View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9041_low_15 (Length: 366)

Name: NF9041_low_15
Description: NF9041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9041_low_15
NF9041_low_15
[»] chr3 (49 HSPs)
chr3 (1-351)||(26492921-26493264)
chr3 (3-56)||(28306127-28306180)
chr3 (2-58)||(22232794-22232850)
chr3 (2-55)||(31337450-31337503)
chr3 (2-56)||(1816551-1816605)
chr3 (1-57)||(19679375-19679431)
chr3 (5-57)||(23249529-23249581)
chr3 (5-57)||(41452494-41452546)
chr3 (10-58)||(43875624-43875672)
chr3 (2-57)||(2201096-2201151)
chr3 (2-57)||(14145880-14145935)
chr3 (2-57)||(24887330-24887385)
chr3 (2-57)||(36646429-36646484)
chr3 (2-57)||(38462249-38462304)
chr3 (2-57)||(40122800-40122854)
chr3 (3-57)||(33965536-33965592)
chr3 (5-57)||(52618974-52619026)
chr3 (2-53)||(10101527-10101578)
chr3 (2-53)||(10212452-10212503)
chr3 (2-57)||(21872318-21872373)
chr3 (2-57)||(25453906-25453961)
chr3 (5-52)||(31713959-31714006)
chr3 (7-50)||(51197790-51197833)
chr3 (2-52)||(12923377-12923427)
chr3 (2-56)||(22031164-22031218)
chr3 (2-56)||(23315594-23315648)
chr3 (2-56)||(24235731-24235785)
chr3 (3-57)||(33405214-33405268)
chr3 (2-32)||(49586988-49587018)
chr3 (4-57)||(1217847-1217900)
chr3 (2-51)||(2197804-2197853)
chr3 (9-58)||(19679806-19679855)
chr3 (5-57)||(20502115-20502168)
chr3 (4-57)||(21367637-21367690)
chr3 (15-56)||(22343589-22343630)
chr3 (2-43)||(26599146-26599187)
chr3 (5-46)||(28779327-28779368)
chr3 (18-59)||(29114073-29114114)
chr3 (19-56)||(41057023-41057060)
chr3 (19-56)||(52597673-52597710)
chr3 (2-53)||(2863784-2863833)
chr3 (2-54)||(3467438-3467490)
chr3 (10-58)||(16990207-16990255)
chr3 (2-38)||(23785223-23785259)
chr3 (2-58)||(27792840-27792896)
chr3 (28-56)||(35057909-35057937)
chr3 (2-42)||(42745014-42745054)
chr3 (1-41)||(47131957-47131997)
chr3 (2-54)||(48397614-48397666)
[»] chr2 (44 HSPs)
chr2 (2-58)||(37053562-37053618)
chr2 (2-58)||(5043606-5043662)
chr2 (2-58)||(11513866-11513922)
chr2 (2-57)||(14666516-14666571)
chr2 (1-57)||(3673774-3673830)
chr2 (2-58)||(10143140-10143196)
chr2 (2-58)||(18962084-18962140)
chr2 (2-58)||(33942118-33942174)
chr2 (10-57)||(37276722-37276769)
chr2 (2-51)||(35539691-35539740)
chr2 (5-57)||(1625871-1625923)
chr2 (2-38)||(33192161-33192197)
chr2 (2-57)||(17952748-17952803)
chr2 (2-57)||(36863672-36863727)
chr2 (2-56)||(15377733-15377787)
chr2 (6-60)||(43205281-43205335)
chr2 (5-57)||(5867238-5867290)
chr2 (2-78)||(6988083-6988159)
chr2 (2-57)||(7103529-7103585)
chr2 (5-57)||(18066099-18066151)
chr2 (4-56)||(33526015-33526067)
chr2 (1-49)||(33944572-33944620)
chr2 (4-52)||(35755554-35755602)
chr2 (2-54)||(40145430-40145482)
chr2 (2-78)||(43141839-43141915)
chr2 (2-45)||(1160803-1160846)
chr2 (2-57)||(28803553-28803608)
chr2 (2-57)||(29300613-29300668)
chr2 (2-57)||(29935971-29936026)
chr2 (2-41)||(31740022-31740061)
chr2 (2-53)||(33256708-33256759)
chr2 (2-57)||(34054948-34055003)
chr2 (2-57)||(37292394-37292449)
chr2 (2-56)||(42817424-42817478)
chr2 (2-55)||(43299451-43299505)
chr2 (1-54)||(9551546-9551599)
chr2 (5-57)||(14277940-14277993)
chr2 (7-56)||(30537575-30537624)
chr2 (2-50)||(4550745-4550793)
chr2 (2-54)||(28039382-28039434)
chr2 (2-58)||(37766766-37766822)
chr2 (21-57)||(39983329-39983365)
chr2 (2-38)||(41851969-41852005)
chr2 (21-53)||(42621618-42621650)
[»] chr5 (40 HSPs)
chr5 (2-57)||(41277397-41277452)
chr5 (2-57)||(14295474-14295529)
chr5 (2-51)||(32059642-32059691)
chr5 (2-54)||(12407711-12407763)
chr5 (2-54)||(14599353-14599405)
chr5 (2-41)||(583836-583875)
chr5 (2-57)||(4855666-4855721)
chr5 (2-57)||(26516368-26516423)
chr5 (1-56)||(27772686-27772741)
chr5 (7-58)||(38728347-38728398)
chr5 (2-52)||(36539714-36539764)
chr5 (4-58)||(41016149-41016203)
chr5 (5-57)||(18543243-18543296)
chr5 (2-70)||(26209447-26209516)
chr5 (2-39)||(28586831-28586868)
chr5 (2-46)||(2933709-2933753)
chr5 (2-38)||(39750111-39750147)
chr5 (2-54)||(39823171-39823223)
chr5 (6-57)||(8985633-8985684)
chr5 (2-53)||(10272482-10272533)
chr5 (2-57)||(12975315-12975370)
chr5 (2-57)||(15003561-15003616)
chr5 (5-56)||(18704084-18704135)
chr5 (1-52)||(33234328-33234379)
chr5 (2-57)||(34205207-34205262)
chr5 (2-41)||(35135725-35135764)
chr5 (8-55)||(40159793-40159840)
chr5 (2-52)||(9703292-9703342)
chr5 (5-55)||(14331325-14331375)
chr5 (2-52)||(19177447-19177497)
chr5 (4-57)||(14257435-14257488)
chr5 (7-56)||(19138767-19138816)
chr5 (4-57)||(41957498-41957551)
chr5 (8-56)||(9634746-9634794)
chr5 (2-58)||(32172621-32172677)
chr5 (2-58)||(34245692-34245748)
chr5 (2-34)||(37063144-37063176)
chr5 (2-46)||(38831514-38831558)
chr5 (1-37)||(39809881-39809917)
chr5 (4-52)||(41017697-41017745)
[»] chr4 (53 HSPs)
chr4 (2-58)||(54325083-54325139)
chr4 (2-57)||(2996541-2996596)
chr4 (6-57)||(10192256-10192307)
chr4 (5-55)||(55870390-55870440)
chr4 (5-58)||(927447-927500)
chr4 (4-57)||(2980513-2980566)
chr4 (2-51)||(22471299-22471348)
chr4 (2-55)||(30207620-30207672)
chr4 (2-43)||(46013361-46013402)
chr4 (2-55)||(49085957-49086010)
chr4 (1-57)||(23819056-23819112)
chr4 (2-58)||(29194449-29194505)
chr4 (2-54)||(31038917-31038969)
chr4 (13-57)||(46415839-46415883)
chr4 (1-57)||(49219106-49219162)
chr4 (2-57)||(927260-927315)
chr4 (2-57)||(3175919-3175974)
chr4 (2-57)||(19429535-19429590)
chr4 (1-56)||(24444005-24444060)
chr4 (2-57)||(44319917-44319972)
chr4 (2-57)||(51630079-51630134)
chr4 (2-56)||(437480-437534)
chr4 (3-56)||(7368103-7368157)
chr4 (2-55)||(13949893-13949946)
chr4 (2-51)||(24929461-24929510)
chr4 (2-47)||(42321936-42321981)
chr4 (2-43)||(46247186-46247227)
chr4 (2-55)||(46796986-46797039)
chr4 (1-57)||(21157735-21157791)
chr4 (2-58)||(28581956-28582012)
chr4 (13-57)||(42866047-42866091)
chr4 (3-54)||(8151789-8151840)
chr4 (4-55)||(10812478-10812529)
chr4 (2-57)||(18630648-18630703)
chr4 (2-57)||(35290234-35290289)
chr4 (2-57)||(52735090-52735145)
chr4 (2-53)||(53626744-53626795)
chr4 (2-56)||(4071850-4071904)
chr4 (9-55)||(11698934-11698980)
chr4 (2-56)||(17884036-17884090)
chr4 (6-56)||(44138712-44138762)
chr4 (4-57)||(18628590-18628643)
chr4 (16-57)||(36048515-36048556)
chr4 (16-57)||(36722716-36722757)
chr4 (5-58)||(53155234-53155287)
chr4 (3-56)||(55372390-55372443)
chr4 (3-51)||(19691376-19691424)
chr4 (3-51)||(19701961-19702009)
chr4 (3-39)||(21952930-21952966)
chr4 (4-56)||(21953243-21953295)
chr4 (2-54)||(24160545-24160597)
chr4 (2-46)||(25434518-25434562)
chr4 (5-57)||(30877169-30877221)
[»] chr8 (40 HSPs)
chr8 (2-56)||(6864507-6864561)
chr8 (5-56)||(11784697-11784748)
chr8 (2-57)||(34770860-34770915)
chr8 (3-57)||(29973050-29973104)
chr8 (8-57)||(10075598-10075647)
chr8 (2-57)||(27728068-27728123)
chr8 (2-57)||(28784842-28784897)
chr8 (1-56)||(35869804-35869859)
chr8 (6-56)||(11795064-11795114)
chr8 (2-56)||(33209268-33209322)
chr8 (4-57)||(9834836-9834889)
chr8 (5-58)||(13561358-13561411)
chr8 (1-58)||(34213575-34213632)
chr8 (5-57)||(30013189-30013241)
chr8 (1-52)||(5071019-5071070)
chr8 (2-57)||(6509350-6509405)
chr8 (2-57)||(9836901-9836956)
chr8 (3-50)||(11764050-11764097)
chr8 (1-56)||(28769387-28769442)
chr8 (5-60)||(37461113-37461168)
chr8 (1-52)||(38260499-38260550)
chr8 (9-52)||(43704430-43704473)
chr8 (2-52)||(12361160-12361210)
chr8 (3-53)||(33912102-33912152)
chr8 (4-57)||(8062494-8062547)
chr8 (8-57)||(29342259-29342308)
chr8 (3-56)||(30600397-30600450)
chr8 (2-58)||(35298523-35298580)
chr8 (2-58)||(1470902-1470958)
chr8 (2-78)||(2093247-2093323)
chr8 (4-36)||(6875328-6875360)
chr8 (11-55)||(7645955-7645999)
chr8 (3-39)||(7878551-7878587)
chr8 (10-58)||(10460579-10460627)
chr8 (7-39)||(25872471-25872503)
chr8 (5-57)||(26284842-26284894)
chr8 (2-78)||(30191167-30191243)
chr8 (1-57)||(31804501-31804557)
chr8 (2-38)||(34788493-34788529)
chr8 (2-54)||(39551259-39551311)
[»] chr7 (35 HSPs)
chr7 (2-56)||(28340444-28340498)
chr7 (2-55)||(5006558-5006611)
chr7 (10-58)||(27481340-27481388)
chr7 (2-57)||(30456497-30456552)
chr7 (2-57)||(31338476-31338531)
chr7 (2-55)||(1417232-1417285)
chr7 (1-54)||(17989073-17989126)
chr7 (6-54)||(9527140-9527188)
chr7 (6-57)||(5369738-5369789)
chr7 (2-57)||(29363486-29363541)
chr7 (2-44)||(35536075-35536117)
chr7 (2-35)||(45593788-45593821)
chr7 (2-59)||(45777216-45777273)
chr7 (5-57)||(27492766-27492818)
chr7 (3-50)||(46082002-46082050)
chr7 (2-50)||(49060508-49060556)
chr7 (2-57)||(3468582-3468637)
chr7 (2-57)||(11208417-11208472)
chr7 (2-57)||(12110328-12110383)
chr7 (2-57)||(24363648-24363703)
chr7 (2-57)||(27548231-27548286)
chr7 (5-56)||(44821930-44821981)
chr7 (2-57)||(47046155-47046210)
chr7 (1-34)||(819830-819863)
chr7 (4-57)||(18516296-18516349)
chr7 (2-39)||(21076992-21077029)
chr7 (2-46)||(946720-946764)
chr7 (15-51)||(15075138-15075174)
chr7 (2-38)||(23918925-23918961)
chr7 (8-52)||(24909638-24909682)
chr7 (5-57)||(28340891-28340943)
chr7 (2-54)||(31002729-31002781)
chr7 (2-34)||(39591537-39591569)
chr7 (2-57)||(44178972-44179025)
chr7 (2-34)||(46531501-46531533)
[»] chr1 (55 HSPs)
chr1 (3-57)||(25006081-25006135)
chr1 (7-58)||(8130409-8130460)
chr1 (2-57)||(43420226-43420281)
chr1 (3-57)||(7218121-7218175)
chr1 (2-56)||(10581125-10581179)
chr1 (2-56)||(27738228-27738282)
chr1 (1-58)||(5150904-5150961)
chr1 (4-57)||(17269220-17269273)
chr1 (2-51)||(46980182-46980231)
chr1 (5-57)||(4363679-4363731)
chr1 (2-58)||(15566682-15566738)
chr1 (2-58)||(17422984-17423040)
chr1 (2-58)||(45205036-45205092)
chr1 (3-54)||(1393069-1393120)
chr1 (2-53)||(1730860-1730910)
chr1 (2-57)||(4548689-4548744)
chr1 (14-57)||(12564921-12564964)
chr1 (2-41)||(15360862-15360901)
chr1 (2-57)||(30257651-30257706)
chr1 (2-57)||(44422667-44422722)
chr1 (2-60)||(45107590-45107651)
chr1 (3-57)||(4034062-4034116)
chr1 (2-52)||(6933013-6933063)
chr1 (2-52)||(30371116-30371166)
chr1 (2-56)||(48830124-48830178)
chr1 (2-55)||(5592734-5592787)
chr1 (4-57)||(25005844-25005897)
chr1 (2-55)||(28467356-28467409)
chr1 (2-51)||(28788592-28788640)
chr1 (2-55)||(49517038-49517091)
chr1 (7-55)||(5756735-5756783)
chr1 (2-58)||(12477333-12477389)
chr1 (3-51)||(37272639-37272687)
chr1 (2-57)||(44940311-44940364)
chr1 (3-38)||(781185-781220)
chr1 (11-58)||(4078195-4078242)
chr1 (2-57)||(25479549-25479604)
chr1 (2-57)||(33527194-33527249)
chr1 (4-58)||(27887164-27887218)
chr1 (2-44)||(40833895-40833937)
chr1 (2-56)||(43029450-43029503)
chr1 (3-57)||(44032046-44032100)
chr1 (2-31)||(4215340-4215369)
chr1 (2-31)||(5941520-5941549)
chr1 (5-38)||(15799675-15799708)
chr1 (8-49)||(29007771-29007812)
chr1 (2-47)||(36151562-36151607)
chr1 (2-51)||(40304107-40304156)
chr1 (5-58)||(42556677-42556730)
chr1 (6-50)||(5160379-5160422)
chr1 (7-55)||(6074447-6074495)
chr1 (5-57)||(37842402-37842454)
chr1 (1-41)||(43333666-43333706)
chr1 (2-58)||(45999334-45999390)
chr1 (2-58)||(47002920-47002976)
[»] chr6 (40 HSPs)
chr6 (2-55)||(10154189-10154242)
chr6 (2-57)||(4006682-4006737)
chr6 (1-50)||(32848650-32848699)
chr6 (5-58)||(33828617-33828670)
chr6 (2-58)||(1402964-1403020)
chr6 (5-57)||(25100014-25100066)
chr6 (2-57)||(22742334-22742389)
chr6 (3-57)||(1497950-1498004)
chr6 (1-58)||(12757521-12757578)
chr6 (1-58)||(14656291-14656348)
chr6 (2-46)||(323779-323823)
chr6 (2-54)||(2514670-2514722)
chr6 (9-57)||(9912052-9912100)
chr6 (1-57)||(32975945-32976001)
chr6 (1-57)||(33787792-33787848)
chr6 (2-57)||(281895-281950)
chr6 (2-57)||(2117371-2117426)
chr6 (2-57)||(3155144-3155199)
chr6 (2-53)||(3204593-3204644)
chr6 (3-58)||(5623125-5623180)
chr6 (2-57)||(22691567-22691622)
chr6 (2-57)||(25426138-25426193)
chr6 (6-57)||(33558593-33558643)
chr6 (6-44)||(9326928-9326966)
chr6 (1-51)||(10452413-10452463)
chr6 (2-52)||(29274281-29274331)
chr6 (15-57)||(31327655-31327697)
chr6 (2-56)||(31776323-31776377)
chr6 (11-56)||(1432115-1432160)
chr6 (2-55)||(2027455-2027508)
chr6 (3-52)||(7267597-7267646)
chr6 (5-54)||(7485118-7485167)
chr6 (2-39)||(9027545-9027582)
chr6 (1-54)||(10150302-10150355)
chr6 (2-50)||(5550100-5550148)
chr6 (2-42)||(7479169-7479209)
chr6 (2-38)||(7785808-7785844)
chr6 (2-54)||(9093606-9093658)
chr6 (2-58)||(20671911-20671967)
chr6 (3-55)||(24670386-24670438)
[»] scaffold0024 (1 HSPs)
scaffold0024 (2-57)||(27544-27599)
[»] scaffold0508 (1 HSPs)
scaffold0508 (2-57)||(9822-9877)
[»] scaffold0153 (2 HSPs)
scaffold0153 (2-45)||(6557-6600)
scaffold0153 (2-45)||(13577-13620)
[»] scaffold0020 (1 HSPs)
scaffold0020 (2-57)||(160020-160074)
[»] scaffold0110 (1 HSPs)
scaffold0110 (2-56)||(4271-4325)
[»] scaffold0053 (1 HSPs)
scaffold0053 (2-52)||(20147-20197)
[»] scaffold0299 (1 HSPs)
scaffold0299 (5-53)||(11457-11505)


Alignment Details
Target: chr3 (Bit Score: 317; Significance: 1e-179; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 26492921 - 26493264
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatcacgatgtgtttatcgaaataataaactgaaaagatgaatcaag 100  Q
