View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9030_low_6 (Length: 580)

Name: NF9030_low_6
Description: NF9030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9030_low_6
NF9030_low_6
[»] chr1 (10 HSPs)
chr1 (102-566)||(3613663-3614127)
chr1 (18-99)||(3346740-3346822)
chr1 (18-101)||(48392498-48392580)
chr1 (18-109)||(7742871-7742963)
chr1 (18-101)||(23908237-23908321)
chr1 (18-101)||(42517390-42517474)
chr1 (18-102)||(29149640-29149725)
chr1 (18-101)||(10156108-10156192)
chr1 (18-101)||(49902421-49902504)
chr1 (18-90)||(5974951-5975024)
[»] chr3 (10 HSPs)
chr3 (101-566)||(14757485-14757950)
chr3 (18-101)||(5391410-5391493)
chr3 (18-98)||(40846009-40846090)
chr3 (18-101)||(44995061-44995145)
chr3 (18-101)||(23467586-23467671)
chr3 (18-100)||(13856052-13856135)
chr3 (18-57)||(21853194-21853233)
chr3 (18-58)||(32352843-32352883)
chr3 (18-100)||(8950596-8950679)
chr3 (71-101)||(21853148-21853178)
[»] chr7 (10 HSPs)
chr7 (18-101)||(24320531-24320614)
chr7 (18-101)||(29556031-29556115)
chr7 (18-100)||(32876622-32876705)
chr7 (18-101)||(34707068-34707152)
chr7 (18-101)||(44164835-44164919)
chr7 (18-102)||(29238235-29238320)
chr7 (18-58)||(10576669-10576709)
chr7 (18-100)||(19334654-19334736)
chr7 (73-101)||(34259484-34259512)
chr7 (18-46)||(34259526-34259554)
[»] chr6 (6 HSPs)
chr6 (18-104)||(24694743-24694830)
chr6 (18-101)||(11084562-11084646)
chr6 (18-101)||(9231946-9232030)
chr6 (18-58)||(14309890-14309930)
chr6 (26-100)||(13627494-13627568)
chr6 (67-101)||(1728039-1728073)
[»] chr4 (10 HSPs)
chr4 (18-104)||(52632467-52632554)
chr4 (18-103)||(37801356-37801442)
chr4 (18-101)||(25954702-25954786)
chr4 (18-102)||(34240944-34241029)
chr4 (20-101)||(49284309-49284391)
chr4 (18-98)||(1535726-1535807)
chr4 (18-102)||(16338336-16338421)
chr4 (18-103)||(35018886-35018972)
chr4 (18-101)||(31377341-31377425)
chr4 (18-100)||(46583633-46583716)
[»] chr2 (8 HSPs)
chr2 (18-98)||(40277380-40277461)
chr2 (18-101)||(14186530-14186614)
chr2 (18-101)||(14942136-14942220)
chr2 (18-98)||(42769850-42769931)
chr2 (18-101)||(19181500-19181584)
chr2 (18-57)||(29846439-29846478)
chr2 (67-101)||(3956523-3956557)
chr2 (70-98)||(29846396-29846424)
[»] chr8 (7 HSPs)
chr8 (18-101)||(22324548-22324632)
chr8 (18-102)||(21525309-21525394)
chr8 (18-101)||(33934461-33934546)
chr8 (18-58)||(26021391-26021431)
chr8 (18-101)||(35806746-35806830)
chr8 (18-103)||(42013822-42013908)
chr8 (67-98)||(42072383-42072414)
[»] chr5 (8 HSPs)
chr5 (18-101)||(23218437-23218521)
chr5 (18-98)||(15631568-15631649)
chr5 (18-107)||(16618662-16618753)
chr5 (18-101)||(37169125-37169209)
chr5 (18-95)||(6257502-6257580)
chr5 (18-103)||(38397548-38397634)
chr5 (18-97)||(39862579-39862659)
chr5 (67-101)||(10081096-10081130)
[»] scaffold0079 (1 HSPs)
scaffold0079 (18-102)||(54439-54524)


