View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9036_low_4 (Length: 648)

Name: NF9036_low_4
Description: NF9036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9036_low_4
NF9036_low_4
[»] chr6 (55 HSPs)
chr6 (295-648)||(16838979-16839331)
chr6 (295-648)||(6005652-6006007)
chr6 (295-648)||(33329932-33330295)
chr6 (295-648)||(33335429-33335792)
chr6 (302-648)||(5343712-5344058)
chr6 (301-647)||(6438733-6439078)
chr6 (355-647)||(28155130-28155422)
chr6 (303-572)||(14741933-14742202)
chr6 (404-572)||(14737174-14737342)
chr6 (303-572)||(22010196-22010465)
chr6 (303-572)||(11857292-11857560)
chr6 (295-572)||(5674229-5674505)
chr6 (303-463)||(30125025-30125185)
chr6 (303-480)||(6136363-6136540)
chr6 (404-481)||(5266487-5266564)
chr6 (292-480)||(22709460-22709648)
chr6 (303-536)||(16578861-16579094)
chr6 (303-536)||(16616286-16616519)
chr6 (308-480)||(34166678-34166851)
chr6 (404-572)||(3073066-3073234)
chr6 (404-480)||(13150957-13151034)
chr6 (404-534)||(33342449-33342580)
chr6 (404-534)||(6026942-6027072)
chr6 (404-535)||(411794-411927)
chr6 (404-480)||(34164552-34164629)
chr6 (404-460)||(2171939-2171995)
chr6 (302-353)||(5016975-5017026)
chr6 (295-370)||(23896882-23896957)
chr6 (295-353)||(24714938-24714997)
chr6 (302-353)||(31085952-31086003)
chr6 (303-353)||(5266596-5266646)
chr6 (303-353)||(14737092-14737142)
chr6 (303-536)||(16554461-16554694)
chr6 (303-536)||(16631017-16631250)
chr6 (404-480)||(25420905-25420981)
chr6 (308-480)||(27647480-27647652)
chr6 (295-370)||(6097911-6097986)
chr6 (404-480)||(25421000-25421075)
chr6 (302-353)||(18234650-18234701)
chr6 (500-535)||(22709499-22709534)
chr6 (500-534)||(2171959-2171993)
chr6 (308-370)||(13150861-13150923)
chr6 (302-336)||(28155096-28155130)
chr6 (303-353)||(33342631-33342681)
chr6 (303-352)||(6026841-6026890)
chr6 (295-370)||(2172029-2172104)
chr6 (295-370)||(3073268-3073343)
chr6 (404-460)||(5757060-5757116)
chr6 (496-536)||(16652898-16652937)
chr6 (404-460)||(23896792-23896848)
chr6 (338-370)||(24399579-24399611)
chr6 (338-370)||(24409699-24409731)
chr6 (295-366)||(26253589-26253660)
chr6 (308-352)||(34151840-34151884)
chr6 (308-352)||(34164456-34164500)
[»] chr5 (54 HSPs)
chr5 (295-648)||(33791551-33791904)
chr5 (295-648)||(2785610-2785963)
chr5 (295-648)||(33768419-33768772)
chr5 (290-648)||(31396484-31396841)
chr5 (295-648)||(31401346-31401698)
chr5 (302-648)||(28807082-28807427)
chr5 (304-648)||(37560955-37561298)
chr5 (304-648)||(37556133-37556476)
chr5 (303-572)||(15045004-15045272)
chr5 (303-572)||(1456645-1456914)
chr5 (303-572)||(27450134-27450402)
chr5 (303-571)||(43599043-43599311)
chr5 (303-571)||(43604535-43604803)
chr5 (303-571)||(43610027-43610295)
chr5 (303-572)||(27445291-27445559)
chr5 (303-489)||(30631755-30631941)
chr5 (404-572)||(31180573-31180741)
chr5 (404-572)||(43592597-43592764)
chr5 (303-534)||(16546223-16546454)
chr5 (295-572)||(24136208-24136484)
chr5 (303-534)||(40379685-40379916)
chr5 (303-534)||(16544001-16544232)
chr5 (303-474)||(29402557-29402728)
chr5 (303-534)||(40381896-40382127)
chr5 (308-534)||(25077718-25077944)
chr5 (308-534)||(25135687-25135913)
chr5 (295-569)||(26177466-26177740)
chr5 (425-572)||(29751468-29751615)
chr5 (303-572)||(10592851-10593118)
chr5 (295-353)||(14520796-14520854)
chr5 (290-480)||(16407636-16407826)
chr5 (303-480)||(22536668-22536845)
chr5 (404-480)||(38219845-38219921)
chr5 (295-480)||(9789624-9789809)
chr5 (295-480)||(16409077-16409262)
chr5 (295-480)||(18442048-18442233)
chr5 (404-489)||(29720074-29720161)
chr5 (293-370)||(9352805-9352882)
chr5 (304-572)||(26170366-26170634)
chr5 (303-353)||(31180773-31180823)
chr5 (425-572)||(35388022-35388169)
chr5 (303-353)||(43592797-43592847)
chr5 (307-370)||(36931855-36931918)
chr5 (295-370)||(15465050-15465125)
chr5 (303-353)||(12083658-12083708)
chr5 (304-353)||(11916453-11916502)
chr5 (294-370)||(29719964-29720040)
chr5 (295-370)||(29722152-29722227)
chr5 (295-370)||(29752315-29752390)
chr5 (404-474)||(29722261-29722332)
chr5 (332-370)||(25412396-25412434)
chr5 (295-344)||(35388197-35388246)
chr5 (303-336)||(43625608-43625641)
chr5 (404-460)||(9352916-9352972)
[»] chr8 (38 HSPs)
chr8 (288-648)||(35745626-35745986)
chr8 (301-647)||(39784330-39784675)
chr8 (303-572)||(10683746-10684015)
chr8 (303-572)||(25327671-25327940)
chr8 (303-572)||(4759541-4759809)
chr8 (303-572)||(6311659-6311928)
chr8 (303-572)||(18852634-18852902)
chr8 (303-571)||(30656008-30656275)
chr8 (404-572)||(7289536-7289704)
chr8 (303-572)||(18870028-18870296)
chr8 (303-571)||(36979741-36980007)
chr8 (404-572)||(10688707-10688875)
chr8 (303-481)||(33037294-33037472)
chr8 (295-572)||(1261414-1261692)
chr8 (303-480)||(3439095-3439271)
chr8 (303-534)||(42575670-42575902)
chr8 (294-480)||(2627317-2627503)
chr8 (295-370)||(7412877-7412952)
chr8 (303-479)||(15290150-15290327)
chr8 (303-479)||(15470519-15470696)
chr8 (302-353)||(5701958-5702009)
chr8 (295-480)||(26288332-26288517)
chr8 (295-480)||(26301589-26301774)
chr8 (295-480)||(26313583-26313768)
chr8 (581-648)||(10684047-10684114)
chr8 (401-480)||(25689646-25689725)
chr8 (303-353)||(10688625-10688675)
chr8 (304-353)||(4456575-4456624)
chr8 (304-353)||(19175233-19175282)
chr8 (303-370)||(7289434-7289501)
chr8 (303-353)||(25689568-25689618)
chr8 (295-370)||(31042908-31042983)
chr8 (405-440)||(1746665-1746700)
chr8 (302-353)||(23799098-23799149)
chr8 (405-440)||(34256951-34256986)
chr8 (500-534)||(33037397-33037431)
chr8 (595-647)||(25327952-25328004)
chr8 (599-647)||(25328082-25328130)
[»] chr2 (32 HSPs)
chr2 (295-648)||(19344657-19345010)
chr2 (295-648)||(19349515-19349868)
chr2 (303-572)||(39811484-39811753)
chr2 (303-647)||(32247021-32247345)
chr2 (303-572)||(14291850-14292118)
chr2 (303-572)||(9295869-9296137)
chr2 (303-572)||(11098394-11098662)
chr2 (304-480)||(25410081-25410257)
chr2 (308-572)||(4484646-4484910)
chr2 (303-534)||(12647729-12647960)
chr2 (295-460)||(3492212-3492377)
chr2 (295-572)||(32289148-32289425)
chr2 (295-460)||(30832921-30833086)
chr2 (297-353)||(36757419-36757475)
chr2 (303-370)||(44310478-44310545)
chr2 (303-353)||(8389631-8389681)
chr2 (295-353)||(28258669-28258727)
chr2 (302-353)||(33528104-33528155)
chr2 (303-353)||(10706733-10706783)
chr2 (302-344)||(20522797-20522839)
chr2 (303-353)||(21630511-21630561)
chr2 (303-353)||(39483443-39483493)
chr2 (295-370)||(40739382-40739457)
chr2 (303-353)||(23077952-23078002)
chr2 (404-480)||(6266383-6266459)
chr2 (500-535)||(25410120-25410155)
chr2 (500-535)||(30833032-30833067)
chr2 (500-534)||(3492232-3492266)
chr2 (405-454)||(34389316-34389365)
chr2 (303-335)||(13569914-13569946)
chr2 (404-460)||(28258759-28258815)
chr2 (330-370)||(29867491-29867531)
[»] scaffold0197 (3 HSPs)
scaffold0197 (295-648)||(18663-19015)
scaffold0197 (302-572)||(13790-14060)
scaffold0197 (581-648)||(14092-14159)
[»] chr3 (83 HSPs)
chr3 (295-648)||(2672418-2672781)
chr3 (295-648)||(2676574-2676937)
chr3 (295-648)||(32475719-32476072)
chr3 (295-648)||(32480577-32480930)
chr3 (302-648)||(24968342-24968698)
chr3 (302-572)||(8512551-8512821)
chr3 (302-572)||(8517431-8517701)
chr3 (303-647)||(18656667-18657022)
chr3 (303-535)||(22172669-22172900)
chr3 (303-572)||(28503326-28503595)
chr3 (303-572)||(40372263-40372531)
chr3 (303-572)||(28501159-28501428)
chr3 (303-572)||(7167607-7167875)
chr3 (303-571)||(8477729-8477995)
chr3 (404-572)||(8738631-8738798)
chr3 (404-572)||(9090869-9091036)
chr3 (404-572)||(27352189-27352356)
chr3 (404-489)||(2671173-2671259)
chr3 (308-534)||(10055817-10056044)
chr3 (308-534)||(10066927-10067154)
chr3 (303-534)||(4598868-4599100)
chr3 (303-534)||(4601089-4601321)
chr3 (308-480)||(10058039-10058212)
chr3 (308-480)||(10060261-10060434)
chr3 (308-480)||(10062483-10062656)
chr3 (308-480)||(10064705-10064878)
chr3 (292-353)||(27974430-27974491)
chr3 (303-480)||(6716092-6716269)
chr3 (303-480)||(54634717-54634894)
chr3 (295-353)||(21711768-21711826)
chr3 (295-353)||(39032017-39032075)
chr3 (404-460)||(1306439-1306495)
chr3 (401-480)||(6718374-6718453)
chr3 (404-534)||(25637121-25637251)
chr3 (295-370)||(37726224-37726299)
chr3 (295-353)||(27027273-27027331)
chr3 (295-353)||(27038608-27038666)
chr3 (303-353)||(30709266-30709316)
chr3 (303-353)||(36029659-36029709)
chr3 (303-534)||(10210985-10211217)
chr3 (295-370)||(23200654-23200729)
chr3 (295-370)||(26928080-26928155)
chr3 (295-370)||(37408036-37408111)
chr3 (581-648)||(8512452-8512519)
chr3 (581-648)||(8517332-8517399)
chr3 (295-370)||(23198455-23198530)
chr3 (401-480)||(45282671-45282750)
chr3 (302-344)||(1730915-1730957)
chr3 (303-480)||(10208785-10208963)
chr3 (303-353)||(16264896-16264946)
chr3 (308-353)||(40734087-40734132)
chr3 (404-480)||(800794-800870)
chr3 (303-534)||(3617041-3617272)
chr3 (294-460)||(33386136-33386302)
chr3 (302-353)||(40592251-40592302)
chr3 (303-353)||(8738549-8738599)
chr3 (303-353)||(9090787-9090837)
chr3 (295-353)||(32143870-32143928)
chr3 (303-353)||(35926057-35926106)
chr3 (303-353)||(48438782-48438832)
chr3 (519-572)||(2671268-2671321)
chr3 (295-370)||(1306529-1306604)
chr3 (295-370)||(7782637-7782712)
chr3 (309-353)||(27985971-27986015)
chr3 (404-460)||(32143782-32143838)
chr3 (405-440)||(3393293-3393328)
chr3 (405-440)||(5258591-5258626)
chr3 (303-353)||(24694655-24694706)
chr3 (500-534)||(1306459-1306493)
chr3 (303-353)||(6718295-6718345)
chr3 (425-572)||(7782456-7782603)
chr3 (332-370)||(9634818-9634856)
chr3 (303-353)||(16498644-16498694)
chr3 (293-370)||(27453506-27453583)
chr3 (303-353)||(45282592-45282642)
chr3 (308-353)||(40735018-40735063)
chr3 (303-344)||(47923327-47923368)
chr3 (404-480)||(23198345-23198421)
chr3 (404-480)||(23200544-23200620)
chr3 (303-370)||(25637020-25637087)
chr3 (404-460)||(26928189-26928245)
chr3 (404-460)||(27986047-27986103)
chr3 (404-460)||(37726134-37726190)
[»] chr1 (37 HSPs)
chr1 (8-294)||(41655843-41656132)
chr1 (290-648)||(43987943-43988312)
chr1 (302-647)||(25439405-25439748)
chr1 (301-647)||(1054519-1054864)
chr1 (301-647)||(44023382-44023726)
chr1 (302-647)||(25444598-25444941)
chr1 (301-647)||(39445732-39446077)
chr1 (304-572)||(41390910-41391177)
chr1 (357-572)||(41398565-41398779)
chr1 (404-572)||(24786933-24787100)
chr1 (404-571)||(24793755-24793921)
chr1 (303-534)||(44203225-44203456)
chr1 (404-572)||(20622544-20622712)
chr1 (404-572)||(9986894-9987062)
chr1 (293-353)||(37070334-37070394)
chr1 (295-481)||(51764990-51765176)
chr1 (295-460)||(19360912-19361077)
chr1 (292-458)||(19365765-19365931)
chr1 (302-353)||(13598967-13599018)
chr1 (295-370)||(26644373-26644448)
chr1 (303-572)||(9036010-9036277)
chr1 (295-353)||(21536112-21536170)
chr1 (404-535)||(21053648-21053781)
chr1 (404-535)||(40282067-40282200)
chr1 (295-370)||(24202251-24202326)
chr1 (295-353)||(3282273-3282331)
chr1 (303-353)||(24793673-24793723)
chr1 (295-352)||(13604095-13604152)
chr1 (425-534)||(24202360-24202470)
chr1 (295-370)||(20622746-20622821)
chr1 (303-370)||(21053547-21053614)
chr1 (302-353)||(16124187-16124238)
chr1 (500-535)||(19361023-19361058)
chr1 (500-535)||(19365879-19365914)
chr1 (405-440)||(20762358-20762393)
chr1 (303-353)||(13659840-13659890)
chr1 (404-460)||(13604204-13604260)
[»] scaffold0464 (1 HSPs)
scaffold0464 (301-647)||(595-940)
[»] scaffold0259 (1 HSPs)
scaffold0259 (302-572)||(1745-2015)
[»] scaffold0028 (1 HSPs)
scaffold0028 (302-572)||(148450-148720)
[»] chr7 (48 HSPs)
chr7 (302-648)||(16880308-16880654)
chr7 (302-641)||(16885170-16885509)
chr7 (302-648)||(24260827-24261173)
chr7 (304-648)||(21811747-21812090)
chr7 (302-572)||(24265683-24265953)
chr7 (301-572)||(31109075-31109347)
chr7 (404-572)||(24023927-24024093)
chr7 (303-558)||(12406595-12406850)
chr7 (303-572)||(4873445-4873714)
chr7 (303-572)||(2058330-2058597)
chr7 (416-572)||(12397229-12397385)
chr7 (303-481)||(21640238-21640416)
chr7 (294-572)||(24789425-24789702)
chr7 (303-534)||(18392542-18392773)
chr7 (303-482)||(20357035-20357214)
chr7 (291-572)||(21646366-21646647)
chr7 (404-570)||(1533012-1533177)
chr7 (293-480)||(39730931-39731118)
chr7 (303-534)||(6592683-6592914)
chr7 (295-370)||(21983792-21983867)
chr7 (295-480)||(48408398-48408583)
chr7 (303-480)||(20343507-20343684)
chr7 (303-534)||(6594899-6595130)
chr7 (404-480)||(18414090-18414166)
chr7 (294-480)||(43504536-43504722)
chr7 (295-370)||(47264192-47264267)
chr7 (303-480)||(32060704-32060881)
chr7 (294-370)||(2479885-2479961)
chr7 (404-480)||(18409214-18409290)
chr7 (295-370)||(21989456-21989531)
chr7 (295-370)||(44847619-44847694)
chr7 (401-534)||(18389106-18389239)
chr7 (293-353)||(79955-80015)
chr7 (404-480)||(1562403-1562479)
chr7 (404-480)||(25767361-25767437)
chr7 (295-369)||(1532884-1532958)
chr7 (303-370)||(12397418-12397485)
chr7 (597-648)||(19992546-19992597)
chr7 (581-648)||(24265985-24266052)
chr7 (303-370)||(1562513-1562580)
chr7 (307-352)||(24023830-24023875)
chr7 (295-370)||(18409324-18409399)
chr7 (295-370)||(18414200-18414275)
chr7 (302-353)||(46515808-46515860)
chr7 (405-440)||(4178461-4178496)
chr7 (500-534)||(21640279-21640313)
chr7 (303-352)||(18390506-18390555)
chr7 (309-353)||(49092238-49092282)
[»] chr4 (42 HSPs)
chr4 (300-647)||(45347321-45347668)
chr4 (301-645)||(18855961-18856304)
chr4 (303-647)||(5732897-5733240)
chr4 (359-647)||(45356861-45357148)
chr4 (303-647)||(3814256-3814598)
chr4 (303-572)||(9228693-9228962)
chr4 (303-568)||(9223906-9224171)
chr4 (303-572)||(56141518-56141788)
chr4 (404-572)||(18712363-18712531)
chr4 (303-572)||(24742302-24742570)
chr4 (303-572)||(51520775-51521043)
chr4 (301-411)||(18860406-18860516)
chr4 (404-481)||(29761073-29761150)
chr4 (294-480)||(28467976-28468162)
chr4 (308-534)||(7122279-7122505)
chr4 (295-572)||(13992602-13992879)
chr4 (295-359)||(5143803-5143867)
chr4 (308-480)||(7124501-7124673)
chr4 (303-572)||(8392989-8393256)
chr4 (297-353)||(8689038-8689094)
chr4 (295-353)||(5148244-5148302)
chr4 (303-572)||(8395198-8395465)
chr4 (295-480)||(31495717-31495902)
chr4 (295-353)||(6742888-6742946)
chr4 (303-353)||(16628353-16628403)
chr4 (303-353)||(38151918-38151968)
chr4 (303-352)||(3778116-3778165)
chr4 (302-353)||(5268698-5268749)
chr4 (294-353)||(16622765-16622824)
chr4 (303-480)||(5135656-5135834)
chr4 (303-480)||(5137882-5138060)
chr4 (295-353)||(5396164-5396221)
chr4 (303-353)||(10047932-10047982)
chr4 (302-353)||(54867745-54867796)
chr4 (307-353)||(29761182-29761228)
chr4 (295-353)||(36314703-36314761)
chr4 (295-353)||(36328912-36328970)
chr4 (295-370)||(31985127-31985202)
chr4 (405-440)||(5370522-5370557)
chr4 (303-353)||(9194164-9194215)
chr4 (404-454)||(8689078-8689128)
chr4 (519-572)||(29761002-29761055)
[»] scaffold0009 (2 HSPs)
scaffold0009 (303-572)||(176457-176726)
scaffold0009 (581-648)||(176760-176827)
[»] scaffold0355 (1 HSPs)
scaffold0355 (303-572)||(3344-3613)
[»] scaffold0135 (2 HSPs)
scaffold0135 (404-568)||(34662-34826)
scaffold0135 (303-367)||(34561-34625)
[»] scaffold0665 (2 HSPs)
scaffold0665 (404-497)||(8091-8184)
scaffold0665 (303-353)||(8216-8266)
[»] scaffold0286 (2 HSPs)
scaffold0286 (295-480)||(21939-22124)
scaffold0286 (500-534)||(22050-22084)
[»] scaffold0674 (1 HSPs)
scaffold0674 (303-480)||(4126-4303)
[»] scaffold0188 (1 HSPs)
scaffold0188 (295-480)||(17431-17616)
[»] scaffold0137 (1 HSPs)
scaffold0137 (303-534)||(5866-6098)
[»] scaffold0565 (1 HSPs)
scaffold0565 (303-534)||(2947-3178)
[»] scaffold1455 (1 HSPs)
scaffold1455 (301-370)||(1714-1783)
[»] scaffold0491 (2 HSPs)
scaffold0491 (295-572)||(11477-11753)
scaffold0491 (295-480)||(9124-9308)
[»] scaffold0006 (5 HSPs)
scaffold0006 (302-353)||(6252-6303)
scaffold0006 (302-353)||(3060-3111)
scaffold0006 (295-352)||(132752-132809)
scaffold0006 (303-353)||(149601-149651)
scaffold0006 (404-460)||(132861-132917)
[»] scaffold0087 (2 HSPs)
scaffold0087 (295-341)||(36324-36370)
scaffold0087 (295-370)||(43434-43509)
[»] scaffold0140 (1 HSPs)
scaffold0140 (290-370)||(7906-7986)
[»] scaffold0510 (2 HSPs)
scaffold0510 (295-370)||(1083-1158)
scaffold0510 (404-460)||(1192-1248)
[»] scaffold0098 (1 HSPs)
scaffold0098 (295-353)||(45746-45804)
[»] scaffold0036 (1 HSPs)
scaffold0036 (303-353)||(86153-86204)
[»] scaffold0002 (1 HSPs)
scaffold0002 (405-440)||(434218-434253)
[»] scaffold1519 (1 HSPs)
scaffold1519 (404-440)||(591-627)


Alignment Details
Target: chr6 (Bit Score: 293; Significance: 1e-164; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 16839331 - 16838979
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||    
T  16839331 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 16839232  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16839231 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttgggaccgt 16839132  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       | ||| |||||||||    
T  16839131 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttttttgg-agagaaccttgag 16839033  T
Q  595 agagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16839032 agagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 16838979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 6006007 - 6005652
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || |||| |||| |||    
T  6006007 tgttgaaaattggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccatgagccaagtttg 6005908  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  6005907 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 6005808  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc-nnnnnnngaagacaaccttga 593  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||        ||| | |||||| |    
T  6005807 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgctttttttggaaaaaaaccttaa 6005708  T
Q  594 gagagcttaagagagaaaacttggagatcaaagat-gggatcctttggggtgtgtt 648  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6005707 gagagcttaagagagaaaacttggagatcaaagatggggatcctttggggtgtgtt 6005652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 295 - 648
Target Start/End: Original strand, 33329932 - 33330295
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||    
T  33329932 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 33330031  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33330032 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 33330131  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc----------nnnnnnngaaga 584  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||                  ||||    
T  33330132 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagacaaccttaaga 33330231  T
Q  585 caaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33330232 caaccttgagagaacttaagagagaaaacttggagatcaaagaggggatcctttggggtgtgtt 33330295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 295 - 648
Target Start/End: Original strand, 33335429 - 33335792
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| |||| |||    
T  33335429 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 33335528  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33335529 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 33335628  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc----------nnnnnnngaaga 584  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||                  ||||    
T  33335629 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcatgtgcttttttgaagacaaccttaaga 33335728  T
Q  585 caaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33335729 caaccttgagagaacttaagagagaaaacttggagatcaaagaggggatcctttggggtgtgtt 33335792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 302 - 648
Target Start/End: Complemental strand, 5344058 - 5343712
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||||||||||| | ||    ||||| ||||  | ||  |||    
T  5344058 aattggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgatcagggaggaagtgagccaagtcttctgaaag 5343959  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||    
T  5343958 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcatat 5343859  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||        | |  |||||||||||| |||    
T  5343858 cgtgacacgatctagggaaatcgtggcacgatttcttcagggctggactagtatataaagtgttcttgtgctcatttgaaggttaaccttgagagaactt 5343759  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  5343758 aagagagaaaacttggatatcaaagatgggatcctttggggtgtgtt 5343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 301 - 647
Target Start/End: Complemental strand, 6439078 - 6438733
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaa 400  Q
    ||||||||||||||||| |||| |||||||||| || ||||||| |||||||| | |||||||||||||| |||| | ||||||| |||| ||||| ||     
T  6439078 aaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 6438979  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||  ||||||||||    
T  6438978 gcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaacctgggaaccgttgcaga 6438879  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagct 600  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||       |||||||||||| ||||||||    
T  6438878 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggaaggactagtatatattgtgttcttgtgc-ttttttgaagacaaccttaagagagct 6438780  T
Q  601 taagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  6438779 taagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 6438733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 355 - 647
Target Start/End: Original strand, 28155130 - 28155422
Alignment:
Q  355 gcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctgg 454  Q
    ||||||||||||||||| ||||| ||||||| |||| ||||  |  ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  28155130 gcaatcgtgacacgatctgagatgccgtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctgg 28155229  T
Q  455 ttaagtatctctgataaggactggtcaaccttggggccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagta 554  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28155230 ttaagtatctctgataaggactggtcaacctggggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagta 28155329  T
Q  555 tataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||  ||||||||||||        || | |||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  28155330 tatattgtgttcttgtgcttttttgaaaaaaaaccttaagagaacttaagagagaaaacttggagatcaaagaggggatcctatggggtgtgt 28155422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 14741933 - 14742202
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagatac-cgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |   |||||| | || ||||  || |    
T  14741933 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgag-ctagtttgcaggacg 14742031  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| |||||||||||    
T  14742032 ccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagat 14742131  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||| |||||||||| |||||||||||||||| | ||||||||||||  ||||||||||||    
T  14742132 cgtgacacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 14742202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 14737174 - 14737342
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  14737174 aaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagatcg 14737273  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||  ||||||||||||    
T  14737274 tgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 14737342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 22010196 - 22010465
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagata-ccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |  |||| ||  | | ||||  || |    
T  22010196 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagtta-gtttgcaggacg 22010294  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||| |||||||| ||    
T  22010295 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaat 22010394  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| |||||||||||||| |   ||||||||||||  ||||||||||||    
T  22010395 cgtgacacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgc 22010465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 11857560 - 11857292
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagata-ccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |  ||||||| | || ||||  || |    
T  11857560 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgag-ctagtttgcaggacg 11857462  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||| | |||||||||||| |||||||||||| |||||||| ||    
T  11857461 ccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtcaaccttgggtccgttgcaaat 11857362  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| | ||||||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  11857361 cgtgacacgat-ttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 11857292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 295 - 572
Target Start/End: Original strand, 5674229 - 5674505
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| || || ||||||| |||||||| |||   | ||| ||||||| |  | |    
T  5674229 tgttgatagttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggca-tcgtgacatgattttgtgatgccgtgag-ctggtt 5674326  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggc 491  Q
    |||  |  || |||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| |||||||| |    
T  5674327 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggac 5674426  T
Q  492 cgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
        ||| |||||||||||||||  ||||||||||||||||||   |||| | | | ||||||| ||||||||||||||||    
T  5674427 gtacgcaaatcgtgacacgatct--ggaaatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgc 5674505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 303 - 463
Target Start/End: Original strand, 30125025 - 30125185
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| | || ||||  || |    
T  30125025 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgag-ctagtttgcaggacg 30125123  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatc 463  Q
    | |||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  30125124 ccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 303 - 480
Target Start/End: Complemental strand, 6136540 - 6136363
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| | ||||| ||||||||    ||| |||||||  | | ||||  |        
T  6136540 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcggatgccgtgagctagggttgcaggggtg 6136441  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||| ||||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  6136440 aaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6136363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 404 - 481
Target Start/End: Complemental strand, 5266564 - 5266487
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 481  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||    