    |||||||||||||||||||||||||| ||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26492921 tataaaataaagtcaaactgttttcacataa-------gttattttcataagctatcacgatgtgtttatcgaaataataaactgaaaagatgaatcaag 26493013  T
Q  101 tatcagaaattacctgttacaaatgcttttcgaagctggccactcaaccctgtggtccaaggtttgacagttacaaccttactacttctgaagcaaatga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26493014 tatcagaaattacctgttacaaatgcttttcgaagctggccactcaaccctgtggtccaaggtttgacagttacaaccttactacttctgaagcaaatga 26493113  T
Q  201 aaaccatgaatgacaccaaaacaaggaatgagaagcctccaactgttgaccatataacaacagaatgatgctttgggtttgaactttgtgaattcatttg 300  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26493114 aaaccatgaatgacaccaaaacaaggaatgagaatcctccaactgttgaccatataacaacagaatgatgctttgggtttgaactttgtgaattcatttg 26493213  T
Q  301 gtttgaagatggagctggggaaggtgcagaaatccaactagaatgtggtgg 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26493214 gtttgaagatggagctggggaaggtgcagaaatccaactagaatgtggtgg 26493264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 28306127 - 28306180
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  28306127 taaaataaagtcaaactgttttcatataagttacaagttgttttcataagctat 28306180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 22232794 - 22232850
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  22232794 ataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatca 22232850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 31337503 - 31337450
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  31337503 ataaaataaagtcaaactgtttttatataagttataagttgtattcataagcta 31337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 1816551 - 1816605
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||||||||||  |||||| |||||||| ||||||||||||||    
T  1816551 ataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctat 1816605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 19679431 - 19679375
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||| |||| |||||    
T  19679431 tataaaataaagtcaaactgttttcttataagctataagttgtttttataaactatc 19679375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 23249529 - 23249581
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||| ||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  23249529 aaatgaagtcaaactgtttttatataagatataagttgttttcataagctatc 23249581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 41452494 - 41452546
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||||| |||| |||| | |||||||||||||||    
T  41452494 aaataaagtcaaactgttttcatattagttgtaagctgttttcataagctatc 41452546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 43875624 - 43875672
Alignment:
Q  10 aagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||||||||    
T  43875624 aagtcaaactgttctcatataagctataagttgttttcataagctatca 43875672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 2201096 - 2201151
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||| |||||||||||||||||||||||| |||||| | ||||||| |||||||    
T  2201096 ataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatc 2201151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 14145880 - 14145935
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| ||| ||||||| |||| | ||||||||||||||||||||||||    
T  14145880 ataaaataaagttaaattgttttcgtatatgctataagttattttcataagctatc 14145935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 24887385 - 24887330
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||| |||||||||| || ||| | |||||||||||||||    
T  24887385 ataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatc 24887330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 36646484 - 36646429
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||  || |||||||||||||||||||| || |||||||||||||||    
T  36646484 ataaaataaagtataattgttttcatataagttataacttgttttcataagctatc 36646429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 38462249 - 38462304
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||||||||| | |||||  | |||||||||||||||    
T  38462249 ataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctatc 38462304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 40122854 - 40122800
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||||    
T  40122854 ataaaataaagtcaaactgttttcata-aagctataagttgtttttataagctatc 40122800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 33965592 - 33965536
Alignment:
Q  3 taaaataaagtcaaactgttttcatat--aagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||||||||  ||| |||||| | |||||||||||||||    
T  33965592 taaaataaagtcaaactgttttcatataaaagctataagatgttttcataagctatc 33965536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 52618974 - 52619026
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| ||| ||||||||||||||||||||| | |||||| ||||||||    
T  52618974 aaataaagttaaattgttttcatataagttataagctgttttcacaagctatc 52619026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 10101578 - 10101527
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    |||||||||||| ||| |||||||||||||| || ||||| |||||||||||    
T  10101578 ataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 10212503 - 10212452
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    |||||||||||| ||| |||||||||||||| || ||||| |||||||||||    
T  10212503 ataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10212452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 21872373 - 21872318
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| |||||| | |||| ||||||| |||||||| |||||||||||||||    
T  21872373 ataaaataaggtcaaatttttttgatataagctataagttgttttcataagctatc 21872318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 25453961 - 25453906
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||||| |||||  |||||  ||||||||||| |||||    
T  25453961 ataaaataaagtcaaactgttttcgtataacctataacctattttcataaactatc 25453906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 31713959 - 31714006
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||||||||||||||| ||| |||||||||||| |||| |||||    
T  31713959 aaataaagtcaaactgttttgatacaagttataagttgttttaataag 31714006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 51197833 - 51197790
Alignment:
Q  7 ataaagtcaaactgttttcatataagttataagttattttcata 50  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||    
T  51197833 ataaagacaaattgttttcatataagttataagttgttttcata 51197790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 12923427 - 12923377
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||||||||||||||| |||| |||||| |||||||| ||||| ||||    
T  12923427 ataaaataaagtcaaactgctttcttataagctataagttgttttcctaag 12923377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 22031164 - 22031218
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||| ||||||||||||||||||  | ||| || ||||||||||||||    
T  22031164 ataaaataaagccaaactgttttcatataaaatgtaaattgttttcataagctat 22031218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 23315594 - 23315648
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||| |||||||||||| | |||||| | ||| ||||||||||    
T  23315594 ataaaataaagtcaaattgttttcatataggctataagatgtttccataagctat 23315648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 24235785 - 24235731
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||| ||||||||||||| |||  ||||||| |||||||| ||||||||||||||    
T  24235785 ataatataaagtcaaactatttgaatataagctataagttgttttcataagctat 24235731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 33405268 - 33405214
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||| ||  |||||||||||||| |||||| | |||||||||||||||    
T  33405268 taaaataaagttaatttgttttcatataagctataagctgttttcataagctatc 33405214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 32
Target Start/End: Complemental strand, 49587018 - 49586988
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataag 32  Q
    |||||||||||||||||||||||||||||||    
T  49587018 ataaaataaagtcaaactgttttcatataag 49586988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 1217900 - 1217847
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||| |||| ||| ||||||||| ||||||||||| | |||||||||||||||    
T  1217900 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatc 1217847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 2197804 - 2197853
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    |||||||||| ||||||| ||||||||||||  ||||| |||||||||||    
T  2197804 ataaaataaaatcaaactattttcatataagcaataagctattttcataa 2197853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 19679855 - 19679806
Alignment:
Q  9 aaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||| |||||||||||||||| |||| ||| ||||||||| ||||||    
T  19679855 aaagtcatactgttttcatataagctataggttgttttcataaactatca 19679806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 20502168 - 20502115
Alignment:
Q  5 aaataaagtcaaa-ctgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||| ||||||||||||| | |||||| | |||||||||||||||    
T  20502168 aaataaagtcaaaactgttttcatatacgctataagctgttttcataagctatc 20502115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 21367637 - 21367690
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||| ||| ||||||| |||||  |||||||| |||||||||||||||    
T  21367637 aaaataaagttaaattgttttcgtataatgtataagttgttttcataagctatc 21367690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 22343589 - 22343630
Alignment:
Q  15 aaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||||||||||||||||| | ||| ||||||||||    
T  22343589 aaactgttttcatataagttataagctgtttccataagctat 22343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 26599146 - 26599187
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttat 43  Q
    ||||||||||||||||  ||||||||||||| ||||||||||    
T  26599146 ataaaataaagtcaaatagttttcatataaggtataagttat 26599187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 28779327 - 28779368
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttatttt 46  Q
    ||||||||||||||| |||||||||||| |||||||| ||||    
T  28779327 aaataaagtcaaactattttcatataagctataagttgtttt 28779368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 29114073 - 29114114
Alignment:
Q  18 ctgttttcatataagttataagttattttcataagctatcac 59  Q
    ||||||||||||| | |||||||| |||||||||||||||||    
T  29114073 ctgttttcatatatgctataagttcttttcataagctatcac 29114114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 41057023 - 41057060
Alignment:
Q  19 tgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  41057023 tgttttcatataagctataagttgttttcataagctat 41057060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 52597673 - 52597710
Alignment:
Q  19 tgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||||||||||||| | ||||||||||||||    
T  52597673 tgttttcatataagttataagatgttttcataagctat 52597710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 2863784 - 2863833
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    |||||||||||  ||||||||||| |||||| |||||| |||||||||||||    
T  2863784 ataaaataaag--aaactgttttcctataagctataagctattttcataagc 2863833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 3467490 - 3467438
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||||||| ||||||||||||   |||||||| ||||| ||||||    
T  3467490 ataaaataaagtcaaattgttttcatatagactataagttgttttcgtaagct 3467438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 16990255 - 16990207
Alignment:
Q  10 aagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||| |||||||||||||||||| |||||||| ||||| ||| ||||||    
T  16990255 aagttaaactgttttcatataagatataagttgttttcttaaactatca 16990207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 23785223 - 23785259
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataa 38  Q
    |||||||||||||||||||| |||||||||| |||||    
T  23785223 ataaaataaagtcaaactgtattcatataagctataa 23785259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 27792840 - 27792896
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||| |||||||| |||||||||||| |  ||||| ||||||||| ||||||    
T  27792840 ataaaataaggtcaaactattttcatataagctgcaagttgttttcataaactatca 27792896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 56
Target Start/End: Original strand, 35057909 - 35057937
Alignment:
Q  28 ataagttataagttattttcataagctat 56  Q
    |||||||||||||||||||||||||||||    
T  35057909 ataagttataagttattttcataagctat 35057937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 42745014 - 42745054
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagtta 42  Q
    |||||||||| || ||||||||||| |||||||||||||||    
T  42745014 ataaaataaattcgaactgttttcacataagttataagtta 42745054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47131957 - 47131997
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagtt 41  Q
    |||||||||||||| |||| |||| ||||||||||||||||    