Alignment Details
Target: chr1 (Bit Score: 433; Significance: 0; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 102 - 566
Target Start/End: Original strand, 3613663 - 3614127
Alignment:
Q  102 tttgaagataaatgaatacagtatgcaacaacttgctgcgctgaatcttgttccatgcgcccgctcaaaattggcagcatggacaagagcctatgtggta 201  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3613663 tttgaagataaatgaatacagtatgcaacaacttgctgtgctgaatcttgttccatgcgcccgctcaaaattggcagcatggacaagagcctatggggta 3613762  T
Q  202 ggttctggtattatgcctcatccaacttcaagaaccttgaaagaatattactggacggattcgtttgcaaatcaagagaatgttagggcttgtttagctt 301  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3613763 ggttctggtattatgcctcatccaacttcaagaaccttgaaagagtattgttggacggattcttttgcaaatcaagagaatgttagggcttgtttagctt 3613862  T
Q  302 ggaagaaagagacatgttctggaaaactgatgaacgtgatttgcttgaatgttatcggtctgtttgggctacttcacctcaataaggatcgcacattctg 401  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3613863 gggagaaagagacatgttctggaaaaccgatgaacgtgatttgcttgaatgttatcggtctgtttgggctacttcacctcaataaggatcgcacattctg 3613962  T
Q  402 ttataatgatctgaatatgaaccgtatttgtacttcatggcttaataccttggattctattacaacaaagagaatgcataatgagattcttaatcaaaaa 501  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3613963 ttataatgatctgaatatgaaccgtatttgtacttcatggcttaataccttggattctattacaacaaagagaatgcataatgagattcttaatcaaaaa 3614062  T
Q  502 gaagcactttgtaggattgttgcacatccatttggattagcacaaacatactggcttgcacaggt 566  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3614063 gaagcactttgtaggattgttgcacatccatttggattagcacaaacatactggcttgcacaggt 3614127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 3346822 - 3346740
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccac 99  Q
    |||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||    
T  3346822 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgccac 3346740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 48392498 - 48392580
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||        |||||| ||||||||||||||||||||||||||||    
T  48392498 gcttgcaatttcttatgtacgccctataaatgtgttgcaaa-tttttttgcccggactttacaatattcctggctccgccactg 48392580  T

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Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 7742871 - 7742963
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactgtttgaaga 109  Q
    |||||||||||||||||||||||||||||||| ||||||||         || ||| |||||||||||||||||||||||||||| |||||||    
T  7742871 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgctcggactttacaatattcctggctccgccactgcttgaaga 7742963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 23908321 - 23908237
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa-annnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||||||||    
T  23908321 gcttgcaatttcttatgtacgccctataaatgtgttgcaattttttttttgcccgggctttacaatattcctggctccgccactg 23908237  T

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Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 42517390 - 42517474
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||         || ||||||||||||||||||||||||||||||||    
T  42517390 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcacgggctttacaatattcctggctccgccactg 42517474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 29149640 - 29149725
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactgt 102  Q
    |||||||||||||||||||||||||||| ||| ||||||||         |||||| |||||||||||||||||||||||||||||    
T  29149640 gcttgcaatttcttatgtacgccctatacatgtgttgcaaatttttttttgcccggactttacaatattcctggctccgccactgt 29149725  T

