View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9031_high_6 (Length: 428)
Name: NF9031_high_6
Description: NF9031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9031_high_6 |
 | |
|
| [»] scaffold0129 (2 HSPs) |
| | |
|
| [»] scaffold0009 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0129 (Bit Score: 310; Significance: 1e-174; HSPs: 2)
Name: scaffold0129
Description:
Target: scaffold0129; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 38564 - 38251
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38564 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
38465 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38464 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
38365 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38364 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
38265 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
38264 |
ccaggtgaaaatga |
38251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0129; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 39466 - 39392
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
39466 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
39392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 310; Significance: 1e-174; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 32741713 - 32741400
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32741713 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
32741614 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32741613 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
32741514 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32741513 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
32741414 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
32741413 |
ccaggtgaaaatga |
32741400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 35217137 - 35217450
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35217137 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
35217236 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35217237 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
35217336 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35217337 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
35217436 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
35217437 |
ccaggtgaaaatga |
35217450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 42989673 - 42989986
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989673 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
42989772 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
42989773 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcattcagctagtgacgttgtaggaaattt |
42989872 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42989873 |
ggatgaatacacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
42989972 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
42989973 |
ccaggtgaaaatga |
42989986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 9313056 - 9312743
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9313056 |
aagatgcattaccatagaaggttttaccgcaaaatattggaaggttatgaggtgggataatctgatccagggaagataaatgtccttgatgctatcaatt |
9312957 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9312956 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagtgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
9312857 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9312856 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
9312757 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
9312756 |
ccaggtgaaaatga |
9312743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 38223893 - 38224206
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223893 |
aagatgcattatcgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
38223992 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38223993 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagtgaattgctttcgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
38224092 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38224093 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
38224192 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
38224193 |
ccaggtgaaaatga |
38224206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 23716734 - 23716421
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23716734 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatttgatccagggaagataaatgtccttgatgctatcaatt |
23716635 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23716634 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactataaaattcgttcagctagtgacgttgtaggaaattt |
23716535 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
23716534 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgaaaatctaatgaactac |
23716435 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
23716434 |
ctaggtgaaaatga |
23716421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 209 - 409
Target Start/End: Complemental strand, 16727573 - 16727373
Alignment:
| Q |
209 |
ttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaatttggatgaatccact |
308 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16727573 |
ttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcattcagctagtgacgttgtaggaaatttggatgaatccact |
16727474 |
T |
|
| Q |
309 |
tttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatg |
408 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
16727473 |
tttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccatgtgaaaatg |
16727374 |
T |
|
| Q |
409 |
a |
409 |
Q |
| |
|
| |
|
|
| T |
16727373 |
a |
16727373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 44501761 - 44501677
Alignment:
| Q |
325 |
aagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
44501761 |
aagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacctaggtgaaaatga |
44501677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 32742615 - 32742541
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
32742615 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
32742541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 35216235 - 35216309
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
35216235 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
35216309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 9313958 - 9313884
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9313958 |
agagagataatcctgtaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
9313884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 23717636 - 23717562
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23717636 |
agagagataatcctgaaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
23717562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 38222991 - 38223065
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
38222991 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgaggaaaaatttcagttgaaagttagtc |
38223065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 42988771 - 42988845
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
42988771 |
agagagataatcctgcaagcacacaaaaagacttgtagagatggcttgagggaaaatttcagttaaaagttagtc |
42988845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 3523393 - 3523706
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3523393 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
3523492 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3523493 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
3523592 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3523593 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
3523692 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3523693 |
ccaggtgaaaatga |
3523706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 10268702 - 10268389
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10268702 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
10268603 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10268602 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
10268503 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10268502 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
10268403 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
10268402 |
ccaggtgaaaatga |
10268389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 336249 - 336562
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
336249 |
aagatgcattaccgtagaaggttttaccgcaaaatattggtaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
336348 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
336349 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattacttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
336448 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
336449 |