T  5266564 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtca 5266487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 480
Target Start/End: Complemental strand, 22709648 - 22709460
Alignment:
Q  292 atgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaa 389  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||| |||| || ||||| |||||||| |||||||||||   | ||| || |||| |      
T  22709648 atgtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaa-cgtgacacgattttgtgatgccatgag-ctg 22709551  T
Q  390 gcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    | ||||  |  || |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  22709550 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtc 22709460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 536
Target Start/End: Complemental strand, 16579094 - 16578861
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggagataccgtgagacaagcttgctagaa 400  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  ||| | | ||||||| | || ||||  |      
T  16579094 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgag-ctaggttgcagggt 16578997  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcag 499  Q
    ||||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    ||||||      ||||    
T  16578996 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcag 16578897  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatttc 536  Q
    ||||||||||||| | |||||||||||||||||||||    
T  16578896 atcgtgacacgat-ttgggaaatcgtgacacgatttc 16578861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 536
Target Start/End: Original strand, 16616286 - 16616519
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggagataccgtgagacaagcttgctagaa 400  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  ||| | | ||||||| | || ||||  |      
T  16616286 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgag-ctaggttgcagggt 16616383  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcag 499  Q
    ||||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    ||||||      ||||    
T  16616384 gcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcag 16616483  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatttc 536  Q
    ||||||||||||| | |||||||||||||||||||||    
T  16616484 atcgtgacacgat-ttgggaaatcgtgacacgatttc 16616519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 34166678 - 34166851
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |     ||||    
T  34166678 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 34166777  T
Q  408 cgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  34166778 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34166851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 404 - 572
Target Start/End: Complemental strand, 3073234 - 3073066
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgca--ga 500  Q
    |||||||||||||||  | ||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||| ||||||||   | ||||   |    
T  3073234 aaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggatggatgcactaa 3073135  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||| |||||||||  |||||||||||||||||||  |||| | ||| ||||||| | ||||||||||||||    
T  3073134 tcgttacacgatct--ggaaatcgtgacacgattttatcagtggagggctagtat-ttaagtgttcttgtgc 3073066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 13150957 - 13151034
Alignment:
Q  404 aaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  13150957 aaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 13151034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 534
Target Start/End: Complemental strand, 33342580 - 33342449
Alignment:
Q  404 aaatcgtgacacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
    |||||||| |||||| | |||||||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  33342580 aaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 33342481  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  33342480 cgtgacacgat-tgggcaaatcgtgacacgatt 33342449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 534
Target Start/End: Original strand, 6026942 - 6027072
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatc 502  Q
    |||||||| |||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||| ||||   ||||||| | |  ||| |||    
T  6026942 aaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaatc 6027041  T
Q  503 gtgacacgatctagggaaatcgtgacacgatt 534  Q
    |||||||||| | || ||||||||||||||||    
T  6027042 gtgacacgat-tgggaaaatcgtgacacgatt 6027072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 411794 - 411927
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgca--g 499  Q
    |||||||||||||||  ||||||||||||||||||||  | ||||||||| ||||||| ||  |||||||||||||||| |||||||| | | ||||       
T  411794 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgcacca 411893  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgattt 535  Q
    |||||||||| |||   |||||||||||||||||||    
T  411894 atcgtgacacaatc--aggaaatcgtgacacgattt 411927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 34164552 - 34164629
Alignment:
Q  404 aaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  34164552 aaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34164629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 2171995 - 2171939
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||| |||||||    
T  2171995 aaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagt 2171939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 5016975 - 5017026
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  5016975 aattggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 23896957 - 23896882
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||| ||| |||||||||||||||||| |||||||||  ||||||| |||||||| |  |||||||||||||    
T  23896957 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgat 23896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 24714997 - 24714938
Alignment:
Q  295 tgttgaaaattggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||    
T  24714997 tgttgaaaattggcttcaaattttgtggtttggaaaaacagagaaatcgtgacacgattt 24714938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 31085952 - 31086003
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  31085952 aattggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 5266646 - 5266596
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  5266646 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 14737092 - 14737142
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  14737092 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 536
Target Start/End: Original strand, 16554461 - 16554694
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggagataccgtgagacaagcttgctagaa 400  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| || ||||| |  |||||||||||||  ||| | | ||||||| | || || |  |      
T  16554461 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgggg-tgccgtgag-ctaggttacagggt 16554558  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcag 499  Q
    ||||||| ||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    ||||||      ||||    
T  16554559 gcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcag 16554658  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatttc 536  Q
    ||||||||||||| | |||||||||||||||||||||    
T  16554659 atcgtgacacgat-ttgggaaatcgtgacacgatttc 16554694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 303 - 536
Target Start/End: Original strand, 16631017 - 16631250
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggagataccgtgagacaagcttgctagaa 400  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| || ||||| |  |||||||||||||  ||| | | ||||||| | || || |  |      
T  16631017 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcgggg-tgccgtgag-ctaggttacagggt 16631114  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcag 499  Q
    ||||||| ||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    ||||||      ||||    
T  16631115 gcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcag 16631214  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatttc 536  Q
    ||||||||||||| | |||||||||||||||||||||    
T  16631215 atcgtgacacgat-ttgggaaatcgtgacacgatttc 16631250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 25420905 - 25420981
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  25420905 aaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25420981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 27647480 - 27647652
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt-tggcaatcgtgacacga--tcggagataccgtgagacaagcttgctagaagcaa 404  Q
    ||||||||||||||| ||||||||||| | ||||||| ||||||| |||| ||||||||||||  |||| | | ||||||| | || ||||  |  ||||    
T  27647480 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggc-atcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggtgcaa 27647576  T
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||| ||||||  || ||||||||||||||||   |||||||||| ||||||||||  |||||  ||||||||    
T  27647577 aatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtc 27647652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 6097986 - 6097911
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | ||| ||||||||||||||||||||||||||| | |||| || ||||| ||||||| ||||||||||||    
T  6097986 tgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggca-tcgtgacacgat 6097911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 25421000 - 25421075
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| ||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  25421000 aaatcgtgacatgat-tgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25421075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 18234701 - 18234650
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||| ||||||||||||||||||||||||| |||  || ||||||||    
T  18234701 aattggctttaaatttgtggtttggaagaacagagaaatgttgacacgattt 18234650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 535
Target Start/End: Complemental strand, 22709534 - 22709499
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgattt 535  Q
    ||||||||||||||| ||||||||||||||||||||    
T  22709534 atcgtgacacgatcttgggaaatcgtgacacgattt 22709499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 534
Target Start/End: Complemental strand, 2171993 - 2171959
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||||||| |||||||||||||||||||    
T  2171993 atcgtgacacgatcttgggaaatcgtgacacgatt 2171959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 370
Target Start/End: Original strand, 13150861 - 13150923
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||||||||| |||||||||||| | ||||||| |||||||| |  |||||||| ||||    
T  13150861 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgat 13150923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 302 - 336
Target Start/End: Original strand, 28155096 - 28155130
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagag 336  Q
    ||||||||||||||||||||| |||||||||||||    
T  28155096 aattggcttcaaatttgtggtctggaagaacagag 28155130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 33342681 - 33342631
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||| ||||||||||||||||||||||||||  | ||||||| ||||||||    
T  33342681 attgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattt 33342631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 6026841 - 6026890
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt 352  Q
    |||| |||||||||||||||||||||||| || | ||||||| |||||||    
T  6026841 attgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgatt 6026890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 2172104 - 2172029
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||||| | |||| |||||||||||||| ||||||||||||| ||||| | || | ||||||| |||||||||||||    
T  2172104 tgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggc-atcgtgacacgat 2172029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 3073343 - 3073268
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | ||| ||||||||||||||| |||||||||||   ||||||| ||||| ||||||| ||||||||||||    
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggca-tcgtgacacgat 3073268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 5757060 - 5757116
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||||||  ||||| ||| |||||||||||||||||   |||||||||||||||||    
T  5757060 aaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 536
Target Start/End: Original strand, 16652898 - 16652937
Alignment:
Q  496 gcagatcgtgacacgatctagggaaatcgtgacacgatttc 536  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  16652898 gcagatcgtgacacgattt-gggaaatcgtgacacgatttc 16652937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 23896848 - 23896792
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||||||  ||||| ||| |||||||||||||||||   |||||||||||||||||    
T  23896848 aaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 24399611 - 24399579
Alignment:
Q  338 aatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    ||||||||||||||||||| |||||||||||||    
T  24399611 aatcgtgtcacgatttggccatcgtgacacgat 24399579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 370
Target Start/End: Complemental strand, 24409731 - 24409699
Alignment:
Q  338 aatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    ||||||||||||||||||| |||||||||||||    
T  24409731 aatcgtgtcacgatttggccatcgtgacacgat 24409699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 366
Target Start/End: Original strand, 26253589 - 26253660
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgaca 366  Q
    |||||| | ||| ||||||||||||||| || |||||||||| ||||||| |||| ||||||| |||||||||    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgaca 26253660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 34151840 - 34151884
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt 352  Q
    |||||||||||||| |||||||||||| | ||||||| |||||||    
T  34151840 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 34151884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 34164456 - 34164500
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt 352  Q
    |||||||||||||| |||||||||||| | ||||||| |||||||    
T  34164456 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 34164500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 270; Significance: 1e-150; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 33791904 - 33791551
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||    
T  33791904 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 33791805  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33791804 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 33791705  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||       | ||| |||||| ||    
T  33791704 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-agataaccttaag 33791606  T
Q  595 agagcttaagagagaaaacttggagatcaaagat-gggatcctttggggtgtgtt 648  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33791605 agagcttaagagagaaaacttggagatcaaagatggggatcctttggggtgtgtt 33791551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 2785963 - 2785610
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||    
T  2785963 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 2785864  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||    
T  2785863 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggagcgt 2785764  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||       | ||| |||||| ||    
T  2785763 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-agataaccttaag 2785665  T
Q  595 agagcttaagagagaaaacttggagatcaaagat-gggatcctttggggtgtgtt 648  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2785664 agagcttaagagagaaaacttggagatcaaagatggggatcctttggggtgtgtt 2785610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 33768772 - 33768419
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||    
T  33768772 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 33768673  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33768672 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 33768573  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||       | ||| |||||| ||    
T  33768572 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcatgactagtatttaaagtgttcttgtgcttttttgg-agataaccttaag 33768474  T
Q  595 agagcttaagagagaaaacttggagatcaaagat-gggatcctttggggtgtgtt 648  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33768473 agagcttaagagagaaaacttggagatcaaagatggggatcctttggggtgtgtt 33768419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 290 - 648
Target Start/End: Original strand, 31396484 - 31396841
Alignment:
Q  290 aaatgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaa 389  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||  ||    
T  31396484 aaatttgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagaggcagtgagctaa 31396583  T
Q  390 gcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggg 489  Q
    | ||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||| |||    
T  31396584 gtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagacacttgttggttaagtttctctgataaggactggtcaacctgggg 31396683  T
Q  490 gccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaacc 589  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||       ||||||||||    
T  31396684 accgttgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgc-ttttttgaagacaacc 31396782  T
Q  590 ttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31396783 ttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 31396841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 295 - 648
Target Start/End: Original strand, 31401346 - 31401698
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  | |||||  ||| |||    
T  31401346 tgttgaaaattggcttcaaatttgtggtttgggagaatagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagaggcagtgagctaagtttg 31401445  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||| ||| ||||    
T  31401446 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacatgattcagaaacttgctgcttaagtttctctgataaggactggtcaacctggggaccgt 31401545  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||       |||||||||||||||    
T  31401546 tgcagatcgtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgc-ttttttgaagacaaccttgag 31401644  T
Q  595 agagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31401645 agagcttaagagacaaaacttggagatcaaagatgggatcctttggggtgtgtt 31401698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 302 - 648
Target Start/End: Original strand, 28807082 - 28807427
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| |||| ||||  |  |    
T  28807082 aattggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatctgagatgccgtgagccaagtttgcagggtg 28807181  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  28807182 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaacctggggaccgttgcagat 28807281  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||   |||||||||||       ||||| |||||| |||||||||    
T  28807282 cgtgacacgatctagggaactcgtggcacgatttcttcagggcaggactagtatatattatgttcttgtgc-ttttttgaagagaaccttaagagagctt 28807380  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  28807381 aagagagaaaacttggagatcaaagaggggatcctttggggtgtgtt 28807427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 304 - 648
Target Start/End: Original strand, 37560955 - 37561298
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaag-cttgctagaagc 402  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||  ||||||||||||||| ||||| ||||||| ||||  ||| | || ||    
T  37560955 ttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgatctgagatgccgtgagccaagttttgatggaggc 37561054  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatc 502  Q
     |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  37561055 -aaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggttaacctggggaccgttgcagatc 37561153  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctta 602  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||       ||||| |||||| |||  |||||    
T  37561154 gtgacatgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc-ttttttgaagagaaccttaagatggctta 37561252  T
Q  603 agagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||    
T  37561253 agagagaaaacttggagatcaaagaggggatcctatggggtgtgtt 37561298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 304 - 648
Target Start/End: Original strand, 37556133 - 37556476
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaag-cttgctagaagc 402  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||| ||||||| ||||  ||| | || ||    
T  37556133 ttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatctgagatgccgtgagccaagttttgatggaggc 37556232  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatc 502  Q
     |||||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||   || ||||||||||||    
T  37556233 -aaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggttaaccagaggaccgttgcagatc 37556331  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctta 602  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||||  ||||||||||||       ||||| |||||| |||  |||||    
T  37556332 gtgacacgatctagggaaatcatggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc-ttttttgaagagaaccttaagatggctta 37556430  T
Q  603 agagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||    
T  37556431 agagagaaaacttggagatcaaagaggggatcctatggggtgtgtt 37556476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 15045272 - 15045004
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    ||||||||||||||||| |||||||||||||||| ||||||| |||||||| | ||||||||||||||  ||||| ||||||| || | ||||  || ||    
T  15045272 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagcca-gtttgcaggacgc 15045174  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatc 502  Q
     |||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  15045173 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggggtccgttgcagatc 15045074  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||||||||||||| |||||||||||||||| | ||||||||||||  ||||||||||||    
T  15045073 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 15045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 1456645 - 1456914
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   | |   ||||||| | || || |  || |    
T  1456645 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgag-ctagtttacaggacg 1456743  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||| | | |||| ||    
T  1456744 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtctaccttgggtcagatgcaaat 1456843  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||| ||| ||||||||||| ||||||||||| || | | ||||||||||||  ||||||||||||    
T  1456844 cgtgacacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgc 1456914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 27450402 - 27450134
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   | |   ||||||| | || ||||  || |    
T  27450402 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgag-ctagtttgcaggacg 27450304  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| | |  ||| ||    
T  27450303 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaat 27450204  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| | ||||||||||| ||||||| |||||| | | | ||||||||||  ||||||||||||    
T  27450203 cgtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 27450134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 303 - 571
Target Start/End: Complemental strand, 43599311 - 43599043
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga--gataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |   ||||||||||||   |  |   ||||||| | || ||||  ||     
T  43599311 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgag-ctagtttgcaggac 43599213  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| | |  ||| |    
T  43599212 gccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaa 43599113  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtg 571  Q
    |||||||||||| | ||||||||||||||||||| |||||| | | | ||||||||||  |||||||||||    
T  43599112 tcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 303 - 571
Target Start/End: Complemental strand, 43604803 - 43604535
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga--gataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |   ||||||||||||   |  |   ||||||| | || ||||  ||     
T  43604803 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgag-ctagtttgcaggac 43604705  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| | |  ||| |    
T  43604704 gccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaa 43604605  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtg 571  Q
    |||||||||||| | ||||||||||||||||||| |||||| | | | ||||||||||  |||||||||||    
T  43604604 tcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 303 - 571
Target Start/End: Complemental strand, 43610295 - 43610027
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga--gataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |   ||||||||||||   |  |   ||||||| | || ||||  ||     
T  43610295 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgag-ctagtttgcaggac 43610197  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| | |  ||| |    
T  43610196 gccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaa 43610097  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtg 571  Q
    |||||||||||| | ||||||||||||||||||| |||||| | | | ||||||||||  |||||||||||    
T  43610096 tcgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 27445559 - 27445291
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| | ||||||||||| ||||||| |||||||| |  |||||||||||||   | |   ||||||| | || ||||  || |    
T  27445559 attggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgag-ctagtttgcaggacg 27445461  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| | |  ||| ||    
T  27445460 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaat 27445361  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| | ||||||||||| ||||||| |||||| | | | ||||||||||  ||||||||||||    
T  27445360 cgtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 27445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 303 - 489
Target Start/End: Complemental strand, 30631941 - 30631755
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| || | ||||  || |    
T  30631941 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcca-gtttgcaggacg 30631843  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggg 489  Q
    | ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  30631842 ccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaatcttggg 30631755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 404 - 572
Target Start/End: Complemental strand, 31180741 - 31180573
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| || |||||||||| ||||||||||||||||||||||||| | |  ||| ||||    
T  31180741 aaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgttaagtatcactgataaggactggtcaaccttgggtcagacgcaaatcg 31180642  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||| ||||| ||||||||||| ||||||| |||||| | | ||||||||||||  ||||||||||||    
T  31180641 tgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 31180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 404 - 572
Target Start/End: Complemental strand, 43592764 - 43592597
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| | |  ||| ||||    
T  43592764 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatcg 43592665  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||| | ||||||||||||||||||| |||| | | | | ||||||||||  ||||||||||||    
T  43592664 tgacacgat-ttgggaaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgc 43592597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 16546223 - 16546454
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| | |||||||||||||| |||| | |||||||  | | ||||  |  ||    
T  16546223 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 16546322  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
    ||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  16546323 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 16546422  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  16546423 cgtgacacgat-tgggaaaatcgtgacacgatt 16546454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 295 - 572
Target Start/End: Complemental strand, 24136484 - 24136208
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | |||| |||||||||||||| |||||||||| || ||||||| ||||| ||||||| ||||||||| ||   | ||| ||||||| | || |    
T  24136484 tgttgatatttggtttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggca-tcgtgacacaatttcgtgatgccgtgag-ctagtt 24136387  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggc 491  Q
    |||  |  || |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||  |||||||||||||||| |||||||| |    
T  24136386 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggac 24136287  T
Q  492 cgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
        ||| |||||||||||||||  |||||||||| |||||||   |||| | |   ||||||||||||||||||||||||    
T  24136286 gtacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgc 24136208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 40379685 - 40379916
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| | |||||||||||||| |||| | |||||||  | | ||||  |  ||    
T  40379685 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 40379784  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
    ||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  40379785 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 40379884  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  40379885 cgtgacacgat-tgggaaaatcgtgacacgatt 40379916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 16544001 - 16544232
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| | |||||||||||||| |||| | | |||||  | | || |  |  ||    
T  16544001 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgctgtgagctagggttacagggtgc 16544100  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
    ||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  16544101 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 16544200  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  16544201 cgtgacacgat-tgggaaaatcgtgacacgatt 16544232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 303 - 474
Target Start/End: Original strand, 29402557 - 29402728
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagata-ccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||| ||||||   |  |  || |||| | || ||||  || |    
T  29402557 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgag-ctagtttgcaggacg 29402655  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 474  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  29402656 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 40381896 - 40382127
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| || |||||||| | ||||||| |||||||| | |||||||||||||| |||| | |||||||  | | ||||  |  ||    
T  40381896 attgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 40381995  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
    ||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  40381996 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 40382095  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  40382096 cgtgacacgat-tgggaaaatcgtgacacgatt 40382127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 308 - 534
Target Start/End: Original strand, 25077718 - 25077944
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagca-aaa 406  Q
    ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||| |||| |||| | |||||||  | | ||| |||  |   |||    
T  25077718 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagggttg-taggggtgcaaa 25077816  T
Q  407 tcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatcgtg 505  Q
    ||||| ||||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||||||    
T  25077817 tcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 25077916  T
Q  506 acacgatctagggaaatcgtgacacgatt 534  Q
    ||||||| | || ||||||||||||||||    
T  25077917 acacgat-tgggaaaatcgtgacacgatt 25077944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 308 - 534
Target Start/End: Original strand, 25135687 - 25135913
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagca-aaa 406  Q
    ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||| |||| |||| | |||||||  | | ||| |||  |   |||    
T  25135687 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagggttg-taggggtgcaaa 25135785  T
Q  407 tcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatcgtg 505  Q
    ||||| ||||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||||||    
T  25135786 tcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 25135885  T
Q  506 acacgatctagggaaatcgtgacacgatt 534  Q
    ||||||| | || ||||||||||||||||    
T  25135886 acacgat-tgggaaaatcgtgacacgatt 25135913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 295 - 569
Target Start/End: Original strand, 26177466 - 26177740
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  | |    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctggtt 26177563  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggc 491  Q
    |||  |  || |||||||||||||||| ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||  |||||||| |    
T  26177564 tgcagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggac 26177663  T
Q  492 cgttgca--gatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttg 569  Q
     |  |||   |||||||||||| ||  |||||||||||||||||||  |||| | ||| ||||||| | |||||||||||    
T  26177664 ggacgcaccaatcgtgacacgacct--ggaaatcgtgacacgattttatcagtggagggctagtat-ttaagtgttcttg 26177740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 425 - 572
Target Start/End: Complemental strand, 29751615 - 29751468
Alignment:
Q  425 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcagatcgtgacacgatctagggaaatc 523  Q
    ||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| ||||||||      ||| ||||||||||||| | || |||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgat-ttggaaaatc 29751517  T
Q  524 gtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| ||| || | | | ||||||||||||||||||||||||    
T  29751516 gtgacacgattgctttagaggaaggctagtatataaagtgttcttgtgc 29751468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 10592851 - 10593118
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    | | |||||||| | | ||||  |  ||    
T  10592851 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccgggtgccgtgagatagg-ttgcagggtgc 10592949  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
    ||||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    ||| ||      ||||||    
T  10592950 aaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtcgtttcttcggtggtacgcagat 10593049  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| | |||||||||||||||||||||  ||| | | ||||||||| | ||||||||||||||    
T  10593050 cgtgacacgat-ttgggaaatcgtgacacgatttcaacagaggaagactagtatgt-aagtgttcttgtgc 10593118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 14520854 - 14520796
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  14520854 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 480
Target Start/End: Original strand, 16407636 - 16407826
Alignment:
Q  290 aaatgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacga-tcggagataccgtgagaca 388  Q
    |||| |||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||| || |  |||||||||||| |  | ||| ||||||| |     
T  16407636 aaatctgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgag-ct 16407734  T
Q  389 agcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     | ||||  |  || ||||||||||||||||||| | |||||||||||||||   ||||||||| ||||||| ||  |||||||||| ||||    
T  16407735 ggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtc 16407826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 480
Target Start/End: Complemental strand, 22536845 - 22536668
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt-tggcaatcgtgacacgat--cggagataccgtgagacaagcttgctaga 399  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| ||||||| ||||| ||||||||||||  ||| | | ||||||| | || ||||  |     
T  22536845 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggca-tcgtgacacgatttcgggg-tgccgtgag-ctaggttgcaggg 22536749  T
Q  400 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     ||||||||||| ||| ||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  22536748 tgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 22536668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 38219921 - 38219845
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||||||||||||||||| |||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  38219921 aaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactggtc 38219845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 9789809 - 9789624
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  | |    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctggtt 9789712  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || |||||||||||||||  ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  9789711 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 9789624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 480
Target Start/End: Original strand, 16409077 - 16409262
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacga-tcggagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| || |||||||||| ||||||| |||| ||||||| |||||||||||| |  | |||  |||||| |  | |    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgtcgtgag-ctggtt 16409174  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||| ||  || |||| |||||||||||||| | |||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  16409175 tgcaaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 16409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 18442233 - 18442048
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcgga-gataccgtgagacaagct 392  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  | |    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcatgatgccgtgag-ctggtt 18442136  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || |||||||||||||||  ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  18442135 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 18442048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 489
Target Start/End: Original strand, 29720074 - 29720161
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataaggactggtca-accttggg 489  Q
    |||||||||||||||  ||||||||||||||||||||  | ||||||||| ||||||| ||  |||||||||||||||| ||||||||    
T  29720074 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggg 29720161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 293 - 370
Target Start/End: Original strand, 9352805 - 9352882
Alignment:
Q  293 tgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt-tggcaatcgtgacacgat 370  Q
    |||||||| | |||||||||||||||||||||| |||||||||| ||||||| | ||||| |||| |||||||||||||    
T  9352805 tgtgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggc-atcgtgacacgat 9352882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 572
Target Start/End: Original strand, 26170366 - 26170634
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaagc 402  Q
    |||||||||||||| |||| ||||||||||| | ||||||| ||||| || |  |||||||||||||   | ||| ||||||| |  | ||||  |  ||    
T  26170366 ttggcttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag-ctggtttgcagggtgc 26170464  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgca--g 499  Q
     |||||||||||||||| |||||||||||||||  |||   ||||||||| ||||||| ||  |||||||||||||||  |||||||| | |  |||       
T  26170465 caaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgcacca 26170564  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||| ||  ||| |||||||||||||||  |||| | ||| ||||||| | ||||||||||||||    
T  26170565 atcgtgacacgacct--ggatatcgtgacacgattttatcagtggagggctagtat-ttaagtgttcttgtgc 26170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 31180823 - 31180773
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  31180823 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 425 - 572
Target Start/End: Complemental strand, 35388169 - 35388022
Alignment:
Q  425 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggc---cgttgcagatcgtgacacgatctagggaa 520  Q
    |||| |||||||||||   ||||||||| ||||||||||  |||||||||||||||| |||||||| |   |||| || |||||||||||||||  ||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgtt-caaatcgtgacacgatct--ggaa 35388073  T
Q  521 atcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||||  |||| | | | ||||||| | ||||||||||||||    
T  35388072 atcgtgacacgattttatcagaggaaggctagtat-ttaagtgttcttgtgc 35388022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 43592847 - 43592797
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  43592847 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 307 - 370
Target Start/End: Original strand, 36931855 - 36931918
Alignment:
Q  307 gcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||||| |||||| ||||||    
T  36931855 gcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggc-atcgtggcacgat 36931918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 15465125 - 15465050
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||||| || |||||||||| ||||||| ||||| || |  |||||||||||||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgat 15465050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 12083658 - 12083708
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||| |||||| |||||||||||||||||| ||||||| ||||||||    
T  12083658 attggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 304 - 353
Target Start/End: Original strand, 11916453 - 11916502
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||| ||||    
T  11916453 ttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 370
Target Start/End: Original strand, 29719964 - 29720040
Alignment:
Q  294 gtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| | ||||||| |||| ||||||| |||||||||||||    
T  29719964 gtgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgat 29720040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 29722152 - 29722227
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| |||| ||||||| |||||||||||||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgat 29722227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 29752390 - 29752315
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgat 29752315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 474
Target Start/End: Original strand, 29722261 - 29722332
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataagga 474  Q
    |||||||||||||||  ||||||||||||||||||||  | ||||||||| ||||||| ||  |||||||||    
T  29722261 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 25412396 - 25412434
Alignment:
Q  332 cagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  25412396 cagagaaatcgtgacacgatttggcaatcgtgacacgat 25412434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 35388246 - 35388197
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtg 344  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtg 35388197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 43625641 - 43625608
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagag 336  Q
    |||||||||||||||||||| |||||||||||||    
T  43625641 attggcttcaaatttgtggtctggaagaacagag 43625608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 9352916 - 9352972
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    |||||||| ||||||  || |||||||||||||||||   |||||||||||||||||    
T  9352916 aaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagt 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 265; Significance: 1e-147; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 288 - 648
Target Start/End: Complemental strand, 35745986 - 35745626
Alignment:
Q  288 ttaaatgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagac 387  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |    
T  35745986 ttaaatatgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagatgccgtgagcc 35745887  T
Q  388 aagcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttg 487  Q
    ||| ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  35745886 aagtttgttggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtcaacctgg 35745787  T
Q  488 gggccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaa 587  Q
    || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||       | ||| ||    
T  35745786 ggaccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-agataa 35745688  T
Q  588 ccttgagagagcttaagagagaaaacttggagatcaaagat-gggatcctttggggtgtgtt 648  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35745687 ccttaagagagcttaagagagaaaacttggagatcaaagatggggatcctttggggtgtgtt 35745626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 301 - 647
Target Start/End: Original strand, 39784330 - 39784675
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||| | |||||||||||||| |||| | ||||||| |||| ||||| ||     
T  39784330 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 39784429  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  39784430 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcaga 39784529  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagct 600  Q
    |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||  ||||||||||||       ||||| |||||| ||||||||    
T  39784530 tcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc-ttttttgaagagaaccttaagagagct 39784628  T
Q  601 taagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  39784629 taagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 39784675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 10683746 - 10684015
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   | | | ||||||| | || ||||  || |    
T  10683746 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacg 10683844  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| |||||||||||    
T  10683845 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaacttggggaccgttgcagat 10683944  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  10683945 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 10684015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 25327671 - 25327940
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagatacc-gtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |   ||||| ||||||   |  |  | ||||| | || ||||  || |    
T  25327671 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgag-ctagtttgcaggacg 25327769  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | ||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| ||||||||| |    
T  25327770 ccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagct 25327869  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||  ||||||||||||    
T  25327870 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 25327940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 4759541 - 4759809
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| | || ||||  || |    
T  4759541 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgag-ctagtttgcaggacg 4759639  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||| |||||||  | |  ||| |    
T  4759640 ccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaa 4759739  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||  ||||||||||||||||||||||||| | | ||||||||||||  ||||||||||||    
T  4759740 tcgtgacacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 4759809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 6311928 - 6311659
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| |||| || |||||||| |  |||||||||||||   | | | ||||||| | || ||||  || |    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacg 6311830  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||| | | |||| ||    
T  6311829 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgggtcagatgcaaat 6311730  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||   ||||||||||| ||| |||||||||| | | ||||||||||||  ||||||||||||    
T  6311729 cgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgc 6311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 18852634 - 18852902
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| |||||||  ||||||| |  |||||||||||||   | | | ||||||| | || ||||  || |    
T  18852634 attggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacg 18852732  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | |  |||||    
T  18852733 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcaga 18852832  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||| |  |||||||||| ||||||| |||||| | | ||||||||||||  ||||||||||||    
T  18852833 tcgtgacacgattt--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 18852902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 303 - 571
Target Start/End: Complemental strand, 30656275 - 30656008
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   | | | ||||||| | || ||||  || |    
T  30656275 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacg 30656177  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||| | |  ||| |    
T  30656176 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaa 30656077  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtg 571  Q
    ||||||||||||||  |||||||||| ||||||| |||||| | | ||||||||||||  |||||||||||    
T  30656076 tcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 30656008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 7289536 - 7289704
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||  | | |||| ||||    
T  7289536 aaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtctaccttggatcagatgcaaatcg 7289635  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| ||||||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  7289636 tgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 7289704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 18870028 - 18870296
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   | |||  |||||| | || ||||  || |    
T  18870028 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgag-ctagtttgcaggacg 18870126  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||| |||||||| | |  |||||    
T  18870127 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcagacgcaga 18870226  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||| |  | |||||||| ||||||| |||||| | | ||||||||||||  ||||||||||||    
T  18870227 tcgtgacacgattt--gaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgc 18870296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 303 - 571
Target Start/End: Complemental strand, 36980007 - 36979741
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| | || ||||  || |    
T  36980007 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgag-ctagtttgcaggacg 36979909  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||      ||| |    
T  36979908 ccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgtacgcaaa 36979809  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtg 571  Q
    ||||||||||||||  |||||||||| ||||||| |||||| | | | ||||||| | |||||||||||||    
T  36979808 tcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtat-ttaagtgttcttgtg 36979741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 10688707 - 10688875
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||| | | |||| ||||    
T  10688707 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgggtcagatgcaaatcg 10688806  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||   ||||||||||| ||| |||||||||| | | ||||||||||||  ||||||||||||    
T  10688807 tgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgc 10688875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 303 - 481
Target Start/End: Original strand, 33037294 - 33037472
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| | || ||||  || |    
T  33037294 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgag-ctagtttgcaggacg 33037392  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 481  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  33037393 ccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 33037472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 295 - 572
Target Start/End: Original strand, 1261414 - 1261692
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | |||| ||||||||||||||||||||||||| || ||||| | ||||| ||||||| ||||||||||||   | ||| ||||||| | || |    
T  1261414 tgttgatatttggtttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctagtt 1261511  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggc 491  Q
    |||  |  || |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||  |||||||||||||||| |||||||| |    
T  1261512 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggac 1261611  T
Q  492 ---cgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
       |||| || |||||||||||||||  |||||||||||||||||||  |||| | | | ||||||| ||||||||||||||||    
T  1261612 atacgtt-caaatcgtgacacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgc 1261692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 3439095 - 3439271