T  47131957 tataaaataaagtcgaacttttttaatataagttataagtt 47131997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 48397614 - 48397666
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||||||| |||||| || |||| |||||||| ||||||| ||||    
T  48397614 ataaaataaagtcaaattgtttttatttaagctataagttgttttcattagct 48397666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 37053562 - 37053618
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  37053562 ataaaataaagtcaaactgttttcatataagttataagtttttttcattagctatca 37053618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 5043662 - 5043606
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  5043662 ataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctatca 5043606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 11513866 - 11513922
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||    
T  11513866 ataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatca 11513922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 14666516 - 14666571
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  14666516 ataaaataaagtcaaactgatttcatataagttataagttgttttcacaagctatc 14666571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3673774 - 3673830
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||    
T  3673774 tataaaataaagttaaattgttttcatataagttataagtttttttcattagctatc 3673830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 10143140 - 10143196
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||| ||||||||||||||| ||||||| |||||||| ||||||||||||||||    
T  10143140 ataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatca 10143196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 18962140 - 18962084
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||| |||||||||||||||||| |||||  ||||||||||||||||||    
T  18962140 ataaaataaagttaaactgttttcatataagctataaactattttcataagctatca 18962084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 33942118 - 33942174
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||    
T  33942118 ataaaataaagtcaaactgttttcatgtaagctataagttgttttcataagccatca 33942174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 57
Target Start/End: Original strand, 37276722 - 37276769
Alignment:
Q  10 aagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  37276722 aagtcaaactgttttcatataagttataagttgttttcataagttatc 37276769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 35539691 - 35539740
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  35539691 ataaaataaaatcaaactattttcatataagttataagctattttcataa 35539740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 1625871 - 1625923
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| ||| ||||||| ||||||||||||||| |||||||||||||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatc 1625923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 33192161 - 33192197
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataa 38  Q
    |||||||||||||||||||||||||||||||||||||    
T  33192161 ataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 17952803 - 17952748
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||| |||||||||||| || ||| | |||||||||||||||    
T  17952803 ataaaataaagtcaaactattttcatataagctacaagatgttttcataagctatc 17952748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 36863727 - 36863672
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||  |||| ||||||||||||| || |||||||||||||||    
T  36863727 ataaaataaagtcaaacaatttttatataagttataaattgttttcataagctatc 36863672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 15377733 - 15377787
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||| | | ||||||||||||||||||||| | ||||||||||||||    
T  15377733 ataaaataaagttagattgttttcatataagttataagctgttttcataagctat 15377787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 43205281 - 43205335
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcataagctatcacg 60  Q
    ||||||| ||||||||||||||||||| |||||  | ||||||||||||||||||    
T  43205281 aataaagccaaactgttttcatataagatataatctgttttcataagctatcacg 43205335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 5867290 - 5867238
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| ||| |||||||| ||||||| |||||| |||||||||||||||    
T  5867290 aaataaagtaaaagtgttttcacataagttttaagttgttttcataagctatc 5867238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 6988083 - 6988159
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatcacgatgtgtttatcgaaataa 78  Q
    |||||||||||||||| | ||||| ||  ||||||||||| |||||||||||||||  || | |||||| |||||||    
T  6988083 ataaaataaagtcaaattattttcttactagttataagttgttttcataagctatcttgaagagtttatagaaataa 6988159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 7103585 - 7103529
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataag-ttattttcataagctatc 57  Q
    ||||||||||||||||||||||| ||||||| |||||| |  |||||||||||||||    
T  7103585 ataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatc 7103529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 18066099 - 18066151
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| ||| |||||||||||||| |||||| | |||||||||||||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatc 18066151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 33526067 - 33526015
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||| |||||||||| || ||||| | ||||||||||||||    
T  33526067 aaaataaagtcaaactattttcatatatgtaataagcttttttcataagctat 33526015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33944572 - 33944620
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcat 49  Q
    ||||||||||||||||| |||||||||||||| ||||| || |||||||    
T  33944572 tataaaataaagtcaaattgttttcatataagctataaattgttttcat 33944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 35755602 - 35755554
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||||||||| ||||||||| |||| |||||||| ||||||||||    
T  35755602 aaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 40145430 - 40145482
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  40145430 ataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagct 40145482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 43141839 - 43141915
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatcacgatgtgtttatcgaaataa 78  Q
    ||||| |||||||||| ||||| |||||||| |||||| | |||||||||||||||  || | |||||| |||||||    
T  43141839 ataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctatcctgaagagtttatggaaataa 43141915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 1160846 - 1160803
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattt 45  Q
    |||||||||||||||||| |||||||||||| |||||| |||||    
T  1160846 ataaaataaagtcaaactattttcatataagctataagctattt 1160803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 28803608 - 28803553
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||| ||||||||||| || ||||| ||||| ||| |||||    
T  28803608 ataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatc 28803553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 29300613 - 29300668
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||   || ||||||||| ||||||||||||| |||||||||||||||    
T  29300613 ataaaataaaggtgaattgttttcatgtaagttataagttgttttcataagctatc 29300668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 29935971 - 29936026
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| |||||| ||||| ||| |||| |||||||| |||||||||||||||    
T  29935971 ataaaataacgtcaaattgtttccatgtaagctataagtttttttcataagctatc 29936026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 31740061 - 31740022
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagtt 41  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  31740061 ataaaataaagtcaaactattttcatataagctataagtt 31740022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 33256708 - 33256759
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    ||||||||||||||||||||||||||||||  ||||||   |||||||||||    
T  33256708 ataaaataaagtcaaactgttttcatataaactataagcagttttcataagc 33256759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 34055003 - 34054948
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||| |||||||||| |||||| | |||||| | |||||||||||||||    
T  34055003 ataaaataaaggcaaactgtttacatatatgatataaggtgttttcataagctatc 34054948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 37292449 - 37292394
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| ||||| |||||||||||| ||| |||| ||||| |||||||||    
T  37292449 ataaaataaagtaaaactattttcatataagctattagttgttttcttaagctatc 37292394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 42817478 - 42817424
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||| ||||||| |||||||||||||||| ||||  | ||||||||||||||    
T  42817478 ataaaatgaagtcaagctgttttcatataagtaataaactgttttcataagctat 42817424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 43299505 - 43299451
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagt-tataagttattttcataagcta 55  Q
    |||||||||||||||||||||||  ||||| | |||||||| |||||||||||||    
T  43299505 ataaaataaagtcaaactgtttttgtataaatctataagttgttttcataagcta 43299451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9551546 - 9551599
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||||||||||||||||||||  |||||  |||||  ||||||||||||||    
T  9551546 tataaaataaagtcaaactgtttttgtataaactataacctattttcataagct 9551599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 14277993 - 14277940
Alignment:
Q  5 aaataaagtcaaa-ctgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||| |||||||||||||||||||| ||| ||||||  |||||||    
T  14277993 aaataaagtcaaaactgttttcatataagttatatgttgttttcactagctatc 14277940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 30537624 - 30537575
Alignment:
Q  7 ataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||| ||||||||||||| |||||| |||| || ||||||||    
T  30537624 ataaagtcaaacagttttcatataagctataagctattctcgtaagctat 30537575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 4550745 - 4550793
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcata 50  Q
    ||||||||| ||||| ||||||||||||||  |||||||| ||||||||    
T  4550745 ataaaataacgtcaagctgttttcatataaactataagttgttttcata 4550793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 28039434 - 28039382
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||||||||| || |||||||||||||  ||||||  |||||||||||||    
T  28039434 ataaaataaagtccaattgttttcatataaactataagcaattttcataagct 28039382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 37766766 - 37766822
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||| ||||||| |||||  |||||||| ||||| | ||||||||    
T  37766766 ataaaataaagtcaaaatgttttcgtataaactataagttgttttcctgagctatca 37766822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 39983329 - 39983365
Alignment:
Q  21 ttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| |||||||| |||||||||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatc 39983365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 41852005 - 41851969
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataa 38  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  41852005 ataaaattaagtcaaattgttttcatataagttataa 41851969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 42621618 - 42621650
Alignment:
Q  21 ttttcatataagttataagttattttcataagc 53  Q
    ||||||||||||||||||||| |||||||||||    
T  42621618 ttttcatataagttataagttgttttcataagc 42621650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 41277452 - 41277397
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  41277452 ataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatc 41277397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 14295474 - 14295529
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||| |||||||||    
T  14295474 ataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatc 14295529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 32059691 - 32059642
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||||||    
T  32059691 ataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 12407763 - 12407711
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||| || |||||||||| |||||||||||| |||||||||||||    
T  12407763 ataaaataaagtaaatctgttttcatgtaagttataagtcattttcataagct 12407711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 14599405 - 14599353
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||| |||||||||||||||||||||||||||||||| |||  |||||||    
T  14599405 ataaaattaagtcaaactgttttcatataagttataagttgtttcgataagct 14599353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 583875 - 583836
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagtt 41  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  583875 ataaaataaagtcaaactgttttcatataagctataagtt 583836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 4855666 - 4855721
