View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9035_low_10 (Length: 377)

Name: NF9035_low_10
Description: NF9035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9035_low_10
NF9035_low_10
[»] chr4 (64 HSPs)
chr4 (29-377)||(37547051-37547400)
chr4 (108-196)||(51717171-51717259)
chr4 (108-186)||(34116436-34116515)
chr4 (108-186)||(31658015-31658093)
chr4 (108-195)||(31275242-31275329)
chr4 (108-172)||(9162162-9162226)
chr4 (109-197)||(36444281-36444369)
chr4 (108-196)||(55927080-55927168)
chr4 (108-195)||(10994041-10994127)
chr4 (108-155)||(34974549-34974596)
chr4 (108-198)||(4896385-4896475)
chr4 (108-186)||(15596492-15596570)
chr4 (108-186)||(51389412-51389490)
chr4 (108-185)||(5123488-5123565)
chr4 (108-185)||(24337254-24337331)
chr4 (108-185)||(35580206-35580283)
chr4 (108-152)||(1031851-1031895)
chr4 (108-196)||(47998690-47998777)
chr4 (108-186)||(38160669-38160748)
chr4 (41-80)||(51039150-51039189)
chr4 (108-198)||(52891736-52891829)
chr4 (108-186)||(5234368-5234446)
chr4 (108-186)||(29384094-29384172)
chr4 (108-186)||(38952785-38952863)
chr4 (126-196)||(42915106-42915176)
chr4 (108-185)||(38844388-38844465)
chr4 (108-153)||(40409096-40409141)
chr4 (108-196)||(46173633-46173721)
chr4 (126-197)||(48372111-48372183)
chr4 (120-179)||(18499995-18500054)
chr4 (108-186)||(18874820-18874899)
chr4 (108-195)||(30778152-30778239)
chr4 (108-155)||(41952924-41952971)
chr4 (41-79)||(6370978-6371016)
chr4 (42-80)||(11997684-11997722)
chr4 (108-186)||(23690327-23690405)
chr4 (108-198)||(25523081-25523171)
chr4 (42-80)||(26885290-26885328)
chr4 (108-186)||(28480435-28480513)
chr4 (108-186)||(28481309-28481387)
chr4 (108-186)||(28482184-28482262)
chr4 (108-197)||(31240744-31240834)
chr4 (43-81)||(33093137-33093175)
chr4 (108-186)||(36512938-36513016)
chr4 (108-186)||(39844155-39844233)
chr4 (43-81)||(41119503-41119541)
chr4 (43-81)||(46173550-46173588)
chr4 (131-189)||(48493826-48493884)
chr4 (43-80)||(4896534-4896571)
chr4 (108-153)||(6594668-6594713)
chr4 (43-80)||(11064123-11064160)
chr4 (42-79)||(15596395-15596432)
chr4 (43-80)||(22257230-22257267)
chr4 (43-80)||(34116574-34116611)
chr4 (43-80)||(35017153-35017190)
chr4 (43-80)||(47014939-47014976)
chr4 (108-165)||(49194979-49195036)
chr4 (43-71)||(12638825-12638853)
chr4 (40-80)||(23347772-23347812)
chr4 (108-156)||(31048984-31049032)
chr4 (41-73)||(31240646-31240678)
chr4 (41-81)||(32365689-32365729)
chr4 (33-81)||(41262651-41262699)
chr4 (40-80)||(52392259-52392299)
[»] chr3 (62 HSPs)
chr3 (108-186)||(48945943-48946021)
chr3 (108-197)||(46473224-46473313)
chr3 (109-198)||(20380774-20380863)
chr3 (113-196)||(11173551-11173634)
chr3 (126-185)||(24551125-24551184)
chr3 (108-186)||(35272123-35272202)
chr3 (108-185)||(33007456-33007534)
chr3 (108-186)||(49130950-49131028)
chr3 (108-185)||(37215129-37215206)
chr3 (108-195)||(7231894-7231981)
chr3 (108-195)||(41111960-41112047)
chr3 (108-185)||(3483215-3483292)
chr3 (108-185)||(28269902-28269979)
chr3 (108-185)||(37302972-37303049)
chr3 (108-185)||(39604144-39604221)
chr3 (111-186)||(19418057-19418132)
chr3 (111-186)||(29706002-29706077)
chr3 (108-185)||(41877507-41877586)
chr3 (111-186)||(50294021-50294096)
chr3 (108-195)||(51672959-51673046)
chr3 (43-81)||(3483132-3483170)
chr3 (108-174)||(14957932-14957998)
chr3 (108-186)||(25959439-25959517)
chr3 (108-186)||(41957609-41957687)
chr3 (108-185)||(32536837-32536913)
chr3 (108-185)||(37303479-37303556)
chr3 (30-74)||(1207933-1207977)
chr3 (108-156)||(36799494-36799542)
chr3 (108-155)||(5188332-5188379)
chr3 (108-195)||(7293987-7294074)
chr3 (108-186)||(27198050-27198129)
chr3 (108-198)||(32687844-32687935)
chr3 (108-186)||(9027969-9028047)
chr3 (108-154)||(14207471-14207517)
chr3 (108-154)||(14215219-14215265)
chr3 (42-80)||(14957835-14957873)
chr3 (108-186)||(24537315-24537392)
chr3 (43-73)||(29800590-29800620)
chr3 (131-196)||(31997921-31997987)
chr3 (42-80)||(51464306-51464344)
chr3 (43-80)||(1901960-1901997)
chr3 (43-80)||(1911406-1911443)
chr3 (108-153)||(6126550-6126595)
chr3 (43-80)||(7867745-7867782)
chr3 (108-185)||(8066451-8066527)
chr3 (43-80)||(18169157-18169194)
chr3 (42-79)||(20380924-20380961)
chr3 (108-185)||(26279980-26280056)
chr3 (108-186)||(32457650-32457730)
chr3 (43-80)||(38944175-38944212)
chr3 (108-185)||(39540331-39540408)
chr3 (108-185)||(42475875-42475952)
chr3 (33-74)||(45205278-45205319)
chr3 (108-185)||(48649677-48649754)
chr3 (108-157)||(49457661-49457710)
chr3 (108-185)||(55195443-55195519)
chr3 (38-74)||(108426-108462)
chr3 (41-73)||(1295330-1295362)
chr3 (108-188)||(1901821-1901901)
chr3 (108-188)||(1911267-1911347)
chr3 (43-79)||(48945847-48945883)
chr3 (40-80)||(50879592-50879632)
[»] chr1 (53 HSPs)
chr1 (108-198)||(45740429-45740519)
chr1 (108-186)||(34187360-34187438)
chr1 (108-195)||(30631733-30631820)
chr1 (108-186)||(35846216-35846294)
chr1 (108-186)||(40610325-40610403)
chr1 (108-185)||(39010910-39010987)
chr1 (108-185)||(50659090-50659167)
chr1 (108-186)||(25302541-25302620)
chr1 (108-198)||(31427842-31427932)
chr1 (108-185)||(366753-366830)
chr1 (108-185)||(28253111-28253188)
chr1 (108-186)||(10384624-10384703)
chr1 (108-155)||(16836042-16836089)
chr1 (108-186)||(16987543-16987622)
chr1 (109-196)||(22389413-22389499)
chr1 (108-195)||(46948075-46948162)
chr1 (109-186)||(7645451-7645526)
chr1 (108-186)||(20288236-20288314)
chr1 (108-186)||(25061829-25061907)
chr1 (108-186)||(37516008-37516085)
chr1 (108-186)||(50061873-50061951)
chr1 (108-186)||(50527954-50528032)
chr1 (108-185)||(36690470-36690547)
chr1 (108-185)||(36706571-36706648)
chr1 (108-172)||(5477074-5477138)
chr1 (42-73)||(8391368-8391399)
chr1 (137-196)||(8934421-8934480)
chr1 (43-74)||(10384211-10384242)
chr1 (108-186)||(2362466-2362543)
chr1 (41-79)||(5309075-5309113)
chr1 (43-81)||(29293959-29293997)
chr1 (108-186)||(30530471-30530549)
chr1 (108-186)||(31290105-31290183)
chr1 (42-80)||(32821634-32821672)
chr1 (108-186)||(48872475-48872553)
chr1 (43-81)||(49453491-49453529)
chr1 (108-195)||(5304718-5304804)
chr1 (40-81)||(5477185-5477226)
chr1 (43-80)||(6829817-6829854)
chr1 (43-80)||(7503470-7503507)
chr1 (43-80)||(18610773-18610810)
chr1 (43-80)||(37843466-37843503)
chr1 (43-80)||(45740578-45740615)
chr1 (43-80)||(49425738-49425775)
chr1 (108-185)||(50141833-50141910)
chr1 (43-80)||(50226913-50226950)
chr1 (108-183)||(18959099-18959175)
chr1 (109-188)||(31493976-31494056)
chr1 (41-81)||(34187273-34187313)
chr1 (41-81)||(41507216-41507256)
chr1 (108-156)||(43640914-43640962)
chr1 (109-185)||(47015206-47015282)
chr1 (41-69)||(50796000-50796028)
[»] chr8 (44 HSPs)
chr8 (111-196)||(23258131-23258216)
chr8 (108-186)||(38128423-38128501)
chr8 (108-197)||(40413249-40413338)
chr8 (108-195)||(11223747-11223834)
chr8 (108-186)||(28927777-28927855)
chr8 (108-185)||(3989001-3989078)
chr8 (108-185)||(22767226-22767303)
chr8 (108-185)||(24503013-24503090)
chr8 (108-196)||(41344556-41344644)
chr8 (108-186)||(28473442-28473520)
chr8 (108-186)||(36740408-36740486)
chr8 (108-165)||(426197-426254)
chr8 (108-196)||(5502456-5502546)
chr8 (109-184)||(22852738-22852813)
chr8 (108-186)||(37101582-37101661)
chr8 (108-186)||(7678828-7678906)
chr8 (137-186)||(38779144-38779194)
chr8 (108-186)||(40713609-40713686)
chr8 (108-186)||(44672130-44672208)
chr8 (108-173)||(896003-896068)
chr8 (126-186)||(42941584-42941644)
chr8 (42-81)||(1796495-1796534)
chr8 (43-74)||(6004944-6004975)
chr8 (108-183)||(6005040-6005115)
chr8 (108-155)||(37524356-37524403)
chr8 (43-81)||(5502371-5502409)
chr8 (43-81)||(12732842-12732880)
chr8 (108-146)||(24946098-24946136)
chr8 (108-154)||(42996558-42996604)
chr8 (40-81)||(1370307-1370348)
chr8 (109-186)||(5782885-5782962)
chr8 (40-81)||(9047092-9047133)
chr8 (108-173)||(26871140-26871205)
chr8 (43-80)||(28927681-28927718)
chr8 (43-80)||(36497661-36497698)
chr8 (108-185)||(37033000-37033076)
chr8 (108-185)||(40102119-40102196)
chr8 (108-196)||(42012475-42012563)
chr8 (131-172)||(42047454-42047495)
chr8 (43-80)||(45101396-45101433)
chr8 (108-184)||(16011816-16011892)
chr8 (43-79)||(22852874-22852910)
chr8 (120-160)||(26507826-26507866)
chr8 (40-80)||(38844824-38844864)
[»] chr6 (23 HSPs)
chr6 (108-185)||(29383653-29383730)
chr6 (108-195)||(26378273-26378360)
chr6 (108-186)||(2582758-2582836)
chr6 (120-186)||(21857466-21857532)
chr6 (108-196)||(16336957-16337045)
chr6 (108-196)||(34021059-34021147)
chr6 (43-81)||(12441538-12441576)
chr6 (120-186)||(24752339-24752405)
chr6 (108-186)||(32853041-32853119)
chr6 (128-185)||(1196151-1196208)
chr6 (108-185)||(31480734-31480811)
chr6 (108-196)||(1897782-1897870)
chr6 (41-80)||(32457286-32457325)
chr6 (111-185)||(29643318-29643391)
chr6 (120-194)||(31255350-31255424)
chr6 (43-80)||(27334858-27334895)
chr6 (43-80)||(27395598-27395635)
chr6 (40-73)||(33527432-33527465)
chr6 (44-80)||(6435037-6435073)
chr6 (42-99)||(12177576-12177635)
chr6 (108-195)||(22491917-22492004)
chr6 (41-81)||(28549043-28549083)
chr6 (41-81)||(32644621-32644661)
[»] chr2 (48 HSPs)
chr2 (112-185)||(1889247-1889320)
chr2 (108-196)||(3091837-3091925)
chr2 (108-186)||(14714082-14714160)
chr2 (108-185)||(13104575-13104652)
chr2 (108-185)||(32750094-32750171)
chr2 (111-198)||(42251805-42251892)
chr2 (108-186)||(11229218-11229296)
chr2 (108-186)||(43725301-43725379)
chr2 (108-186)||(5067539-5067616)
chr2 (108-186)||(3959992-3960071)
chr2 (108-195)||(42081133-42081220)
chr2 (108-186)||(11164273-11164351)
chr2 (108-186)||(14140236-14140314)
chr2 (108-186)||(22390248-22390326)
chr2 (108-186)||(23344886-23344964)
chr2 (108-186)||(25801708-25801786)
chr2 (108-185)||(34249676-34249754)
chr2 (108-185)||(7086022-7086099)
chr2 (111-196)||(43650434-43650519)
chr2 (108-196)||(31296730-31296818)
chr2 (108-186)||(8555188-8555267)
chr2 (126-185)||(18917738-18917797)
chr2 (41-84)||(21490701-21490744)
chr2 (119-185)||(23045268-23045334)
chr2 (108-186)||(36376748-36376826)
chr2 (108-165)||(4263782-4263839)
chr2 (108-185)||(6639370-6639447)
chr2 (108-185)||(19695590-19695666)
chr2 (108-185)||(23880191-23880268)
chr2 (108-196)||(13711157-13711245)
chr2 (40-80)||(31629601-31629641)
chr2 (120-155)||(7121470-7121505)
chr2 (41-80)||(30856805-30856844)
chr2 (108-186)||(37631263-37631342)
chr2 (43-98)||(14891092-14891149)
chr2 (108-186)||(29795532-29795610)
chr2 (108-186)||(34442209-34442287)
chr2 (126-196)||(36133088-36133158)
chr2 (108-186)||(36435777-36435855)
chr2 (43-80)||(4738606-4738643)
chr2 (43-80)||(5067680-5067717)
chr2 (43-80)||(14140371-14140408)
chr2 (43-80)||(33296105-33296142)
chr2 (43-80)||(36435681-36435718)
chr2 (108-186)||(7428525-7428602)
chr2 (41-73)||(12600046-12600078)
chr2 (126-186)||(12600162-12600222)
chr2 (108-195)||(19913880-19913968)
[»] chr5 (53 HSPs)
chr5 (108-186)||(39595370-39595448)
chr5 (108-186)||(34381108-34381186)
chr5 (108-185)||(19376030-19376107)
chr5 (108-196)||(20719902-20719990)
chr5 (108-196)||(33567126-33567214)
chr5 (114-193)||(29498229-29498308)
chr5 (108-186)||(125188-125266)
chr5 (108-154)||(471910-471956)
chr5 (127-185)||(3728902-3728959)
chr5 (120-186)||(31329023-31329089)
chr5 (108-185)||(27392600-27392677)
chr5 (108-196)||(2117527-2117615)
chr5 (108-188)||(6865682-6865762)
chr5 (108-196)||(19127220-19127308)
chr5 (108-195)||(33909975-33910063)
chr5 (108-198)||(5130262-5130353)
chr5 (126-197)||(11767876-11767947)
chr5 (126-186)||(15531786-15531848)
chr5 (108-183)||(29402278-29402353)
chr5 (108-186)||(12718277-12718355)
chr5 (108-186)||(24431515-24431593)
chr5 (108-186)||(36624414-36624492)
chr5 (43-80)||(125092-125129)
chr5 (108-153)||(11666275-11666320)
chr5 (108-153)||(14323898-14323943)
chr5 (39-79)||(19127120-19127160)
chr5 (108-172)||(28811524-28811588)
chr5 (108-196)||(33243628-33243716)
chr5 (40-80)||(39595269-39595309)
chr5 (108-195)||(40566104-40566192)
chr5 (108-195)||(11306792-11306879)
chr5 (108-186)||(13613860-13613939)
chr5 (108-186)||(91311-91389)
chr5 (43-81)||(6865809-6865847)
chr5 (108-186)||(12779503-12779581)
chr5 (47-81)||(29227721-29227755)
chr5 (108-186)||(31284291-31284369)
chr5 (42-80)||(34381011-34381049)
chr5 (108-186)||(34767314-34767392)
chr5 (108-154)||(42909815-42909861)
chr5 (126-186)||(7927465-7927526)
chr5 (108-181)||(13734262-13734335)
chr5 (43-80)||(28811429-28811466)
chr5 (108-165)||(39458737-39458794)
chr5 (43-79)||(1774318-1774354)
chr5 (108-156)||(3960096-3960144)
chr5 (40-80)||(4098620-4098660)
chr5 (108-156)||(14070526-14070574)
chr5 (41-73)||(14070656-14070688)
chr5 (41-81)||(16143388-16143428)
chr5 (43-79)||(23991169-23991205)
chr5 (43-79)||(36713213-36713249)
chr5 (138-186)||(43482491-43482539)
[»] chr7 (40 HSPs)
chr7 (108-186)||(25887679-25887757)
chr7 (109-186)||(10591250-10591326)
chr7 (108-185)||(19510255-19510332)
chr7 (108-197)||(37351876-37351965)
chr7 (108-196)||(46651768-46651856)
chr7 (111-186)||(21858846-21858921)
chr7 (108-195)||(41966424-41966511)
chr7 (113-186)||(2790278-2790352)
chr7 (108-186)||(44894371-44894449)
chr7 (108-186)||(47193023-47193101)
chr7 (108-197)||(155867-155956)
chr7 (108-169)||(43213404-43213465)
chr7 (108-153)||(45607120-45607165)
chr7 (121-196)||(43445516-43445591)
chr7 (108-186)||(45432040-45432118)
chr7 (108-186)||(5978675-5978753)
chr7 (108-182)||(12102610-12102684)
chr7 (111-186)||(5198656-5198732)
chr7 (114-186)||(12141986-12142058)
chr7 (37-81)||(22330653-22330697)
chr7 (111-195)||(38995911-38995995)
chr7 (108-196)||(48866817-48866905)
chr7 (108-186)||(2414159-2414235)
chr7 (43-74)||(27778079-27778110)
chr7 (108-195)||(30180603-30180690)
chr7 (41-80)||(41077534-41077573)
chr7 (43-81)||(2469703-2469741)
chr7 (108-186)||(5378723-5378801)
chr7 (108-186)||(7077650-7077728)
chr7 (128-186)||(26153776-26153834)
chr7 (43-81)||(37352012-37352050)
chr7 (108-162)||(39875730-39875784)
chr7 (111-196)||(24700220-24700305)
chr7 (39-80)||(26153642-26153683)
chr7 (41-99)||(27688646-27688706)
chr7 (108-185)||(28824599-28824676)
chr7 (108-185)||(33684776-33684853)
chr7 (40-80)||(1814341-1814381)
chr7 (42-74)||(31982056-31982088)
chr7 (43-79)||(45607024-45607060)
[»] scaffold0011 (2 HSPs)
scaffold0011 (108-167)||(219580-219639)
scaffold0011 (43-80)||(219698-219735)
[»] scaffold0501 (1 HSPs)
scaffold0501 (108-185)||(10414-10491)
[»] scaffold0036 (1 HSPs)
scaffold0036 (108-197)||(18100-18188)
[»] scaffold0002 (2 HSPs)
scaffold0002 (108-186)||(6523-6601)
scaffold0002 (40-80)||(440715-440755)
[»] scaffold0154 (2 HSPs)
scaffold0154 (108-185)||(9746-9823)
scaffold0154 (43-80)||(19725-19762)
[»] scaffold0508 (2 HSPs)
scaffold0508 (108-196)||(11423-11511)
scaffold0508 (42-79)||(11571-11608)
[»] scaffold0076 (1 HSPs)
scaffold0076 (108-172)||(11288-11352)
[»] scaffold0026 (1 HSPs)
scaffold0026 (41-80)||(113623-113662)
[»] scaffold0018 (2 HSPs)
scaffold0018 (43-73)||(36002-36032)
scaffold0018 (108-196)||(36095-36186)
[»] scaffold0009 (1 HSPs)
scaffold0009 (108-186)||(190782-190860)
[»] scaffold0662 (1 HSPs)
scaffold0662 (43-80)||(1078-1115)
[»] scaffold0054 (1 HSPs)
scaffold0054 (108-165)||(31518-31575)
[»] scaffold0131 (1 HSPs)
scaffold0131 (44-80)||(15568-15604)


Alignment Details
Target: chr4 (Bit Score: 254; Significance: 1e-141; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 29 - 377
Target Start/End: Original strand, 37547051 - 37547400
Alignment:
Q  29 gtctattaagatatgagaaatgatatttgtacaactactttgtgacgactttcattcatattcacattatannnnnnnn-ctctccattgtatttgatca 127  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||  | ||| | ||||||||         ||||||||||||||||| ||    
T  37547051 gtctattaagatatgagaaatgatatttgtacaaccactttgtgacaactttctcttatacttacattatatttttttctctctccattgtatttgacca 37547150  T
Q  128 atgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactcttatgatattccatacaaattacaaacatacaa 227  Q
    ||||||| |||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37547151 atgaaaaatgagaaaaaagaagttatcacataaattgtctcagataattgttcaaatattactactcttatgatattccatacaaattacaaacatacaa 37547250  T
Q  228 ggagatataaggtctcccaatctaagtcgcatcctacttgaaacacattacattttatttgttaaaactgtagagacaatatgataaatcacttagtaac 327  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37547251 ggagatataaggtctcccaatttaagtcgcatcctacttgaaacacattacattttatttgttaaaactgtagagacaatatgataaatcacttagtaac 37547350  T