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt-tggcaatcgtgacacgat--cggagataccgtgagacaagcttgctaga 399  Q
    |||| ||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||  ||| | | ||||||| | || ||||  |     
T  3439095 attgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggca-tcgtgacacgatttcgggg-tgccgtgag-ctaggttgcaggg 3439191  T
Q  400 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     |||||||||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  3439192 tgcaaaatcgtgacacgat-ttgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 3439271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 534
Target Start/End: Complemental strand, 42575902 - 42575670
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||| ||||||||    ||| |||||||  | | ||||  |        
T  42575902 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagttagggttgcaggggtg 42575803  T
Q  403 aaaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcaga 500  Q
     |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| |    
T  42575802 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggacggacgcaaa 42575703  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    |||||||||||| | || ||||||||||||||||    
T  42575702 tcgtgacacgat-tgggcaaatcgtgacacgatt 42575670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 294 - 480
Target Start/End: Original strand, 2627317 - 2627503
Alignment:
Q  294 gtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagc 391  Q
    ||||||| | ||||||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  |     
T  2627317 gtgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgattccgtgag-ctggt 2627414  T
Q  392 ttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||  |  || ||||||||||||||| |||||||||||||||||||||   ||||||||| ||||||| ||  ||||||||| |||||    
T  2627415 ttgcatggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtc 2627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 7412952 - 7412877
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |  |||||||||||||    
T  7412952 tgttgaaatttgacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 7412877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 479
Target Start/End: Original strand, 15290150 - 15290327
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| |  || | ||||||||    ||| |||||||  | | ||||  |        
T  15290150 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgcaggggtg 15290249  T
Q  403 aaaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggt 479  Q
     ||||||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  ||||||||||||||    
T  15290250 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 479
Target Start/End: Original strand, 15470519 - 15470696
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| |  || | ||||||||    ||| |||||||  | | ||||  |        
T  15470519 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgcaggggtg 15470618  T
Q  403 aaaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggt 479  Q
     ||||||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  ||||||||||||||    
T  15470619 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15470696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 5701958 - 5702009
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  5701958 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 26288517 - 26288332
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |||||||| |||   | ||| ||||||| |  | |    
T  26288517 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacatgattttgtgatgccgtgag-ctggtt 26288420  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || |||||||||||| |||||||||||||||||||| |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26288419 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26288332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 26301774 - 26301589
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |||||||| |||   | ||| ||||||| |  | |    
T  26301774 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacatgattttgtgatgccgtgag-ctggtt 26301677  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || |||||||||||| |||||||||||||||||||| |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26301676 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 26313768 - 26313583
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |||||||| |||   | ||| ||||||| |  | |    
T  26313768 tgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacatgattttgtgatgccgtgag-ctggtt 26313671  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || |||||||||||| |||||||||||||||||||| |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26313670 tgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26313583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 648
Target Start/End: Original strand, 10684047 - 10684114
Alignment:
Q  581 aagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||     |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  10684047 aagacaaccttgagaggttggaagagagataacttggagatcaaagaggggatcctttggggtgtgtt 10684114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 480
Target Start/End: Original strand, 25689646 - 25689725
Alignment:
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| ||||||  ||||||||||| |||||||   |||||||||| ||||||||||  |||||||||||||||    
T  25689646 gcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 10688625 - 10688675
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  10688625 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 304 - 353
Target Start/End: Complemental strand, 4456624 - 4456575
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  4456624 ttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 304 - 353
Target Start/End: Original strand, 19175233 - 19175282
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||||||||    
T  19175233 ttggcttcaaatttgcggtttggaagaacagaaaaatcgtgtcacgattt 19175282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 7289434 - 7289501
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||| ||||||||||||||| ||||||||||||| ||| ||| |||||||| |  |||||||||||||    
T  7289434 attgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgat 7289501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 25689568 - 25689618
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||| ||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  25689568 attgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 31042908 - 31042983
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||||| | ||| ||||||||||||||| |||||||| |||| ||||||| |||| ||||||| |||||||||||||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggc-atcgtgacacgat 31042983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Complemental strand, 1746700 - 1746665
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    |||||||||||||| |||||||||||||||||||||    
T  1746700 aatcgtgacacgattttgggaaatcgtgacacgatt 1746665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 23799098 - 23799149
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||| ||||||||||||||||| |||||||||| ||||||  ||||||||    
T  23799098 aattggtttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Complemental strand, 34256986 - 34256951
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    |||||||||||||| |||||||||||||||||||||    
T  34256986 aatcgtgacacgattttgggaaatcgtgacacgatt 34256951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 534
Target Start/End: Original strand, 33037397 - 33037431
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||||||| |||||||||||||||||||    
T  33037397 atcgtgacacgatcttgggaaatcgtgacacgatt 33037431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 595 - 647
Target Start/End: Original strand, 25327952 - 25328004
Alignment:
Q  595 agagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||| ||||||||||| ||||||||||||||||  |||||||| |||| |||||    
T  25327952 agaacttaagagagagaacttggagatcaaaggagggatcctatgggttgtgt 25328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 599 - 647
Target Start/End: Original strand, 25328082 - 25328130
Alignment:
Q  599 cttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||| ||||||||||||||||  |||||||| |||| |||||    
T  25328082 cttaagagagagaacttggagatcaaaggagggatcctatgggttgtgt 25328130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 19345010 - 19344657
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||| |||| |||    
T  19345010 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgatacgatcggagatgccgtgagccaagtttg 19344911  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19344910 ctggaagcaaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 19344811  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||       | ||| |||||| ||    
T  19344810 tgcagatcatgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-agataaccttaag 19344712  T
Q  595 agagcttaagagagaaaacttggagatcaaagat-gggatcctttggggtgtgtt 648  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19344711 agagcttaagagagaaaacttggagatcaaagatggggatcctttggggtgtgtt 19344657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 19349868 - 19349515
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |||| |||    
T  19349868 tgttgaaaattggtttcaaatttgtggtttggaagaacagaggaatcgtgtcgcaatttggcaatcgtgacacgatcggagatgccgtgagccaagtttg 19349769  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  || ||||    
T  19349768 ctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtcaacctgaggaccgt 19349669  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||       | ||| |||||| ||    
T  19349668 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgg-agataaccttaag 19349570  T
Q  595 agagcttaagagagaaaacttggagatcaaagat-gggatcctttggggtgtgtt 648  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  19349569 agagcttaagagagaaaacttagagatcaaagatggggatcctttggggtgtgtt 19349515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 39811484 - 39811753
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagat-accgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  | ||||| || |||| ||||  || |    
T  39811484 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaag-caagtttgcaggacg 39811582  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||||||||||||||    
T  39811583 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtctgccttggggccgttgcagat 39811682  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  39811683 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 39811753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 303 - 647
Target Start/End: Complemental strand, 32247345 - 32247021
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| | ||||||||||||||  ||||| ||||||| |||| ||||| || ||    
T  32247345 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccaagtttgctggatgc 32247246  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatc 502  Q
    ||||                     ||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||||||| ||| ||||||||||||    
T  32247245 aaaa---------------------tcgtggcacgattcagaaacttgctcgttaagtatcactgataaagactggtcaacctggggaccgttgcagatc 32247167  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtg-cnnnnnnngaagacaaccttgagagagctt 601  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||| |       ||||| |||||| ||||| |||    
T  32247166 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtgcctttttttgaagataaccttaagagaactt 32247067  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  32247066 aagagagaaaacttggagatcaaagagggggtcctatggggtgtgt 32247021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 14292118 - 14291850
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  ||||||||||||||  ||| | ||||||| | || ||||  || |    
T  14292118 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgag-ctagtttgcaggacg 14292020  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| ||||||||      ||| |    
T  14292019 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgtacgcaaa 14291920  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||  |||||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  14291919 tcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 14291850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 9295869 - 9296137
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   | | | ||||||| | || ||||  || |    
T  9295869 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggatg 9295967  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||| |||||||| | |  ||| |    
T  9295968 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcggacgcaaa 9296067  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||  | |||||||||||||||| |||||| | | ||||||||| ||||||||||||||||    
T  9296068 tcgtgacacgatct--gaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgc 9296137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 11098394 - 11098662
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  || ||||||||||   | | | ||||||| | || ||||  || |    
T  11098394 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgag-ctagtttgcaggacg 11098492  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||| |||||||||      ||| |    
T  11098493 ccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgtacgcaaa 11098592  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||  |||||||||| |||||||||||||| | | |||||| |||||  ||||||||||||    
T  11098593 tcgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgc 11098662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 304 - 480
Target Start/End: Complemental strand, 25410257 - 25410081
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||||   | ||||  |  |    
T  25410257 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgattttgtgatgccgtgagatg-gtttgcagggtg 25410160  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    | |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||||  ||||||||| |||||    
T  25410159 ccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtc 25410081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 308 - 572
Target Start/End: Complemental strand, 4484910 - 4484646
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaagcaaa 405  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| | || ||||  |  || ||    
T  4484910 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcatgatgccgtgag-ctagtttgcagggtgccaa 4484813  T
Q  406 atcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggc---cgttgcagat 501  Q
    ||||||||||||||||  | |||||||||||||||   ||||||||| ||||||| ||| |||||||||||||||  |||||||| |   |||  || ||    
T  4484812 atcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgggacgtacgtacca-at 4484714  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||  |||||||||||||||||||  |||| | | | ||||||| | ||||||||||||||    
T  4484713 cgtgacacgatct--ggaaatcgtgacacgattttatcagtggaaggctagtat-ttaagtgttcttgtgc 4484646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 303 - 534
Target Start/End: Complemental strand, 12647960 - 12647729
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |        
T  12647960 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 12647861  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
     |||||||| ||||||  ||||||||||||||||||| || ||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  12647860 caaatcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 12647761  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  12647760 cgtgacacgat-tgggaaaatcgtgacacgatt 12647729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 460
Target Start/End: Complemental strand, 3492377 - 3492212
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| || |||||||||| ||| ||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  | |    
T  3492377 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggca-tcgtgacacgattttgtgatgccgtgag-ctggtt 3492280  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    |||  |  || |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  3492279 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagt 3492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 295 - 572
Target Start/End: Original strand, 32289148 - 32289425
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacga-tcggagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||||| |  | ||| ||||||| |  | |    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggtt 32289245  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggc 491  Q
    |||  |  || ||||| ||||||||||||| | |||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||  |||||||| |    
T  32289246 tgcagggtgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggac 32289345  T
Q  492 ---cgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
       || | || |||||||||||| ||  |||||||||||||||||||  |||| | ||| ||||||| | ||||||||||||||    
T  32289346 gtacgctcca-atcgtgacacgacct--ggaaatcgtgacacgattttatcagtggagggctagtat-ttaagtgttcttgtgc 32289425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 460
Target Start/End: Original strand, 30832921 - 30833086
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagctt 393  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| || || || |  |||||||||||||   | ||| ||||||| |  | ||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgag-ctggttt 30833019  T
Q  394 gctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||  |  || |||||||||||||||||||||||||||||||||||||   ||||||||| |||||||    
T  30833020 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagt 30833086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 36757419 - 36757475
Alignment:
Q  297 ttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  36757419 ttgaaaattggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 36757475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 44310478 - 44310545
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||    
T  44310478 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 44310545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 8389631 - 8389681
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 28258669 - 28258727
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||    
T  28258669 tgttgaaatttggcttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattt 28258727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 33528104 - 33528155
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  33528104 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 10706733 - 10706783
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 20522839 - 20522797
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtg 344  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  20522839 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 20522797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 21630561 - 21630511
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 39483493 - 39483443
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  39483493 attggcttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 40739457 - 40739382
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||||| ||||||||||||  ||||||| ||||| ||||||| ||||||||||||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggca-tcgtgacacgat 40739382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 23077952 - 23078002
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||| || |||||||||||||||||| ||||||| ||||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 6266383 - 6266459
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||||||||||||||  ||||||||||||||||||||   |||||| || ||||||| ||  ||||||||| |||||    
T  6266383 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtc 6266459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 535
Target Start/End: Complemental strand, 25410155 - 25410120
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgattt 535  Q
    ||||||||||||||| ||||||||||||||||||||    
T  25410155 atcgtgacacgatcttgggaaatcgtgacacgattt 25410120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 535
Target Start/End: Original strand, 30833032 - 30833067
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgattt 535  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30833032 atcgtgacacgatcttgggaaatcgtgacacgattt 30833067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 534
Target Start/End: Complemental strand, 3492266 - 3492232
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||||||| |||||||||||||||||||    
T  3492266 atcgtgacacgatcttgggaaatcgtgacacgatt 3492232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 454
Target Start/End: Complemental strand, 34389365 - 34389316
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctgg 454  Q
    |||||||||||||| |||||||| ||||||||||||   |||||||||||    
T  34389365 aatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgg 34389316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 13569946 - 13569914
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacaga 335  Q
    ||||||||||||||||||||||| |||||||||    
T  13569946 attggcttcaaatttgtggtttgaaagaacaga 13569914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 28258759 - 28258815
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    |||||||| ||| || ||| |||||||||||||||||   |||||||||||||||||    
T  28258759 aaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 370
Target Start/End: Original strand, 29867491 - 29867531
Alignment:
Q  330 aacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    ||||||| ||||||| ||||||||||||| |||||||||||    
T  29867491 aacagagaaatcgtgacacgatttggcaagcgtgacacgat 29867531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 248; Significance: 1e-137; HSPs: 3)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 295 - 648
Target Start/End: Original strand, 18663 - 19015
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||  | |||||  ||| |||    
T  18663 tgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagaggcagtgagctaagtttg 18762  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||    
T  18763 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcatcctggggaccgt 18862  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||| |||||||||||||||| |||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||       |||||||||||||||    
T  18863 tgcaaatcgtgacacgatctaaggaaatcgtggcacgatttcttcagggcaggactaatatttaaagtgttcttgtgc-ttttttgaagacaaccttgag 18961  T
Q  595 agagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18962 agaacttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 19015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 302 - 572
Target Start/End: Original strand, 13790 - 14060
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| | ||  | |||||  ||| ||||| ||||    
T  13790 aattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaag 13889  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  13890 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagat 13989  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  13990 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 14060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 648
Target Start/End: Original strand, 14092 - 14159
Alignment:
Q  581 aagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||     |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  14092 aagacaaccttgagaggttggaagagagataacttggagatcaaagaggggatcctttggggtgtgtt 14159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 232; Significance: 1e-128; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 295 - 648
Target Start/End: Original strand, 2672418 - 2672781
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| ||| |||| |||    
T  2672418 tgttggaatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcggagatgccgggagccaagtttg 2672517  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2672518 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgt 2672617  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc----------nnnnnnngaaga 584  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||                  ||||    
T  2672618 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagagaaccttaaga 2672717  T
Q  585 caaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  2672718 caaccttgagagaacttaagagagaaaacttggaggtcaaagaggggatcctttggggtgtgtt 2672781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 295 - 648
Target Start/End: Original strand, 2676574 - 2676937
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||  || ||| |||| |||    
T  2676574 tgttggaatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcggagatgtcgggagccaagtttg 2676673  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  2676674 ctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtcaacctggggaccgt 2676773  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc----------nnnnnnngaaga 584  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||                  ||||    
T  2676774 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagagaaccttaaga 2676873  T
Q  585 caaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  2676874 caaccttgagagaacttaagagagaaaacttggaggtcaaagaggggatcctttggggtgtgtt 2676937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 32476072 - 32475719
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||  | ||||| |||| |      
T  32476072 tgttgaagattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagttct 32475973  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||    
T  32475972 ctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcatcttggggaccgt 32475873  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||        | |  |||||||||    
T  32475872 tgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgag 32475773  T
Q  595 agagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32475772 agaacttaagagaggaaacttggagatcaaagatgggatcctttggggtgtgtt 32475719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 295 - 648
Target Start/End: Complemental strand, 32480930 - 32480577
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttg 394  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||  | ||||| |||| |      
T  32480930 tgttgaagattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagttct 32480831  T
Q  395 ctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgt 494  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||    
T  32480830 ctgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcatcttggggaccgt 32480731  T
Q  495 tgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgag 594  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||| ||||||||||||||||        | |  |||||||||    