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| ||| |||| |||||||||||||||||| ||||||||| |||||    
T  4855666 ataaaataaagttaaattgttatcatataagttataagttgttttcataaactatc 4855721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 26516368 - 26516423
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||  |||||||||||||||||  | |||||||||||||||    
T  26516368 ataaaataaagtcaaactactttcatataagttataaactgttttcataagctatc 26516423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27772741 - 27772686
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||| |||||  ||||||||||| |||||||||||||| ||||||||||||||    
T  27772741 tataaaacaaagtataactgttttcaaataagttataagttgttttcataagctat 27772686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 38728347 - 38728398
Alignment:
Q  7 ataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||| ||||||||||||| |||||| | |||||||||||||||||||||||    
T  38728347 ataaaatcaaactgttttcctataagctttaagttattttcataagctatca 38728398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 36539714 - 36539764
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||| |||||    
T  36539714 ataaaataaagtcaacctgttttcatataagctataagttgtttttataag 36539764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 41016149 - 41016203
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||| |||||||||||||||||||| |||||||| |||||| |||| ||||    
T  41016149 aaaataaattcaaactgttttcatataagctataagttgttttcacaagccatca 41016203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 18543296 - 18543243
Alignment:
Q  5 aaataaagtcaaact-gttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||| ||||| ||||||| |||||||| |||||||||||||||    
T  18543296 aaataaagtcaaacttgtttttatataagatataagttgttttcataagctatc 18543243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 26209516 - 26209447
Alignment:
Q  2 ataaaataaagtcaaactgttttca-tataagttataagttattttcataagctatcacgatgtgtttat 70  Q
    ||||||||||||| || |||||||| |||||| |||||| | |||||||||||||||| || ||||||||    
T  26209516 ataaaataaagtccaattgttttcaatataagctataagctgttttcataagctatcatgaagtgtttat 26209447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 28586868 - 28586831
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataag 39  Q
    |||||||||||||||||||||||||||||| |||||||    
T  28586868 ataaaataaagtcaaactgttttcatataaattataag 28586831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 2933753 - 2933709
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttatttt 46  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||    
T  2933753 ataaaatgaagttaaactgttttcatataagttataagttgtttt 2933709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 39750111 - 39750147
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataa 38  Q
    |||||||||||||||||| ||||||||||||||||||    
T  39750111 ataaaataaagtcaaactattttcatataagttataa 39750147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 39823223 - 39823171
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||||||||||||||  ||||||||||| || ||||| ||||||||||||    
T  39823223 ataaaataaagtcaaactactttcatataagctacaagttgttttcataagct 39823171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 8985633 - 8985684
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||| ||||||||||| ||  ||| |||||||||||||||||    
T  8985633 aataaagtcaaactattttcatataatttgcaagctattttcataagctatc 8985684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 10272533 - 10272482
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    ||||||| |||||||| ||||||| |||||| |||||||| |||||||||||    
T  10272533 ataaaattaagtcaaattgttttcgtataagctataagttgttttcataagc 10272482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 12975315 - 12975370
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||| ||||| |||||||||||||| |||||| | | |||||||||||||    
T  12975315 ataaaataaaatcaaattgttttcatataagctataagctgtgttcataagctatc 12975370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 15003616 - 15003561
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||| ||||||| | |||||||||| |||||||  |||||||||||||||    
T  15003616 ataaaataaaatcaaactctcttcatataagctataagtggttttcataagctatc 15003561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 18704135 - 18704084
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||| || |||| ||||||| |||||||| ||||||||||||||    
T  18704135 aaataaagtcaagctatttttatataagctataagttgttttcataagctat 18704084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33234328 - 33234379
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||| ||||||||||||||| ||||||| |||||| ||||||| ||||    
T  33234328 tataaaatgaagtcaaactgtttttatataagctataagctattttcgtaag 33234379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 34205207 - 34205262
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||| |||||||||| | |||| ||||||| |||||||| |||||||||||||||    
T  34205207 ataaagtaaagtcaaattatttttatataagctataagttgttttcataagctatc 34205262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 35135764 - 35135725
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagtt 41  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  35135764 ataaaataaagtcaaactattttcatataagctataagtt 35135725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 40159793 - 40159840
Alignment:
Q  8 taaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||| |||||||||||||||||||| |  |||||||||||||    
T  40159793 taaagtcaaattgttttcatataagttataaatcgttttcataagcta 40159840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 9703342 - 9703292
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||||||||||||||  ||||||||||| || ||||| ||||||||||    
T  9703342 ataaaataaagtcaaactcatttcatataagctacaagttgttttcataag 9703292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 14331325 - 14331375
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||||||| | | |||| ||||||||||||||||||||||||| ||||    
T  14331325 aaataaagtcagattatttttatataagttataagttattttcatatgcta 14331375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 19177447 - 19177497
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||| ||||| ||||||||||||||||| |||||||| ||||| ||||    
T  19177447 ataaaattaagtctaactgttttcatataagctataagttgttttcgtaag 19177497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 14257435 - 14257488
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||| ||||| ||||| ||||||||||||||| | ||||||||| |||||    
T  14257435 aaaataaattcaaaatgtttccatataagttataaggtgttttcataaactatc 14257488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 19138816 - 19138767
Alignment:
Q  7 ataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||| ||||| |||||||| ||||| |||||||| ||||||||||||||    
T  19138816 ataaattcaaattgttttcagataagctataagttgttttcataagctat 19138767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 41957551 - 41957498
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||| |||| ||| ||||||||| ||||||||||| | |||||||||||||||    
T  41957551 aaaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatc 41957498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 9634746 - 9634794
Alignment:
Q  8 taaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||| || | |||||||||| |||||||||| ||||||||||||||    
T  9634746 taaagtcgaagtattttcatatatgttataagttgttttcataagctat 9634794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 32172621 - 32172677
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||| |||||||  ||||| |||||||| |||||| | ||||||||||||||||    
T  32172621 ataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatca 32172677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 34245692 - 34245748
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||| ||| || ||||||||| ||||||| |||||||| |||| |||||||||||    
T  34245692 ataaaacaaattccaactgttttaatataagctataagttgtttttataagctatca 34245748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 37063176 - 37063144
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagtt 34  Q
    |||||||||||||||||| ||||||||||||||    
T  37063176 ataaaataaagtcaaactattttcatataagtt 37063144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 38831558 - 38831514
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttatttt 46  Q
    |||||||||||||||||||||||| ||||| | ||||||| ||||    
T  38831558 ataaaataaagtcaaactgttttcgtataaatgataagttgtttt 38831514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39809881 - 39809917
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttata 37  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  39809881 tataaaataaagtcaaattgttttcgtataagttata 39809917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 41017697 - 41017745
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||||||||||  ||||| |||||| |||||||| ||||||||||    
T  41017697 aaaataaagtcaaaccattttcctataagctataagttgttttcataag 41017745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 54325139 - 54325083
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  54325139 ataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctatca 54325083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 2996541 - 2996596
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||    
T  2996541 ataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatc 2996596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 10192256 - 10192307
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  10192256 aataaagtcaaattgttttcatataagttataagttgttttcaaaagctatc 10192307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 55870440 - 55870390
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  55870440 aaataaagtcaaactgttttcacataagctataagttgttttcataagcta 55870390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 927447 - 927500
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||||||||||||| ||||| || ||| ||||||||||||    
T  927447 aaataaagtcaaactgttttcatataagctataacttgtttgcataagctatca 927500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 2980566 - 2980513
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| |||||||| |||||||||||| || ||||||||||||    
T  2980566 aaaataaagtcaaactattttcatacaagttataagttgttctcataagctatc 2980513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 22471299 - 22471348
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    ||||| ||||| |||||||||||||||||||||||||||| |||||||||    
T  22471299 ataaattaaaggcaaactgttttcatataagttataagttgttttcataa 22471348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 30207672 - 30207620
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  30207672 ataaaataaa-tcaaactgttttcatataagctataagttgttttcataagcta 30207620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 46013402 - 46013361
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttat 43  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  46013402 ataaaataaagtcaaactgtttttatataagttataagttat 46013361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 49085957 - 49086010
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||||| |||||||| |||||||| |||||||||||| |||||||||||||    
T  49085957 ataaaataatgtcaaactattttcatacaagttataagttgttttcataagcta 49086010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23819056 - 23819112
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||  ||||||||||||||||||||||||||||  | |||||||||||||||    
T  23819056 tataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctatc 23819112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 29194505 - 29194449
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||| |||| |||||    
T  29194505 ataaaataaaatcaaactattttcatataagttataacttattttcttaagttatca 29194449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 31038969 - 31038917
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||||||| |||||||||||||||||||||  ||||| |||||||    
T  31038969 ataaaataaagtcaaattgttttcatataagttataagccatttttataagct 31038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 46415883 - 46415839
Alignment:
Q  13 tcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| |||||||||||| |||||||||||||||    
T  46415883 tcaaactgttttcatacaagttataagttcttttcataagctatc 46415839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49219106 - 49219162
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||| | |||||||||||| |||||||| ||||||||| |||||    
T  49219106 tataaaataaagtcaaattattttcatataagctataagttgttttcataaactatc 49219162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 927260 - 927315
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||| |||| ||||    
T  927260 ataaaataaagtcaaattgtttccatataagttataagttgttttcttaagttatc 927315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 3175919 - 3175974
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| ||||||||  ||||||||||| | |||||||||||||||    