Q  328 aagctatgagtctaaagtttttaagtgacgcaacatttggtaccttagga 377  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37547351 aagctatgagtctaaagtttttaagagacgcaacatttggtaccttagga 37547400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 51717259 - 51717171
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||  ||||| |||||||||| |||||||||||| |||||| |||| |||||||| |||||||||||||||| | |||||||    
T  51717259 ctctccattgattttgaccaatgaaaagagagaaaaaagaaattgtcacataagttgtctcatatgattgttcaaatatcactactctt 51717171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 34116515 - 34116436
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatat 186  Q
    ||||||||||| ||||||| |||||||| ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||    
T  34116515 ctctccattgtttttgatcgatgaaaagagagaaaaaaaaagttgtcacataaattgtctaaaatgagttgttcaaatat 34116436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 31658015 - 31658093
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||| | ||  ||| ||||||| ||||||||||||    
T  31658015 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagctgtatcaaatggttgttcaaatat 31658093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 31275242 - 31275329
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| |||||||||| |||||||||||| |||||| | || |||| ||||||| |||||||||||| | ||||||    
T  31275242 ctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactct 31275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 9162162 - 9162226
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaat 172  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||| ||||||    
T  9162162 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtatcaaat 9162226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 197
Target Start/End: Complemental strand, 36444369 - 36444281
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    |||||||||| ||||| |||||||||  ||||||| ||||||||||| |  |||||| ||| |||||||||||||||| | ||||||||    
T  36444369 tctccattgtttttgaccaatgaaaaaagagaaaatagaagttgtcacaagaattgtatcatatgattgttcaaatatcactactctta 36444281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 55927080 - 55927168
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||| |||||| ||||| |||||||||| |||| ||||||| |||||| | |||||||||||||||  ||||||||||| | |||||||    
T  55927080 ctcttcattgtttttgaccaatgaaaagagagagaaaagaaattgtcacaaaaattgtctcaaatggatgttcaaatatcactactctt 55927168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 10994127 - 10994041
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||| | |||| ||||| |||| |||||||||||||  ||||||||||| |||||||||||||||||| | ||||||    
T  10994127 ctctccattgtttttaaccaat-aaaagagagagaaaagaagttgtcgcataaattgtctaaaatgattgttcaaatatcactactct 10994041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 34974549 - 34974596
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca 155  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  34974549 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtca 34974596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 4896475 - 4896385
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    ||||||||||| ||||| |||||||||| ||||||||||| ||||||| | || |||| ||||||   ||||||||||| | |||||||||    
T  4896475 ctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactcttat 4896385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 15596492 - 15596570
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| || || ||||||||| |||||||||||||||||||| | || |||| | ||||| ||||||||||||    
T  15596492 ctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatat 15596570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 51389412 - 51389490
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| |  ||||||||| ||||||||||||||||||| | || |||| ||||||| ||||||||||||    
T  51389412 ctctccattgttttttactaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatat 51389490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 5123565 - 5123488
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||| ||||||| |||| ||||| ||||||||| ||||||||| | || |||||||| ||| |||||||||||    
T  5123565 ctctccattatatttgaccaattaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 5123488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 24337331 - 24337254
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||| | ||||| |||||||||| ||||||||||||| ||||| ||||||| |||||  || |||||||||||    
T  24337331 ctctccattttttttgaccaatgaaaagagagaaaaaagaagctgtcacataaattatctcatttggttgttcaaata 24337254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 35580206 - 35580283
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||| | ||||| |||||||||| ||| ||||| ||||||||| |||| ||||||||  ||||||||||||||    
T  35580206 ctctccattatttttgaccaatgaaaagagaggaaaaaaaagttgtcacataagttgtctcatttgattgttcaaata 35580283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 1031851 - 1031895
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttg 152  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||    
T  1031851 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttg 1031895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 47998690 - 47998777
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||||| ||||||||||  |||||||| ||||| ||| | || |||| |||||||||||||||||||| | |||||||    
T  47998690 ctctccattgtttttgaccaatgaaaagaaagaaaaaa-aagttatcacaaaagttgtatcaaatgattgttcaaatatcactactctt 47998777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 38160748 - 38160669
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatat 186  Q
    ||||||||||| |||||  ||||||||  ||||||||| ||||||||| |||| |||||| |||||| ||||||||||||    
T  38160748 ctctccattgtttttgactaatgaaaaaagagaaaaaataagttgtcacataagttgtctaaaatgagttgttcaaatat 38160669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 51039189 - 51039150
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  51039189 atgagaaatgatatttgtacaactactttgtgacaacttt 51039150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 52891829 - 52891736
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgaga---aaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    ||||||||||| ||||| |||||||||| ||||   ||||| ||||||||| |||| || |||||  |||||||||||||| || |||||||||    
T  52891829 ctctccattgtttttgaccaatgaaaagagagagaaaaaaaaaagttgtcacataagttatctcatttgattgttcaaataatattactcttat 52891736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 5234446 - 5234368
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||| ||||| ||||||||| || |||||| | || |||| ||||||| ||||||||||||    
T  5234446 ctctccattgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatat 5234368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 29384172 - 29384094
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||  ||||||| ||||||||||| |  | |||| ||| ||||||||||||||||    
T  29384172 ctctccattgtttttgaccaatgaaaaaagagaaaatagaagttgtcacaagagttgtatcatatgattgttcaaatat 29384094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 38952785 - 38952863
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||  |||||||||||| || ||| | ||||||| |||||| |||||| ||||||    
T  38952785 ctctccattgtttttgaccaatgaaaaaagagaaaaaagaaattatcacaaaaattgtatcaaataattgtttaaatat 38952863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 42915176 - 42915106
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||||||||| ||||||||||||||||||| | || |||| ||||||  |||||||||||| | |||||||    
T  42915176 caatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctt 42915106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 38844465 - 38844388
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||| ||||| ||||| |||||||||| |||| |||| ||||||||| | || |||||||| ||| |||||||||||    
T  38844465 ctctctattgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 38844388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 40409141 - 40409096
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgt 153  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||    
T  40409141 ctctccattatttttgatcaataaaaagtgagaaaaaagaagttgt 40409096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 46173633 - 46173721
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||| | |||||||||| || ||||||||| |||||| | || |||| ||||||| || ||||||||| | |||||||    
T  46173633 ctctccattgttttttaccaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatggttattcaaatatcattactctt 46173721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 48372183 - 48372111
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    |||||||||| ||||||||||||||||||| || ||||||| | ||||  |||||||||||| | ||||||||    
T  48372183 caatgaaaagagagaaaaaagaagttgtcactaaaaattgtatgaaatagttgttcaaatatcactactctta 48372111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 18499995 - 18500054
Alignment:
Q  120 tttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgtt 179  Q
    |||||||||| ||||| |||| |||||||||||||| | ||||| |||||||| ||||||    
T  18499995 tttgatcaataaaaagagagagaaaagaagttgtcaaaaaaattatctcaaataattgtt 18500054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 18874899 - 18874820
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattg-tctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||| ||| |||||||| || ||||||||| || ||| |  |||||||||||||||||||    
T  18874899 ctctccattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatgattgttcaaatat 18874820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 30778239 - 30778152
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||| | |||| ||||| |||||||||||| |||||||| || || | ||||||  |||||||||||| | ||||||    
T  30778239 ctctccattgtttttaaccaataaaaagagagaaaaaagaaattgtcataaaagttatatcaaatagttgttcaaatatcattactct 30778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 41952924 - 41952971
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca 155  Q
    ||||||||||| ||| |||||||||||| ||||||||| |||||||||    
T  41952924 ctctccattgtttttaatcaatgaaaagagagaaaaaaaaagttgtca 41952971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 6370978 - 6371016
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  6370978 atgagaaatgatatttgtacaaccactttgtgacaactt 6371016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 11997684 - 11997722
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  11997684 tgagaaatgatatttgtacaaccactttgtgacaacttt 11997722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 23690327 - 23690405
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||| | ||||| |||||||||| |||||||||||  |||||| | ||||||| ||||||   |||||||||||    
T  23690327 ctctccattatttttgaccaatgaaaagagagaaaaaagatattgtcacaaaaattgtttcaaatagatgttcaaatat 23690405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 25523171 - 25523081
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    ||||| ||||| ||||| |||||||||| |||| |||| ||||| ||| | || |||||||| ||| |||||||||||  | |||||||||    
T  25523171 ctctctattgtttttgaccaatgaaaagagagagaaaataagttatcacaaaagttgtctcatatggttgttcaaataacactactcttat 25523081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 26885290 - 26885328
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  26885290 tgagaaatgatatttgtacaaccactttgtgacaacttt 26885328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 28480513 - 28480435
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||| ||| ||| | |||||||||| |||| |||||||||||||| |  | |||||||||||  ||||||||||||    
T  28480513 ctctccaatgtgtttaaccaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatat 28480435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 28481387 - 28481309
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||| ||| ||| | |||||||||| |||| |||||||||||||| |  | |||||||||||  ||||||||||||    
T  28481387 ctctccaatgtgtttaaccaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatat 28481309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 28482262 - 28482184
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||| ||| ||| | |||||||||| |||| |||||||||||||| |  | |||||||||||  ||||||||||||    
T  28482262 ctctccaatgtgtttaaccaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatat 28482184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 31240744 - 31240834
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    |||| |||||| ||| | |||||||||| |||||||||||||||||||  | || |||| | ||||| |||||||||||| | ||||||||    
T  31240744 ctcttcattgtttttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactctta 31240834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 33093175 - 33093137
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||||| |||||||| ||||||    
T  33093175 gagaaatgatatttgtacaactattttgtgacaactttc 33093137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 36512938 - 36513016
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||| ||||| |||| |||||||||||||| |  ||||||||||||||  | |||||||||    
T  36512938 ctctccattgttttttaccaataaaaagagagagaaaagaagttgtcacaagaattgtctcaaatggattttcaaatat 36513016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 39844233 - 39844155
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||| | | || ||||||||| |   |||||||||||    
T  39844233 ctctccattgtttttgaccaataaaaagagagaaaaaagaagttgttaaaaaagttgtctcaattagatgttcaaatat 39844155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 41119541 - 41119503
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  41119541 gagaaatgatatttgtacaaccactttgtgacaactttc 41119503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 46173550 - 46173588
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  46173550 gagaaatgatatttgtacaaccactttgtgacaactttc 46173588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 48493884 - 48493826
Alignment:
Q  131 aaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaa 189  Q
    |||||||||||||||||| || ||||| || || |||||||| ||| ||||||||||||    
T  48493884 aaaagtgagaaaaaagaaattatcataaaagttatctcaaataattcttcaaatattaa 48493826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 4896571 - 4896534
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  4896571 gagaaatgatatttgtacaaccactttgtgacaacttt 4896534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 6594713 - 6594668
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgt 153  Q
    ||||||||||| ||||| ||||||||| | ||||||||||||||||    
T  6594713 ctctccattgtttttgaccaatgaaaaataagaaaaaagaagttgt 6594668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 11064160 - 11064123
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaacttt 11064123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 15596395 - 15596432
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgactt 79  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  15596395 tgagaaatgatatttgtacaaccactttgtgacaactt 15596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 22257267 - 22257230
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  22257267 gagaaatgatatttgaacaactactttgtgacaacttt 22257230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 34116611 - 34116574
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  34116611 gagaaatgatatttgtacaaccactttgtgacaacttt 34116574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 35017153 - 35017190
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  35017153 gagaaatgatatttgtacaactattttgtgacaacttt 35017190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 47014939 - 47014976
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  47014939 gagaaatgatatttgtacaactattttgtgacaacttt 47014976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 49194979 - 49195036
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgt 165  Q
    ||||||||||| ||||| |||| ||||| |||| |||||||||||||| |||| ||||    
T  49194979 ctctccattgtttttgaccaataaaaagagagagaaaagaagttgtcacataagttgt 49195036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 71
Target Start/End: Original strand, 12638825 - 12638853
Alignment:
Q  43 gagaaatgatatttgtacaactactttgt 71  Q
    |||||||||||||||||||||||||||||    
T  12638825 gagaaatgatatttgtacaactactttgt 12638853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 23347772 - 23347812
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||| | |||||||||| |||||    