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Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 10156108 - 10156192
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||         |||| |||||||||||||| |||||||||||||||    
T  10156108 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccaggctttacaatatttctggctccgccactg 10156192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 49902504 - 49902421
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||        | ||  ||||||||||||||||| |||||||||||    
T  49902504 gcttgcaatttcttatgtacgccctataaatgtgttgcaaattttttttgtccaagctttacaatattcctgactccgccactg 49902421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 5975024 - 5974951
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctgg 90  Q
    |||||||||||||||||||||||||||||||| |||| |||         ||||||||||||||||||||||||    
T  5975024 gcttgcaatttcttatgtacgccctataaatgtgttgtaaattttattttgcccgggctttacaatattcctgg 5974951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 310; Significance: 1e-174; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 101 - 566
Target Start/End: Original strand, 14757485 - 14757950
Alignment:
Q  101 gtttgaagataaatgaatacagtatgcaacaacttgctgcgctgaatcttgttccatgcgcccgctcaaaattggcagcatggacaagagcctatgtggt 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||    
T  14757485 gtttgaagataaatgaatacagtatgcaacaacttgctgcgttgaatcttgttccatgcgccggctcaaaattggcagcatggacaagagcttatggggt 14757584  T
Q  201 aggttctggtattatgcctcatccaacttcaagaaccttgaaagaatattactggacggattcgtttgcaaatcaagagaatgttagggcttgtttagct 300  Q
    ||||| |||||||||||||||||||||||||||||   ||||||| |||| |||||| ||||| ||||| || |||||||||||||||||||||||||||    
T  14757585 aggttgtggtattatgcctcatccaacttcaagaatgatgaaagagtattgctggactgattcttttgcgaagcaagagaatgttagggcttgtttagct 14757684  T
Q  301 tggaagaaagagacatgttctggaaaactgatgaacgtgatttgcttgaatgttatcggtctgtttgggctacttcacctcaataaggatcgcacattct 400  Q
    ||| |||| ||||  ||||| ||||| | || |||| |||||||||||||| |||| ||||||||||||||| |||||||||||||||||| ||||||||    
T  14757685 tgggagaaggagatgtgttccggaaagccgacgaacatgatttgcttgaatattattggtctgtttgggctatttcacctcaataaggatcacacattct 14757784  T
Q  401 gttataatgatctgaatatgaaccgtatttgtacttcatggcttaataccttggattctattacaacaaagagaatgcataatgagattcttaatcaaaa 500  Q
    || |||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| || ||    
T  14757785 gtaataacgatccgattatgaatcgtatttgtacttcatggcttaataccttggattctattacaacaaagacaatgcagaatgagattcttaaacagaa 14757884  T
Q  501 agaagcactttgtaggattgttgcacatccatttggattagcacaaacatactggcttgcacaggt 566  Q
    ||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  14757885 agaagcactttgtagaattgctgcacatccatttggactagcacaaacatactggcttgcacaggt 14757950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 5391493 - 5391410
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||        |||||||||||||||||||||||||||||||||||    
T  5391493 gcttgcaatttcttatgtacgccctataaatgtgttgcaaattttttttgcccgggctttacaatattcctggctccgccactg 5391410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 40846009 - 40846090
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgcca 98  Q
    |||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||    
T  40846009 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgcca 40846090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 44995061 - 44995145
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||         ||||||||||||| |||||||||||||||||||||    
T  44995061 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggctttactatattcctggctccgccactg 44995145  T

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Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 23467586 - 23467671
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgc--aaannnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| |||||  |||        |||| ||||||||||||||||||||||||||||||    
T  23467586 gcttgcaatttcttatgtacgccctataaatgtgttgcaaaaaaattttccgcccaggctttacaatattcctggctccgccactg 23467671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 13856135 - 13856052
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa-annnnnnnngcccgggctttacaatattcctggctccgccact 100  Q
    |||||||||||||||||||||||||||||||| |||||||          ||| ||||||||||||||||||||||||||||||    
T  13856135 gcttgcaatttcttatgtacgccctataaatgtgttgcaattttttttttgcctgggctttacaatattcctggctccgccact 13856052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 21853233 - 21853194
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa 57  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  21853233 gcttgcaatttcttatgtacgccctataaatgtgttgcaa 21853194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 32352883 - 32352843
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa 58  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  32352883 gcttacaatttcttatgtacgccctataaatgtgttgcaaa 32352843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 8950596 - 8950679
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccact 100  Q
    ||||| |||||||||||||||||||||||||  ||||||||         |||||  |||||||||||||||||||||||||||    
T  8950596 gcttgaaatttcttatgtacgccctataaatatgttgcaaatttttttttgcccgaactttacaatattcctggctccgccact 8950679  T

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Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 101
Target Start/End: Complemental strand, 21853178 - 21853148
Alignment:
Q  71 gggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||    
T  21853178 gggctttacaatattcctggctccgccactg 21853148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 2e-20; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 24320531 - 24320614
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||        ||||||||||||||||||||||| |||||||||||    
T  24320531 gcttgcaatttcttatgtacgccctataaatgtgttgcaaaatttttttgcccgggctttacaatattcctgactccgccactg 24320614  T

