View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9032_low_4 (Length: 533)
Name: NF9032_low_4
Description: NF9032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9032_low_4 |
 | |
|
| [»] scaffold0264 (1 HSPs) |
| | |
|
| [»] scaffold0074 (2 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 419; Significance: 0; HSPs: 13)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 11 - 461
Target Start/End: Complemental strand, 20083495 - 20083045
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20083495 |
agattattctacaaatgaagtcattaagtgcattcagattggtctattatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
20083396 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20083395 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
20083296 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttatttaactctata |
310 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
20083295 |
ctactcaatctaccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttatttagctctata |
20083196 |
T |
|
| Q |
311 |
attgttgtcaacaaactatgttttctagtatcaattagtataatttagaaatgatttaggaaatgaatatttgtaatttgtatcatgtacaagggcattg |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
20083195 |
attgttgtcaacaaactatgttttctagtatcaattagtataattttgaaatgatttaggaaatgattgtttgtaatttgtatcatgtacaagggcattg |
20083096 |
T |
|
| Q |
411 |
ttccatataacctcatataccctttaatgatgaaatatttgttagtgatgg |
461 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
20083095 |
ttccatataacctcatataccctttaatgatgaaattttggttagtgatgg |
20083045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 11 - 397
Target Start/End: Original strand, 22209684 - 22210072
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||| |||||||| || | ||||||||||||| |
|
|
| T |
22209684 |
agattattctacaaatgaagtaattaagtacattcagattggtctattatgtgttcaaaatgacccggatgctagaccttcaattgcgacagttgcttct |
22209783 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| |
|
|
| T |
22209784 |
tatcttagcagttatgcaattgaattaccaactccaaaagaacctgcgtttttcttgcatggtagaacttattcggacgttcttgcactagaatcaagtt |
22209883 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaatttta-tttaactctat |
309 |
Q |
| |
|
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |
|
|
| T |
22209884 |
ctactcaatctgccaatagttctgcacaattttcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttattttagttgtaa |
22209983 |
T |
|
| Q |
310 |
aattgttgtcaacaaactatgttttctagtatcaattagtataa-tttagaaatgatttaggaaatgaatatttgtaatttgtatcatg |
397 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22209984 |
aattgttgtcaacaaactatgttttctagtatcaattagtataactttgaaaaggatttaggaaatgaatatttgtaatatgtatcatg |
22210072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 11 - 400
Target Start/End: Complemental strand, 18995141 - 18994750
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||| || ||||||||||||||| |
|
|
| T |
18995141 |
agattattctgcaaatgaagtcattaaatgcattcagattggtctgttatgtgttcaaaatgacccgaatgctagaccttcaattgtgacagttgcttct |
18995042 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| |
|
|
| T |
18995041 |
tatcttagcagttatgcaattgaattaccaactccaaaagaacctgcgtttttcttgcatggtagaacttattccgacgttcttgcactagaatcaagtt |
18994942 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttat-ttaactctat |
309 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| || | ||| |
|
|
| T |
18994941 |
ctactcaatctgccaatagttctgtactattctcaatcaatcaaatgtctgcaagtacttttattcctcgatagtttattaatttttataatagttgtat |
18994842 |
T |
|
| Q |
310 |
aattgttgtcaacaaactatgttttctagtatcaattagtataa-tttagaaatgatttaggaaatgaatatttgtaatttgtatcatgtac |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | ||||| ||| |||||| | ||||||| | |||||||||||| ||||||||| |
|
|
| T |
18994841 |