T  23347772 tatgagaaatgatatttgtacatccactttgtgacaacttt 23347812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 31048984 - 31049032
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcat 156  Q
    ||||||||||| |||||||||| ||||| ||||||||  ||||||||||    
T  31048984 ctctccattgtttttgatcaatcaaaagagagaaaaacaaagttgtcat 31049032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 31240646 - 31240678
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtga 73  Q
    ||||||||||||||||||||||| |||||||||    
T  31240646 atgagaaatgatatttgtacaaccactttgtga 31240678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 32365729 - 32365689
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  32365729 atgagaaatgatatttgtacaaccattttgtgacaactttc 32365689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 41262699 - 41262651
Alignment:
Q  33 attaagatatgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||| ||| |||||||||||||||||||| || |||||||| ||||||    
T  41262699 attaaaataagagaaatgatatttgtacaattattttgtgacaactttc 41262651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 52392299 - 52392259
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||| | |||||||||| |||||    
T  52392299 tatgagaaatgatatttgtacatccactttgtgacaacttt 52392259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 6e-25; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 48945943 - 48946021
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  48945943 ctctccattgtttttgaccaatgaaaattgagaaaaaagaagttatcatataaattgtttcaaatgattgttcaaatat 48946021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 46473224 - 46473313
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||| || |||| ||||||| |||||||||||| | ||||||||    
T  46473224 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactctta 46473313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 20380863 - 20380774
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||| | || |||| | ||||| |||||||||||| | |||||||||    
T  20380863 tctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactcttat 20380774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 11173551 - 11173634
Alignment:
Q  113 cattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||||| ||||| |||||||||| ||||||||||||||||||| | || |||| ||||||| |||||||||||||| |||||||    
T  11173551 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatattattactctt 11173634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 24551184 - 24551125
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    |||||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  24551184 caatgaaaagagagaaaaaagaagttgtcacataaattgtctcatttgattgttcaaata 24551125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 35272123 - 35272202
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatg-attgttcaaatat 186  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||||| |||| |||||| ||||| |||||||||||||    
T  35272123 ctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtcacataagttgtctaaaatgaattgttcaaatat 35272202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 33007456 - 33007534
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaa-aagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||| |||||||||||| | ||||||||||| ||| |||||||||||    
T  33007456 ctctccattgtttttgaccaatgaaaagagagaaaaaaagaagttgtcacaaaaattgtctcatatggttgttcaaata 33007534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 49130950 - 49131028
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| |||||  ||||||||| |||| |||||||||||||| | |||||||||||||||  |||||||||||    
T  49130950 ctctccattgtttttgactaatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatat 49131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 37215206 - 37215129
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||||| ||||||||| | || |||||||| ||| |||||||||||    
T  37215206 ctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 37215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 7231981 - 7231894
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| |||||||||| ||||||||| || |||||| | || |||| ||||||| |||||||||||| | ||||||    
T  7231981 ctctccattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactct 7231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 41112047 - 41111960
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||||| | | || ||||||||||||  ||||||||||| | ||||||    
T  41112047 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 41111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 3483215 - 3483292
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||| | ||| |||||||||||| ||||||||| ||||||||| | |  |||| |||||||||||||||||||    
T  3483215 ctctccattattttttatcaatgaaaagagagaaaaaaaaagttgtcacagatgttgtatcaaatgattgttcaaata 3483292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 28269902 - 28269979
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| ||||||||||  |||||||||||||||||  | || |||||||| ||| |||||||||||    
T  28269902 ctctccattgtttttgaccaatgaaaagatagaaaaaagaagttgtcgcaaaagttgtctcatatggttgttcaaata 28269979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 37303049 - 37302972
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||| | |||||||||| |||||||||||| |||||| | || |||||||| ||| |||||||||||    
T  37303049 ctctccattgttttttaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtctcatatgcttgttcaaata 37302972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 39604221 - 39604144
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| |||| || |||||  |  |||||||||||    
T  39604221 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaaataagttatctcatttagttgttcaaata 39604144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 19418132 - 19418057
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||| ||||| |||||||||| |||| |||||||||||||| |  | ||||||||||||  |||||||||||    
T  19418132 tccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatat 19418057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 29706002 - 29706077
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||| ||| | |||||||||| ||||||||||||||||||| | || |||| ||||||  ||||||||||||    
T  29706002 tccattgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatat 29706077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 41877586 - 41877507
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgaga-aaaaagaagttgtcatataaattgtctcaaatg-attgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| |||| |||||||| |||||| |||| |||||| ||||| ||||||||||||    
T  41877586 ctctccattgtttttgaccaatgaaaagagagagaaaaagaaattgtcacataagttgtctaaaatgaattgttcaaata 41877507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 50294096 - 50294021
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||| |||||||||||||||| ||||||||  ||||||||| |||| ||||  |||||| ||||| ||||||    
T  50294096 tccattgtttttgatcaatgaaaagagagaaaaagaaagttgtcaaataagttgtaccaaatggttgttaaaatat 50294021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 51672959 - 51673046
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| ||||||||| ||| ||||||||||||||   | || |||||| ||||| |||||||||||| | ||||||    
T  51672959 ctctccattgtttttgaccaatgaaaactgaaaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactct 51673046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 3483132 - 3483170
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  3483132 gagaaatgatatttgtacaaccactttgtgacgactttc 3483170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 14957932 - 14957998
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga 174  Q
    ||||||||| | ||||| |||||||||| | ||||||||| ||||||| ||||||||||| ||||||    
T  14957932 ctctccattatttttgaccaatgaaaagggcgaaaaaagaggttgtcacataaattgtctaaaatga 14957998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 25959517 - 25959439
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||||||   ||||||||| |||  |||| ||||||| ||||||||||||    
T  25959517 ctctccattgtttttgaccaatgaaaagagagaaaatgaaagttgtcaaataggttgtatcaaatggttgttcaaatat 25959439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 41957609 - 41957687
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||||||||||||||| || ||| | || |||| | ||||| ||||| ||||||    
T  41957609 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaaattatcacaaaagttgtttaaaatggttgtttaaatat 41957687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 32536837 - 32536913
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| |||||||||||||||| |||| |||| ||||||||| |||| |||| |||  | ||||||||||||    
T  32536837 ctctccattgtttttgatcaatgaaaagagagagaaaa-aagttgtcacataagttgtatcatttaattgttcaaata 32536913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 37303479 - 37303556
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||| ||||| |||||||||||||||| ||||||||| || |||||| | || |||||||| ||  |||||||||||    
T  37303479 ctctctattgtttttgatcaatgaaaagagagaaaaaataaattgtcacaaaagttgtctcatatagttgttcaaata 37303556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 1207933 - 1207977
Alignment:
Q  30 tctattaagatatgagaaatgatatttgtacaactactttgtgac 74  Q
    |||||| ||||||||||||||||||||||||||||| | ||||||    
T  1207933 tctatttagatatgagaaatgatatttgtacaactattatgtgac 1207977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 36799494 - 36799542
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcat 156  Q
    ||||||||||| ||||| |||||||||| |||||||| |||||||||||    
T  36799494 ctctccattgtttttgaccaatgaaaagagagaaaaatgaagttgtcat 36799542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 5188332 - 5188379
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca 155  Q
    ||||||||||| ||| | |||||||||| |||||||||||||||||||    
T  5188332 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtca 5188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 7294074 - 7293987
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||| ||| ||||| ||||||||| | ||||||||||||||||   | || |||||| ||||| |||||||||||| | ||||||    
T  7294074 ctctccactgtttttgaccaatgaaaaataagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactct 7293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 27198129 - 27198050
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattg-tctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| |||||||| || ||||||||| || ||| |  |||||||||||||||||||    
T  27198129 ctctccattgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgttagcaaatgattgttcaaatat 27198050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 32687935 - 32687844
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    ||||||||||| ||| | |||||||||| ||||||||||||||| |||  | || |||| ||||||  |||||||||||| | |||||||||    
T  32687935 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttatcaccaaaagttgtatcaaatagttgttcaaatatcattactcttat 32687844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 9027969 - 9028047
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||| ||||  |||| ||| |||||||||| | |||| || ||||||| ||||||||||||    
T  9027969 ctctccattgtttttgaccaataaaaatagagagaaacgaagttgtcacaaaaatcgtatcaaatggttgttcaaatat 9028047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 14207471 - 14207517
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtc 154  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||||    
T  14207471 ctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtc 14207517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 14215219 - 14215265
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtc 154  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||||    
T  14215219 ctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtc 14215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 14957835 - 14957873
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  14957835 tgagaaatgatatttgtacaaccactttgtgacaacttt 14957873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 24537315 - 24537392
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||| |||||| ||| | ||||||||||  ||||||||||||||||||  |||||||| | ||||| ||||||||||||    
T  24537315 ctctgcattgtttttaaccaatgaaaagaaagaaaaaagaagttgtca-ctaaattgtataaaatggttgttcaaatat 24537392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 73
Target Start/End: Complemental strand, 29800620 - 29800590
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtga 73  Q
    |||||||||||||||||||||||||||||||    
T  29800620 gagaaatgatatttgtacaactactttgtga 29800590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 31997921 - 31997987
Alignment:
Q  131 aaaagtgagaaaaaagaagttgtcatataaa-ttgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||| |||| |||||||||||||||  ||| |||||||||||| |||||||||||| | |||||||    
T  31997921 aaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactctt 31997987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Complemental strand, 51464344 - 51464306
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  51464344 tgagaaatgatatttgtacaaccactttgtgacaacttt 51464306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 1901997 - 1901960
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  1901997 gagaaatgatatttgtacaaccactttgtgacaacttt 1901960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 1911443 - 1911406
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  1911443 gagaaatgatatttgtacaaccactttgtgacaacttt 1911406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 6126550 - 6126595
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgt 153  Q
    ||||||||||| ||| | |||||||||| |||||||||||||||||    
T  6126550 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgt 6126595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 7867782 - 7867745
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  7867782 gagaaatgatatttgtacaactattttgtgacaacttt 7867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 8066451 - 8066527
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||| ||||| ||||||||| |  | |||||||| ||||||||| |||||    
T  8066451 ctctccattgtttttgaccaatgaaaagagag-aaaaataagttgtcacaatagttgtctcatatgattgtttaaata 8066527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 18169157 - 18169194
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  18169157 gagaaatgatatttgtacaaccactttgtgacaacttt 18169194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 20380961 - 20380924
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgactt 79  Q
    |||||||||||||||||||||| |||||||||| ||||    
T  20380961 tgagaaatgatatttgtacaaccactttgtgacaactt 20380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 26279980 - 26280056
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||| ||||| || |||||| |||| || |||||  ||||||||||||||    
T  26279980 ctctccattgtttttgaccaatgaaaagagaggaaaaa-aaattgtcacataagttatctcatttgattgttcaaata 26280056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 32457730 - 32457650
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtc--atataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||| | ||| | |||||||||| ||||||||||||||||||  | | ||||||| ||||||  ||||||||||||    
T  32457730 ctctccattatttttaaccaatgaaaagagagaaaaaagaagttgtcaaaaaaaaattgtatcaaatagttgttcaaatat 32457650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 38944212 - 38944175
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  38944212 gagaaatgatatttgtacaactaatttgtgacaacttt 38944175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 39540331 - 39540408
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||| | ||||| |||||||||| ||||||||| || || ||| | ||||| ||||| ||| |||||||||||    
T  39540331 ctctccattttttttgaccaatgaaaagagagaaaaaataaattatcacaaaaattatctcatatggttgttcaaata 39540408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 42475952 - 42475875
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||  ||||| |||||||||| ||||||||| ||||| ||| | || |||||| | ||| |||||||||||    
T  42475952 ctctccattggttttgaccaatgaaaagagagaaaaaataagttttcacaaaagttgtcttatatggttgttcaaata 42475875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 45205278 - 45205319
Alignment:
Q  33 attaagatatgagaaatgatatttgtacaactactttgtgac 74  Q
    |||| ||| |||||||||||||||||||||||| ||||||||    
T  45205278 attaggatttgagaaatgatatttgtacaactattttgtgac 45205319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 48649677 - 48649754
