View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9032_high_3 (Length: 451)
Name: NF9032_high_3
Description: NF9032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9032_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 81 - 404
Target Start/End: Complemental strand, 32571166 - 32570843
Alignment:
| Q |
81 |
ggaccatttgttcttcttctgccatttggaccccatgctgtggaaaagaaagaaaaaacagcaaaccattctcatgaaaattgtttctttcttcaaactt |
180 |
Q |
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| T |
32571166 |
ggaccatttgttcttcttctgccatttggaccccatgctgtggaaaagaaagaaaaaacagcaaaccattctcatgaaaattgtttctttcttcaaactt |
32571067 |
T |
|
| Q |
181 |
taacctttaacaacggaatcttcatttcacacacataatatattaacacaatacacgtgtttatgtttagccaaaacattatcatcaccttttccttgat |
280 |
Q |
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| T |
32571066 |
taacctttaacaacggaatcttcatttcacacacataatatattaacacaatacacgtgtttatgtttagccaaaacattatcatcaccttttccttgat |
32570967 |
T |
|
| Q |
281 |
gcttcctatctcatgcaaaataagcttttagattgattcttcctaatgaaaccttctttattcgttttcttcaagatttaaacaaaaacgtgactttggt |
380 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32570966 |
gcttcctatctcatgcaaaataagcttttagattgattcttcctaatgaaaccttctttattcgttttcttcaagatttaaacaaaaacgtgactttggt |
32570867 |
T |
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| Q |
381 |
atgttttataatacatacataacc |
404 |
Q |
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|||||||||||||||||||||||| |
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| T |
32570866 |
atgttttataatacatacataacc |
32570843 |
T |
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