T  3175919 ataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctatc 3175974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 19429590 - 19429535
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||| ||||||||  |||| | |||||||||||||||    
T  19429590 ataaaataaagtcaaactgtttttatataagtcgtaagctcttttcataagctatc 19429535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24444005 - 24444060
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||| ||||||  |||||||||||| |||||||| ||||||||||||||    
T  24444005 tataaaataaattcaaacaattttcatataagctataagttgttttcataagctat 24444060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 44319917 - 44319972
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||| ||||||||||||||||| || ||| |||||| ||||||||||    
T  44319917 ataaaataaagtcgaactgttttcatataagctacaagctattttgataagctatc 44319972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 51630079 - 51630134
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| ||| |||||| ||||||| |||||| |||||||||||||||||    
T  51630079 ataaaataaagttaaattgttttgatataagctataagctattttcataagctatc 51630134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 437534 - 437480
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||| ||| ||| |||||||||||| |||||| ||||||||||||||    
T  437534 ataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctat 437480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 7368157 - 7368103
Alignment:
Q  3 taaaataaagtcaaactgttttcatataag-ttataagttattttcataagctat 56  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||    
T  7368157 taaaataaagtcaaattgttttcatataagcttataagttgtttccataagctat 7368103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 13949946 - 13949893
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||||||||| |||||||||||||| |||||||| |||  ||||||||    
T  13949946 ataaaataaagtcaaattgttttcatataagctataagttgtttgtataagcta 13949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 24929461 - 24929510
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    ||||||||||||| ||||||||||||| ||| |||||||| |||||||||    
T  24929461 ataaaataaagtctaactgttttcataaaagctataagttgttttcataa 24929510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 42321981 - 42321936
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttc 47  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||||    
T  42321981 ataaaataaagtcaaattgttttcatataaattataagttgttttc 42321936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 46247186 - 46247227
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttat 43  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  46247186 ataaaataaagtcaaactgtttttatataaattataagttat 46247227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 46796986 - 46797039
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||    
T  46796986 ataaaataaattcaatatgtttccatataagttataagttgttttcataagcta 46797039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21157735 - 21157791
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||| |||||||||||||||||||| |||| |||||| | |||||||| ||||||    
T  21157735 tataaactaaagtcaaactgttttcatgtaagctataagatgttttcatatgctatc 21157791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 28582012 - 28581956
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||| |||||| ||| ||||| |||| |||||| |||||||||    
T  28582012 ataaaataaagtcaaactattttcagatatgttatgagttgttttcaaaagctatca 28581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 42866047 - 42866091
Alignment:
Q  13 tcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||    
T  42866047 tcaaactgtttttatataagctataagttgttttcataagctatc 42866091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 8151840 - 8151789
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||| |||||| |||||||||||||||||  ||||| ||||||||||||    
T  8151840 taaaatatagtcaagctgttttcatataagtttaaagttgttttcataagct 8151789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 10812478 - 10812529
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||| ||||||||| ||||||||||||| ||||||||  |||||||||||||    
T  10812478 aaaaaaaagtcaaattgttttcatataacttataagtagttttcataagcta 10812529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 18630648 - 18630703
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||   ||||||||||||| |||||||| |||||| ||||||||    
T  18630648 ataaaataaagtcaattggttttcatataagctataagttgttttcacaagctatc 18630703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 35290289 - 35290234
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| ||| ||| ||||||||||||| ||| | |||||||||||||||    
T  35290289 ataaaataaagttaaattgtattcatataagttagaagcttttttcataagctatc 35290234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 52735090 - 52735145
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| |  |||||||||||||||| ||| ||||| |||||||||    
T  52735090 ataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatc 52735145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 53626744 - 53626795
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    |||||||||| ||||| |||||||||||||| |||||| | |||||||||||    
T  53626744 ataaaataaattcaaaatgttttcatataagctataagctgttttcataagc 53626795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 4071850 - 4071904
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||| | |||||||||||| |||||||| || | |||||||||    
T  4071850 ataaaataaagtcaaattattttcatataagctataagttgttatgataagctat 4071904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 11698934 - 11698980
Alignment:
Q  9 aaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||||||| |||||||||| |||| ||||| |||||||||||||    
T  11698934 aaagtcaaactattttcatatatgttagaagttgttttcataagcta 11698980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 17884036 - 17884090
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||| ||| ||||||  |||||||||| |||| ||||||||||||||    
T  17884036 ataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctat 17884090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 44138712 - 44138762
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||| ||||||||||||||| |||||  | ||||||||||||||    
T  44138712 aataaagtcaatctgttttcatataagctataaaatgttttcataagctat 44138762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 18628643 - 18628590
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||| |||||||||||||| |||||||||||||  | |||||||||| ||||    
T  18628643 aaaatatagtcaaactgtttttatataagttataaactgttttcataagttatc 18628590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 36048515 - 36048556
Alignment:
Q  16 aactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||| |||||| |||||||| ||||||||    
T  36048515 aactgttttcatataagctataagctattttcaaaagctatc 36048556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 36722757 - 36722716
Alignment:
Q  16 aactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||||||| |||| ||||| ||||    
T  36722757 aactgttttcatataagttataagttgttttgataagttatc 36722716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 53155234 - 53155287
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||| |||| |||||||||| | |||||  ||||||||||||||||||    
T  53155234 aaataaagtcgaactattttcatatatgctataaactattttcataagctatca 53155287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 55372443 - 55372390
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||||||||| || |||||| || |||||||  ||||||||||||||    
T  55372443 taaaataaagtcaaactattatcatatgagctataagtagttttcataagctat 55372390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 19691376 - 19691424
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    |||||||||||||| ||||||||||| || |||||||||  ||||||||    
T  19691376 taaaataaagtcaacctgttttcatagaaattataagttgatttcataa 19691424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 19701961 - 19702009
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    |||||||||||||| ||||||||||| || |||||||||  ||||||||    
T  19701961 taaaataaagtcaacctgttttcatagaaattataagttgatttcataa 19702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 21952930 - 21952966
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataag 39  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  21952930 taaaataaagtcaaattgttttcatataagctataag 21952966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 21953243 - 21953295
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||| |||| ||||||| ||||||  ||||| |||||||||    
T  21953243 aaaataaagtcaaactctttttatataagctataagccattttgataagctat 21953295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 24160597 - 24160545
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||| ||||| ||||||| ||||||| |||| |||||||| ||||||||||||    
T  24160597 ataatataaattcaaactattttcatgtaagctataagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 25434562 - 25434518
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttatttt 46  Q
    |||||||||||||||  |||||||||||||| |||||||| ||||    
T  25434562 ataaaataaagtcaatatgttttcatataagctataagttgtttt 25434518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30877221 - 30877169
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||| |||||||| |||||||||| |||| ||  |||||||||||||||||    
T  30877221 aaataatgtcaaactattttcatatatgttacaaaatattttcataagctatc 30877169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 6864561 - 6864507
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  6864561 ataaaataaagtcaaactattttcatgtaagttataagttgttttcataagctat 6864507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 11784748 - 11784697
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||||||| | |||||||| |||||||||||||||||||||||||    
T  11784748 aaataaagtcaaactatcttcatatatgttataagttattttcataagctat 11784697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 34770860 - 34770915
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||    
T  34770860 ataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatc 34770915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 29973050 - 29973104
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||| |||||| ||||| |||||||| |||||||||||||||    
T  29973050 taaaataaagtcaaactattttcacataagctataagttgttttcataagctatc 29973104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 10075647 - 10075598
Alignment:
Q  8 taaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||||||    
T  10075647 taaagtcaaactatttttatataagttataagctattttcataagctatc 10075598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 27728123 - 27728068
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||| |||||||||||  ||| |||| |||||||||||||||    
T  27728123 ataaaataaagtcaaactattttcatataaagtattagttgttttcataagctatc 27728068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 28784897 - 28784842
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| |||||| |||| |||| |||| |||||||||||||||||    
T  28784897 ataaaataaagtcaaattgttttgatatcagttgtaagctattttcataagctatc 28784842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35869804 - 35869859
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||| ||||||  |||||||||||| |||||||| ||||||||||||||    
T  35869804 tataaaataaattcaaacaattttcatataagctataagttgttttcataagctat 35869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 11795064 - 11795114
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||| ||||||||||||||||||||||| |  |||||||||||||    
T  11795064 aataaagtcacactgttttcatataagttataagctgatttcataagctat 11795114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 33209322 - 33209268
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||||| ||||||||||||||||  |||||| |||||| |||||||||    
T  33209322 ataaaataaagtcgaactgttttcatataaactataagctatttttataagctat 33209268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 9834889 - 9834836
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||  |||| |||||||||||||| |||||||| |||||||||||||||    
T  9834889 aaaataaaaccaaattgttttcatataagctataagttgttttcataagctatc 9834836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 13561411 - 13561358
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||| ||||||||||||| |||||| || |||||| |||||||||    
T  13561411 aaataaagtcaaattgttttcatataaattataacttgttttcacaagctatca 13561358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34213632 - 34213575
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||||  ||||||||||||||| |||| ||||| |||| |||||    
T  34213632 tataaaataaagtcaaactactttcatataagttatgagttgttttcgtaagttatca 34213575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 30013189 - 30013241
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||| |||||||||||||| |||||||| |||||| | |||||||||||||||    
T  30013189 aaattaagtcaaactgtttccatataagctataagctgttttcataagctatc 30013241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5071070 - 5071019
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||||||||||||||| ||||||||||| || |||| | ||||||||||    