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||  |||| |||| ||||| ||| | ||||| ||||| ||| |||||||||||    
T  48649677 ctctccattgtttttgaccaatgaaaaaagagagaaaataagttatcacaaaaattatctcatatggttgttcaaata 48649754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 49457661 - 49457710
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcata 157  Q
    ||||||||||| ||||| |||||||||| |||||||| || |||||||||    
T  49457661 ctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgtcata 49457710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 55195443 - 55195519
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||| | | |||||||| ||| ||||| || |||||| |||||||||||||  ||||||||||||||    
T  55195443 ctctccattgtttttaaccgatgaaaagagaggaaaaaaaa-ttgtcacataaattgtctcatttgattgttcaaata 55195519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 108426 - 108462
Alignment:
Q  38 gatatgagaaatgatatttgtacaactactttgtgac 74  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  108426 gataagagaaatgatatttgtacaaccactttgtgac 108462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 1295330 - 1295362
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtga 73  Q
    ||||||||||||||||||||||||| |||||||    
T  1295330 atgagaaatgatatttgtacaactattttgtga 1295362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 1901901 - 1901821
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatatta 188  Q
    ||||||||||| ||||| |||||||||| |||||||   | ||||||| |||  ||||  |||||| ||||||||||||||    
T  1901901 ctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatatta 1901821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 1911347 - 1911267
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatatta 188  Q
    ||||||||||| ||||| |||||||||| |||||||   | ||||||| |||  ||||  |||||| ||||||||||||||    
T  1911347 ctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatatta 1911267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 48945847 - 48945883
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  48945847 gagaaatgatatttgtacaaccactttgtgacaactt 48945883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 50879592 - 50879632
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||||||  ||||||| |||||    
T  50879592 tatgagaaatgatatttgtacaactaaattgtgacaacttt 50879632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 45740519 - 45740429
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||| | |||||||||||||||||||| | |||||||||    
T  45740519 ctctccattgtttttgaccaatgaaaattgagaaaaaagaagttgtcataaaaattatttcaaatgattgttcaaatatcactactcttat 45740429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 34187360 - 34187438
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||  ||||| |||||||||| ||||||| ||||||||||| ||||||||||||| ||| ||||||||||||    
T  34187360 ctctccattgattttgaccaatgaaaagagagaaaagagaagttgtcacataaattgtctcacatggttgttcaaatat 34187438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 30631820 - 30631733
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||   | || |||||| ||||| |||||||||||| | ||||||    
T  30631820 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactct 30631733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 35846294 - 35846216
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||   | || |||||| ||||| ||||||||||||    
T  35846294 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatat 35846216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 40610325 - 40610403
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||||||| | || ||||||||||||  |||||||||||    
T  40610325 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatat 40610403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 39010910 - 39010987
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||||| ||||||||| | || |||||||| ||| |||||||||||    
T  39010910 ctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 39010987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 50659167 - 50659090
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||||||| |||| |||| ||| ||| |||||||||||    
T  50659167 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacataagttgtttcatatggttgttcaaata 50659090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 25302620 - 25302541
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatat 186  Q
    ||||| ||||| ||| | |||||||||| ||||||||| ||||||||| ||||||||||| |||||| ||||||||||||    
T  25302620 ctctctattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacataaattgtctaaaatgagttgttcaaatat 25302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 31427932 - 31427842
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    ||||||||| | ||||| ||||||||| ||| ||||||||| |||||||| || |||| | |||| ||||||||||||| | |||||||||    
T  31427932 ctctccattatttttgaccaatgaaaaatgaaaaaaaagaaattgtcataaaagttgtttaaaataattgttcaaatatcactactcttat 31427842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 366753 - 366830
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||| ||||| ||||||||| |||| ||||||||  || |||||||||||    
T  366753 ctctccattgtttttgaccaatgaaaagagaggaaaaaaaagttgtcacataagttgtctcatttggttgttcaaata 366830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 28253111 - 28253188
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||||| | | || |||||||| ||| |||||||||||    
T  28253111 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgttacaaaagttgtctcatatggttgttcaaata 28253188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 10384624 - 10384703
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| | || |||||||||||||| ||||||| ||| |||||| ||||| ||||||    
T  10384624 ctctccattgtttttgaccaatgaaaagagtgagaaaagaagttgtcacataaattatctaaaatgagttgtttaaatat 10384703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 16836089 - 16836042
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca 155  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  16836089 ctctccattgtttttgaccaatgaaaagtaagaaaaaagaagttgtca 16836042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 16987543 - 16987622
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattg-tctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||||||| || ||||||||| |||||| |  |||||| ||||||||||||    
T  16987543 ctctccattgtttttgaccaatgaaaagagagaaaaaggaggttgtcatagaaattgttagcaaatggttgttcaaatat 16987622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 22389499 - 22389413
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||||||| | ||||| |||||||||| ||||||||||||||||||| | || |||  ||||||| |||||||||||| | |||||||    
T  22389499 tctccattatttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg-atcaaatggttgttcaaatatcattactctt 22389413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 46948075 - 46948162
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| ||||||||||  ||| |||||||||||||| |  | ||||||||||||  ||||||||||| | ||||||    
T  46948075 ctctccattgtttttgaccaatgaaaagatagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcactactct 46948162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 7645526 - 7645451
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||||| ||||| |||||||||| |||||||  |||||||| | | |||||||||||||||  |||||||||||    
T  7645526 tctccattgtttttgaccaatgaaaagagagaaaa--gaagttgttaaaaaaattgtctcaaatggatgttcaaatat 7645451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 20288314 - 20288236
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||   | || |||||| ||||| ||||||| ||||    
T  20288314 ctctccattatttttgatcaataaaaagtgagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcatatat 20288236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 25061829 - 25061907
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| ||||||||  | ||||||| ||| ||||| ||||||| ||||||||||||    
T  25061829 ctctccattgtttttaaccaatgaaaagagagaaaaagaaggttgtcaaatagattgtatcaaatggttgttcaaatat 25061907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 37516008 - 37516085
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||| ||||| | |||||||||| ||||||||| ||||||||| |  ||||||||||| || ||||||||||||    
T  37516008 ctctccattatatttaaccaatgaaaagagagaaaaaa-aagttgtcacagtaattgtctcaagtggttgttcaaatat 37516085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 50061951 - 50061873
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||| |||||| |||||||||| ||||| |||| |||||||||||| |||  |||||| |||||| | |||||||||||    
T  50061951 ctcttcattgtttttgatcaataaaaagagagagaaaagaagttgttataagaattgtttcaaataaatgttcaaatat 50061873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 50528032 - 50527954
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| ||||||||  | ||||||| ||| |||||  |||||| ||||||||||||    
T  50528032 ctctccattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaatagattgtagcaaatggttgttcaaatat 50527954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 36690547 - 36690470
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||  |||| |||| ||||||||| | || |||||||| ||| |||||||||||    
T  36690547 ctctccattgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 36690470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 36706648 - 36706571
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||  |||| |||| ||||||||| | || |||||||| ||| |||||||||||    
T  36706648 ctctccattgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 36706571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 5477138 - 5477074
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaat 172  Q
    ||||||||||| ||||| |||| ||||| ||||||||||||||||||| | || |||| ||||||    
T  5477138 ctctccattgtttttgaccaataaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaat 5477074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 73
Target Start/End: Complemental strand, 8391399 - 8391368
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtga 73  Q
    ||||||||||||||||||||||||||||||||    
T  8391399 tgagaaatgatatttgtacaactactttgtga 8391368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 8934480 - 8934421
Alignment:
Q  137 gagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||  ||||||||||| |||||||| |||||| |||||||||||| | |||||||    
T  8934480 gagaaaaagaaagttgtcatagaaattgtcacaaatggttgttcaaatatcactactctt 8934421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 74
Target Start/End: Original strand, 10384211 - 10384242
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgac 74  Q
    ||||||||||||||||||||||||||||||||    
T  10384211 gagaaatgatatttgtacaactactttgtgac 10384242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 2362466 - 2362543
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||  |||| |||||||||||||| | ||||||| ||||||  ||||||||||||    
T  2362466 ctctccattgt-tttaaccaatgaaaaaagagagaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatat 2362543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 79
Target Start/End: Complemental strand, 5309113 - 5309075
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||||||| |||||||||| ||||    
T  5309113 atgagaaatgatatttgtacaaccactttgtgacaactt 5309075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 29293959 - 29293997
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  29293959 gagaaatgatatttgtacaactactttatgacaactttc 29293997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 30530549 - 30530471
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||||||   ||||||||| |||  ||||  |||||| ||||||||||||    
T  30530549 ctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataggttgtaccaaatggttgttcaaatat 30530471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 31290183 - 31290105
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||  ||||||||| ||||||||| | || |||| | ||||| ||||||||||||    
T  31290183 ctctccattgtttttaaccaatgaaaaaagagaaaaaataagttgtcacaaaagttgtgtgaaatggttgttcaaatat 31290105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 32821634 - 32821672
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  32821634 tgagaaatgatatttgtacaaccactttgtgacaacttt 32821672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 48872475 - 48872553
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||||||   | ||||||| |||  |||| ||||||| ||||||||||||    
T  48872475 ctctccattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtatcaaatggttgttcaaatat 48872553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 49453491 - 49453529
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  49453491 gagaaatgatatttgtacaaccactttgtgacaactttc 49453529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 5304804 - 5304718
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||| |||||||||||| ||||||||  |||||||||  | ||||||| | ||||| |||||||||||| | ||||||    
T  5304804 ctctccattgtttttaatcaatgaaaagagagaaaaa--aagttgtcaccaaaaattgtatgaaatggttgttcaaatatcactactct 5304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 5477226 - 5477185
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||| |||||||||||||||||| |||||||||| ||||||    
T  5477226 tatgataaatgatatttgtacaaccactttgtgacaactttc 5477185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 6829854 - 6829817
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  6829854 gagaaatgatatttgtacaactaatttgtgacaacttt 6829817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 7503470 - 7503507
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  7503470 gagaaatgatatttgtccaactactttgtgacaacttt 7503507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 18610773 - 18610810
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  18610773 gagaaatgatatttgtacaactattttgtgacaacttt 18610810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 37843503 - 37843466
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  37843503 gagaaatgatatttgtacaactactttttgacaacttt 37843466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 45740615 - 45740578
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  45740615 gagaaatgatatttgtacaaccactttgtgacaacttt 45740578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 49425738 - 49425775
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  49425738 gagaaatgatatttgtacaaccactttgtgacaacttt 49425775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 50141910 - 50141833
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| |||| |||| || |||||| | || |||||||| ||  |||||||||||    
T  50141910 ctctccattgtttttgaccaatgaaaagagagagaaaataaattgtcacaaaagttgtctcatatagttgttcaaata 50141833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 50226950 - 50226913
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  50226950 gagaaatgatatttgtacaaccactttgtgacaacttt 50226913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 18959099 - 18959175
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaa-aaaagaagttgtcatataaattgtctcaaatgattgttcaaa 183  Q
    ||||||||||| ||||| |||||||||| ||||| |||| || |||||  | ||||||| ||||||| |||||||||    
T  18959099 ctctccattgtttttgaccaatgaaaagagagaagaaaaaaaattgtcgcaaaaattgtatcaaatggttgttcaaa 18959175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 31493976 - 31494056
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaa-tgattgttcaaatatta 188  Q
    |||||||||| |||||  |||||||||  ||   ||||||||||||| | ||||||| ||||| |||||||||||||||||    
T  31493976 tctccattgtttttgactaatgaaaagaaagggtaaagaagttgtcacaaaaattgtatcaaaatgattgttcaaatatta 31494056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 34187273 - 34187313
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    |||||||||||||||||||||||||  ||||||| ||||||    
T  34187273 atgagaaatgatatttgtacaactatcttgtgaccactttc 34187313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 41507256 - 41507216
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  41507256 atgagaaatgatatttgtacaaccattttgtgacaactttc 41507216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 43640962 - 43640914
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcat 156  Q
    ||||||||||| ||||| |||||||||| |||||||| || ||||||||    
T  43640962 ctctccattgtttttgaccaatgaaaagagagaaaaatgaggttgtcat 43640914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 47015282 - 47015206
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    |||| ||||| ||| | |||||||||| ||| ||||| || ||||||||||| ||||||||  || |||||||||||    