aattgttgtcaacaaactatgttttctagtattaataaatataactttgaaaatgagtgaggaaatagagatttgtaatttgaatcatgtac |
18994750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 400
Target Start/End: Complemental strand, 18979194 - 18978827
Alignment:
| Q |
16 |
attctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttcttatct |
115 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||| | |||||||||||| ||||||||||| ||||||||| |||||||||| |
|
|
| T |
18979194 |
attctacaaatgaagtcattaagtgcatttagattggtcgattatgtgttcgaaatgacccggatgt-agaccttcgattgtgacagttccttcttatct |
18979096 |
T |
|
| Q |
116 |
tagcagttatgcagttgaattaccaactccaccagaacctgcgtttttc-ttgcatggtagaacttattcaaatgttcttgcacaagaatcaagttctac |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||||||| |||||||| |
|
|
| T |
18979095 |
tagcagttatgcagttgaattaccaactccgcaagaacctgcgttttttattgcatggtagaacatattcaaa-------------------agttctac |
18979015 |
T |
|
| Q |
215 |
tcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaatttta-tttaactctataatt |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |||| |
|
|
| T |
18979014 |
tcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttattttagttgtacaatt |
18978915 |
T |
|
| Q |
314 |
gttgtcaacaaactatgttttctagtatcaattagtataa-tttagaaatgatttaggaaatgaatatttgtaatttgtatcatgtac |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18978914 |
gttgtcaacaaactatgttttctagtatcaattagtaaaactttgaaaaggatttaggaaatgaatatttgtaatttgtatcatgtac |
18978827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 11 - 299
Target Start/End: Complemental strand, 20235466 - 20235178
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||| ||||| |
|
|
| T |
20235466 |
agattattctacaaatgaagtcattaagtgcattcagattggtctattatgtgttcaacatgacccggatgctagaccttcaatctcgacagtttcttct |
20235367 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
20235366 |
taccttagcagttatgcagttgaattaccaactccgaaagaacctgcgtttttcttgcatggtagaaagaattcaaacattcttgcacaagaatcaagtt |
20235267 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttat |
299 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
20235266 |
ctactcaatctgccaatagctctgcactattctcaaacaatcaaatgtccgcaagtacttttattcctctatagtttattaaattttat |
20235178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 11 - 299
Target Start/End: Complemental strand, 22129450 - 22129162
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||||||| ||||| |
|
|
| T |
22129450 |
agattattctacaaatgaagtcattaagtgcattcagattggtctattatgtgttcaacatgacccggatgctagaccttcaatctcgacagtttcttct |
22129351 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
22129350 |
taccttagcagttatgcagttgaattaccaactccgaaagaacctgcgtttttcttgcatggtagaaagaattcaaacattcttgcacaagaatcaagtt |
22129251 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttat |
299 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22129250 |
ctactcaatctgccaatagctctgcactattctcaaacaatcaaatgtccgcaagtacttttattcctctatagtttattaaattttat |
22129162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 267
Target Start/End: Complemental strand, 18990551 - 18990296
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
18990551 |
agattattctacaaatgaagtcattaagtgcattcagattggtctattatgtgttcaaaatgacccggatgctagaccttcgatcgtgacagttgcttct |
18990452 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||| |
|
|
| T |
18990451 |
tatcttagcatttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaggg-attcaaacgttcttgcacaagaatctagtt |
18990353 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagta |
267 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
18990352 |
ctactcaatctgcccatagttctgcattattttcaaacaatcaaatgtcggcaagta |
18990296 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 22085617 - 22085446
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||||||| |||||||||||| ||||||| || || |||||||| ||| ||||| |||||||| |