T  5071070 tataaaataaagtcaaacttttttcatataacttgtaagatgttttcataag 5071019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 6509405 - 6509350
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| ||| || ||||||| |||||| | |||||||||||||||    
T  6509405 ataaaataaagtcaaattgtatttatataagctataagctgttttcataagctatc 6509350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 9836956 - 9836901
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||| |||||||||||| ||||||||||||||| ||  | |||||||||||||||    
T  9836956 ataaagtaaagtcaaactattttcatataagttacaacctgttttcataagctatc 9836901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 11764097 - 11764050
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcata 50  Q
    ||||||||| | ||||||||||||||||||||||||| ||||| ||||    
T  11764097 taaaataaactgaaactgttttcatataagttataaggtatttccata 11764050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28769442 - 28769387
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||| |||||||||| ||||| |||||| |||||| | ||||||||||||||    
T  28769442 tataaaattaagtcaaactattttcttataagctataagctgttttcataagctat 28769387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 37461113 - 37461168
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatcacg 60  Q
    |||||| ||||||||||| | ||||||| |||| ||| ||||||||||||||||||    
T  37461113 aaataacgtcaaactgttattatataagctatatgttgttttcataagctatcacg 37461168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38260499 - 38260550
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||| ||||| ||||||||||||| ||||||||||||| ||||| ||||    
T  38260499 tataaaagaaagttaaactgttttcatttaagttataagttgttttcttaag 38260550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 43704473 - 43704430
Alignment:
Q  9 aaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||||||||||||||||||  |||||||| ||||||||||    
T  43704473 aaagtcaaactgttttcatataaactataagttgttttcataag 43704430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 12361160 - 12361210
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||| |||||||| |||||||||||||| |||||| | ||||||||||    
T  12361160 ataaaatgaagtcaaattgttttcatataagctataagctgttttcataag 12361210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 33912102 - 33912152
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    ||||||||| |||||||||||  |||||||||||||||| ||| |||||||    
T  33912102 taaaataaactcaaactgtttctatataagttataagttgtttacataagc 33912152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8062494 - 8062547
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||| ||||||||| |||||||||||||| |||||| | || ||||||||||||    
T  8062494 aaaaaaaagtcaaattgttttcatataagctataagatgttctcataagctatc 8062547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 29342259 - 29342308
Alignment:
Q  8 taaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||| ||| | ||||||||||||||| || ||||||||||||||||||    
T  29342259 taaagttaaattattttcatataagttacaaattattttcataagctatc 29342308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 30600450 - 30600397
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||| |||| ||||  ||||||||||||||| |||||||| |||||    
T  30600450 taaaataaagtcgaactatttttgtataagttataagttgttttcatatgctat 30600397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 35298580 - 35298523
Alignment:
Q  2 ataaaataaagtcaaactgttttca-tataagttataagttattttcataagctatca 58  Q
    ||||||||||| ||||| ||||||| |||||  |||||||| ||||||||||||||||    
T  35298580 ataaaataaagccaaacagttttcaatataaactataagttgttttcataagctatca 35298523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 1470958 - 1470902
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||| |  ||||||||||| |||||| | ||||||||| ||||||    
T  1470958 ataaaataaagtcaaattactttcatataagctataagctgttttcataacctatca 1470902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 2093247 - 2093323
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatcacgatgtgtttatcgaaataa 78  Q
    ||||||||||||||||  |||||| | |||| |||||||| ||||||| |||||||  || | |||||| |||||||    
T  2093247 ataaaataaagtcaaatggttttcttttaagctataagttgttttcattagctatcctgaagcgtttatagaaataa 2093323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 6875360 - 6875328
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttat 36  Q
    |||||||||||||||| ||||||||||||||||    
T  6875360 aaaataaagtcaaactattttcatataagttat 6875328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 7645955 - 7645999
Alignment:
Q  11 agtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||| ||||||||| |||| |||||||| |||||||||||||    
T  7645955 agtcaaattgttttcatgtaagctataagttgttttcataagcta 7645999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 7878587 - 7878551
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataag 39  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  7878587 taaaataaagtcaaattgttttcatataagctataag 7878551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 58
Target Start/End: Original strand, 10460579 - 10460627
Alignment:
Q  10 aagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||| |||||||| ||| |||||||  ||||||||||||||||    
T  10460579 aagtcaaactattttcatacaagctataagtggttttcataagctatca 10460627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 25872503 - 25872471
Alignment:
Q  7 ataaagtcaaactgttttcatataagttataag 39  Q
    ||||||| |||||||||||||||||||||||||    
T  25872503 ataaagtaaaactgttttcatataagttataag 25872471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 26284894 - 26284842
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||||||||  || ||||| ||||| |||| ||||    
T  26284894 aaataaagtcaaactgttttcatataaagtacaagttgttttcgtaagttatc 26284842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 30191243 - 30191167
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatcacgatgtgtttatcgaaataa 78  Q
    ||||||||||||||||||| |  |||||||  |||||| |||||| ||||||||||  ||  ||||||| |||||||    
T  30191243 ataaaataaagtcaaactgctcacatataatctataagctattttgataagctatcctgaaatgtttatggaaataa 30191167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31804557 - 31804501
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||| ||| ||||||| |||||||||||||   ||||||| |||||||    
T  31804557 tataaaataaagttaaattgttttcctataagttataagcagttttcatgagctatc 31804501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 34788529 - 34788493
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataa 38  Q
    |||||||||||||||||||||| |||||||| |||||    
T  34788529 ataaaataaagtcaaactgtttccatataagctataa 34788493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 39551311 - 39551259
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||  ||||||| |||||| ||| |||||||| ||||||||||||    
T  39551311 ataaaataaagctaaactgtcttcatacaagctataagttgttttcataagct 39551259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 28340498 - 28340444
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||    
T  28340498 ataaaataaagtcaaactgttttcatgtaagttataagttgttttcagaagctat 28340444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 5006611 - 5006558
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||||||||    
T  5006611 ataaaataaagtcaaactgttttcatataaggtataaattgttttcataagcta 5006558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 58
Target Start/End: Complemental strand, 27481388 - 27481340
Alignment:
Q  10 aagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27481388 aagtcaaactgtttccatataagctataagttattttcataagctatca 27481340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 30456552 - 30456497
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||||||| |||||    
T  30456552 ataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatc 30456497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 31338476 - 31338531
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||    
T  31338476 ataaaataaagtcaaactgtttttatataagttataagttgtttccataaactatc 31338531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 1417232 - 1417285
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||||||||| ||||||||||||||  ||||||| |||||||||||||    
T  1417232 ataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17989126 - 17989073
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||||||||||||||||||||||  ||||| || ||||||||||||    
T  17989126 tataaaataaagtcaaactgttttcatataaactataatttgttttcataagct 17989073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 9527188 - 9527140
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  9527188 aataaagtcaaactgttttcatataaactataagttgttttcataagct 9527140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 5369789 - 5369738
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||||| | |||||| | |||||||||||||||    
T  5369789 aataaagtcaaactgttttcatatatgctataagctgttttcataagctatc 5369738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 29363486 - 29363541
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||||||||| ||||||||| | || ||||||| ||||    
T  29363486 ataaaataaagtcaaactgttttcatattagttataagctgttatcataagttatc 29363541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 35536075 - 35536117
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttatt 44  Q
    |||||||||||||||| ||||||||||||||||||||| ||||    
T  35536075 ataaaataaagtcaaattgttttcatataagttataagctatt 35536117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 45593821 - 45593788
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagtta 35  Q
    ||||||||||||||||||||||||||||||||||    
T  45593821 ataaaataaagtcaaactgttttcatataagtta 45593788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 45777273 - 45777216
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatcac 59  Q
    ||||||| ||||||||||||||||||||||  |||||||| ||||| || ||||||||    
T  45777273 ataaaattaagtcaaactgttttcatataaactataagttgttttcgtaggctatcac 45777216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 27492766 - 27492818
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||| ||||||| ||||||||||||| ||||| | |||||||||||||||    
T  27492766 aaataaaatcaaacttttttcatataagtaataagatgttttcataagctatc 27492818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 46082002 - 46082050
Alignment:
Q  3 taaaataaagtcaaa-ctgttttcatataagttataagttattttcata 50  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  46082002 taaaacaaagtcaaaactgttttcatataagttataagttgttttcata 46082050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 49060508 - 49060556
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcata 50  Q
    |||||||||||||||| | |||| ||||||| |||||||||||||||||    
T  49060508 ataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 3468582 - 3468637
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||| |||||||||| ||||| ||||||||||||| | ||||||||| |||||    
T  3468582 ataaaatgaagtcaaactattttcgtataagttataagcttttttcataatctatc 3468637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 11208417 - 11208472
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||| |||||| ||||||||||||  |||| ||| |||||||||||||||    
T  11208417 ataaaataaactcaaaccgttttcatataaactatatgttgttttcataagctatc 11208472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 12110328 - 12110383
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| ||||||  |||||| |||||| | |||||||||||||||    
T  12110328 ataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatc 12110383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 24363703 - 24363648
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||| |||||| || |||||||| | |||||||||| |||||||||||||||    
T  24363703 ataaaatagagtcaatctattttcatacaggttataagttgttttcataagctatc 24363648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 27548231 - 27548286
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||| || ||||||||| |||| |||||| | |||||||||||||||    
T  27548231 ataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatc 27548286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 44821930 - 44821981
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||||| ||||||  ||||||||||||| | ||||||||||||||    
T  44821930 aaataaagtcaaattgtttttgtataagttataagctgttttcataagctat 44821981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 47046210 - 47046155
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| |||||||||||||| |   |||| |||||||||||||||    
T  47046210 ataaaataaagtcaaattgttttcatataagctccgagttgttttcataagctatc 47046155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 819863 - 819830
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagtt 34  Q
    |||||||||||||||||||||||| |||||||||    
T  819863 tataaaataaagtcaaactgtttttatataagtt 819830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 18516349 - 18516296
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||| ||| |||||||||| |||||||| ||| |||| ||||||    