T  47015282 tctctattgttttttaccaatgaaaagagaggaaaaaaaaattgtcatataagttgtctcatttggttgttcaaata 47015206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 50796000 - 50796028
Alignment:
Q  41 atgagaaatgatatttgtacaactacttt 69  Q
    |||||||||||||||||||||||||||||    
T  50796000 atgagaaatgatatttgtacaactacttt 50796028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 23258131 - 23258216
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||| | ||||||| ||||||| |||||||||||| | |||||||    
T  23258131 tccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactctt 23258216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 38128501 - 38128423
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| | ||||||| | ||||| ||||||||||||    
T  38128501 ctcttcattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaaattgtttaaaatggttgttcaaatat 38128423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 40413338 - 40413249
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    ||||||||||| |||||  ||||||||| ||||||||||||||| ||||| || |||| ||||||| |||||||||||| | ||||||||    
T  40413338 ctctccattgtttttgactaatgaaaagagagaaaaaagaagttatcataaaagttgtatcaaatggttgttcaaatatcactactctta 40413249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 11223834 - 11223747
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||   | || |||||||||| |||||||||||||| | ||||||    
T  11223834 ctctccattgttttttaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctcaaaagattgttcaaatatcactactct 11223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 28927777 - 28927855
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||||||| | ||||| | ||||||| ||||||||||||    
T  28927777 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaaattttatcaaatggttgttcaaatat 28927855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 3989001 - 3989078
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| |||||  ||||||||| ||||||||||||||||||| |||| ||||||||  || |||||||||||    
T  3989001 ctctccattgtttttgactaatgaaaagagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaata 3989078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 22767226 - 22767303
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| | || |||||||| | | |||||||||||    
T  22767226 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtctcatacggttgttcaaata 22767303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 24503013 - 24503090
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||| ||||| ||||| |||||||||| |||||||| |||||||||||| || |||||||||||| || ||||||||    
T  24503013 ctctctattgtttttgaccaatgaaaagagagaaaaatgaagttgtcataaaagttgtctcaaatggttattcaaata 24503090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 41344644 - 41344556
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||| |||||  | ||||||||||||  ||||||||||| | |||||||    
T  41344644 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttatcataagagttgtctcaaatggatgttcaaatatcactactctt 41344556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 28473520 - 28473442
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| ||||||||||||||||| | | |||||||||||| | | |||||||||||    
T  28473520 ctctccattgttttttaccaatgaaaagagagaaaaaagaagttgttaaaaaaattgtctcaattaaatgttcaaatat 28473442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 36740408 - 36740486
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| |||||||||||||||| |||||||   | ||||||| ||| ||||| ||||||| ||||||||||||    
T  36740408 ctctccattgtttttgatcaatgaaaagagagaaaatgaaggttgtcaaatagattgtatcaaatggttgttcaaatat 36740486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 426197 - 426254
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgt 165  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| |||| ||||    
T  426197 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgt 426254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 5502456 - 5502546
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagt--gagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||||| ||||||||||   |||| | |||||||||||| | ||||| | |||||||||||||||||||| | |||||||    
T  5502456 ctctccattgtttttgaccaatgaaaagatagagagagaagaagttgtcacaaaaattatatcaaatgattgttcaaatatcactactctt 5502546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 22852813 - 22852738
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaat 184  Q
    |||||||||| |||||  |||||||||||||||||||||| |||||| | ||||||| | ||||  ||||||||||    
T  22852813 tctccattgtttttgacaaatgaaaagtgagaaaaaagaaattgtcacaaaaattgtttaaaatagttgttcaaat 22852738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 37101661 - 37101582
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| |||||||||||||||||||  | ||||||| | ||||| ||||||||||||    
T  37101661 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgttcaaatat 37101582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 7678828 - 7678906
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| ||||||||||||||||| | | || |||| ||||||  ||||||||||||    
T  7678828 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaatagttgttcaaatat 7678906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 38779144 - 38779194
Alignment:
Q  137 gagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatat 186  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  38779144 gagaaaaaagaagttgtcacataaattgtctaaaatgagttgttcaaatat 38779194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 40713686 - 40713609
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||  ||||| |||||||||| || |||||| ||||| ||  ||||||||||||| ||||||||||||||||    
T  40713686 ctctccattgattttgaccaatgaaaagagataaaaaa-aagttatcgcataaattgtctcacatgattgttcaaatat 40713609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 44672208 - 44672130
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| ||||||||||||  ||||| | || |||| |||||| |||||||||||||    
T  44672208 ctctccattgtttttaaccaatgaaaagagagaaaaaagaatgtgtcacaaaagttgtatcaaataattgttcaaatat 44672130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 896003 - 896068
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatg 173  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||||| | | || ||||||||||||    
T  896003 ctctctattgtttttgaccaatgaaaagagagaaaaaagaagttgttaaaaaagttgtctcaaatg 896068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 42941644 - 42941584
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||| ||||||||||||||||||||||||| | ||| | | |||||| |||||||||||||    
T  42941644 caataaaaagtgagaaaaaagaagttgtcacaaaaaatatttcaaattattgttcaaatat 42941584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 1796495 - 1796534
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  1796495 tgagaaatgatatttgtacaaccactttgtgacaactttc 1796534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 74
Target Start/End: Original strand, 6004944 - 6004975
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgac 74  Q
    ||||||||||||||||||||||||||||||||    
T  6004944 gagaaatgatatttgtacaactactttgtgac 6004975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 6005040 - 6005115
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaa 183  Q
    ||||||||||| ||||| |||||||||| |||||||   ||||||||| |||| ||||  |||||| |||||||||    
T  6005040 ctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaataagttgtaccaaatggttgttcaaa 6005115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 37524403 - 37524356
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca 155  Q
    ||||||||||| ||||| |||||||||| ||||||||||| |||||||    
T  37524403 ctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtca 37524356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 5502371 - 5502409
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  5502371 gagaaatgatatttgtacaaccactttgtgacaactttc 5502409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 12732842 - 12732880
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  12732842 gagaaatgatatttgtacaaccactttgtgacaactttc 12732880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 24946098 - 24946136
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaag 146  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  24946098 ctctccattgtttttgaccaatgaaaagtgagaaaaaag 24946136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 42996558 - 42996604
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtc 154  Q
    ||||||||| | ||||| |||||||||| ||||||||||||||||||    
T  42996558 ctctccattatttttgaccaatgaaaagagagaaaaaagaagttgtc 42996604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 1370348 - 1370307
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    |||||||||||||||||||||||| ||||||| || ||||||    
T  1370348 tatgagaaatgatatttgtacaaccactttgtaacaactttc 1370307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 5782885 - 5782962
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||| ||||| |||||||||||||||| |||||||   ||||||||| |||  ||||  |||||| ||||||||||||    
T  5782885 tctctattgtttttgatcaatgaaaagagagaaaatgaaagttgtcaaataggttgtaccaaatggttgttcaaatat 5782962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 9047133 - 9047092
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    |||||||||||||||||||||||| ||||| |||| ||||||    
T  9047133 tatgagaaatgatatttgtacaaccactttttgacaactttc 9047092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 26871140 - 26871205
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatg 173  Q
    ||||||||||| ||||| |||||||||| |||| ||||||| |||||| |  | ||||||||||||    
T  26871140 ctctccattgtttttgaccaatgaaaagagagagaaaagaaattgtcacaagagttgtctcaaatg 26871205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 28927681 - 28927718
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  28927681 gagaaatgatatttgtacaaccactttgtgacaacttt 28927718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 36497661 - 36497698
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  36497661 gagaaatgatatttgtacaactattttgtgacaacttt 36497698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 37033076 - 37033000
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||  ||| ||||| ||||| ||| |||| ||||||||  ||||||||||||||    
T  37033076 ctctccattgtttttgaccaatgaaaaa-gaggaaaaaaaagttatcacataagttgtctcatttgattgttcaaata 37033000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 40102119 - 40102196
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||| | ||| | |||||||||| |||| |||| ||||||||| | || |||||||| ||| |||||||||||    
T  40102119 ctctccatttttttttaccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 40102196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 42012563 - 42012475
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||| | |||||||||| |||| |||||||||||||| || |||||||||  |||| ||||| |||||| | |||||||    
T  42012563 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcactaaaaattgtct-taatggttgttgaaatatcactactctt 42012475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 42047454 - 42047495
Alignment:
Q  131 aaaagtgagaaaaaagaagttgtcatataaattgtctcaaat 172  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||    
T  42047454 aaaagagagaaaaaagaagttgtcacataaattgtctaaaat 42047495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 45101396 - 45101433
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  45101396 gagaaatgatatttgtacaaccactttgtgacaacttt 45101433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 16011892 - 16011816
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaat 184  Q
    ||||||||||| ||| | |||||||||| |||||||||||| |||||| | ||||| | | ||||  ||||||||||    
T  16011892 ctctccattgtttttaaccaatgaaaagagagaaaaaagaaattgtcacaaaaattatattaaatagttgttcaaat 16011816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 22852910 - 22852874
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  22852910 gagaaatgatatttgtacaaccactttgtgacaactt 22852874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 26507866 - 26507826
Alignment:
Q  120 tttgatcaatgaaaagtgagaaaaaagaagttgtcatataa 160  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  26507866 tttgaccaatgaaaagagagaaaaaagaagttgtcacataa 26507826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 38844864 - 38844824
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||||| | |||||||| |||||    
T  38844864 tatgagaaatgatatttgtacaaccattttgtgacaacttt 38844824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 29383653 - 29383730
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||  || |||||||||||    
T  29383653 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataaattgtctcatttgcttgttcaaata 29383730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 26378360 - 26378273
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||   | || |||||| ||||| |||||||||||| | ||||||    
T  26378360 ctctccattgtctttgaccaatgaaaaatgagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactct 26378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 2582758 - 2582836
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||||||| | || |||| ||||||   |||||||||||    
T  2582758 ctctccattgtttttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatat 2582836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 21857532 - 21857466
Alignment:
Q  120 tttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||  || |||||||||    
T  21857532 tttgatcaataaaaagagagaaaaaagaagttgtcataaaaattgtctcatatagttattcaaatat 21857466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 16337045 - 16336957
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||||| |||||||||| |||| || ||||||||||| |  | ||||||||||||  ||||||||||| | |||||||    
T  16337045 ctctccattgtttttgaccaatgaaaagagagagaatagaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactctt 16336957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 34021147 - 34021059
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||| ||||| ||||| |||||||||| |||| |||||||||||| | | || ||||||||||||  ||||||||||| | |||||||    
T  34021147 ctctctattgtttttgaccaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctt 34021059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 12441538 - 12441576
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  12441538 gagaaatgatatttgtacaactactttgtgacaactttc 12441576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 24752339 - 24752405
Alignment:
Q  120 tttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||| ||||||||||||||||||||||||||||   | || |||||| ||||| ||||||||||||    
T  24752339 tttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatat 24752405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 32853119 - 32853041
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||| ||||| ||| | |||||||||  ||||||||||||||||||| | ||||||| ||||||  ||||||||||||    
T  32853119 ctctcaattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatat 32853041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 1196151 - 1196208
Alignment:
Q  128 atgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    |||||||| ||||||||||||||| ||| |||| ||||||||  ||||||||||||||    
T  1196151 atgaaaagagagaaaaaagaagttatcacataagttgtctcatttgattgttcaaata 1196208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 31480811 - 31480734
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||  ||| | |||| ||||| ||||||||||||||||||| |||||||||||||  |  |||||||||||    
T  31480811 ctctccattgattttaaccaataaaaagagagaaaaaagaagttgtcacataaattgtctcatttagttgttcaaata 31480734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 1897782 - 1897870
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||| |||||| ||||| |||||||||| ||||||||||| ||||||| | || |||| ||||||   ||||||||||| | |||||||    
T  1897782 ctcttcattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctt 1897870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 32457325 - 32457286
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  32457325 atgagaaatgatatttgtacaaccactttgtgacaacttt 32457286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 185
Target Start/End: Complemental strand, 29643391 - 29643318
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    |||||||| ||| |||||| |||||  | ||||||||| ||||||||||||||||||||  | ||||||||||||    