|
|
| T |
22085617 |
agattattctaaaactgaagtcattaagtgcattcagattggtctattatgtgttcaaaatgacccagaggctagaccttcaatcttgacaattgcttct |
22085518 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttat |
182 |
Q |
| |
|
|||||||||||| || || |||| ||||||||||||| | ||||||| |||||| |||| ||||||| |||| |
|
|
| T |
22085517 |
tatcttagcagtcattcaattgagttaccaactccacaacaacctgcatttttcctgcaaggtagaaattat |
22085446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 22001558 - 22001393
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||||||| |||||||||||| ||||||| || || |||||||| ||| ||||| |||||||| |
|
|
| T |
22001558 |
agattattctaaaactgaagtcattaagtgcattcagattggtctattatgtgttcaaaatgacccagaggctagaccttcaatcttgacaattgcttct |
22001459 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtaga |
176 |
Q |
| |
|
|||||||||||| || || |||| |||| |||||||| | ||||||| |||||| |||| |||||| |
|
|
| T |
22001458 |
tatcttagcagtcattcaattgagttacgaactccacaacaacctgcatttttcctgcaaggtaga |
22001393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 11 - 178
Target Start/End: Complemental strand, 21967288 - 21967121
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||| ||||| || |||||||||||||||||||||||||||||| |||||||||||| |||| || || || |||||||| ||| ||||| |||||||| |
|
|
| T |
21967288 |
agatttttctaaaactgaagtcattaagtgcattcagattggtctattatgtgttcaaaatgatccagaggctagaccttcaatcttgacaattgcttct |
21967189 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaac |
178 |
Q |
| |
|
|||||||||||| || || |||| ||||||||||||| | ||||||| |||||| |||| |||||||| |
|
|
| T |
21967188 |
tatcttagcagtcattcaattgagttaccaactccacaacaacctgcatttttcctgcaaggtagaac |
21967121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 21967734 - 21967569
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||| ||||| || |||||||||||||||||||||||||||||| |||||||||||| |||| || || || |||||||| ||| ||||| |||||||| |
|
|
| T |
21967734 |
agatttttctaaaactgaagtcattaagtgcattcagattggtctattatgtgttcaaaatgatccagaggctagaccttcaatcttgacaattgcttct |
21967635 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtaga |
176 |
Q |
| |
|
|||||||||||| || || |||| ||||||||||||| | ||||||| |||||| |||| |||||| |
|
|
| T |
21967634 |
tatcttagcagtcattcaattgagttaccaactccacaacaacctgcatttttcctgcaaggtaga |
21967569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 472
Target Start/End: Complemental strand, 18994695 - 18994622
Alignment:
| Q |
398 |
tacaagggcattgttccatataacctcatataccctttaatgatgaaatatttgttagtgatggaaacacttgga |
472 |
Q |
| |
|
|||||||||||||| || |||||||||| |||||||||||||| |||| || |||| ||| ||||||||||||| |
|
|
| T |
18994695 |
tacaagggcattgtgcccaataacctcatttaccctttaatgattaaattttggttaatga-ggaaacacttgga |
18994622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 519
Target Start/End: Complemental strand, 20083046 - 20083015
Alignment:
| Q |
488 |
ggtgtttaattatgaatttgtttagaaagatg |
519 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
20083046 |
ggtgtttaattatgaatttgtttagaaagatg |
20083015 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 11 - 396
Target Start/End: Complemental strand, 14976 - 14591
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||| || ||||||||||||||| |
|
|
| T |
14976 |
agattattctacaaatgaagtcattaagtgcattcagattggtctattatgtgttcaaaatgacccgaatgctagaccttcaattgtgacagttgcttct |
14877 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
14876 |
tatcttagcagttatgcaattgatttaccaactccacaagaacctgcgtttttcttgcatggtagaacttattccgacgttcttgcacaagaatcaagtt |
14777 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttatttaactctata |
310 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
14776 |
ctactcaatctgccaatagttctgcacttttctcattcaatcaaatgtctgcaagtacttttattcctcgatagtttattaaattttatttagctctata |