T  18516349 aaaataaagtcaaattgtgttcatataagctataagttgtttccatatgctatc 18516296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 21076992 - 21077029
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataag 39  Q
    ||||||||||||||||||||||| ||||||| ||||||    
T  21076992 ataaaataaagtcaaactgttttaatataaggtataag 21077029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 946720 - 946764
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttatttt 46  Q
    |||||||||||||||| ||||||| ||| ||||||||||| ||||    
T  946720 ataaaataaagtcaaattgttttcgtattagttataagttgtttt 946764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 15075174 - 15075138
Alignment:
Q  15 aaactgttttcatataagttataagttattttcataa 51  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  15075174 aaactatttttatataagttataagttattttcataa 15075138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 23918925 - 23918961
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataa 38  Q
    |||||||||||||||| |||||||||||||| |||||    
T  23918925 ataaaataaagtcaaattgttttcatataagctataa 23918961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 24909638 - 24909682
Alignment:
Q  8 taaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||||| | |||||||||||| |||||||| ||||||||||    
T  24909638 taaagtcaaattattttcatataagctataagttgttttcataag 24909682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 28340943 - 28340891
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||| |||||||| |||| ||||||||| |||||| | |||||||||||||||    
T  28340943 aaatgaagtcaaattgttgtcatataagctataagctgttttcataagctatc 28340891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 31002729 - 31002781
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||||||| | |||||||||||| |||||| | |||| |||||||    
T  31002729 ataaaataaagtcaaaatattttcatataagctataagctgttttgataagct 31002781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 39591569 - 39591537
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagtt 34  Q
    |||||||||||||||| ||||||||||||||||    
T  39591569 ataaaataaagtcaaattgttttcatataagtt 39591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 44179025 - 44178972
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||| ||||||  ||||| ||||| |||||||||||| |||||    
T  44179025 ataaaataaagtcaaaccgttttc--ataagctataatttattttcataatctatc 44178972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 46531501 - 46531533
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagtt 34  Q
    ||||||||||||||||||||||| |||||||||    
T  46531501 ataaaataaagtcaaactgtttttatataagtt 46531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 25006135 - 25006081
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||||||    
T  25006135 taaaataaagtcaaattgttttcatataagctataagttgttttcataagctatc 25006081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 8130409 - 8130460
Alignment:
Q  7 ataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  8130409 ataaagtcaaactgttttcacataagctataagttgttttcataagctatca 8130460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 43420226 - 43420281
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||| |||| |||||||||  |||||||||||||||||||||    
T  43420226 ataaaataaagtcaaactttttttatataagttgcaagttattttcataagctatc 43420281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 7218175 - 7218121
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||    
T  7218175 taaaataaagtcaaattgttttcatataagctataagttgttttcataacctatc 7218121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 10581179 - 10581125
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||    
T  10581179 ataaaataaagtcaaacttttttcatttaagctataagttgttttcataagctat 10581125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 27738282 - 27738228
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||| |||||||||||||| ||||| || ||||||||||||||    
T  27738282 ataaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5150904 - 5150961
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||||||||| ||||||| |||||| ||| || ||||||||||||||||    
T  5150904 tataaaataaagtcaaactattttcatttaagttgtaatttgttttcataagctatca 5150961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 17269220 - 17269273
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||| ||||||||||||||  ||||||| |||||||||||||||    
T  17269220 aaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatc 17269273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 46980231 - 46980182
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    ||||||||||| ||||||||||||||||||||||||| || |||||||||    
T  46980231 ataaaataaagacaaactgttttcatataagttataaattgttttcataa 46980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 4363731 - 4363679
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||| ||||||||||||||||||||| |||||  |||||||||||||||||    
T  4363731 aaataatgtcaaactgttttcatataagctataacctattttcataagctatc 4363679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 15566738 - 15566682
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||||||||||| || | ||||||||||  ||||||||||||||||||    
T  15566738 ataaaataaagtcaaactgttctcctttaagttataatctattttcataagctatca 15566682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 17423040 - 17422984
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||||| ||| ||||||||||| |||||||| |||||||| |||||||    
T  17423040 ataaaataaagtcaagctgatttcatataagctataagttgttttcatatgctatca 17422984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 45205036 - 45205092
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||| ||| |||||||| || ||||| ||||||||||||||||    
T  45205036 ataaaataaagtcaaactatttccatataagctagaagttgttttcataagctatca 45205092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 1393120 - 1393069
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||||||| || |||||||||| |||||||||||| |||||||||||||    
T  1393120 taaaataaagtaaatctgttttcatgtaagttataagtcattttcataagct 1393069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 1730860 - 1730910
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||    
T  1730860 ataaaataaagtcaaactattt-catgtaagttataagttattttcataagc 1730910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 4548689 - 4548744
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||| ||| |||| ||||| | |||||||||||||||    
T  4548689 ataaaataaagtcaaactgtttttatacaagtcataagctgttttcataagctatc 4548744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 12564964 - 12564921
Alignment:
Q  14 caaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  12564964 caaactgttttcatataagctataagttgttttcataagctatc 12564921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 15360862 - 15360901
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagtt 41  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  15360862 ataaaataaagtcaaactgttttcatataagctataagtt 15360901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 30257651 - 30257706
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||| |||||||| | |||||| ||||||||| |||||    
T  30257651 ataaaataaagtcaaactgtttccatataagctttaagttgttttcataaactatc 30257706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 44422667 - 44422722
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||  |||||||||||||||||||| |||||| |||||| ||||||||||    
T  44422667 ataaaataatctcaaactgttttcatataagctataagctatttttataagctatc 44422722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 45107590 - 45107651
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttata---agttattttcataagctatcacg 60  Q
    |||||||||||||||||| |||||||||||||||||   |||  ||||||||||||||||||    
T  45107590 ataaaataaagtcaaactattttcatataagttataattagtcgttttcataagctatcacg 45107651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 4034116 - 4034062
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||| |||| ||| ||||| ||||||||| ||||||||||||||    
T  4034116 taaaataaagtcaaaatgttatcacataagctataagttactttcataagctatc 4034062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 6933063 - 6933013
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||||||||||| |||||||||| ||||||| |||| ||||||||||    
T  6933063 ataaaataaagtcaaattgttttcatagaagttattagttcttttcataag 6933013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 30371116 - 30371166
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||||| ||||| |||||||||||||| |||||||| ||||||||||    
T  30371116 ataaaataaactcaaattgttttcatataagctataagttgttttcataag 30371166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 48830178 - 48830124
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||||| |||||||||||| |||||  | ||||||||||||||    
T  48830178 ataaaataaagtcaaactattttcatataagctataaactgttttcataagctat 48830124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 5592787 - 5592734
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||||||||| || |||| ||||||||| |||||||| |||||||||||||    
T  5592787 ataaaataaagtcgaattgttgtcatataagctataagttgttttcataagcta 5592734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 25005897 - 25005844
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||| |||||||  |||||||||||||| |||||||| |||||||||||||||    
T  25005897 aaaatgaagtcaacttgttttcatataagctataagttgttttcataagctatc 25005844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 28467409 - 28467356
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||||||||| | |||||||||||| || ||||| |||||||||||||    
T  28467409 ataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 28788640 - 28788592
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  28788640 ataaaataaagtcaaactgttttcatataagctat-agtcattttcataa 28788592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 49517038 - 49517091
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||||||||| ||||||||| |||| |||||| | |||||||||||||    
T  49517038 ataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 5756783 - 5756735
Alignment:
Q  7 ataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||| ||||||||||||||||| ||||||||| ||||| |||||||    
T  5756783 ataaagttaaactgttttcatataaattataagttgttttcgtaagcta 5756735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 12477389 - 12477333
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||||||||||| |||| |||| | | |||| |||||||||||    
T  12477389 ataaaataaagtcaaactgttttcatgtaagatatatgcttttttaataagctatca 12477333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 37272687 - 37272639
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    |||||||||||||| ||||||||||||||| |||||| | |||||||||    
T  37272687 taaaataaagtcaatctgttttcatataagctataagctgttttcataa 37272639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 44940311 - 44940364
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||  ||||||||| |||||||||||||| ||||||||| |||||    
T  44940311 ataaaataaagtca--ctgttttcaaataagttataagttgttttcataatctatc 44940364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 781220 - 781185
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataa 38  Q
    ||||||||||| ||||||||||||||||||||||||    
T  781220 taaaataaagtgaaactgttttcatataagttataa 781185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 4078242 - 4078195
Alignment:
Q  11 agtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||| |||||||||||  |||||||| ||||||||||||||||    
T  4078242 agtcaaactattttcatataatctataagttgttttcataagctatca 4078195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 25479549 - 25479604
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| |||||| ||| |||||||| | |||||||| |||||||||||||||    
T  25479549 ataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatc 25479604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 33527249 - 33527194
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||| |||||||||||||||||||||  |||||| | |||||||||| ||||    
T  33527249 ataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatc 33527194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 27887218 - 27887164
Alignment:
Q  4 aaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||  ||| |||||||| |||||||| ||||||||| ||||||    
T  27887218 aaaataaagtcaaacaatttccatataagctataagttgttttcataaactatca 27887164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 40833937 - 40833895
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttatt 44  Q
    |||||||||| |||||||||||| ||||||| |||||||||||    
T  40833937 ataaaataaaatcaaactgtttttatataagctataagttatt 40833895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 43029503 - 43029450
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||| ||||||||||| | |||||||||| || ||||||||||||||||    
T  43029503 ataaaataaattcaaactgtttcc-tataagttatgaggtattttcataagctat 43029450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 44032100 - 44032046
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||| |||||||||||||| |||||  ||||||| |||| ||||    