T  29643391 tccattgttttttatcaataaaaagaaa-aaaaaagaaattgtcatataaattgtctcatttaattgttcaaata 29643318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 194
Target Start/End: Complemental strand, 31255424 - 31255350
Alignment:
Q  120 tttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactc 194  Q
    |||||||||| ||||   |||||||||||||||||||| || |||| ||||||| ||| |||||||  |||||||    
T  31255424 tttgatcaattaaaaaatagaaaaaagaagttgtcataaaagttgtttcaaatggttgatcaaataaaaatactc 31255350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 27334858 - 27334895
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  27334858 gagaaatgatatttgtacaactattttgtgacaacttt 27334895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 27395598 - 27395635
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  27395598 gagaaatgatatttgtacaactattttgtgacaacttt 27395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 33527432 - 33527465
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtga 73  Q
    ||||||||||||||||| ||||||||||||||||    
T  33527432 tatgagaaatgatatttatacaactactttgtga 33527465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 6435037 - 6435073
Alignment:
Q  44 agaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||| |||||||||| |||||    
T  6435037 agaaatgatatttgtacaaccactttgtgacaacttt 6435073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 12177576 - 12177635
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgactt--tcattcatattcacattata 99  Q
    ||||||||| |||||||||||||| |||||||| ||||  || |||||| ||||||||||    
T  12177576 tgagaaatgttatttgtacaactattttgtgacaactttctctttcatactcacattata 12177635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 22492004 - 22491917
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatattaatactct 195  Q
    ||||||||||  ||||| |||| ||||| |||||||| |||||||||| |||| || ||| |||||| |||||||||||| | ||||||    
T  22492004 ctctccattgcttttgaccaatcaaaagagagaaaaa-gaagttgtcacataagttttctaaaatgagttgttcaaatatcactactct 22491917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 28549083 - 28549043
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  28549083 atgaaaaatgatatttgtacaactgctttgtgacaactttc 28549043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 32644621 - 32644661
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||||||| ||| |||| ||||||    
T  32644621 atgagaaatgatatttgtacaactattttttgacaactttc 32644661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 185
Target Start/End: Original strand, 1889247 - 1889320
Alignment:
Q  112 ccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  1889247 ccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataaattgtctcatttgattgttcaaata 1889320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 3091837 - 3091925
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| | || |||| |||||| ||||||||||||| | |||||||    
T  3091837 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataattgttcaaatatcactactctt 3091925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 14714082 - 14714160
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||| ||||| |||||||||||||||| |||| |||||||||||||| | |||||||||||||||  |||||||||||    
T  14714082 ctctcaattgtttttgatcaatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatat 14714160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 13104575 - 13104652
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||||| ||||||||| | ||||||||||| ||| |||||||||||    
T  13104575 ctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaata 13104652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 32750094 - 32750171
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||||| ||||||||| | ||||||||||| ||| |||||||||||    
T  32750094 ctctccattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaata 32750171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 42251892 - 42251805
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    |||||||  ||||| |||||||||| ||||||||||||||||||| |||| ||||  |||||||||||| |||||| | |||||||||    
T  42251892 tccattgattttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgttccaaatgattgtttaaatatcactactcttat 42251805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 11229296 - 11229218
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||   | || |||||| ||||| ||||||||||||    
T  11229296 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatat 11229218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 43725301 - 43725379
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||   | || |||||| ||||| ||||||||||||    
T  43725301 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatat 43725379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 5067616 - 5067539
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttg-tcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| ||  | || |||||| ||||||||||||||||||    
T  5067616 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgatc--aaaagttgtctaaaatgattgttcaaatat 5067539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 3959992 - 3960071
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattg-tctcaaatgattgttcaaatat 186  Q
    ||||||||||| |||||||||||||||| |||||||| ||| |||||||| || ||| || |||||| ||||||||||||    
T  3959992 ctctccattgtttttgatcaatgaaaagagagaaaaatgaaattgtcataaaagttgttcgcaaatggttgttcaaatat 3960071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 42081133 - 42081220
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||| ||||| ||||| |||||||||  ||||||||||||||||| | | |||||||||||||| | ||||||||||| | ||||||    
T  42081133 ctctctattgtttttgaccaatgaaaatagagaaaaaagaagttgttaaaaaaattgtctcaaattaatgttcaaatatcactactct 42081220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 11164351 - 11164273
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| ||||||||||||||||||| | || |||| ||||||  ||||||||||||    
T  11164351 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatat 11164273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 14140314 - 14140236
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||||||||||| |||||| | || || | | ||||||||||||||||||    
T  14140314 ctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttattttaaatgattgttcaaatat 14140236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 22390248 - 22390326
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||||||| |  | ||||||||||||  |||||||||||    
T  22390248 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatat 22390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 23344964 - 23344886
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||| ||||| ||||| |||||||||| |||| |||||||||||||| |  | ||||||||||||| |||||||||||    
T  23344964 ctctctattgtttttgaccaatgaaaagagagagaaaagaagttgtcagaagagttgtctcaaatgaatgttcaaatat 23344886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 25801786 - 25801708
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||  ||| | || |||||||||||  ||||||||||||    
T  25801786 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagtgatcacaaaagttgtctcaaattgttgttcaaatat 25801708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 34249676 - 34249754
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgag-aaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||| |||||| ||||||||| | ||||||||||| ||| |||||||||||    
T  34249676 ctctccattgtttttgaccaatgaaaagagagaaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaata 34249754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 7086099 - 7086022
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||| ||||| ||||| |||||||||| |||| |||| ||||||||| | ||||||||||| ||| |||||||||||    
T  7086099 ctctctattgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaaattgtctcatatggttgttcaaata 7086022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 196
Target Start/End: Complemental strand, 43650519 - 43650434
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||||||  ||||| |||| ||||| |||||||||||| |||||| |||| |||| ||||||||||||| |||||| | |||||||    
T  43650519 tccattgattttgaccaataaaaagagagaaaaaagaaattgtcacataagttgtatcaaatgattgtttaaatatcattactctt 43650434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 31296818 - 31296730
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||  ||||| |||||||||| |||||||||||| |||||| |||| ||||| || ||| || ||||||||| | |||||||    
T  31296818 ctctccattgattttgaccaatgaaaagagagaaaaaagaaattgtcacataagttgtcccatatggttattcaaatatcactactctt 31296730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 8555267 - 8555188
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattg-tctcaaatgattgttcaaatat 186  Q
    ||||||||||| |||||||||||||||| |||||||| || ||||||||| || ||| |  ||||| |||||||||||||    
T  8555267 ctctccattgtttttgatcaatgaaaagagagaaaaaggaggttgtcataaaagttgttggcaaataattgttcaaatat 8555188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 18917738 - 18917797
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    |||||||||| ||||||||||||||||||| |||||||||||||  |  |||||||||||    
T  18917738 caatgaaaagagagaaaaaagaagttgtcacataaattgtctcattttgttgttcaaata 18917797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 21490701 - 21490744
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactttcatt 84  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  21490701 atgagaaatgatatttgtacaactactttgtgacaactatcatt 21490744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 23045268 - 23045334
Alignment:
Q  119 atttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    |||||| |||||||||  ||||||||||||||||||| |||| ||||||||  || |||||||||||    
T  23045268 atttgaccaatgaaaatagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaata 23045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 36376826 - 36376748
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||| | | ||||| |||||| |   |||||||||||    
T  36376826 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgttaaaaaaattatctcaattagatgttcaaatat 36376748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 4263839 - 4263782
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgt 165  Q
    ||||||||||| ||||| |||||| ||  ||||||||||||||||||||| |||||||    
T  4263839 ctctccattgtttttgaccaatgagaaaagagaaaaaagaagttgtcataaaaattgt 4263782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 6639447 - 6639370
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||| | |||||||||| |||| |||||||||||||| |||| || |||||  || |||||||||||    
T  6639447 ctctccattgttttttaccaatgaaaagagagagaaaagaagttgtcacataagttatctcatttggttgttcaaata 6639370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 19695666 - 19695590
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||| ||||| ||||||||| |||| ||||||||  || |||||||||||    
T  19695666 ctctccattgtttttgaccaatgaaaagagaggaaaaa-aagttgtcacataagttgtctcatttggttgttcaaata 19695590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 23880191 - 23880268
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||| | ||| | |||||||||| ||||||||| || |||||||| || |||||||| ||| |||||||||||    
T  23880191 ctctccatttttttttaccaatgaaaagagagaaaaaataaattgtcataaaagttgtctcatatggttgttcaaata 23880268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 13711157 - 13711245
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||| | |||||||||| ||||||||||||||||||| | || ||||   ||||  |||||||||||| | |||||||    
T  13711157 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtacaaaatagttgttcaaatatcactactctt 13711245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 31629601 - 31629641
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  31629601 tatgagaaatgatatttgtacaactactttttgacaacttt 31629641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 120 - 155
Target Start/End: Original strand, 7121470 - 7121505
Alignment:
Q  120 tttgatcaatgaaaagtgagaaaaaagaagttgtca 155  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7121470 tttgatcaatgaaaagtaagaaaaaagaagttgtca 7121505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 30856805 - 30856844
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  30856805 atgagaaatgatatttgtacaaccactttgtgacaacttt 30856844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 37631342 - 37631263
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattg-tctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||| ||| ||||||||||| ||||||||| || ||| |  |||||| ||||||||||||    
T  37631342 ctctccattgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatat 37631263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 14891149 - 14891092
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttcat--tcatattcacattat 98  Q
    ||||||||||||||||||||||| |||||||  |||||| |  |||||||||||||||    
T  14891149 gagaaatgatatttgtacaactattttgtgataactttctttctcatattcacattat 14891092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 29795532 - 29795610
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| ||||||||||  ||||||| | || |||| ||||||   |||||||||||    
T  29795532 ctctccattgtttttgaccaatgaaaagagagaaaaaagtggttgtcacaaaagttgtttcaaattgatgttcaaatat 29795610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 34442209 - 34442287
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||| ||||| |||| |||||| ||||||| | ||||||| ||||||   |||||||||||    
T  34442209 ctctccattgtttttgaccaataaaaagagagagaaaagaggttgtcagaaaaattgtttcaaatagatgttcaaatat 34442287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 36133088 - 36133158
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||||||||| ||||||||||||||||||| | || |||| | ||||  |||||||||||| | |||||||    
T  36133088 caatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactctt 36133158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 36435777 - 36435855
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||| |||||| ||| |||||||||||| |||| |||||| ||||||| | || |||| |||||| | |||||||||||    
T  36435777 ctcttcattgttttttatcaatgaaaagagagagaaaagaggttgtcacaaaagttgtttcaaataaatgttcaaatat 36435855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 4738643 - 4738606
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  4738643 gagaaatgatatttgtacaaccactttgtgacaacttt 4738606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 5067717 - 5067680
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  5067717 gagaaatgatatttgtacatctactttgtgacaacttt 5067680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 14140408 - 14140371
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  14140408 gagaaatgatatttgtacaactaatttgtgacaacttt 14140371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 33296142 - 33296105
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  33296142 gagaaatgatatttgtacaaccactttgtgacaacttt 33296105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 36435681 - 36435718
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  36435681 gagaaatgatatttgtacaaccactttgtgacaacttt 36435718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 7428525 - 7428602
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| |||||||||||| ||||||||  |||||||||  | ||||||| | ||||| ||||||||||||    
T  7428525 ctctccattgtttttaatcaatgaaaagagagaaaaa--aagttgtcaccaaaaattgtatgaaatggttgttcaaatat 7428602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Original strand, 12600046 - 12600078
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtga 73  Q
    ||||||||||||||||||||||| |||||||||    
T  12600046 atgagaaatgatatttgtacaaccactttgtga 12600078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 12600162 - 12600222
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||||| ||||||||||||||||||| | || |||| | ||||  ||||||||||||    
T  12600162 caatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatat 12600222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 19913880 - 19913968
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaa-ttgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||| | |||||||||| ||||||||| |||||||||   ||| |||| | ||||| |||||||||||| | ||||||    
T  19913880 ctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcaccgaaagttgtatgaaatggttgttcaaatatcactactct 19913968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 9e-18; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 39595370 - 39595448
