View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9029_high_10 (Length: 209)
Name: NF9029_high_10
Description: NF9029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9029_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 11585010 - 11584823
Alignment:
| Q |
17 |
aaatttgcagcacatggttaaatcgaccatcatcaatcgaagactaaaaaattggcatttgctacctgatgtcggaagcttatcattactgaaatattaa |
116 |
Q |
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| T |
11585010 |
aaatttgcagcagatggttaaaccgaccatcatcaatcgaagactaaaaaattggcattcgctacctgatgtcggaagcttatcattactgaaatattaa |
11584911 |
T |
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| Q |
117 |
aagaaatgttcttagaaactttattaccaaaatcagtgtatctctttctaggtgcatgaagaaactcggcataatcttgatgtccatc |
204 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
11584910 |
aagaaatgttctgagaaactttattaccaaaatcagtgtatctctttctaggtgcatgaagaaactcggcataatcttgttgtccatc |
11584823 |
T |
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