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Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 29556031 - 29556115
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||         ||| |||||||||||||||||||||||||||||||    
T  29556031 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcctgggctttacaatattcctggctccgccactg 29556115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 32876622 - 32876705
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccact 100  Q
    |||||||||||||||||||||| ||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  32876622 gcttgcaatttcttatgtacgctctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgccact 32876705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 34707152 - 34707068
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa-annnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| |||||||          |||||||||||| ||||||||||||||||||||||    
T  34707152 gcttgcaatttcttatgtacgccctataaatgtgttgcaattttttttttgcccgggctttagaatattcctggctccgccactg 34707068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 44164835 - 44164919
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||         |||||| ||||| ||||||||||||||||||||||    
T  44164835 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccggactttagaatattcctggctccgccactg 44164919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 29238235 - 29238320
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactgt 102  Q
    |||| |||||||||||||| |||||||||||| ||||||||         |||||| |||||||||||||||| ||||||||||||    
T  29238235 gcttacaatttcttatgtaggccctataaatgtgttgcaaatttttttttgcccggactttacaatattcctgactccgccactgt 29238320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 10576709 - 10576669
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa 58  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  10576709 gcttgcaatttcttatgtacgccctataaatgtattgcaaa 10576669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 19334654 - 19334736
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnngcccgggctttacaatattcctggctccgccact 100  Q
    |||||||||||||||| ||  ||||||||||  |||||||         ||||||||||||||||| ||||||||||||||||    
T  19334654 gcttgcaatttcttatataaaccctataaatttgttgcaatatttttttgcccgggctttacaatagtcctggctccgccact 19334736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 101
Target Start/End: Complemental strand, 34259512 - 34259484
Alignment:
Q  73 gctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||    
T  34259512 gctttacaatattcctggctccgccactg 34259484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 46
Target Start/End: Complemental strand, 34259554 - 34259526
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataa 46  Q
    |||||||||||||||||||||||||||||    
T  34259554 gcttgcaatttcttatgtacgccctataa 34259526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 24694743 - 24694830
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccactgttt 104  Q
    |||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||    
T  24694743 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgccactgttt 24694830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 11084646 - 11084562
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||         |||||| ||||||||||||||||||||||||||||    
T  11084646 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccggactttacaatattcctggctccgccactg 11084562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 9231946 - 9232030
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccactg 101  Q
    ||||||||||||||||||| |||||||||||| |||||||          |||||||||||||||||||||||||||||||||||    
T  9231946 gcttgcaatttcttatgtatgccctataaatgtgttgcaattttttttttgcccgggctttacaatattcctggctccgccactg 9232030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Original strand, 14309890 - 14309930
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa 58  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  14309890 gcttgcaatttcttatgtacgccctataaatgtgttgcaaa 14309930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 13627568 - 13627494
Alignment:
Q  26 tttcttatgtacgccctataaatgcgttgcaaannnnnnnngcccgggctttacaatattcctggctccgccact 100  Q
    ||||||||||||| |||||||||  ||||||||        |||||||||||| |||||||||||||||||||||    
T  13627568 tttcttatgtacgtcctataaatatgttgcaaaatttttttgcccgggctttagaatattcctggctccgccact 13627494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 1728039 - 1728073
Alignment:
Q  67 gcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||| ||||||||||||||    
T  1728039 gcccgggctttacaatattcttggctccgccactg 1728073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 2e-20; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 52632554 - 52632467
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccactgttt 104  Q
    |||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||||||    
T  52632554 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgccactgttt 52632467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 37801356 - 37801442
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactgtt 103  Q
    |||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||||||    
T  37801356 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgccactgtt 37801442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 25954786 - 25954702
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||||    
T  25954786 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgccactg 25954702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 34241029 - 34240944
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccactgt 102  Q
    |||||||||||||||||||||||||||||||| |||| |||         ||||||||||||||||||||||||||||||||||||    
T  34241029 gcttgcaatttcttatgtacgccctataaatgtgttgtaaaattttttttgcccgggctttacaatattcctggctccgccactgt 34240944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 49284391 - 49284309
Alignment:
Q  20 ttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||| ||||||||         ||||||| |||||||||||||||||||||||||||    
T  49284391 ttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggttttacaatattcctggctccgccactg 49284309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 1535807 - 1535726