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| | || |||| ||||||| ||||||||||||    
T  39595370 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatat 39595448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 34381108 - 34381186
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||||||| |||||||||| | ||||| | ||||||| ||||||||||||    
T  34381108 ctctccattgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaattatatcaaatggttgttcaaatat 34381186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 19376107 - 19376030
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||| |||| ||||||||  |  |||||||||||    
T  19376107 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgtctcatttagttgttcaaata 19376030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 20719990 - 20719902
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||| | ||||| |||||||||| |||| |||||||||||||| | || ||||||||||||  ||||||||||| | |||||||    
T  20719990 ctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactctt 20719902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 33567214 - 33567126
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||||| |||||||||| |||||||||||| |||||| | || |||| ||||||| ||||||| |||| | |||||||    
T  33567214 ctctccattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactactctt 33567126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 193
Target Start/End: Original strand, 29498229 - 29498308
Alignment:
Q  114 attgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatact 193  Q
    ||||| |||||  ||| ||||| |||| |||| ||||||||||| || ||||||||||||||||||||||||||| ||||    
T  29498229 attgtttttgactaataaaaagagagagaaaataagttgtcataaaatttgtctcaaatgattgttcaaatattattact 29498308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 125188 - 125266
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||| ||||| ||||| |||||||||| ||||||||||||||||||  | || |||| ||||||| ||||||||||||    
T  125188 ctctctattgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaatggttgttcaaatat 125266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 471910 - 471956
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtc 154  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  471910 ctctccattgtttttgatcaatgaaaagagagaaaaaagaagttgtc 471956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 3728959 - 3728902
Alignment:
Q  127 aatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  3728959 aatgaaaagagagaaaaa-gaagttgttataaaaattgtctcaaatgattgttcaaata 3728902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 31329089 - 31329023
Alignment:
Q  120 tttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||||||||||| || || ||||||||||||| |||||||||| || ||| ||||||||||||    
T  31329089 tttgatcaatgaaaagagaaaataaagaagttgtcacataaattgtcccacatggttgttcaaatat 31329023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 27392677 - 27392600
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| || |||||| ||||||||| | || |||||||| ||| |||||||||||    
T  27392677 ctctccattgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 27392600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 2117615 - 2117527
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||| | |||||||||  ||||||||||||||||||| | || |||| ||||||  |||||||||||| | |||||||    
T  2117615 ctctccattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctt 2117527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 6865762 - 6865682
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatatta 188  Q
    ||||||||||| ||||| |||||||||| ||||||| | ||||||||| ||| ||| | ||||||  ||||||||||||||    
T  6865762 ctctccattgtttttgaccaatgaaaagagagaaaataaaagttgtcaaatagattatatcaaatagttgttcaaatatta 6865682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 19127220 - 19127308
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| || || ||||||||| |||||||||||||||||||  | || |||| | ||||| |||||||||||| | |||||||    
T  19127220 ctctccattgttttggaccaatgaaaaatgagaaaaaagaagttgtcgcaaaagttgtttaaaatggttgttcaaatatcactactctt 19127308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 33910063 - 33909975
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatattaatactct 195  Q
    ||||||||| | ||| |||||||||||| |||| |||||||||||||| ||||||||||| | || | |||||||||||| | ||||||    
T  33910063 ctctccattatttttaatcaatgaaaagagagagaaaagaagttgtcacataaattgtctaatataagttgttcaaatatcactactct 33909975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 5130353 - 5130262
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatattaatactcttat 198  Q
    ||||||||||| ||| | |||||||||| |||||||||||||||||||  | ||||||| | ||||  |||||||||||| | |||||||||    
T  5130353 ctctccattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatcactactcttat 5130262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 11767947 - 11767876
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    ||||||||||||||||||||||||||||   | || |||||| ||||| |||||||||||| | ||||||||    
T  11767947 caatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactctta 11767876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 15531848 - 15531786
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtcatataaa--ttgtctcaaatgattgttcaaatat 186  Q
    |||||||||| |||||||||||| |||||||| |||  ||||||||| |||||||||||||||    
T  15531848 caatgaaaagagagaaaaaagaaattgtcataaaaaaattgtctcaactgattgttcaaatat 15531786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 29402278 - 29402353
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaa 183  Q
    ||||||||||  ||||| |||| |||||  |||||||||||||||||| |||| |||||||| ||| |||||||||    
T  29402278 ctctccattgattttgaccaataaaaagaaagaaaaaagaagttgtcacataagttgtctcacatggttgttcaaa 29402353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 12718355 - 12718277
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||  ||| |||||||||||||| | |||||||   ||||| ||||||||||||    
T  12718355 ctctccattgtttttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttgttcaaatat 12718277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 24431593 - 24431515
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||| ||| ||| | |||||||||| |||||||| |||||||||| |  | |||||||||||| ||||||||||||    
T  24431593 ctctccaatgtgtttaaccaatgaaaagagagaaaaatgaagttgtcacaatagttgtctcaaatggttgttcaaatat 24431515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 36624414 - 36624492
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||| |||||| ||||| |||||||||| |||||||   || |||||| ||||||||| ||||||| ||||||||||||    
T  36624414 ctcttcattgtttttgaccaatgaaaagagagaaaatgaaaattgtcaaataaattgtatcaaatgcttgttcaaatat 36624492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 125092 - 125129
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||||||||||||| |||||    
T  125092 gagaaatgatatttgtacaactactttgtgacaacttt 125129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 11666275 - 11666320
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgt 153  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||||    
T  11666275 ctctccattgtttttgaccaatgaaaagagagaaaaaagaagttgt 11666320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 14323943 - 14323898
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgt 153  Q
    ||||||||||| ||||| |||| |||||||||||||||||||||||    
T  14323943 ctctccattgtttttgaccaataaaaagtgagaaaaaagaagttgt 14323898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 19127120 - 19127160
Alignment:
Q  39 atatgagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  19127120 atatgagaaatgatatttgtacaaccactttgtgacaactt 19127160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 28811524 - 28811588
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaat 172  Q
    ||||||||||| ||||| |||||||||| ||||||||||| ||||||| | || |||| ||||||    
T  28811524 ctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat 28811588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 33243716 - 33243628
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||| | |||||||||| ||||||||| || |||||| | || || ||| ||||| |||||||||||| | |||||||    
T  33243716 ctctccattgtttttaaccaatgaaaagagagaaaaaataaattgtcacaaaagttatctgaaatggttgttcaaatatcattactctt 33243628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 39595269 - 39595309
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  39595269 tatgagaaatgatatttgtacaaccactttgtgacaacttt 39595309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 40566192 - 40566104
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaa-aagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| |||||||||| ||||||| || ||||||| | | || ||||||||||||  ||||||||||| | ||||||    
T  40566192 ctctccattgtttttgaccaatgaaaagagagaaaataaaaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 40566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 11306792 - 11306879
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||| ||||| ||| | |||||||||| ||||||||||||||||||  | || |||| ||||||  |||||||||||| | ||||||    
T  11306792 ctctctattgtttttaaccaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatcaaatagttgttcaaatatcactactct 11306879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 13613939 - 13613860
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| |||||||||||| ||||||  | || |||| | ||||||||||||||||||    
T  13613939 ctctccattgtttttaaccaatgaaaagagagaaaaaagaaattgtcaccaaaagttgtatgaaatgattgttcaaatat 13613860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 91311 - 91389
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||| |||||| ||||| |||||||||| ||||||| | | ||||||| |||  |||| ||||||| ||||||||||||    
T  91311 ctcttcattgtttttgaccaatgaaaagagagaaaagaaaggttgtcaaataggttgtatcaaatggttgttcaaatat 91389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 6865847 - 6865809
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  6865847 gagaaatgatatttgtacaaccactttgtgacaactttc 6865809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 12779581 - 12779503
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||  ||| |||||||||||||| | |||||||   ||||| || |||||||||    
T  12779581 ctctccattgtttttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttattcaaatat 12779503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 81
Target Start/End: Original strand, 29227721 - 29227755
Alignment:
Q  47 aatgatatttgtacaactactttgtgacgactttc 81  Q
    |||||||||||||||||||||||||||| ||||||    
T  29227721 aatgatatttgtacaactactttgtgacaactttc 29227755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 31284369 - 31284291
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| |||| |||||||||||||  | || |||| | ||||| ||||||||||||    
T  31284369 ctctccattgtttttaaccaatgaaaagagagagaaaagaagttgtcgcaaaagttgtatgaaatggttgttcaaatat 31284291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 80
Target Start/End: Original strand, 34381011 - 34381049
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  34381011 tgagaaatgatatttgtacaaccactttgtgacaacttt 34381049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 34767392 - 34767314
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||| | ||||| |||||||||| |||| |||||||||||||| |  | |||||||||||   |||||||||||    
T  34767392 ctctccattatttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatagatgttcaaatat 34767314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 42909815 - 42909861
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtc 154  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||||||    
T  42909815 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtc 42909861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 7927465 - 7927526
Alignment:
Q  126 caatgaaaagtgagaaaaaagaagttgtca-tataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||||| |||||| |||||||||| | || ||||||| | ||||||||||||||||||    
T  7927465 caatgaaaagagagaaagaagaagttgttactaaaaattgtattaaatgattgttcaaatat 7927526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 13734335 - 13734262
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttca 181  Q
    ||||||||||| ||||| |||||||||| |||||||   ||||||||| ||| |||||  |||||| |||||||    
T  13734335 ctctccattgtttttgaccaatgaaaagagagaaaaggaaagttgtcaaatagattgtaccaaatggttgttca 13734262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 28811429 - 28811466
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  28811429 gagaaatgatatttgtacaaccactttgtgacaacttt 28811466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Original strand, 39458737 - 39458794
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgt 165  Q
    ||||||||||| ||||| |||||||||| || |||||| ||||||||| | |||||||    
T  39458737 ctctccattgtttttgaccaatgaaaagagataaaaaaaaagttgtcacaaaaattgt 39458794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 1774354 - 1774318
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  1774354 gagaaatgatatttgtacatctactttgtgacaactt 1774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 3960144 - 3960096
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcat 156  Q
    ||||||||||| |||||||||||||||| || ||||| || ||||||||    
T  3960144 ctctccattgtttttgatcaatgaaaagagaaaaaaatgaggttgtcat 3960096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 4098620 - 4098660
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||| |||||||||||||||||||| |||||||| |||||    
T  4098620 tatgataaatgatatttgtacaactattttgtgacaacttt 4098660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 14070574 - 14070526
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcat 156  Q
    ||||||||||| |||||||||| | ||||||||||||  ||||||||||    
T  14070574 ctctccattgtttttgatcaataagaagtgagaaaaacaaagttgtcat 14070526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 14070688 - 14070656
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtga 73  Q
    ||||||||||||||||||||||||| |||||||    
T  14070688 atgagaaatgatatttgtacaactattttgtga 14070656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 16143388 - 16143428
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||||| | |||||||| ||||||    
T  16143388 atgagaaatgatatttgtacaaccattttgtgacaactttc 16143428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 23991205 - 23991169
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  23991205 gagaaatgatatttgtacaaccactttgtgacaactt 23991169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 36713249 - 36713213
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  36713249 gagaaatgatatttgtacaaccactttgtgacaactt 36713213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 43482491 - 43482539
Alignment:
Q  138 agaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||||||||||||| | ||||||| ||||||  ||||||||||||    
T  43482491 agaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatat 43482539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 25887679 - 25887757
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||   | || |||||| ||||| ||||||||||||    
T  25887679 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatat 25887757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 186
Target Start/End: Original strand, 10591250 - 10591326
Alignment:
Q  109 tctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||||| ||| | |||||||| ||||||||||||||||||||| | || |||||||||||| ||||||||||||    
T  10591250 tctccattgttttttaccaatgaaa-gtgagaaaaaagaagttgtcacaaaagttgtctcaaatggttgttcaaatat 10591326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 19510332 - 19510255
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||| | | || |||||| | |||||||||||||||    
T  19510332 ctctccattgtttttgatcaatgaaaagagagaaaaaataagttgttacaaaagttgtcttatatgattgttcaaata 19510255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 37351965 - 37351876
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    ||||||||||| ||||| |||| ||||| |||||||||||| |||||| | || || | |||||||||||||||||||| | ||||||||    
T  37351965 ctctccattgtttttgaccaataaaaagagagaaaaaagaaattgtcacaaaagttatatcaaatgattgttcaaatatcactactctta 37351876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 46651768 - 46651856
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||||| |||||||||| ||||||| ||||||||||| |  |||||| ||| ||| |||||||||||| | |||||||    