14677 |
T |
|
| Q |
311 |
attgttgtcaacaaactatgttttctagtatcaattagtataatttagaaatgatttaggaaatgaatatttgtaatttgtatcat |
396 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14676 |
attgttgtcaacaaactatgttttctagtatcaattagtataaatttgaaatgatttaggaaatgaatatttgtaatttgtgtcat |
14591 |
T |
|
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Target: scaffold0074 (Bit Score: 252; Significance: 1e-140; HSPs: 2)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 11 - 400
Target Start/End: Original strand, 50318 - 50709
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||| || ||||||||||||||| |
|
|
| T |
50318 |
agattattctacaaatgaagtcattaaatgcattcagattggtctgttatgtgttcaaaatgacccgaatgctagaccttcaattgtgacagttgcttct |
50417 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
50418 |
tatcttagcagttatgcaattgaattaccaactccaaaagaacctgcgtttttcttgcatggtagaacttattccgacgttcttgcacaagaatcaagtt |
50517 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaattttat-ttaactctat |
309 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||| || | ||| |
|
|
| T |
50518 |
ctactcaatctgccaatagttctgcactattctcaatcaatcaaatgtctgcaagtacttttattcctcgatagtttattaatttttataatagttgtat |
50617 |
T |
|
| Q |
310 |
aattgttgtcaacaaactatgttttctagtatcaattagtataa-tttagaaatgatttaggaaatgaatatttgtaatttgtatcatgtac |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | ||||| ||| |||||| | ||||||| | |||||||||||| ||||||||| |
|
|
| T |
50618 |
aattgttgtcaacaaactatgttttctagtattaataaatataactttgaaaatgagtgaggaaatagagatttgtaatttgaatcatgtac |
50709 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 472
Target Start/End: Original strand, 50764 - 50837
Alignment:
| Q |
398 |
tacaagggcattgttccatataacctcatataccctttaatgatgaaatatttgttagtgatggaaacacttgga |
472 |
Q |
| |
|
|||||||||||||| || |||||||||| |||||||||||||| |||| || |||| ||| ||||||||||||| |
|
|
| T |
50764 |
tacaagggcattgtgcccaataacctcatttaccctttaatgattaaattttggttaatga-ggaaacacttgga |
50837 |
T |
|
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Target: scaffold0007 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 11 - 374
Target Start/End: Original strand, 7852 - 8217
Alignment:
| Q |
11 |
agattattctacaaatgaagtcattaagtgcattcagattggtctgttatgtgttcaacatgacccggatgccagaccttcgatcgtgacagttgcttct |
110 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||| || ||||||||||||||| |
|
|
| T |
7852 |
agattattctacaaatgaagtcattaaatgcattcagattggtctgttatgtgttcaaaatgacccgaatgctagaccttcaattgtgacagttgcttct |
7951 |
T |
|
| Q |
111 |
tatcttagcagttatgcagttgaattaccaactccaccagaacctgcgtttttcttgcatggtagaacttattcaaatgttcttgcacaagaatcaagtt |
210 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
7952 |
tatcttagcagttatgcaattgaattaccaactccaaaagaacctgcgtttctcttgcatggtagaacttattccgacgttcttgcacaagaatcaagtt |
8051 |
T |
|
| Q |
211 |
ctactcaatctgccaatagttctgcattattctcaaacaatcaaatgtcggcaagtacttttattcctcgatagtttattaaatttta-tttaactctat |
309 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||| || | ||| |
|
|
| T |
8052 |
ctactcaatctgccaatagttctgcacttttctcatacaatcaaatgtctgcaagtacttttattcctcgatagtttattaatttttacaatatttgtat |
8151 |
T |
|
| Q |
310 |
aattgttgtcaacaaactatgttttctagtatcaattagtataa-tttagaaatgatttaggaaat |
374 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| || |||||||| ||| ||| |||||||||||| |
|
|
| T |
8152 |
aattgttgtcaacaaactatgttttctaatataaaatagtataagtttgaaaaggatttaggaaat |
8217 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 47593954 - 47593996
Alignment:
| Q |
26 |
tgaagtcattaagtgcattcagattggtctgttatgtgttcaa |
68 |
Q |
| |
|
|||||| ||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
47593954 |
tgaagttattaagtgcatacagattggtttgttatgtgttcaa |
47593996 |
T |
|
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