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgcca 98  Q
    ||||||||||||||||||| |||||||||||| ||||||||         ||||||||||||||||||||||||||||||||    
T  1535807 gcttgcaatttcttatgtatgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgcca 1535726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 16338336 - 16338421
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa-annnnnnnngcccgggctttacaatattcctggctccgccactgt 102  Q
    |||||||||||||||||||||||||||||||| |||||||          ||||||||||||||||||| ||||||||||||||||    
T  16338336 gcttgcaatttcttatgtacgccctataaatgtgttgcaattttttttttgcccgggctttacaatatttctggctccgccactgt 16338421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 35018972 - 35018886
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccactgtt 103  Q
    |||||||||||||||||||| || |||||||| ||||||||         | |||||||||||||||||||||||||||||||||||    
T  35018972 gcttgcaatttcttatgtacaccttataaatgtgttgcaaatttttttttgtccgggctttacaatattcctggctccgccactgtt 35018886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 31377425 - 31377341
Alignment:
Q  18 gcttgcaatttcttatgtacgcc-ctataaatgcgttgcaaannnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||  || ||||||||| |||||||         ||||||||||||||||| |||||||||||||||||    
T  31377425 gcttgcaatttcttatgtaaaccgctataaatgtgttgcaatttttttttgcccgggctttacaataatcctggctccgccactg 31377341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 46583633 - 46583716
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccact 100  Q
    ||||||||||||||||||||||| |||||||| |||| |||         |||||| |||||||||||||||| ||||||||||    
T  46583633 gcttgcaatttcttatgtacgccatataaatgtgttgtaaatttttttttgcccggactttacaatattcctgactccgccact 46583716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 40277380 - 40277461
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgcca 98  Q
    |||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||    
T  40277380 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgcca 40277461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 14186530 - 14186614
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||         ||||| |||||||||||||||||||||||||||||    
T  14186530 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttttttttgcccgagctttacaatattcctggctccgccactg 14186614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 14942136 - 14942220
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccactg 101  Q
    ||||||||||||||||||||||| |||||||| ||||||||         |||||||||||||||||||||||||||||||||||    
T  14942136 gcttgcaatttcttatgtacgccttataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgccactg 14942220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 42769850 - 42769931
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgcca 98  Q
    ||||||||||||||||||| |||||||||||| ||||||||         ||||||||||||||||||||||||||||||||    
T  42769850 gcttgcaatttcttatgtatgccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgcca 42769931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 19181584 - 19181500
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccactg 101  Q
    ||||||||||||||||||| |||||||||||| ||||||||         | |||||||||||||||||||||||||||||||||    
T  19181584 gcttgcaatttcttatgtatgccctataaatgtgttgcaaatttttttttgtccgggctttacaatattcctggctccgccactg 19181500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 29846478 - 29846439
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa 57  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  29846478 gcttgcaatttcttatgtacgccctataaatgtgttgcaa 29846439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 3956557 - 3956523
Alignment:
Q  67 gcccgggctttacaatattcctggctccgccactg 101  Q
    ||||||||||||||||| |||||||||||||||||    
T  3956557 gcccgggctttacaataatcctggctccgccactg 3956523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 98
Target Start/End: Complemental strand, 29846424 - 29846396
Alignment:
Q  70 cgggctttacaatattcctggctccgcca 98  Q
    |||||||||||||||||||||||||||||    
T  29846424 cgggctttacaatattcctggctccgcca 29846396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 22324632 - 22324548
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa-annnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||||||||||    
T  22324632 gcttgcaatttcttatgtacgccctataaatgtgttgcaattttttttttgcccgggctttacaatattcctggctccgccactg 22324548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 21525394 - 21525309
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactgt 102  Q
    |||||||||||||||||||||||||||||||| ||||||||         |||||| ||||||||||||||||||||| |||||||    
T  21525394 gcttgcaatttcttatgtacgccctataaatgtgttgcaaatttgtttttgcccggactttacaatattcctggctccaccactgt 21525309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 33934461 - 33934546
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa--nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| ||||||||          ||||| |||||||||||||||| ||||||||||||    
T  33934461 gcttgcaatttcttatgtacgccctataaatgtgttgcaaaatttttttttgcccgagctttacaatattcctagctccgccactg 33934546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 26021431 - 26021391
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa 58  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  26021431 gcttgcaatttcttatgtacgccctataaatgtgttgcaaa 26021391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 35806830 - 35806746
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||| ||||||||||| ||||||||         |||||| ||||| ||||||||||||||||||||||    
T  35806830 gcttgcaatttcttatgtacaccctataaatgtgttgcaaatttttttttgcccggactttagaatattcctggctccgccactg 35806746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 42013908 - 42013822
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa-annnnnnnngcccgggctttacaatattcctggctccgccactgtt 103  Q
    |||||||||||||||||||||||||||||||| |||| ||          ||||||||||||||||||| | |||||||||||||||    
T  42013908 gcttgcaatttcttatgtacgccctataaatgtgttgaaattttttttttgcccgggctttacaatatttcaggctccgccactgtt 42013822  T