T  32480730 tgcatatcgtgacacgatctagggaaatcgtggcacgatttcttctaggcaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgag 32480631  T
Q  595 agagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32480630 agaacttaagagaggaaacttggagatcaaagatgggatcctttggggtgtgtt 32480577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 302 - 648
Target Start/End: Complemental strand, 24968698 - 24968342
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  | ||||| |||| ||||| ||||    
T  24968698 aattgacttcaaattagtggtttggaagaacaaaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgctggaag 24968599  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||| ||    
T  24968598 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcaaat 24968499  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc----------nnnnnnngaagacaacctt 591  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||                  ||||||| |||    
T  24968498 cgtgccacgatctagggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgcttatttgaaagggggcttaagacaatctt 24968399  T
Q  592 gagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24968398 gagagagctcaagagagataacttggagatcaaagaggggatcctttggggtgtgtt 24968342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 302 - 572
Target Start/End: Complemental strand, 8512821 - 8512551
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| | ||  | |||||  ||| ||||| ||||    
T  8512821 aattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaag 8512722  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  8512721 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagat 8512622  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  8512621 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 8512551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 302 - 572
Target Start/End: Complemental strand, 8517701 - 8517431
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| ||||||| | |||||||||||||||||||||||||| ||| ||||||||||||| | ||  | |||||  ||| ||||| ||||    
T  8517701 aattgacttcaaattagtggtttaggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaag 8517602  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  8517601 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagat 8517502  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  8517501 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 8517431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 303 - 647
Target Start/End: Complemental strand, 18657022 - 18656667
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| || |||||||||| |||| || |||||||| |  |||||||||||||   | | | ||||||  |||| ||||  || |    
T  18657022 attggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacg 18656923  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  18656922 ccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 18656823  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc----------nnnnnnngaagacaacctt 591  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||                  |||||||||||    
T  18656822 cgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagacaaccttaagacaacctt 18656723  T
Q  592 gagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  18656722 gagagaacttaagagagaaaacttggagatcaaagaggggatcctatggggtgtgt 18656667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 303 - 535
Target Start/End: Original strand, 22172669 - 22172900
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| || | ||||  || |    
T  22172669 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcca-gtttgcaggacg 22172767  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||||| ||    
T  22172768 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtcaaccttggttccgttgcaaat 22172867  T
Q  502 cgtgacacgatctagggaaatcgtgacacgattt 535  Q
    ||||||||||| | ||||||||||| ||||||||    
T  22172868 cgtgacacgat-ttgggaaatcgtggcacgattt 22172900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 28503326 - 28503595
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||  ||||||||||||| ||||||| |||||||| |  |||||||||||||   | |   ||||||| | || ||||| || |    
T  28503326 attggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgag-ctagtttgctggacg 28503424  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||||||| | |  ||| ||    
T  28503425 ccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaat 28503524  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||| ||||||||||| ||||||| |||||| | | ||||||||||||  ||||||||||||    
T  28503525 cgtgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 28503595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 40372263 - 40372531
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| | || ||||  || |    
T  40372263 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgag-ctagtttgcaggacg 40372361  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||| ||  | |  ||| |    
T  40372362 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaa 40372461  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||| ||||||||  ||||||||||||||||||||||||| | | ||||||||||||  ||||||||||||    
T  40372462 tcgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 40372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 28501159 - 28501428
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||  ||||||||||||| ||||||| |||||||| |  |||||||||||||   | |   ||||||| | || ||||  ||      
T  28501159 attggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgag-ctagtttgcaggaca 28501257  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| | |  ||| ||    
T  28501258 ccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaat 28501357  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    | ||||||||||| ||||||||||| ||||||| |||||| | | ||||||||||||  |||| |||||||    
T  28501358 catgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgc 28501428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 7167875 - 7167607
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||| | ||||||||||||| ||||||| |||||||| |  |||||||||| ||   | | | ||||||| | || ||||  || |    
T  7167875 attggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgag-ctagtttgcaggacg 7167777  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| | |  ||| |    
T  7167776 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcaaa 7167677  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||| |  | ||||| || |||||||||||||| | | ||||||||||||  ||||||||||||    
T  7167676 tcgtgacacgattt--gaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 7167607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 303 - 571
Target Start/End: Complemental strand, 8477995 - 8477729
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||| ||| |||||||| |  |||||||||||||   ||| | ||||||| | || ||||| || |    
T  8477995 attggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgag-ctagtttgctggatg 8477897  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||| ||||||||      ||| |    
T  8477896 ccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 8477797  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtg 571  Q
    ||||||||||||||  |||||||||||||||||| |||||| | | | ||||||| | |||||||||||||    
T  8477796 tcgtgacacgatct--ggaaatcgtgacacgattgcttcagaggaaggctagtat-ttaagtgttcttgtg 8477729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 8738631 - 8738798
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcagatc 502  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||  | |  ||| |||    
T  8738631 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatc 8738730  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||| |||||  |||||||||| ||||||| |||||| | | | ||||||||||  ||||||||||||    
T  8738731 gtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgc 8738798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 9090869 - 9091036
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcagatc 502  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||  | |  ||| |||    
T  9090869 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatc 9090968  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||| |||||  |||||||||| ||||||| |||||| | | | ||||||||||  ||||||||||||    
T  9090969 gtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgc 9091036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 27352189 - 27352356
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcagatc 502  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||| |||||||| | |  ||| |||    
T  27352189 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatc 27352288  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||| |  |||||||||| ||||||| |||||| | | | ||| ||||||  ||||||||||||    
T  27352289 gtgacacgattt--ggaaatcgtggcacgattgcttcagaggaaggctaatatatattgtgttcttgtgc 27352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 404 - 489
Target Start/End: Original strand, 2671173 - 2671259
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggg 489  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||| ||||||||    
T  2671173 aaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggg 2671259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 308 - 534
Target Start/End: Original strand, 10055817 - 10056044
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |     ||||    
T  10055817 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10055916  T
Q  408 cgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatcgtg 505  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||||||    
T  10055917 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 10056016  T
Q  506 acacgatctagggaaatcgtgacacgatt 534  Q
    ||||||| | || ||||||||||||||||    
T  10056017 acacgat-tgggcaaatcgtgacacgatt 10056044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 308 - 534
Target Start/End: Original strand, 10066927 - 10067154
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |     ||||    
T  10066927 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10067026  T
Q  408 cgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatcgtg 505  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||||||    
T  10067027 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 10067126  T
Q  506 acacgatctagggaaatcgtgacacgatt 534  Q
    ||||||| | || ||||||||||||||||    
T  10067127 acacgat-tgggcaaatcgtgacacgatt 10067154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 534
Target Start/End: Complemental strand, 4599100 - 4598868
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||| ||||||||    ||| |||||||  | | ||||  |        
T  4599100 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgcaggggtg 4599001  T
Q  403 aaaatcgtgacacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcaga 500  Q
     |||||||| |||||| | |||||||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| |    
T  4599000 caaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 4598901  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    |||||||||||| | || ||||||||||||||||    
T  4598900 tcgtgacacgat-tgggaaaatcgtgacacgatt 4598868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 534
Target Start/End: Complemental strand, 4601321 - 4601089
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||| ||||||||    ||| |||||||  | | ||||  |        
T  4601321 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgcaggggtg 4601222  T
Q  403 aaaatcgtgacacgatct-tgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcaga 500  Q
     |||||||| |||||| | |||||||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| |    
T  4601221 caaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 4601122  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    |||||||||||| | || ||||||||||||||||    
T  4601121 tcgtgacacgat-tgggaaaatcgtgacacgatt 4601089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 10058039 - 10058212
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |     ||||    
T  10058039 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10058138  T
Q  408 cgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10058139 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 10060261 - 10060434
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |     ||||    
T  10060261 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10060360  T
Q  408 cgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10060361 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 10062483 - 10062656
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |     ||||    
T  10062483 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10062582  T
Q  408 cgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10062583 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 10064705 - 10064878
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |     ||||    
T  10064705 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10064804  T
Q  408 cgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  10064805 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 292 - 353
Target Start/End: Original strand, 27974430 - 27974491
Alignment:
Q  292 atgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  27974430 atgtgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27974491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 6716092 - 6716269
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggagataccgtgagacaagcttgctagaa 400  Q
    |||| ||| ||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||  ||| | | ||||||| | || ||||  |      
T  6716092 attgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgggg-tgccgtgag-ctaggttgcagggt 6716189  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  6716190 gcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6716269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 54634717 - 54634894
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat--cggagataccgtgagacaagcttgctagaa 400  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  || ||||||||||  ||| | | |||||||  ||| ||||  |      
T  54634717 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcgggg-tgccgtgagctaag-ttgcagggt 54634814  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  54634815 gcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 54634894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 21711826 - 21711768
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  21711826 tgttgtaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 39032017 - 39032075
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  39032017 tgttgaaaattggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 1306495 - 1306439
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  1306495 aaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagt 1306439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 480
Target Start/End: Original strand, 6718374 - 6718453
Alignment:
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  6718374 gcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 404 - 534
Target Start/End: Original strand, 25637121 - 25637251
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatc 502  Q
    |||||||| ||||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| |||    
T  25637121 aaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatc 25637220  T
Q  503 gtgacacgatctagggaaatcgtgacacgatt 534  Q
    |||||||||| | || ||||||||||||||||    
T  25637221 gtgacacgat-tgggaaaatcgtgacacgatt 25637251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 37726299 - 37726224
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||||||||||||||||||| ||||||| ||||| || |  |||||||||||||    
T  37726299 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgat 37726224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 27027331 - 27027273
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||| | ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  27027331 tgttgaaaatagacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 27038666 - 27038608
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||    
T  27038666 tgttgaaaattggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgattt 27038608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 30709266 - 30709316
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 36029709 - 36029659
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  36029709 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 36029659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 10210985 - 10211217
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||| ||||||||||||||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |        
T  10210985 attgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttaggatgccgtgagttagggttgcaggggtg 10211084  T
Q  403 aaaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcaga 500  Q
     |||||||| |||||| |||||||| || |||||||||  ||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| |    
T  10211085 caaatcgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 10211184  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    |||||||||||| | || ||||||||||||||||    
T  10211185 tcgtgacacgat-tgggaaaatcgtgacacgatt 10211217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 23200729 - 23200654
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgat 23200654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 26928080 - 26928155
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||||||    
T  26928080 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgat 26928155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 37408036 - 37408111
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt-tggcaatcgtgacacgat 370  Q
    |||||| | |||||||||||||||||||||||||||||| || ||||||| ||||||| |||| |||||||||||||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggc-atcgtgacacgat 37408111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 648
Target Start/End: Complemental strand, 8512519 - 8512452
Alignment:
Q  581 aagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||     |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  8512519 aagacaaccttgagaggttggaagagagataacttggagatcaaagaggggatcctttggggtgtgtt 8512452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 648
Target Start/End: Complemental strand, 8517399 - 8517332
Alignment:
Q  581 aagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||     |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  8517399 aagacaaccttgagaggttggaagagagataacttggagatcaaagaggggatcctttggggtgtgtt 8517332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 23198530 - 23198455
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||| || |  |||||||||||||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgat 23198455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 480
Target Start/End: Original strand, 45282671 - 45282750
Alignment:
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  45282671 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 45282750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 302 - 344
Target Start/End: Original strand, 1730915 - 1730957
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtg 344  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  1730915 aattggcttcaaatttgtggtttggaagaacagagaaatcgtg 1730957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 10208785 - 10208963
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | |||| || |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |        
T  10208785 attgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 10208884  T
Q  403 aaaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10208885 caaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtc 10208963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 16264946 - 16264896
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||| | ||||||| ||||||||    
T  16264946 attggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 40734087 - 40734132
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  40734087 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 404 - 480
Target Start/End: Original strand, 800794 - 800870
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||||||||||||||  ||||||||||||||||||||   ||||||||| ||||||| ||  ||||||||| |||||    
T  800794 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtc 800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 3617041 - 3617272
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |        
T  3617041 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 3617140  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
     |||||||| |||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||| | ||||||   ||||||| | |  ||| ||    
T  3617141 caaatcgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacggacgcaaat 3617240  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  3617241 cgtgacacgat-tgggaaaatcgtgacacgatt 3617272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 294 - 460
Target Start/End: Original strand, 33386136 - 33386302
Alignment:
Q  294 gtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacga-tcggagataccgtgagacaagc 391  Q
    ||||||| | |||||||||||||||||||  | |||||||||| ||||||| |||| ||||||| |||||||||||| |  | ||| ||||||| |  |     
T  33386136 gtgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgccgtgag-ctggt 33386233  T
Q  392 ttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||  |  || ||||||||||||||| ||| | |||||||||||||||   |||||||||||||||||    
T  33386234 ttgcagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagt 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 40592251 - 40592302
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| || |||||    
T  40592251 aattggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 8738549 - 8738599
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| || |||||    
T  8738549 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 8738599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 9090787 - 9090837
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| || |||||    
T  9090787 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 9090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 32143928 - 32143870
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||| | ||||||||||||||||||| || |||||||||| ||||||| ||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 32143870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 35926106 - 35926057
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||| ||||||||||||||||| ||||||| ||||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 48438832 - 48438782
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||| |||||||||||||| |||||||||| ||||||| ||||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 519 - 572
Target Start/End: Original strand, 2671268 - 2671321
Alignment:
Q  519 aaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||| | | ||||||||||||  ||||||||||||    
T  2671268 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 2671321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 1306604 - 1306529
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | |||||||||||||| |||| ||||||||||||| ||||||| || || ||||||| ||||||||||||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggca-tcgtgacacgat 1306529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 7782712 - 7782637
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||||| | ||||||||| | ||||||| ||||| ||||||| ||||||||||||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgat 7782637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 309 - 353
Target Start/End: Original strand, 27985971 - 27986015
Alignment:
Q  309 ttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgattt 27986015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 32143838 - 32143782
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||||||||||||||||| | |||||||||||||||   ||||||||| |||||||    
T  32143838 aaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgttaagt 32143782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Original strand, 3393293 - 3393328
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    |||||||||||||| |||||||||||||||||||||    
T  3393293 aatcgtgacacgattttgggaaatcgtgacacgatt 3393328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Complemental strand, 5258626 - 5258591
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    |||||||||||||| |||||||||||||||||||||    
T  5258626 aatcgtgacacgattttgggaaatcgtgacacgatt 5258591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 24694655 - 24694706
Alignment:
Q  303 attggcttcaaatttgtgg-tttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  24694655 attggcttcaaatttgtggttttggaagaacagagaaatcgtgatacgattt 24694706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 534
Target Start/End: Complemental strand, 1306493 - 1306459
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||||||| |||||||||||||||||||    
T  1306493 atcgtgacacgatcttgggaaatcgtgacacgatt 1306459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 6718295 - 6718345
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| ||||||||    
T  6718295 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 572
Target Start/End: Complemental strand, 7782603 - 7782456
Alignment:
Q  425 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa-ccttggggc---cgttgcagatcgtgacacgatctagggaa 520  Q
    ||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||   ||||||| |   |||  || |||||||||||||||  ||||    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttgggacgaacgtacca-atcgtgacacgatct--ggaa 7782507  T
Q  521 atcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||||  |||| | ||| ||||||| | ||||||||||||||    
T  7782506 atcgtgacacgattttatcagtggagggctagtat-ttaagtgttcttgtgc 7782456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 370
Target Start/End: Complemental strand, 9634856 - 9634818
Alignment:
Q  332 cagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  9634856 cagagaaatcgtgacacgatttggcaatcgtgacacgat 9634818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 16498644 - 16498694
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||  ||||||| ||||||| || |||||    
T  16498644 attggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 370
Target Start/End: Complemental strand, 27453583 - 27453506
Alignment:
Q  293 tgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||||| | ||||||||||||||||||| || |||| ||||| ||| ||| ||||| ||||||| ||||||||||||    
T  27453583 tgtgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggca-tcgtgacacgat 27453506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 45282592 - 45282642