ggatgaatccacttttgatgaagaaactcaagacctccaaactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
336548 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
336549 |
ccaggtgaaaatga |
336562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 25519180 - 25519493
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25519180 |
aagatgcattaccatataaggttttaccgcaaaatattggaaggttatgaggtgggacaaactgatccagggaagataaatgtccttgatgctatcaatt |
25519279 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25519280 |
tggcaatcccagcttggacgatggatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
25519379 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25519380 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
25519479 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
25519480 |
ccaggtgaaaatga |
25519493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 249 - 409
Target Start/End: Original strand, 32591968 - 32592128
Alignment:
| Q |
249 |
ttccgacactgtaaaattcgttcagctagtgacgttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatc |
348 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
32591968 |
ttccgacactgtaaaattcgttcagctagtgacgttgtaggaaatttggatgaattcacttttgatgaagaaactcaagacatccagactatgatcaatc |
32592067 |
T |
|
| Q |
349 |
aatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32592068 |
aatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
32592128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 3522491 - 3522565
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
3522491 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
3522565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 10269604 - 10269530
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10269604 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
10269530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 335380 - 335454
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
335380 |
agagagataattctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
335454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 43311498 - 43311424
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43311498 |
agagagataatcctgcaagcacataaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
43311424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 310; Significance: 1e-174; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 14219694 - 14220007
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219694 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
14219793 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219794 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
14219893 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14219894 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
14219993 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
14219994 |
ccaggtgaaaatga |
14220007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 30703600 - 30703287
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30703600 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgtgacaatctgatccagggaagataaatgtccttgatgctatcaatt |
30703501 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
30703500 |
tggcaatcccagcttgaacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactataaaattcgttcagctagtgacgttgtaggaaattt |
30703401 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30703400 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaacgtggctatcgtaataagatggatatcgacaatctaatgaactac |
30703301 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
30703300 |
ccaggtgaaaatga |
30703287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 30704501 - 30704427
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
30704501 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
30704427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 14218792 - 14218866
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14218792 |
agagagataatcttgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
14218866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 310; Significance: 1e-174; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 43488794 - 43489107
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488794 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
43488893 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488894 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
43488993 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43488994 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
43489093 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
43489094 |
ccaggtgaaaatga |
43489107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 3616010 - 3616323
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3616010 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
3616109 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3616110 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
3616209 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3616210 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgattaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
3616309 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3616310 |
ccaggtgaaaatga |
3616323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 37828069 - 37827756
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37828069 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgttgctatcaatt |
37827970 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37827969 |
tggcaaccccagcttggacgatagatgttcgaaaagaaacaatagcgaattgctttcgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
37827870 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37827869 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctattgtaataagatggatatcgacaatctaatgaactac |
37827770 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
37827769 |
ccaggtgcaaatga |
37827756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 23416387 - 23416700
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23416387 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccaggtaagataaatgtccttgatgctatcaatt |
23416486 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
23416487 |
tggcaatcccagcttggacgatagatgttcaaaaagaaacaatagcgaattgctcccgacactgtaaaatttgttcagctagcgacgttgtaggaaattt |
23416586 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
23416587 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatattgacaatctaatgaactac |
23416686 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
23416687 |
ccaggtgaaaatga |
23416700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 37038254 - 37037957
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038254 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
37038155 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
37038154 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagtgaattgcttccga----------------cagctagtgacgttgtaggaaattt |
37038071 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37038070 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
37037971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 315 - 409
Target Start/End: Original strand, 2027389 - 2027483
Alignment:
| Q |
315 |
gaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2027389 |
gaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
2027483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 2026499 - 2026573
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2026499 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
2026573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 3615108 - 3615182
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
3615108 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
3615182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 43487892 - 43487966
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
43487892 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
43487966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 23415485 - 23415559
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
23415485 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaagtttcagttgaaagttagtc |
23415559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 37039156 - 37039082
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37039156 |
agagagataatcctgcaagcacacaaaaagacttgcagggatggcttgagggaaaatttcagttgaaagttagtc |
37039082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 310; Significance: 1e-174; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 1085087 - 1084774
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1085087 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
1084988 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1084987 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
