgatagaaaaaccc 145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 16578 - 16530
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacccttt 276  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||    
T  16578 tttaaacttcttaacatgtgcaaatttgcacatgatataaaaacccttt 16530  T

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Target: scaffold0229 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 24572 - 24527
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||    
T  24572 attttaaatttctttacatgtgtaaatttgcacatgatagaaaaac 24527  T

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Target: scaffold0074 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 45542 - 45497
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  45542 attttaaacttctttacatatgtaaatttgcacatgatagaaaaac 45497  T

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Target: scaffold0727 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 5826 - 5873
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    ||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  5826 tttaaactttttaacatgtgcaaatttgcacatgatagaaaaatcctt 5873  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 182177 - 182224
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccctt 275  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||||    
T  182177 tttaaacttcttaacatgtacaaatttacacatgatagaaaaaccctt 182224  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 1487 - 1445
Alignment:
Q  227 ttttaaacttcttaacatgtgtaaatttgcacatgatagaaaa 269  Q
    ||||||||||||||||||||| |||||||||||||||| ||||    
T  1487 ttttaaacttcttaacatgtgcaaatttgcacatgataaaaaa 1445  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 226 - 272
Target Start/End: Complemental strand, 44339 - 44293
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaacc 272  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  44339 attttaaactttttaatatgtgcaaatttgcacatgatagaaaaacc 44293  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 3456 - 3411
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaaccc 273  Q
    |||||||||||||| ||||| |||||| ||||||||||||||||||    
T  3456 tttaaacttcttaatatgtgcaaatttacacatgatagaaaaaccc 3411  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 94063 - 94018
Alignment:
Q  226 attttaaacttcttaacatgtgtaaatttgcacatgatagaaaaac 271  Q
    |||| |||||||||||||| || |||||||||||||||||||||||    
T  94063 atttaaaacttcttaacatatgcaaatttgcacatgatagaaaaac 94018  T

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Target: scaffold0607 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Complemental strand, 5323 - 5264
Alignment:
Q  164 atccacttcaaatcattcggggtggaaggattttgagggctaggatgccaaatattctga 223  Q
    |||||||||||||||||| |||||  |||||| |||||| ||||||| | ||||||||||    
T  5323 atccacttcaaatcattcagggtgtcaggattctgagggttaggatgtcgaatattctga 5264  T

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Target: scaffold0192 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 13606 - 13564
Alignment:
Q  228 tttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    |||||||||||||||||||| ||||||||||||  ||||||||    
T  13606 tttaaacttcttaacatgtgcaaatttgcacatattagaaaaa 13564  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 22596 - 22641
Alignment:
Q  225 cattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||| ||||||||||||| ||||||| |||| |||||||||    
T  22596 cattttaaatttcttaacatgtgcaaatttgtacataatagaaaaa 22641  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 244 - 273
Target Start/End: Complemental strand, 13693 - 13664
Alignment:
Q  244 tgtgtaaatttgcacatgatagaaaaaccc 273  Q
    ||||||||||||||||||||||||||||||    
T  13693 tgtgtaaatttgcacatgatagaaaaaccc 13664  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 191361 - 191316
Alignment:
Q  225 cattttaaacttcttaacatgtgtaaatttgcacatgatagaaaaa 270  Q
    ||||||||| ||||||||||||| |||||||||||| ||| |||||    
T  191361 cattttaaatttcttaacatgtgcaaatttgcacataataaaaaaa 191316  T

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