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| ||||||||    
T  45282592 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 353
Target Start/End: Original strand, 40735018 - 40735063
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| |||||||  ||||||| ||||||||    
T  40735018 cttcaaatttgtggtttggatgaacagataaatcgtgacacgattt 40735063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 47923327 - 47923368
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtg 344  Q
    ||||||||||||||||||||||| || ||||||| |||||||    
T  47923327 attggcttcaaatttgtggtttgaaaaaacagagaaatcgtg 47923368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 23198421 - 23198345
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||||||| | | | |||||||||||||||   ||||||||| ||||||| ||   ||||||||||||||    
T  23198421 aaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtc 23198345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 23200620 - 23200544
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||||||| | | | |||||||||||||||   ||||||||| ||||||| ||   ||||||||||||||    
T  23200620 aaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtc 23200544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 25637020 - 25637087
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt-tggcaatcgtgacacgat 370  Q
    |||| ||| ||||||||||| ||||||||||| | ||||||| ||||||| |||| |||||||||||||    
T  25637020 attgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggc-atcgtgacacgat 25637087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 26928189 - 26928245
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    |||||||||||| |||||| | |||||||||||||||   ||||||||| |||||||    
T  26928189 aaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagt 26928245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 27986047 - 27986103
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    |||||||||||||||  || | |||||||||||||||   |||||||||||||||||    
T  27986047 aaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggttaagt 27986103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 37726190 - 37726134
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||||||||||||| ||| | |||||||||||||||   ||||||| |||||||||    
T  37726190 aaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagt 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 41655843 - 41656132
Alignment:
Q  8 agtttggtgttaatggttccgcggttcggtgcattcatggcatggatttgaaactagaagcaaaatatcagttgtttagtgttttgttgcaacaaccaaa 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41655843 agtttggtgttaatggttccgcggttcgatgcattcatggcatggatttgaaactagaagcaaaatatcagttgtttagtgttttgttgcaacaaccaaa 41655942  T
Q  108 atgattatgctcgttttttggttctcatct---aannnnnnnncttaggcttgcccattttcctaatttgtgggtgtatttttatcacgatttagggtta 204  Q
    |||||||||||||||||||||||||||| |   ||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41655943 atgattatgctcgttttttggttctcatatctaaattttttttcttaggcttgcccattttcctaatttgtgggtgtatttttatcacgatttagggtta 41656042  T
Q  205 ggctatcgtgatttaattttgtcatacatagagaattcatgtaaacgctttcctcgtcatttctttctatgatgtcatcatcgttaaatg 294  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  41656043 ggctatcgtgatttaattttgtcaaacatagagaattcatgtaaatgctttcctcgtcatttctttctatgatgtcatcatcgttcaatg 41656132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 290 - 648
Target Start/End: Original strand, 43987943 - 43988312
Alignment:
Q  290 aaatgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaa 389  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||  | ||||| |||    
T  43987943 aaatttgttgaaaattggcttcaaatttgtggtttgggagagcagaggaatcgtgtcgcgatttggcaatcgtgacacgatcagagaggcagtgagccaa 43988042  T
Q  390 gcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggg 489  Q
    | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  43988043 gtttgctggaagcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttgggg 43988142  T
Q  490 gccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnng--------- 580  Q
     |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||       |             
T  43988143 accgttgcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgctcttgtgcattttttggagataacc 43988242  T
Q  581 --aagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
      ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43988243 ttaagacaaccttgagagaacttaagagagaaaacttggagatcaaagaggggatcctttggggtgtgtt 43988312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 302 - 647
Target Start/End: Original strand, 25439405 - 25439748
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||  ||||| ||||||| |||| ||||  || |    
T  25439405 aattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgagccaagtttgcaggatg 25439504  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  25439505 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtcaacctggggactgttgcagat 25439604  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  ||||||||||||       |||||||||||| |||||||||    
T  25439605 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc--tttttgaagacaaccttaagagagctt 25439702  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||||    
T  25439703 aagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 25439748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 301 - 647
Target Start/End: Original strand, 1054519 - 1054864
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| | |||||||| ||||| |||| | ||||||| |||| ||||  ||     
T  1054519 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgattggaggtgccgtgagccaagtttgcaggac 1054618  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||  ||||||||||    
T  1054619 gccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaacctgggaaccgttgcaga 1054718  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagct 600  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||       |||||||||||| ||||||||    
T  1054719 tcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgc-ttttttgaagacaaccttaagagagct 1054817  T
Q  601 taagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  1054818 taagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 1054864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 301 - 647
Target Start/End: Original strand, 44023382 - 44023726
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||| | |||||||||||||| |||| | ||||||| |||| ||||| ||     
T  44023382 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 44023481  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  44023482 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcaga 44023581  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagct 600  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||  ||||||||||||       || || |||||| ||||||||    
T  44023582 tcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactggtatatattgtgttcttgtgc--tttttgaggataaccttaagagagct 44023679  T
Q  601 taagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  44023680 taagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 44023726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 302 - 647
Target Start/End: Original strand, 25444598 - 25444941
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||||  ||||| ||||||| |||| |||   || |    
T  25444598 aattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgagccaagtttgtaggatg 25444697  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  25444698 caaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaacctagggaccgttgcagat 25444797  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  ||||||||||||       |||||||||||| |||||||||    
T  25444798 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc--tttttgaagacaaccttaagagagctt 25444895  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||||    
T  25444896 aagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 25444941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 301 - 647
Target Start/End: Complemental strand, 39446077 - 39445732
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||| | ||||||||||||||  ||||| ||||||| |||| ||||  ||     
T  39446077 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccaagtttgcaggac 39445978  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    || |||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  39445977 gccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtcaacctggggaccgttgcaga 39445878  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagct 600  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||       |||||||||||| ||||||||    
T  39445877 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc-ttttttgaagacaaccttaagagagct 39445779  T
Q  601 taagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  39445778 taagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 39445732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 304 - 572
Target Start/End: Complemental strand, 41391177 - 41390910
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagca 403  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||||| | ||||||||||||||  ||||| ||||||| || | ||||  || ||     
T  41391177 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagcca-gtttgcaggacgcc 41391079  T
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||||||||||| ||| ||| |||||||||    
T  41391078 aaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggggtccgctgcagatcg 41390979  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||||||||||||  ||||||||||||    
T  41390978 tgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 41390910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 357 - 572
Target Start/End: Complemental strand, 41398779 - 41398565
Alignment:
Q  357 aatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggtt 456  Q
    ||||||||||||||  ||||| ||||||| || | ||||  || || |||||||| ||||||||||||||||||||||||||||||||||||||||  ||    
T  41398779 aatcgtgacacgatttgagatgccgtgagcca-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatt 41398681  T
Q  457 aagtatctctgataaggactggtcaaccttggggccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtata 556  Q
    |||||||  |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||    
T  41398680 aagtatcattgataaggactggtcaacctggggtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtata 41398581  T
Q  557 taaagtgttcttgtgc 572  Q
    ||  ||||||||||||    
T  41398580 tattgtgttcttgtgc 41398565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 24786933 - 24787100
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatc 502  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||| | |  ||| |||    
T  24786933 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatc 24787032  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||  |||||||||| ||||||| |||||| | | ||||||||||||  ||||||||||||    
T  24787033 gtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 24787100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 404 - 571
Target Start/End: Original strand, 24793755 - 24793921
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatc 502  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||| | |  ||| |||    
T  24793755 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatc 24793854  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtg 571  Q
    ||||||||||||  |||||||||| ||||||| |||||| | | ||||||||||||  |||||||||||    
T  24793855 gtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 44203225 - 44203456
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| | |||||||||||||| |||| | |||||||  | | ||||  |        
T  44203225 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcaggggtg 44203324  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
     |||||||| |||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  44203325 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 44203424  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  44203425 cgtgacacgat-tgggaaaatcgtgacacgatt 44203456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 404 - 572
Target Start/End: Complemental strand, 20622712 - 20622544
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcagatc 502  Q
    |||||||||||||||  ||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| ||||||||      ||| |||    
T  20622712 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtggtacgcaaatc 20622613  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||| || ||| | || |||||||||||| ||| |||||| | | | ||||||||||||||||||||||||    
T  20622612 gtggcatgat-ttggaaaatcgtgacacaattgcttcagaggaaggctagtatataaagtgttcttgtgc 20622544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 9986894 - 9987062
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgca--ga 500  Q
    ||||||||||||||| |||||||||||||||||||||   ||||||||| ||||||| ||  | |||||||||||||| |||||||| | | ||||   |    
T  9986894 aaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacggatgcaccaa 9986993  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||  |||||||||||||| ||||  |||| | ||| ||||||| | ||||||||||||||    
T  9986994 tcgtgacacgatct--ggaaatcgtgacacaattttatcagtggagggctagtat-ttaagtgttcttgtgc 9987062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 37070394 - 37070334
Alignment:
Q  293 tgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||    
T  37070394 tgtgttgaaaattggtttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 481
Target Start/End: Original strand, 51764990 - 51765176
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagctt 393  Q
    |||||| | ||||||| ||||||||||| ||||||||||||| ||||||| ||||| || |  |||||||||||||   | ||| ||||||| |  | ||    
T  51764990 tgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgag-ctggttt 51765088  T
Q  394 gctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 481  Q
    ||  |  || ||||||||||||||||||| | |||||||||||||||   ||||||||| ||||||| ||  ||||||||||||||||    
T  51765089 gcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtca 51765176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 460
Target Start/End: Original strand, 19360912 - 19361077
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagctt 393  Q
    |||||| | ||||||||||||||||||| || |||||||||| ||||||| ||||| || |  |||||||||||||   | ||| ||||||| |  | ||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag-ctggttt 19361010  T
Q  394 gctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||  |  || |||||||||||||||||||||||||||||||||||||   ||||||||| |||||||    
T  19361011 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagt 19361077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 292 - 458
Target Start/End: Original strand, 19365765 - 19365931
Alignment:
Q  292 atgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaa 389  Q
    ||||||||| | ||| ||||||||||||||| || |||||||||| ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |      
T  19365765 atgtgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgattttgtgatgccgtgag-ctg 19365862  T
Q  390 gcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 458  Q
    | ||||  |  || |||||||||||||||||||||||||||||||||||||   ||||||||| |||||    
T  19365863 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19365931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 13599018 - 13598967
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  13599018 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 26644373 - 26644448
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||  ||||||| |  ||||| |||||||    
T  26644373 tgttaaaaattggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgat 26644448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 9036010 - 9036277
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacga--tcggagataccgtgagacaagcttgctagaa 400  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  ||||||||||||  |||| | | ||||||| | || ||||  |      
T  9036010 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgg-ggtgccgtgag-ctaggttgcagggt 9036107  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcag 499  Q
    ||||| ||||| ||| || |||  |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    ||||||      ||||    
T  9036108 gcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgttacgcag 9036207  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||| | || ||||||||||||||||||  ||| | | ||||||  ||||||||||||||||||    
T  9036208 atcgtgacacgat-tgggaaaatcgtgacacgatttcaacagaggaagactag--tataaagtgttcttgtgc 9036277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 21536112 - 21536170
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  21536112 tgttgtaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21536170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 21053648 - 21053781
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgca--g 499  Q
    |||||||||||||||  ||||||||||||||||||||  | ||||||||| ||||||| ||  |||||||||||||||| |||||| | | | ||||       
T  21053648 aaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgagacggatgcacca 21053747  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgattt 535  Q
    ||||||||||||||   |||||||||||||||||||    
T  21053748 atcgtgacacgatc--aggaaatcgtgacacgattt 21053781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 404 - 535
Target Start/End: Original strand, 40282067 - 40282200
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcag-aaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgca--g 499  Q
    |||||||||||||||  ||| ||||||||||||||||  | ||||||||| ||||||| ||  |||||||||||||||| |||||||| | | ||||       
T  40282067 aaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgcacca 40282166  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgattt 535  Q
    ||||||||||||||   |||||||||||||||||||    
T  40282167 atcgtgacacgatc--aggaaatcgtgacacgattt 40282200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 24202251 - 24202326
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||||||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgat 24202326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 3282331 - 3282273
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||| |||||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  3282331 tgttgaaatttggcttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 24793673 - 24793723
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  24793673 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 13604095 - 13604152
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt 352  Q
    |||||| | ||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 13604152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 534
Target Start/End: Original strand, 24202360 - 24202470
Alignment:
Q  425 aaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggc---cgttgcagatcgtgacacgatctagggaa 520  Q
    ||||||||||||||||   ||||||||| ||||||||||  |||||||||||||||| | |||||| |   |||| || |||||||||||||||  ||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgtt-caaatcgtgacacgatct--ggaa 24202456  T
Q  521 atcgtgacacgatt 534  Q
    ||||||||||||||    
T  24202457 atcgtgacacgatt 24202470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 20622821 - 20622746
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgat 20622746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 303 - 370
Target Start/End: Original strand, 21053547 - 21053614
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||| ||||||| |||||||||||||    
T  21053547 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgat 21053614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 16124187 - 16124238
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||| || ||||||||||||||||||||||||| |||||||  |||||||    
T  16124187 aattggttttaaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 535
Target Start/End: Original strand, 19361023 - 19361058
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgattt 535  Q
    ||||||||||||||| ||||||||||||||||||||    
T  19361023 atcgtgacacgatcttgggaaatcgtgacacgattt 19361058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 535
Target Start/End: Original strand, 19365879 - 19365914
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgattt 535  Q
    ||||||||||||||| ||||||||||||||||||||    
T  19365879 atcgtgacacgatcttgggaaatcgtgacacgattt 19365914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Original strand, 20762358 - 20762393
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    |||||||||||||| |||||||||||||||||||||    
T  20762358 aatcgtgacacgattttgggaaatcgtgacacgatt 20762393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 13659890 - 13659840
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||  ||||||| ||||||| || |||||    
T  13659890 attggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 13604204 - 13604260
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||||||||||||| ||| | |||||||||| ||||   |||||||||||||||||    
T  13604204 aaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagt 13604260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 225; Significance: 1e-123; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 301 - 647
Target Start/End: Complemental strand, 940 - 595
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||| | |||||||||||||| |||| | ||||||| |||| ||||| ||     
T  940 aaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 841  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||    
T  840 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaactttggttccgttgcaga 741  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagct 600  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||||||||||||       |||||||||||| ||||||||    
T  740 tcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactggtatatattgtgttcttgtgc-ttttttgaagacaaccttaagagagct 642  T
Q  601 taagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  641 taagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 223; Significance: 1e-122; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 302 - 572
Target Start/End: Original strand, 1745 - 2015
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||| |||| ||||| ||||    
T  1745 aattgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgctggaag 1844  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  1845 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaaccttgggaccgttgcagat 1944  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1945 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 223; Significance: 1e-122; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 302 - 572
Target Start/End: Original strand, 148450 - 148720
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  | ||||| |||| ||||| ||||    
T  148450 aattgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgctggaag 148549  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  148550 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaaccttgggaccgttgcagat 148649  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  148650 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 148720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 302 - 648
Target Start/End: Complemental strand, 16880654 - 16880308
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||||||| || |||||||||||||| | ||  | ||||| | || ||||| ||||    
T  16880654 aattgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgatcagggaggcagtgagcctagtttgctggaag 16880555  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  16880554 caaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcagat 16880455  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||        | |  |||||||||||| |||    
T  16880454 cgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgagagaactt 16880355  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  16880354 aagagaggaaacttggagatcaaagatgggatcctttggggtgtgtt 16880308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 302 - 641
Target Start/End: Complemental strand, 16885509 - 16885170
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||||||| || |||||||||||||| | ||  | ||||| | || ||||| ||||    
T  16885509 aattgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgatcagggaggcagtgagcctagtttgctggaag 16885410  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  16885409 caaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgttgcagat 16885310  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||        | |  |||||||||||| |||    
T  16885309 cgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgagagaactt 16885210  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggg 641  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  16885209 aagagaggaaacttggagatcaaagatgggatcctttggg 16885170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 302 - 648
Target Start/End: Original strand, 24260827 - 24261173
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| | ||  | ||||| ||||    ||  |||    
T  24260827 aattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagtaatctgaaag 24260926  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  || |||||| | ||    
T  24260927 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttgaggaccgttgaaaat 24261026  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||        | |  |||||||||||| |||    
T  24261027 cgtgacacgatctagggaaatcgtggcacgatttcatcaggacaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgagagaactt 24261126  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  24261127 aagagaggaaacttggagatcaaagatgggatcctttggggtgtgtt 24261173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 304 - 648
Target Start/End: Original strand, 21811747 - 21812090
Alignment:
Q  304 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagca 403  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||||||  | | ||||  |  |||    
T  21811747 ttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatctgagatgccgtgagcaatgtttgcagggtgca 21811846  T
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| | | ||||||||||| |    
T  21811847 aaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtcaacctggagaccgttgcagattg 21811946  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagcttaa 603  Q
    || |||||||| ||||||||||| ||||||||  |||||||||||||||||||||  ||||||||||||       ||||  |||||| ||||| |||||    
T  21811947 tgtcacgatcttgggaaatcgtggcacgatttactcagggcaggactagtatatattgtgttcttgtgc-ttttttgaagctaaccttaagagaacttaa 21812045  T
Q  604 gagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    |||||||| ||||||| ||||||| ||||||||||||||||||||    
T  21812046 gagagaaagcttggaggtcaaagaggggatcctttggggtgtgtt 21812090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 302 - 572