T  46651768 ctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagaattgtatcatatggttgttcaaatatcactactctt 46651856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 21858846 - 21858921
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||| | || |||| | ||||| ||||||||||||    
T  21858846 tccattgtttttgatcaatgaaaagtgaaaaaaaagaagttatcacaaaagttgtttaaaatggttgttcaaatat 21858921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 41966424 - 41966511
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    |||| |||||| ||||| |||| |||| |||||||||||||||||||||| ||||||| | ||||  |||||||||||| | ||||||    
T  41966424 ctcttcattgtttttgaccaataaaaactgagaaaaaagaagttgtcataaaaattgtttaaaatagttgttcaaatatcactactct 41966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 2790278 - 2790352
Alignment:
Q  113 cattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatat 186  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| |||| |||||| |||||| ||||||||||||    
T  2790278 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatat 2790352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 44894449 - 44894371
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| |||| |||||||||||||| | ||||| |||||||||  |||||||||||    
T  44894449 ctctccattgttttttaccaatgaaaagagagataaaagaagttgtcacaaaaattatctcaaatggatgttcaaatat 44894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 47193023 - 47193101
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||   | || || ||| ||||| ||||||||||||    
T  47193023 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatggttgttcaaatat 47193101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 155956 - 155867
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    ||||||| ||| ||||| ||||||||||| ||||||||||||||||   | || |||||| ||||| |||||||||||| | ||||||||    
T  155956 ctctccactgtttttgaccaatgaaaagtaagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactctta 155867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 43213404 - 43213465
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctca 169  Q
    ||||||||| | |||||||||| ||||  ||||||||||||||||||||||| |||||||||    
T  43213404 ctctccattatttttgatcaataaaaaaagagaaaaaagaagttgtcatatacattgtctca 43213465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 45607120 - 45607165
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgt 153  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  45607120 ctctccattgtttttgaccaatgaaaagtgagaaaaaagaagttgt 45607165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 43445516 - 43445591
Alignment:
Q  121 ttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||| |||| |||||  ||||||||||| |||||| | ||||||| |||||||||||||||||||| | |||||||    
T  43445516 ttgaccaataaaaagaaagaaaaaagaaattgtcacaaaaattgtatcaaatgattgttcaaatatcactactctt 43445591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 45432040 - 45432118
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatat 186  Q
    ||||||||||| ||||| |||| ||||  ||||||||||||||||||| |||| |||||| |||||| ||||||||||||    
T  45432040 ctctccattgtttttgaccaataaaaaa-gagaaaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatat 45432118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 5978675 - 5978753
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| ||||||| ||||||||||| |  | |||| ||| ||| ||||||||||||    
T  5978675 ctctccattgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatat 5978753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 12102684 - 12102610
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaa 182  Q
    ||||||||||| ||| | |||||||||| ||||||||| ||||||||| | || |||||| ||||| ||||||||    
T  12102684 ctctccattgtttttaaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctgaaatggttgttcaa 12102610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 5198732 - 5198656
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatga-ttgttcaaatat 186  Q
    |||||||| ||||| | |||||||| |||||||||||| || ||| |||| |||||| |||||| ||||||||||||    
T  5198732 tccattgtttttgaccgatgaaaagagagaaaaaagaaattatcacataagttgtctaaaatgagttgttcaaatat 5198656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 12141986 - 12142058
Alignment:
Q  114 attgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||| ||||| ||||||||||  |||||||| ||||||||| | || |||| ||||||| ||||||||||||    
T  12141986 attgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatat 12142058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 22330697 - 22330653
Alignment:
Q  37 agatatgagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||    
T  22330697 agataagagaaatgatatttgtacaaccactttgtgacaactttc 22330653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 195
Target Start/End: Complemental strand, 38995995 - 38995911
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    |||||||  ||||| |||||||||  || ||||||||| |||||| |||| ||||  || |||||||||||||||| ||||||||    
T  38995995 tccattgattttgaccaatgaaaaaagaaaaaaaagaaattgtcacataagttgttacatatgattgttcaaatatcaatactct 38995911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 48866905 - 48866817
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| |||||  ||||||||| ||||||||||| ||||||| | || |||| ||||||   ||||||||||| | |||||||    
T  48866905 ctctccattgtttttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctt 48866817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 2414159 - 2414235
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||| |||| ||  |||||||||| |||||||||||||| |  ||||||||||||    
T  2414159 ctctccattgtttttaaccaatgaaaagagagagaa--gaagttgtcacataaattgtctcaactagttgttcaaatat 2414235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 74
Target Start/End: Original strand, 27778079 - 27778110
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgac 74  Q
    ||||||||||||||||||||||||||||||||    
T  27778079 gagaaatgatatttgtacaactactttgtgac 27778110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 30180603 - 30180690
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactct 195  Q
    ||||||||||| ||||| | |||||||| ||||||||||| ||||||  | ||||||| ||||||   ||||||||||| | ||||||    
T  30180603 ctctccattgtttttgacccatgaaaagagagaaaaaagaggttgtcgcaaaaattgtttcaaatagatgttcaaatatcactactct 30180690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 80
Target Start/End: Complemental strand, 41077573 - 41077534
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  41077573 atgagaaatgatatttttacaactactttgtgacaacttt 41077534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 2469703 - 2469741
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  2469703 gagaaatgatatttgtacaaccactttgtgacaactttc 2469741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 5378723 - 5378801
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||||||||| |||| ||||||| |||| | | || ||||||||||||  |||| ||||||    
T  5378723 ctctccattgtttttgaccaatgaaaagagagagaaaagaaattgttaaaaaagttgtctcaaatggatgtttaaatat 5378801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 7077728 - 7077650
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||| | |||||||||||||| ||||| ||||||||| | || |||| | ||||  ||||||||||||    
T  7077728 ctctccattgtttttaaccaatgaaaagtgaggaaaaaaaagttgtcacaaaagttgtttaaaatagttgttcaaatat 7077650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 26153776 - 26153834
Alignment:
Q  128 atgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    |||||||| ||||||  ||||||||||| |||| |||||||| ||| ||||||||||||    
T  26153776 atgaaaagagagaaatgagaagttgtcacataagttgtctcatatgtttgttcaaatat 26153834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 37352050 - 37352012
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactttc 81  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  37352050 gagaaatgatatttgtacaaccactttgtgacaactttc 37352012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 39875784 - 39875730
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaat 162  Q
    |||| |||||| ||||| |||||||||| |||||||||||| |||||| ||||||    
T  39875784 ctcttcattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacataaat 39875730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 196
Target Start/End: Original strand, 24700220 - 24700305
Alignment:
Q  111 tccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    |||||||  ||||| |||||||||| || |||||||||||| |||  |||||||||  | |||  ||||||||||||| |||||||    
T  24700220 tccattgattttgaccaatgaaaagagaaaaaaaagaagttatcacctaaattgtcctatatggctgttcaaatattactactctt 24700305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 26153642 - 26153683
Alignment:
Q  39 atatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||||||| ||| |||| |||||    
T  26153642 atatgagaaatgatatttgtacaactattttatgacaacttt 26153683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 27688646 - 27688706
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgactttcat--tcatattcacattata 99  Q
    ||||||||||||||||||| ||||||| |||||| |||||| |  ||||| ||||||||||    
T  27688646 atgagaaatgatatttgtataactactatgtgacaactttctttctcatactcacattata 27688706  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 28824599 - 28824676
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| | ||| |||||||||| ||| ||| | ||||||||| |||| ||||||||  || |||||||||||    
T  28824599 ctctccattgtttctgaccaatgaaaagagaggaaacaaaagttgtcacataagttgtctcatttggttgttcaaata 28824676  T

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Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 33684776 - 33684853
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||| | ||||||||||  |||||||||||||||||| | || |||| ||| ||  |||||||||||    
T  33684776 ctctccattgttttttaccaatgaaaagatagaaaaaagaagttgtcacaaaagttgtttcatatagttgttcaaata 33684853  T

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Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 1814381 - 1814341
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||||||| |||| ||| |||||    
T  1814381 tatgagaaatgatatttgtacaactattttgcgacaacttt 1814341  T

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Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 31982056 - 31982088
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgac 74  Q
    |||||||||||||||||||||| ||||||||||    
T  31982056 tgagaaatgatatttgtacaaccactttgtgac 31982088  T

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Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 45607024 - 45607060
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgactt 79  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  45607024 gagaaatgatatttgtacatctactttgtgacaactt 45607060  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Complemental strand, 219639 - 219580
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtct 167  Q
    ||||||||||| ||||| |||||||||| |||| |||||||||||||| |||||||||||    
T  219639 ctctccattgtttttgaccaatgaaaagagagagaaaagaagttgtcacataaattgtct 219580  T

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Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 219735 - 219698
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  219735 gagaaatgatatttgtacaaccactttgtgacaacttt 219698  T

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Target: scaffold0501 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 10491 - 10414
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||||||||| ||||| |||||||||| |||| |||| ||||||||| | || |||||||| ||| |||||||||||    
T  10491 ctctccattgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 10414  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 18100 - 18188
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctta 197  Q
    ||||||||||| ||| | |||||||||| ||||||||| ||||||||||| || |||| ||||||  |||||||||||| | ||||||||    
T  18100 ctctccattgtttttaaccaatgaaaagagagaaaaaa-aagttgtcataaaagttgtatcaaatagttgttcaaatatcactactctta 18188  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 6523 - 6601
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||| |||    | ||||||||||||  |||||||||||    
T  6523 ctctcaattgtttttgatcaatgaaaagagagaaaaaagaagttatcacgagagttgtctcaaatggatgttcaaatat 6601  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 440715 - 440755
Alignment:
Q  40 tatgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  440715 tatgagaaatgatatttgtacaactactttatgacaacttt 440755  T

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Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 9823 - 9746
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaata 185  Q
    ||||| ||||| ||||| |||||||||| || |||||| ||||||||| | || ||| |||| |||||||||||||||    
T  9823 ctctctattgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgcctcatatgattgttcaaata 9746  T

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Target: scaffold0154; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 19762 - 19725
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  19762 gagaaatgatatttgtacaactattttgtgacaacttt 19725  T

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Target: scaffold0508 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 11511 - 11423
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||||| ||||| |||||||||||||||||||| || ||||   | || |||||| ||||  |||||||||||| | |||||||    
T  11511 ctctccattgtttttgaccaatgaaaagtgagaaaaaataaattgtatcaaaagttgtctaaaatagttgttcaaatatcactactctt 11423  T

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Target: scaffold0508; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 11608 - 11571
Alignment:
Q  42 tgagaaatgatatttgtacaactactttgtgacgactt 79  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  11608 tgagaaatgatatttgtacatctactttgtgacaactt 11571  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 11288 - 11352
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaat 172  Q
    ||||||||||| ||||| |||||||||| ||||||||||| ||||||| | || |||| ||||||    
T  11288 ctctccattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat 11352  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 80
Target Start/End: Original strand, 113623 - 113662
Alignment:
Q  41 atgagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  113623 atgagaaatgatatttgtacaaccactttgtgacaacttt 113662  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 73
Target Start/End: Original strand, 36002 - 36032
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtga 73  Q
    |||||||||||||||||||||||||||||||    
T  36002 gagaaatgatatttgtacaactactttgtga 36032  T

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Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 36095 - 36186
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaaga--agttgtcatataaa-ttgtctcaaatgattgttcaaatattaatactctt 196  Q
    ||||||||| | ||||| |||||||||| ||||||||| |  |||||||| | ||| |||| ||||||| |||||||||||| | |||||||    
T  36095 ctctccattatttttgaccaatgaaaagagagaaaaaaaacaagttgtcacaaaaagttgtatcaaatggttgttcaaatatcactactctt 36186  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 190860 - 190782
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgtctcaaatgattgttcaaatat 186  Q
    ||||||||||| ||||| |||| |||| ||||||||||||| || ||| | ||||||| |||||| | | |||||||||    
T  190860 ctctccattgtttttgaccaataaaaaatgagaaaaaagaaattatcacaaaaattgtttcaaataaatattcaaatat 190782  T

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Target: scaffold0662 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 1078 - 1115
Alignment:
Q  43 gagaaatgatatttgtacaactactttgtgacgacttt 80  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  1078 gagaaatgatatttgtacaactattttgtgacaacttt 1115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 31575 - 31518
Alignment:
Q  108 ctctccattgtatttgatcaatgaaaagtgagaaaaaagaagttgtcatataaattgt 165  Q
    ||||||||||| ||| | |||||||||| ||||||||| ||||||||| | |||||||    
T  31575 ctctccattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaaattgt 31518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 15604 - 15568
Alignment:
Q  44 agaaatgatatttgtacaactactttgtgacgacttt 80  Q
    |||||||||||||||||||| |||||||||| |||||    
T  15604 agaaatgatatttgtacaaccactttgtgacaacttt 15568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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