View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9036_low_7 (Length: 604)
Name: NF9036_low_7
Description: NF9036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9036_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 589; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 589; E-Value: 0
Query Start/End: Original strand, 1 - 589
Target Start/End: Original strand, 44856426 - 44857014
Alignment:
| Q |
1 |
atatttgtaaacttggatgaactgaattagccaacaaatgaaccatccaaacactctttgaagcaacaaagaaagcttgcaatagtggttcagaccaagc |
100 |
Q |
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| T |
44856426 |
atatttgtaaacttggatgaactgaattagccaacaaatgaaccatccaaacactctttgaagcaacaaagaaagcttgcaatagtggttcagaccaagc |
44856525 |
T |
|
| Q |
101 |
cctattccaacccaacatagcaacaatttcactcatttttctatcacaaaatctactaaaatcttcactaaaatgtcttgtccctttgctcaaaacttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856526 |
cctattccaacccaacatagcaacaatttcactcatttttctatcacaaaatctactaaaatcttcactaaaatgtcttgtccctttgctcaaaacttca |
44856625 |
T |
|
| Q |
201 |
tcccaagtcaacccatgtatcatgttgaatgaagcaaaacttgattcacacctttccatagggttcaatatcctattacaagcattcttttgaaacccta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856626 |
tcccaagtcaacccatgtatcatgttgaatgaagcaaaacttgattcacacctttccatagggttcaatatcctattacaagcattcttttgaaacccta |
44856725 |
T |
|
| Q |
301 |
ttgactcaaaatcctcaaaaaatgtcttgttcaaaagtgcttccaagtaaaaaagcaaacttcttggattctttgaaaaagatatttttatatcataagg |
400 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856726 |
ttgactcaaaatcctcaaaaaatgtcttgttcaaaagtgcttccaagtaaaaaagcaaacttcttggattctttgaaaaagatatttttatatcataagg |
44856825 |
T |
|
| Q |
401 |
ttgtaaaagtaaagaaactttttcatacactttgcttcctgtgtgtctaagttgcattgttaatgaacgacttagaagtctcactgaagatcttgcttca |
500 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856826 |
ttgtaaaagtaaagaaactttttcatacactttgcttcctgtgtgtctaagttgcattgttaatgaacgacttagaagtctcactgaagatcttgcttca |
44856925 |
T |
|
| Q |
501 |
gaaacagccaccaagaaatgttgtacaacgttgtcattgtcttgaacatgatgatgaaaattcttctgagcaacgacattagaagaacc |
589 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856926 |
gaaacagccaccaagaaatgttgtacaacgttgtcattgtcttgaacatgatgatgaaaattcttctgagcaacgacattagaagaacc |
44857014 |
T |
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