Target Start/End: Original strand, 24265683 - 24265953
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaag 401  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| | ||  | |||||  ||| ||||| ||||    
T  24265683 aattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaag 24265782  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||    
T  24265783 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcagat 24265882  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  24265883 cgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 24265953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 301 - 572
Target Start/End: Original strand, 31109075 - 31109347
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagatacc-gtgagacaagcttgctaga 399  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||| |  |||||| ||||||   |  | || || ||  ||| ||||  ||    
T  31109075 aaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtgcctgtaagctaagtttgcagga 31109174  T
Q  400 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcag 499  Q
     || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||  |||||||||||||||||    
T  31109175 cgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtctgccttggggccgttgcag 31109274  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  31109275 atcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 31109347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 24023927 - 24024093
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  24023927 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcaacctggggaccgttgcagatcg 24024026  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||||||  |||||||||||||    
T  24024027 tgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatat--agtgttcttgtgc 24024093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 303 - 558
Target Start/End: Complemental strand, 12406850 - 12406595
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagata-ccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |  ||||||| | || |||| ||| |    
T  12406850 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgag-ctagtttgcaagacg 12406752  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||| |||||||| ||    
T  12406751 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaat 12406652  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatata 558  Q
    ||||||||||| | ||||||||||| |||||||||||||| | | ||||||||||||    
T  12406651 cgtgacacgatttggggaaatcgtggcacgatttcttcagaggaagactagtatata 12406595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 4873714 - 4873445
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagata-ccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |  |||| ||| | | ||||  || |    
T  4873714 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagata-gtttgcaggacg 4873616  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||  ||||||| |||||||| ||    
T  4873615 ccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtcttccttgggtccgttgcaaat 4873516  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  4873515 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 4873445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 2058597 - 2058330
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||  ||| | ||||||| | || ||||  || ||    
T  2058597 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttgaggtgccgtgag-ctagtttgcaggacgc 2058499  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcagat 501  Q
     |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||||      ||| ||    
T  2058498 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 2058399  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||  |||||||||| ||||||| |||||| | | | ||||||||||  ||||||||||||    
T  2058398 cgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 2058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 416 - 572
Target Start/End: Complemental strand, 12397385 - 12397229
Alignment:
Q  416 gatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcgtgacacgatcta 515  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||| |||||||| ||||||||||||| |     
T  12397385 gatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaatcgtgacacgatttg 12397286  T
Q  516 gggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| |||||||||||||| | |  |||||||||||  ||||||||||||    
T  12397285 gggaaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgc 12397229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 303 - 481
Target Start/End: Complemental strand, 21640416 - 21640238
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| | || ||||  || |    
T  21640416 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgag-ctagtttgcaggacg 21640318  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 481  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  21640317 ccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 21640238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 294 - 572
Target Start/End: Original strand, 24789425 - 24789702
Alignment:
Q  294 gtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagc 391  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||   | | | ||||||| | ||     
T  24789425 gtgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgag-ctagt 24789522  T
Q  392 ttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttgggg 490  Q
    ||||  |  || |||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||||||| ||||||||     
T  24789523 ttgcagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggt 24789622  T
Q  491 ccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
         ||| ||| ||||||||| |  |||||||||||||||||| |||||| | | | ||||||||||||||||||||||||    
T  24789623 tgtacgcaaatcttgacacgattt--ggaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 24789702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 303 - 534
Target Start/End: Complemental strand, 18392773 - 18392542
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||||||||||||||| | ||||||| |||||||| | |||||||||||||| |||| | |||||||  | | ||||  |  ||    
T  18392773 attgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 18392674  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
    ||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  18392673 aaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 18392574  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  18392573 cgtgacacgat-tgggaaaatcgtgacacgatt 18392542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 303 - 482
Target Start/End: Original strand, 20357035 - 20357214
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   | | | ||||||| | || ||||  || |    
T  20357035 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacg 20357133  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaa 482  Q
    | |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||| ||||||    
T  20357134 ccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaa 20357214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 291 - 572
Target Start/End: Complemental strand, 21646647 - 21646366
Alignment:
Q  291 aatgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagaca 388  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||| ||||||||||||   | ||| ||||||| |     
T  21646647 aatgtgttgacatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggca-tcgtgacacgatttcgtgatgccgtgag-ct 21646550  T
Q  389 agcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttg 487  Q
     | ||||  |  || |||||||||||||||||||| ||||||||||||||||   ||||||||| ||||||||||  ||||||| |||||||| ||||||    
T  21646549 ggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttg 21646450  T
Q  488 gggc---cgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    || |   |||| || |||||| ||||||||  |||||||||||||||||||  |||| | | | ||||||| | ||||||||||||||    
T  21646449 ggacgtacgtt-caaatcgtgccacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtat-ttaagtgttcttgtgc 21646366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 404 - 570
Target Start/End: Original strand, 1533012 - 1533177
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcagatc 502  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| || ||||||||||  |||||||||||||| | |||||||| |     || |||    
T  1533012 aaatcgtgacacgatcttgggaaatcgtgacacgattgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatc 1533111  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgt 570  Q
    ||||||||||||  |||||||||| ||||||| |||||| | | | |||||||||| |||||||||||    
T  1533112 gtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatatagtgttcttgt 1533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 293 - 480
Target Start/End: Original strand, 39730931 - 39731118
Alignment:
Q  293 tgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacga-tcggagataccgtgagacaag 390  Q
    |||||||| | ||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||||| |  | ||| ||||||| |  |    
T  39730931 tgtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgattttgtgatgccgtgag-ctgg 39731028  T
Q  391 cttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     ||||  |  || ||||||||||||||||||| | |||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  39731029 tttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 39731118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 303 - 534
Target Start/End: Complemental strand, 6592914 - 6592683
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |        
T  6592914 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 6592815  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
     |||||||| |||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  6592814 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 6592715  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  6592714 cgtgacacgat-tgggaaaatcgtgacacgatt 6592683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 21983867 - 21983792
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    |||||||||||||    
T  21983867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgat 21983792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 295 - 480
Target Start/End: Original strand, 48408398 - 48408583
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| || |||||||||| ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  | |    
T  48408398 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgattttgtgatgccgtgag-ctggtt 48408495  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || ||||||||||||||||||| |||||||||||||||||   ||||||||| ||||||| |||  ||||||||||||||    
T  48408496 tgcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtc 48408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 20343507 - 20343684
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt-tggcaatcgtgacacgat--cggagataccgtgagacaagcttgctaga 399  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| | ||||| ||||| ||||||||||||  ||| | | ||||||| | || ||||  ||    
T  20343507 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggca-tcgtgacacgatttcgggg-tgccgtgag-ctaggttgccgga 20343603  T
Q  400 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     ||||||||||| ||||||  |||||||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  20343604 tgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 20343684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 303 - 534
Target Start/End: Complemental strand, 6595130 - 6594899
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||| ||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |        
T  6595130 attgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 6595031  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
     |||||||| |||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| ||    
T  6595030 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 6594931  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  6594930 cgtgacacgat-tgggaaaatcgtgacacgatt 6594899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 18414166 - 18414090
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||||||||||||||||||||||||||| |||||||||  ||||||||| ||||||| ||  |||||||||||||||    
T  18414166 aaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18414090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 294 - 480
Target Start/End: Complemental strand, 43504722 - 43504536
Alignment:
Q  294 gtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagc 391  Q
    ||||||| | || |||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  |     
T  43504722 gtgttgagatttagcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctggt 43504625  T
Q  392 ttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||  |  || |||||||||||||||| ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  43504624 ttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 43504536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 47264267 - 47264192
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||| |  |||||||||||||    
T  47264267 tgttgaaatttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgat 47264192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 303 - 480
Target Start/End: Complemental strand, 32060881 - 32060704
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |        
T  32060881 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 32060782  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     |||||||| |||||| | || |||||||||||||||  ||||||||||| ||||||||||  |||||||||||||||    
T  32060781 caaatcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 32060704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 294 - 370
Target Start/End: Complemental strand, 2479961 - 2479885
Alignment:
Q  294 gtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    ||||||||| |||||||||||||||||||||| |||||||||| ||| ||| |||||||| |  |||||||||||||    
T  2479961 gtgttgaaatttggcttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgat 2479885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 18409290 - 18409214
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||| ||||||||||||| ||||||||||||||||||  ||||||||| ||||||| ||  |||||||||||||||    
T  18409290 aaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18409214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 21989531 - 21989456
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||| || |||||    |||||||||||||    
T  21989531 tgttgaaagttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgat 21989456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 44847619 - 44847694
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||| |||||||||||||||||||||  |||||||||| ||||||| |||||||| |  |||||||||||||    
T  44847619 tgttgaaatttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgat 44847694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 534
Target Start/End: Complemental strand, 18389239 - 18389106
Alignment:
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcag 499  Q
    ||||| |||||||||||| | || |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||| | |  |||     
T  18389239 gcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaa 18389140  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||||| | || ||||||||||||||||    
T  18389139 atcgtgacacgat-tgggaaaatcgtgacacgatt 18389106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 293 - 353
Target Start/End: Complemental strand, 80015 - 79955
Alignment:
Q  293 tgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||| | |||||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  80015 tgtgttgtatattggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 1562479 - 1562403
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||||||| |||||| |||| |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||    
T  1562479 aaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 1562403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 25767437 - 25767361
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||||||||||||| |||||||||||||||||||||   ||||||||| ||||||| |||  ||||||||| ||||    
T  25767437 aaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtc 25767361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 369
Target Start/End: Original strand, 1532884 - 1532958
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacga 369  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| |||| ||||||| ||||||||||||    
T  1532884 tgttgatatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 12397485 - 12397418
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||||||||||||||| ||||||||||||| ||||| | |||||||| |  |||||||||||||    
T  12397485 attggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgat 12397418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 597 - 648
Target Start/End: Complemental strand, 19992597 - 19992546
Alignment:
Q  597 agcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  19992597 agcttaagagagaaaacttggaggtcaaagaggggatcctatggggtgtgtt 19992546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 648
Target Start/End: Original strand, 24265985 - 24266052
Alignment:
Q  581 aagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||     |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  24265985 aagacaaccttgagaggttggaagagagataacttggagatcaaagaggggatcctttggggtgtgtt 24266052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 303 - 370
Target Start/End: Complemental strand, 1562580 - 1562513
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    
T  1562580 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgat 1562513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 24023830 - 24023875
Alignment:
Q  307 gcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt 352  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||    
T  24023830 gcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 24023875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 18409399 - 18409324
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||| | ||||||||||||| ||||||  ||||| ||||||| ||||||||||||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggca-tcgtgacacgat 18409324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Complemental strand, 18414275 - 18414200
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||||| | |||||||||||||| |||| ||||||||||||| ||||||| |||| ||||||| |||||| ||||||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggc-atcgtggcacgat 18414200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 46515808 - 46515860
Alignment:
Q  302 aattggcttcaaatttgtggttt-ggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||| |||||| |||||||||||| ||||||| ||||||||    
T  46515808 aattggcttcaaatttatggttttggaagaacagagaaatcgtgacacgattt 46515860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Original strand, 4178461 - 4178496
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    |||||||||||||| |||||||||||||||||||||    
T  4178461 aatcgtgacacgattttgggaaatcgtgacacgatt 4178496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 534
Target Start/End: Complemental strand, 21640313 - 21640279
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||||||| |||||||||||||||||||    
T  21640313 atcgtgacacgatcttgggaaatcgtgacacgatt 21640279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 18390555 - 18390506
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt 352  Q
    |||| ||||||||||||||||| ||||||||| | ||||||| |||||||    
T  18390555 attgtcttcaaatttgtggtttagaagaacagggaaatcgtgccacgatt 18390506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 49092282 - 49092238
Alignment:
Q  309 ttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||| |||||||||||||||| ||| ||| ||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgattt 49092238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 300 - 647
Target Start/End: Original strand, 45347321 - 45347668
Alignment:
Q  300 aaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctaga 399  Q
    ||||||||||||||||||||||| |||||||||| || ||||||| |||||||| | ||||||||||||||  ||||| ||||||| |||| ||||| ||    
T  45347321 aaaattggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgattagagatgccgtgagccaagtttgctgga 45347420  T
Q  400 agcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcag 499  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |||||||||    
T  45347421 tgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcag 45347520  T
Q  500 atcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagc 599  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||  ||||||||||||       |||||||||||| |||||||    
T  45347521 atcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttcttgtgc-ttttttgaagacaaccttaagagagc 45347619  T
Q  600 ttaagagagaaaa-cttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  45347620 ttaagagagaaaatcttggagatcaaagaggggatcctatggggtgtgt 45347668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 301 - 645
Target Start/End: Complemental strand, 18856304 - 18855961
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||| | |||||||||||||| |||| | ||||||| |||| ||||| ||     
T  18856304 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 18856205  T
Q  401 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||    
T  18856204 gcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcaga 18856105  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagct 600  Q
    |||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||||  ||||||||||||       |||||||||||| ||||||||    
T  18856104 tcgtgacatgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc-ttttttgaagacaaccttaagagagct 18856006  T
Q  601 taagagagaaaacttggagatcaaagatgggatcctttggggtgt 645  Q
    ||||||||||| ||||||||||||||| |||| ||| ||||||||    
T  18856005 taagagagaaatcttggagatcaaagaggggagcctatggggtgt 18855961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 303 - 647
Target Start/End: Complemental strand, 5733240 - 5732897
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| || |||||||||| |||| || |||||||| |  |||||||||||||   | | | ||||||  |||| ||||  || |    
T  5733240 attggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacg 5733141  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||    
T  5733140 ccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 5733041  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  |||||||||||        |||||||||||| |||||||||    
T  5733040 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtg--ttttttgaagacaaccttaagagagctt 5732943  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||    
T  5732942 aagagagaaaacttggagatcaaagaggggatcctatggggtgtgt 5732897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 359 - 647
Target Start/End: Original strand, 45356861 - 45357148
Alignment:
Q  359 tcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 458  Q
    ||||||||||||  ||||| ||||||| |||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45356861 tcgtgacacgatttgagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 45356960  T
Q  459 gtatctctgataaggactggtcaaccttggggccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatata 558  Q
    ||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  45356961 gtatcactgataaggactggtcaacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttctggggaggactagtatata 45357060  T
Q  559 aagtgttcttgtgcnnnnnnngaagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
      ||||||||||||       |||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||    
T  45357061 ttgtgttcttgtgc-ttttttgaagacaaccttaagagagcttaagagagaaatcttggagatcaaagaggggatcctatggggtgtgt 45357148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 303 - 647
Target Start/End: Complemental strand, 3814598 - 3814256
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagat-accgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  | ||||| || |||| |||| ||| |    
T  3814598 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaag-caagtttgcaagacg 3814500  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |  |||||||||||    
T  3814499 ccaaatcgtgtcacgat-ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgagaaccgttgcagat 3814401  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcnnnnnnngaagacaaccttgagagagctt 601  Q
    ||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||       ||||||||||||  ||||||||    
T  3814400 cgtgacaagatctagggaaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgc-ttttttgaagacaaccttaggagagctt 3814302  T
Q  602 aagagagaaaacttggagatcaaagatgggatcctttggggtgtgt 647  Q
    ||||||||||||||||| |||||||  |||||||| ||||||||||    
T  3814301 aagagagaaaacttggacatcaaaggagggatcctatggggtgtgt 3814256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 9228693 - 9228962
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagata-ccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |  ||||||| |  | ||||  || |    
T  9228693 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgag-ctcgtttgcaggacg 9228791  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||| |||||||||||    
T  9228792 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagat 9228891  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||||||||||||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  9228892 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 9228962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 303 - 568
Target Start/End: Original strand, 9223906 - 9224171
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagata-ccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |  ||||||| | || ||||  || |    
T  9223906 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgag-ctagtttgcaggacg 9224004  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||| |||||||||||    
T  9224005 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagat 9224104  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttctt 568  Q
    ||||||||||||||||||||||||| ||| |||||||||| | | ||||||||||||  ||||||||    
T  9224105 cgtgacacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttctt 9224171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 56141518 - 56141788
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatc-ggagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||  ||||    |||||| | || ||||  || |    
T  56141518 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgag-ctagtttgcaggacg 56141616  T
Q  402 c-aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcaga 500  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| | | |||| |    