1084888 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1084887 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
1084788 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
1084787 |
ccaggtgaaaatga |
1084774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 45107620 - 45107933
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107620 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
45107719 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107720 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
45107819 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45107820 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
45107919 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
45107920 |
ccaggtgaaaatga |
45107933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 10486175 - 10486488
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10486175 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
10486274 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
10486275 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagtgaatttcttccgacactgtaaaattcgttcagctagtgatgttgtaggaaattt |
10486374 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10486375 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
10486474 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
10486475 |
ctaggtgaaaatga |
10486488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 49546166 - 49545853
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49546166 |
aagatgcattaccttagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
49546067 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
49546066 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgatgtaggaaattt |
49545967 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
49545966 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgaaaatttaatgaactac |
49545867 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
49545866 |
ccaggtgaaaatga |
49545853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 174 - 409
Target Start/End: Original strand, 5926648 - 5926883
Alignment:
| Q |
174 |
aatgtccttgatgctatcaatttggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcag |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5926648 |
aatgtccttgatgctatcaatttggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcag |
5926747 |
T |
|
| Q |
274 |
ctagtgacgttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatgga |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5926748 |
ctagtgacgttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatgaa |
5926847 |
T |
|
| Q |
374 |
tatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
5926848 |
tatcgacaatctaatgaactacccaggtgaaaatga |
5926883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 174 - 409
Target Start/End: Complemental strand, 27182474 - 27182239
Alignment:
| Q |
174 |
aatgtccttgatgctatcaatttggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcag |
273 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
27182474 |
aatgtccttgatgctatcaatttggcaatcccaacttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcag |
27182375 |
T |
|
| Q |
274 |
ctagtgacgttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatgga |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27182374 |
ctagtgacgttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatgga |
27182275 |
T |
|
| Q |
374 |
tatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
27182274 |
tatcgacaatctaatgaactacccaggtgaaaatga |
27182239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 219 - 409
Target Start/End: Original strand, 14677924 - 14678114
Alignment:
| Q |
219 |
gatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaatttggatgaatccacttttgatgaag |
318 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677924 |
gatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttaagctagtgacgttgtaggaaatttggatgaatccacttttgatgaag |
14678023 |
T |
|
| Q |
319 |
aaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14678024 |
aaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
14678114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 317 - 409
Target Start/End: Complemental strand, 17195206 - 17195114
Alignment:
| Q |
317 |
agaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17195206 |
agaaactcaagacctccagactatgatcaatcaatatggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
17195114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 1085989 - 1085915
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1085989 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
1085915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 5926377 - 5926451
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
5926377 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
5926451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 10485273 - 10485347
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10485273 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
10485347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 14676959 - 14677033
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14676959 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
14677033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 17195774 - 17195700
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17195774 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
17195700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 21395526 - 21395600
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
21395526 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
21395600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 45106718 - 45106792
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
45106718 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
45106792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 49550491 - 49550417
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
49550491 |
agagagataatcctgcaagcatacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
49550417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 27182746 - 27182671
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaa-gacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27182746 |
agagagataatcctgcaagcacacaaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
27182671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 14677861 - 14677926
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgat |
161 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14677861 |
aagatgcattaccgtagaaggttttatcgcaaaatattggaaggttatgaggtgggacaatctgat |
14677926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 21398221 - 21398273
Alignment:
| Q |
357 |
tatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21398221 |
tatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
21398273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 310; Significance: 1e-174; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 44552795 - 44552482
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44552795 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
44552696 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44552695 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
44552596 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44552595 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
44552496 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
44552495 |
ccaggtgaaaatga |
44552482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 38517657 - 38517344
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38517657 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
38517558 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38517557 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgctttcgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
38517458 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38517457 |
ggatgaatccacttttgatgacgaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
38517358 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
38517357 |
ccaggtgaaaatga |
38517344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 268 - 409
Target Start/End: Original strand, 34946421 - 34946562
Alignment:
| Q |
268 |
gttcagctagtgacgttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataa |
367 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34946421 |
gttcagctagtgaagttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataa |
34946520 |
T |
|
| Q |
368 |
gatggatatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
34946521 |
gatggatatcgacaatctaatgaactacccatgtgaaaatga |
34946562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 34946295 - 34946424