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Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 42072414 - 42072383
Alignment:
Q  67 gcccgggctttacaatattcctggctccgcca 98  Q
    ||||||||||||||||||||||||||||||||    
T  42072414 gcccgggctttacaatattcctggctccgcca 42072383  T

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Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 23218521 - 23218437
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaannnnnnnn-gcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||| ||||||||||| ||||||||         |||||||||||||||||||||||||||||||||||    
T  23218521 gcttgcaatttcttatgtactccctataaatgtgttgcaaatttttttttgcccgggctttacaatattcctggctccgccactg 23218437  T

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Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 15631649 - 15631568
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgcca 98  Q
    ||||||||||||||||||||||||||||||||||||| |||         ||| ||||||||||||||||||||||||||||    
T  15631649 gcttgcaatttcttatgtacgccctataaatgcgttgtaaatttttttttgcctgggctttacaatattcctggctccgcca 15631568  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 16618662 - 16618753
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa--annnnnnnngcccgggctttacaatattcctggctccgccactgtttgaa 107  Q
    |||||||||||||||||||||||||||||||| |||||||           ||||||||||||||||||| ||| |||||||||||||||||    
T  16618662 gcttgcaatttcttatgtacgccctataaatgtgttgcaatttttttttttgcccgggctttacaatatttctgactccgccactgtttgaa 16618753  T

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Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 37169125 - 37169209
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgccactg 101  Q
    |||||||||||||||||||||||||||||||| || |||||         ||||||||||||||||||||||||||| |||||||    
T  37169125 gcttgcaatttcttatgtacgccctataaatgtgtggcaaatttttttttgcccgggctttacaatattcctggctctgccactg 37169209  T

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Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 6257502 - 6257580
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgc-aaannnnnnnngcccgggctttacaatattcctggctccg 95  Q
    |||||||||||||||| ||||||||||||||| ||||| |||        |||||| ||||||||||||||||||||||    
T  6257502 gcttgcaatttcttatatacgccctataaatgtgttgcaaaattttttttgcccggactttacaatattcctggctccg 6257580  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 38397634 - 38397548
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa-annnnnnnngcccgggctttacaatattcctggctccgccactgtt 103  Q
    ||||||||||||||||||||| |||||||||| |||||||          |||| ||||||| ||||||||||||||||||||||||    
T  38397634 gcttgcaatttcttatgtacgtcctataaatgtgttgcaatttgttttttgcccaggctttataatattcctggctccgccactgtt 38397548  T

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Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 39862579 - 39862659
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaaa-nnnnnnnngcccgggctttacaatattcctggctccgcc 97  Q
    |||||||||||||||| ||||||||| ||||| ||||||||         |||| ||||||||||||||||||||||||||    
T  39862579 gcttgcaatttcttatatacgccctaaaaatgtgttgcaaatttttttttgcccaggctttacaatattcctggctccgcc 39862659  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 10081130 - 10081096
Alignment:
Q  67 gcccgggctttacaatattcctggctccgccactg 101  Q
    ||||||||||||||||| |||||||||||||||||    
T  10081130 gcccgggctttacaataatcctggctccgccactg 10081096  T

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Target: scaffold0079 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 54524 - 54439
Alignment:
Q  18 gcttgcaatttcttatgtacgccctataaatgcgttgcaa-annnnnnnngcccgggctttacaatattcctggctccgccactgt 102  Q
    |||||||||||||||||||||||||||||||| |||||||          ||||||||||||||||||| ||||||||||||||||    
T  54524 gcttgcaatttcttatgtacgccctataaatgtgttgcaattttttttttgcccgggctttacaatatttctggctccgccactgt 54439  T

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