T  56141617 ccaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagatgcaaa 56141716  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||| ||||||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  56141717 tcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 56141788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 404 - 572
Target Start/End: Original strand, 18712363 - 18712531
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| |||||| ||||||    
T  18712363 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgaagatcg 18712462  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||| ||||||| |||||||| |||||||||||||||| | ||||||||||||  ||||||||||||    
T  18712463 tgacacaatctaggaaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 18712531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 24742570 - 24742302
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcg-gagataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   ||| | ||||||| | || ||||  || |    
T  24742570 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgag-ctagtttgcaggacg 24742472  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggccgttgcaga 500  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||| ||  | |  ||| |    
T  24742471 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaa 24742372  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||| ||||||||  ||||||||||||||||||||||||| | | ||||||||||||  ||||||||||||    
T  24742371 tcgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 24742302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 303 - 572
Target Start/End: Complemental strand, 51521043 - 51520775
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcgga-gataccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   | |   ||||||| | || ||||  || |    
T  51521043 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgag-ctagtttgcaggacg 51520945  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||| || |||||||| | |  ||| ||    
T  51520944 ccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatctaccttgggtcagacgcaaat 51520845  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| | ||||||||||| ||| ||| |||||| | | | ||||||||||  ||||||||||||    
T  51520844 cgtgacacgat-ttgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttcttgtgc 51520775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 301 - 411
Target Start/End: Complemental strand, 18860516 - 18860406
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaa 400  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||| | |||||||||||||| |||| | ||||||| |||| ||||| ||     
T  18860516 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctggat 18860417  T
Q  401 gcaaaatcgtg 411  Q
    |||||||||||    
T  18860416 gcaaaatcgtg 18860406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 404 - 481
Target Start/End: Complemental strand, 29761150 - 29761073
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 481  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  29761150 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 29761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 294 - 480
Target Start/End: Original strand, 28467976 - 28468162
Alignment:
Q  294 gtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagc 391  Q
    ||||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| |||| |||||||   | ||| ||||||| |  |     
T  28467976 gtgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggca-tcgtaacacgattttgtgatgccgtgag-ctggt 28468073  T
Q  392 ttgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    ||||  |  || |||||||||||||||||||| ||||||||||||||||   ||||||||| ||||||| ||| |||||||||||||||    
T  28468074 ttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtc 28468162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 308 - 534
Target Start/End: Original strand, 7122279 - 7122505
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |     ||||    
T  7122279 cttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 7122378  T
Q  408 cgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagatcgtga 506  Q
    |||| ||||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| |||||||    
T  7122379 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 7122478  T
Q  507 cacgatctagggaaatcgtgacacgatt 534  Q
    |||||| | || ||||||||||||||||    
T  7122479 cacgat-tgggaaaatcgtgacacgatt 7122505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 295 - 572
Target Start/End: Complemental strand, 13992879 - 13992602
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||   | |||  |||||| |  | |    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgtcgtgag-ctggtt 13992782  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggggc 491  Q
    |||  |  || ||||||||||||||| |||||||||||||||||||||   ||||||||| ||||||| |   |||||||||||||||| |||||| | |    
T  13992781 tgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgac 13992682  T
Q  492 ---cgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
       |||  || |||||||||||||||  |||||||||||||||||||  |||| | | ||||||||| | ||||||||||||||    
T  13992681 gtacgtatca-atcgtgacacgatct--ggaaatcgtgacacgattttatcagtggaagactagtat-ttaagtgttcttgtgc 13992602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 5143867 - 5143803
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaat 359  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||    
T  5143867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgcaat 5143803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 308 - 480
Target Start/End: Original strand, 7124501 - 7124673
Alignment:
Q  308 cttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagcaaaat 407  Q
    ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |     ||||    
T  7124501 cttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 7124600  T
Q  408 cgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||| ||||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  7124601 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 8392989 - 8393256
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |        
T  8392989 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 8393088  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
     |||||||| |||||| | || ||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    ||||||      ||||||    
T  8393089 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtcttttcttgggtggtacgcagat 8393188  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| | |||||||||||||||||||||  ||| | | | ||||  ||||||||||||||||||    
T  8393189 cgtgacacgat-ttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaagtgttcttgtgc 8393256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 8689038 - 8689094
Alignment:
Q  297 ttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  8689038 ttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8689094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 5148302 - 5148244
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  5148302 tgttgaaaattggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattt 5148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 8395198 - 8395465
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |        
T  8395198 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 8395297  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
     |||||||  |||||| | || |||||||||||| || |||||||||||| ||||||||||  |||||||||||||||    ||||||      ||||||    
T  8395298 caaatcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtcgtttcttgggtggtacgcagat 8395397  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    ||||||||||| | |||||||||||||||||||||  ||| | | | ||||  ||||||||||||||||||    
T  8395398 cgtgacacgat-ttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaagtgttcttgtgc 8395465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 31495902 - 31495717
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  | |    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctggtt 31495805  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || |||||||||||||||  ||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  31495804 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 31495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 6742888 - 6742946
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||| ||||||||    
T  6742888 tgttgtaaattggcttcaaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 16628353 - 16628403
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  16628353 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 38151918 - 38151968
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 3778165 - 3778116
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt 352  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  3778165 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Original strand, 5268698 - 5268749
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || |||||    
T  5268698 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggattt 5268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 353
Target Start/End: Original strand, 16622765 - 16622824
Alignment:
Q  294 gtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||| | |||||||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  16622765 gtgttgtatattggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 5135656 - 5135834
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| |||||||||||||| |||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |        
T  5135656 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 5135755  T
Q  403 aaaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||| ||||    
T  5135756 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5135834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 480
Target Start/End: Original strand, 5137882 - 5138060
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| |||||||||||||| |||||||||||| | ||||||| |||||||| |  |||||||| ||||    ||| |||||||  | | ||||  |        
T  5137882 attgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 5137981  T
Q  403 aaaatcgtgacacgatcttgggaaa-tcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     |||||||| |||||| |||||||| ||||||||||||  ||||||||||| ||||||||||  |||||||||| ||||    
T  5137982 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5138060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 5396164 - 5396221
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||| ||||||||    
T  5396164 tgttgaaaattagcttcaaatttgtggtttgaaagaacagagaaatcgtg-cacgattt 5396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 10047982 - 10047932
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 54867796 - 54867745
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||||||| |||| | ||||| ||||||||    
T  54867796 aattggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 353
Target Start/End: Complemental strand, 29761228 - 29761182
Alignment:
Q  307 gcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  29761228 gcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 36314703 - 36314761
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||| ||||| |||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  36314703 tgttgtaaattagcttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 36328912 - 36328970
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||| ||||| |||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  36328912 tgttgtaaattagcttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 31985127 - 31985202
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    |||||| | ||||||||||||||||| | || |||||||||| ||||||| |||| ||||||| |||||||||||||    
T  31985127 tgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgat 31985202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Complemental strand, 5370557 - 5370522
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    |||||||||||||| |||||||||||||||||||||    
T  5370557 aatcgtgacacgattttgggaaatcgtgacacgatt 5370522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 9194215 - 9194164
Alignment:
Q  303 attggcttcaaatttgtgg-tttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||| ||||||||    
T  9194215 attggcttcaaatttgtggttttggaagaacagagaaattgtgacacgattt 9194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 454
Target Start/End: Original strand, 8689078 - 8689128
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctgg 454  Q
    ||||||||||||||| |||||||| ||||||||||||   |||||||||||    
T  8689078 aaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgctgg 8689128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 572
Target Start/End: Complemental strand, 29761055 - 29761002
Alignment:
Q  519 aaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||| |||||||||||||| | | ||||||||||||  ||||||||||||    
T  29761055 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 29761002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 186; Significance: 1e-100; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 176457 - 176726
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| | ||  | |||||  ||| ||||| |||||    
T  176457 attgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaagc 176556  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatc 502  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  176557 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaactttgggtccgttgcagatc 176656  T
Q  503 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  176657 gtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgc 176726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 581 - 648
Target Start/End: Original strand, 176760 - 176827
Alignment:
Q  581 aagacaaccttgagagagcttaagagagaaaacttggagatcaaagatgggatcctttggggtgtgtt 648  Q
    ||||||||||||||||     |||||||| ||||||||||||||||| ||||||||||||||||||||    
T  176760 aagacaaccttgagaggttggaagagagataacttggagatcaaagaggggatcctttggggtgtgtt 176827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 123; Significance: 7e-63; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 303 - 572
Target Start/End: Original strand, 3344 - 3613
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagata-ccgtgagacaagcttgctagaag 401  Q
    |||||||||||||||||||| |||||||| |||| ||||||| |||||||| |  |||||||||||||   |  |  ||||||| | || |||   || |    
T  3344 attggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgag-ctagtttgaaggacg 3442  T
Q  402 caaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagat 501  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||| ||| |||||||||||    
T  3443 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtcaacctggggaccgttgcagat 3542  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||  || |||||||||    
T  3543 cgtgacacgatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgc 3613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 113; Significance: 7e-57; HSPs: 2)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 404 - 568
Target Start/End: Original strand, 34662 - 34826
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgcagatcg 503  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||| |||||||| |||||||||||||    
T  34662 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagatcg 34761  T
Q  504 tgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttctt 568  Q
    ||||||||||||||||||||||| ||| |||||||||| | | ||||||||||||  ||||||||    
T  34762 tgacacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttctt 34826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 303 - 367
Target Start/End: Original strand, 34561 - 34625
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacac 367  Q
    |||||||||||||||||||| ||||||||||||| ||||||| |||||||| |  ||||||||||    
T  34561 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacac 34625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 404 - 497
Target Start/End: Complemental strand, 8184 - 8091
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttggggccgttgc 497  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| |||||||    
T  8184 aaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgc 8091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 8266 - 8216
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||||||    
T  8266 attggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 295 - 480
Target Start/End: Original strand, 21939 - 22124
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | |||| |||||||||||||| ||||||||||||| ||||| | || || ||||||| ||||||||||||   ||| | ||||||| | || |    
T  21939 tgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggca-tcgtgacacgatttcgaggtgccgtgag-ctagtt 22036  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  || || |||||||||||||||||||||||||||||||||||||   ||||||||| |||||||||| ||||||||||| ||||    
T  22037 tgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtc 22124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 534
Target Start/End: Original strand, 22050 - 22084
Alignment:
Q  500 atcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||||||| |||||||||||||||||||    
T  22050 atcgtgacacgatcttgggaaatcgtgacacgatt 22084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 303 - 480
Target Start/End: Complemental strand, 4303 - 4126
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| | ||||||||||||||   || | |||||||  | | ||||  |        
T  4303 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattttaggtgccgtgagctagggttgcaggggtg 4204  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
     |||||||| ||||||  ||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||||||    
T  4203 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 4126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 295 - 480
Target Start/End: Original strand, 17431 - 17616
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcg-gagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  | |    
T  17431 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctggtt 17528  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || |||||||||||||||||||||||||||||||| ||||   ||||||||| ||||||||||  ||||||||| |||||    
T  17529 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtc 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 303 - 534
Target Start/End: Original strand, 5866 - 6098
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| | | |||||||||||| |||| | |||||||  | | ||||  |  ||    
T  5866 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgattggaggtgccgtgagctagggttgcagggtgc 5965  T
Q  403 aaaatcgtgacacgatcttgg-gaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcaga 500  Q
    ||| ||||| ||||||  |||  |||||||||||||||   |||||||||| ||||||||||  |||||||||||||||   ||||||| | |  ||| |    
T  5966 aaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 6065  T
Q  501 tcgtgacacgatctagggaaatcgtgacacgatt 534  Q
    |||||||||||| | || ||||||||||||||||    
T  6066 tcgtgacacgat-tgggaaaatcgtgacacgatt 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 303 - 534
Target Start/End: Complemental strand, 3178 - 2947
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagataccgtgagacaagcttgctagaagc 402  Q
    |||| ||||||||||||||| ||||||||||| | ||||||| |||||||| |  |||||||||||||    ||| |||||||  | | ||||  |        
T  3178 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 3079  T
Q  403 aaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggccgttgcagat 501  Q
     |||||||| ||||||  ||||||||||||||||||| |||||||||||| |||||||||   |||||||||||||||   ||||||| | |  ||| ||    
T  3078 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggacggacgcaaat 2979  T
Q  502 cgtgacacgatctagggaaatcgtgacacgatt 534  Q
    ||||||||||| | || ||||||||||||||||    
T  2978 cgtgacacgat-tgggaaaatcgtgacacgatt 2947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 301 - 370
Target Start/End: Original strand, 1714 - 1783
Alignment:
Q  301 aaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| |||||||| | ||||||||||||||    
T  1714 aaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgat 1783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 295 - 572
Target Start/End: Complemental strand, 11753 - 11477
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacgatcgga-gataccgtgagacaagct 392  Q
    |||||| | ||||||||||| ||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||   | ||| ||||||| |  | |    
T  11753 tgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcatgatgccgtgag-ctggtt 11656  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc-aaccttggggc 491  Q
    |||  |  || ||||||||||||||| |||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||  |||||||| |    
T  11655 tgcagggtgccaaatcgtgacacgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggac 11557  T
Q  492 cgttgca--gatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 572  Q
        |||   |||||||||||||||  |||||||||||||||||||  |||| | | | ||||||| | ||||||||||||||    
T  11556 gtacgcaccaatcgtgacacgatct--ggaaatcgtgacacgattttatcagtggaaggctagtat-ttaagtgttcttgtgc 11477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 295 - 480
Target Start/End: Complemental strand, 9308 - 9124
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacga-tttggcaatcgtgacacga-tcggagataccgtgagacaagct 392  Q
    |||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||| |  | ||| ||||||| |  | |    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggca-tcgtgacacgatttcgtgatgccgtgag-ctggtt 9211  T
Q  393 tgctagaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtc 480  Q
    |||  |  || ||||||||||| ||| |||||||||||||||||||||   ||||||||| ||||||| ||  |||||||||||||||    
T  9210 tgcagggtgccaaatcgtgacatgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 9124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 5)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 6303 - 6252
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6303 aattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

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Target: scaffold0006; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 3111 - 3060
Alignment:
Q  302 aattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||||||||||||||||||||||| |||| || ||||||||    
T  3111 aattggcttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

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Target: scaffold0006; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 295 - 352
Target Start/End: Original strand, 132752 - 132809
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt 352  Q
    |||||| | ||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 132809  T

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Target: scaffold0006; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 149651 - 149601
Alignment:
Q  303 attggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||||||||||||||||||||||  ||||||| ||||||| || |||||    
T  149651 attggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 149601  T

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Target: scaffold0006; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 132861 - 132917
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||||||||||||| ||| | |||||||||| ||||   |||||||||||||||||    
T  132861 aaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagt 132917  T

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Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 36324 - 36370
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatc 341  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  36324 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatc 36370  T

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Target: scaffold0087; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 43434 - 43509
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatt-tggcaatcgtgacacgat 370  Q
    ||||| || |||||||||||||| ||||||||||||| |||| ||||||| ||||||| |||| |||||||||||||    
T  43434 tgttggaatttggcttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggc-atcgtgacacgat 43509  T

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Target: scaffold0140 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 290 - 370
Target Start/End: Original strand, 7906 - 7986
Alignment:
Q  290 aaatgtgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 370  Q
    ||||||||||| | ||||||||||||||||||| || |||||||||| ||||||| |||| ||||||| |||||||||||||    
T  7906 aaatgtgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggc-atcgtgacacgat 7986  T

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Target: scaffold0510 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 1083 - 1158
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgat 370  Q
    |||||||| ||| |||||||||||||||||| |||||||||  ||||||| |||||||| |  |||||||||||||    
T  1083 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgat 1158  T

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Target: scaffold0510; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 1192 - 1248
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 460  Q
    ||||||||  ||||| ||| |||||||||||||||||   |||||||||||||||||    
T  1192 aaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 1248  T

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Target: scaffold0098 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 353
Target Start/End: Complemental strand, 45804 - 45746
Alignment:
Q  295 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    |||||| | ||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  45804 tgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 45746  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 353
Target Start/End: Complemental strand, 86204 - 86153
Alignment:
Q  303 attggcttcaaattt-gtggtttggaagaacagaggaatcgtgtcacgattt 353  Q
    ||||||||||||||| |||||||||||||| |||| ||||||| ||||||||    
T  86204 attggcttcaaattttgtggtttggaagaatagagaaatcgtgacacgattt 86153  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 440
Target Start/End: Original strand, 434218 - 434253
Alignment:
Q  405 aatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    |||||||||||||| |||||||||||||||||||||    
T  434218 aatcgtgacacgattttgggaaatcgtgacacgatt 434253  T

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Target: scaffold1519 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 440
Target Start/End: Original strand, 591 - 627
Alignment:
Q  404 aaatcgtgacacgatcttgggaaatcgtgacacgatt 440  Q
    ||||||||||||||||||| | |||||||||||||||    
T  591 aaatcgtgacacgatcttgaggaatcgtgacacgatt 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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