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34946295 |
aagatgcattaacgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
34946394 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttc |
225 |
Q |
| |
|
|||||||||||||||| | |||||||||| |
|
|
| T |
34946395 |
tggcaatcccagcttgttccatagatgttc |
34946424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 27644795 - 27644721
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
27644795 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
27644721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 44553697 - 44553623
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
44553697 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
44553623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 34945393 - 34945467
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
34945393 |
agagagataatcctgcaagcacacaaaaagactagcagagatggcttgagggaaaatttcagttgaaagttagtc |
34945467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 38518559 - 38518485
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
38518559 |
agagagataatcatgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
38518485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 20394709 - 20394780
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20394709 |
agagagataatcctgcaagcacacaa---gacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
20394780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 310; Significance: 1e-174; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 12533682 - 12533995
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533682 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
12533781 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533782 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
12533881 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12533882 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
12533981 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
12533982 |
ccaggtgaaaatga |
12533995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 2273306 - 2273619
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2273306 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggccaatctgatccagggaagataaatgtccttgatgctatcaatt |
2273405 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2273406 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
2273505 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2273506 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
2273605 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
2273606 |
ccaggtgaaaatga |
2273619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 3535620 - 3535933
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535620 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
3535719 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
3535720 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcattcagctagtgatgttgtaggaaattt |
3535819 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3535820 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
3535919 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3535920 |
ccaggtgaaaatga |
3535933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 7356011 - 7355698
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
7356011 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatatagggaagataaatgtccttgatgctatcaatt |
7355912 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7355911 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
7355812 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7355811 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
7355712 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
7355711 |
ccaggtgaaaatga |
7355698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 157 - 350
Target Start/End: Complemental strand, 30898586 - 30898393
Alignment:
| Q |
157 |
ctgatccagggaagataaatgtccttgatgctatcaatttggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgaca |
256 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30898586 |
ctgatccagggaagataaatgtccttgatgctatcaatttggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgaca |
30898487 |
T |
|
| Q |
257 |
ctgtaaaattcgttcagctagtgacgttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaa |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30898486 |
ctgtaaaattcgttcagctagtgacgttgtaggaaatttggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaa |
30898393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 3534718 - 3534792
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
3534718 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
3534792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 12532778 - 12532852
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12532778 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
12532852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 7356910 - 7356836
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
7356910 |
agagagataatcctgcaagcacacaaaaagacttgcagagatgacttgagggaaaatttcagttgaaagttagtc |
7356836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 2272404 - 2272471
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaa |
83 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
2272404 |
agagagataatcctgcaagcacacaaaaagacttgtagagatggcttgaggaaaaatttcagttgaaa |
2272471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 310; Significance: 1e-174; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 96 - 409
Target Start/End: Complemental strand, 16641319 - 16641006
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641319 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
16641220 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641219 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
16641120 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16641119 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
16641020 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
16641019 |
ccaggtgaaaatga |
16641006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 8363133 - 8363446
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8363133 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
8363232 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8363233 |
tggcaatcccaacttggacgatagatgttcgaaaagaaacaatagcgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
8363332 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8363333 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
8363432 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8363433 |
ccaggtgaaaatga |
8363446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 96 - 409
Target Start/End: Original strand, 41774634 - 41774947
Alignment:
| Q |
96 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774634 |
aagatgcattaccgtagaaggttttaccgcaaaatattggaaggttatgaggtgggacaatctgatccagggaagataaatgtccttgatgctatcaatt |
41774733 |
T |
|
| Q |
196 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagcgaattgattccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
295 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774734 |
tggcaatcccagcttggacgatagatgttcgaaaagaaacaatagtgaattgcttccgacactgtaaaattcgttcagctagtgacgttgtaggaaattt |
41774833 |
T |
|
| Q |
296 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41774834 |
ggatgaatccacttttgatgaagaaactcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactac |
41774933 |
T |
|
| Q |
396 |
ccaggtgaaaatga |
409 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
41774934 |
ctaggtgaaaatga |
41774947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 322 - 409
Target Start/End: Complemental strand, 22146983 - 22146896
Alignment:
| Q |
322 |
ctcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22146983 |
ctcaagacctccagactatgatcaatcaatgtggctatcgtaataagatggatatcgacaatctaatgaactacccaggtgaaaatga |
22146896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 16642221 - 16642147
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
16642221 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
16642147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 41773732 - 41773806
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaaattagtc |
90 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
41773732 |
agagagataatcctgcaagcacacaaaaagacttgcagagatggcttgagggaaaatttcagttgaaagttagtc |
41773806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 15640 - 15608
Alignment:
| Q |
16 |
agagagataatcctgcaagcacacaaaaagact |
48 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
15640 |
agagagataatcctgcaagcacacaaaaagact |
15608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University