T  44032100 taaaataaagtcaaattgttttcatataagctataaactattttcttaagttatc 44032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Original strand, 4215340 - 4215369
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataa 31  Q
    ||||||||||||||||||||||||||||||    
T  4215340 ataaaataaagtcaaactgttttcatataa 4215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 31
Target Start/End: Complemental strand, 5941549 - 5941520
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataa 31  Q
    ||||||||||||||||||||||||||||||    
T  5941549 ataaaataaagtcaaactgttttcatataa 5941520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 15799675 - 15799708
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataa 38  Q
    |||||||||||||||||||||||||||| |||||    
T  15799675 aaataaagtcaaactgttttcatataagctataa 15799708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 29007812 - 29007771
Alignment:
Q  8 taaagtcaaactgttttcatataagttataagttattttcat 49  Q
    |||||||||||| |||||||||||| |||||||| |||||||    
T  29007812 taaagtcaaactattttcatataagctataagttgttttcat 29007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 36151607 - 36151562
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttc 47  Q
    |||||||||||||||| ||||||| |||||||||||| || |||||    
T  36151607 ataaaataaagtcaaattgttttcgtataagttataaattgttttc 36151562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 40304156 - 40304107
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    |||||||||| ||| | ||||||||||||||||||||| | |||||||||    
T  40304156 ataaaataaaatcacattgttttcatataagttataagctgttttcataa 40304107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 42556730 - 42556677
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||| |||||||  ||| ||||||| |||||||| ||||||||||||||||    
T  42556730 aaataaaatcaaactacttttatataagctataagttgttttcataagctatca 42556677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 5160379 - 5160422
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcata 50  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||    
T  5160379 aataaagtcaaactgtttt-atataagttataagctgttttcata 5160422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 6074447 - 6074495
Alignment:
Q  7 ataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    ||||||| |||||||||||||||||| ||| |||| ||||| |||||||    
T  6074447 ataaagttaaactgttttcatataagctatgagttgttttcttaagcta 6074495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 37842454 - 37842402
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| ||||||| |||  ||||| |||||||| |||||||||||||||    
T  37842454 aaataaagttaaactgtgttcgaataagctataagttgttttcataagctatc 37842402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43333666 - 43333706
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagtt 41  Q
    |||||||||||||| ||||| ||||||||||| ||||||||    
T  43333666 tataaaataaagtcgaactggtttcatataagctataagtt 43333706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 45999390 - 45999334
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||| |||||||||||||| ||||||||||| |||||   |||||| ||||||||||    
T  45999390 ataagataaagtcaaactgctttcatataagctataaccaattttcgtaagctatca 45999334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 47002976 - 47002920
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||| ||| |||||| ||| |||||| || || ||||||||||||||||    
T  47002976 ataaaataaagttaaattgtttttatacaagttagaaattgttttcataagctatca 47002920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 10154189 - 10154242
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  10154189 ataaaataaagtcaaactgttttcatataagttataagctactttcataggcta 10154242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 4006682 - 4006737
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| |||||| ||||||| |||||||| |||||||||||||||    
T  4006682 ataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatc 4006737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32848699 - 32848650
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcata 50  Q
    |||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  32848699 tataaaataaagtcaatctgttttcatataagttataaatttttttcata 32848650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 33828617 - 33828670
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    ||||||||||||| ||||||| ||||||||||||||| |||| |||||||||||    
T  33828617 aaataaagtcaaattgttttcgtataagttataagttgttttaataagctatca 33828670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 1402964 - 1403020
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||| ||||| |||||||||||| ||||| || ||||||||||||||||    
T  1402964 ataaaataaagttaaactattttcatataagctataaattgttttcataagctatca 1403020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 25100014 - 25100066
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||| ||||||| |||||||||| |||||||||||| |||||||||||||||    
T  25100014 aaatagagtcaaattgttttcatagaagttataagttgttttcataagctatc 25100066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 22742334 - 22742389
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| |||||||||||||| |||||| |||||| ||||| ||||    
T  22742334 ataaaataaagtcaaattgttttcatataagctataagctatttttataagttatc 22742389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 1497950 - 1498004
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||||||| |||||||||   ||||||||| |||||    
T  1497950 taaaataaagtcaaactgttttcatatgagttataagaagttttcataaactatc 1498004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12757521 - 12757578
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||||  ||||||||||||||| |||| ||||| |||| |||||    
T  12757521 tataaaataaagtcaaactactttcatataagttatgagttgttttcgtaagttatca 12757578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 14656348 - 14656291
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||||||  ||||||||||||||| |||| ||||| |||| |||||    
T  14656348 tataaaataaagtcaaactactttcatataagttatgagttgttttcgtaagttatca 14656291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 323779 - 323823
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttatttt 46  Q
    |||||||||| |||||||||||||||||||||||| || ||||||    
T  323779 ataaaataaattcaaactgttttcatataagttatgagctatttt 323823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 2514670 - 2514722
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||||||||||||||  ||| |||| || |||||||||||||||||||||    
T  2514670 ataaaataaagtcaaactaattttatatgagctataagttattttcataagct 2514722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 9912100 - 9912052
Alignment:
Q  9 aaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||| ||||||| ||||||||| |||||||||||||||| ||||    
T  9912100 aaagtcaaattgttttcgtataagttacaagttattttcataagttatc 9912052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32975945 - 32976001
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||||||  ||| |||  ||||||| |||||||||||||||    
T  32975945 tataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctatc 32976001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33787848 - 33787792
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||| ||||||||| || |||||||||||||||||| | |||||||||| ||||    
T  33787848 tataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatc 33787792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 281950 - 281895
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||  |||||||||||||| |||||| | | |||||||||||||    
T  281950 ataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctatc 281895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 2117371 - 2117426
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||| ||||||||||| |||||||||||  |||||||| |||||||||| ||||    
T  2117371 ataaaacaaagtcaaactattttcatataatctataagttgttttcataagttatc 2117426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 3155144 - 3155199
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||| ||||||||||||||| |||||||  |||||| |||||||||||| ||||    
T  3155144 ataaaacaaagtcaaactgtttccatataacctataagctattttcataagatatc 3155199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 3204644 - 3204593
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    ||||||||||||| ||||||||||||||||| || || || |||||||||||    
T  3204644 ataaaataaagtcgaactgttttcatataagctagaaattgttttcataagc 3204593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 5623125 - 5623180
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||| ||||  ||||||||||||  |||||||| ||||||||||||||||    
T  5623125 taaaataaagccaaatagttttcatataaactataagttgttttcataagctatca 5623180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 22691622 - 22691567
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||| ||||| ||||| ||||||||||||||||||||  ||||||||||| |||||    
T  22691622 ataacataaattcaaattgttttcatataagttataacctattttcataacctatc 22691567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 25426138 - 25426193
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| || |||||| |||| |||||| |||||| ||||||||||    
T  25426138 ataaaataaagtcaaattgctttcatgtaagctataagctatttttataagctatc 25426193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 33558643 - 33558593
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  33558643 aataaagtcaaactgttttcata-aagaaataagtttttttcataagctatc 33558593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 9326928 - 9326966
Alignment:
Q  6 aataaagtcaaactgttttcatataagttataagttatt 44  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  9326928 aataaagtcaaactgtttttatataagctataagttatt 9326966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10452463 - 10452413
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataa 51  Q
    ||||||||||| ||||||| |||||||||||| |||||||| ||| |||||    
T  10452463 tataaaataaaatcaaactattttcatataagctataagttgtttccataa 10452413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 29274331 - 29274281
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    |||||||||||||||| |||||||||||||| |||||  | ||||||||||    
T  29274331 ataaaataaagtcaaattgttttcatataagctataaactgttttcataag 29274281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 31327697 - 31327655
Alignment:
Q  15 aaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||| |||||||||||| || ||||||||    
T  31327697 aaactgttttcatataagctataagttatttccaaaagctatc 31327655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 31776377 - 31776323
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    |||||||||||||||| ||||||  ||||| | ||||||| ||||||||||||||    
T  31776377 ataaaataaagtcaaattgtttttgtataattaataagttgttttcataagctat 31776323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 1432115 - 1432160
Alignment:
Q  11 agtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||| |||||||||| | |||||||||| ||||||||||||||    
T  1432115 agtcaaattgttttcatacatgttataagttgttttcataagctat 1432160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 2027508 - 2027455
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||||||||||| |||||||||||  |||||| | || ||||||||||    
T  2027508 ataaaataaagtcaaactattttcatataacctataagctgttctcataagcta 2027455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 7267646 - 7267597
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||||  || ||||||||| |||||||||||||| ||||||||||||    
T  7267646 taaaataagttctaactgttttaatataagttataagctattttcataag 7267597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 7485167 - 7485118
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    ||||||||| ||| | |||||||||||| |||||||| ||||||||||||    
T  7485167 aaataaagttaaatttttttcatataagctataagttgttttcataagct 7485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 9027545 - 9027582
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataag 39  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  9027545 ataaaataaagtcaaactgttttaatataagtaataag 9027582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10150355 - 10150302
Alignment:
Q  1 tataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||| || ||||| ||||||||||| ||||||||| | ||||||||||||    
T  10150355 tataaaatcaaatcaaattgttttcatatcagttataagatgttttcataagct 10150302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 5550100 - 5550148
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcata 50  Q
    |||| ||||||||||| |||||||||||||| |||||| | ||||||||    
T  5550100 ataacataaagtcaaattgttttcatataagctataagctgttttcata 5550148  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 7479209 - 7479169
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagtta 42  Q
    ||||| ||| |||||||||| ||||||||||||||||||||    
T  7479209 ataaagtaaggtcaaactgtcttcatataagttataagtta 7479169  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 7785844 - 7785808
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataa 38  Q
    |||||||||||||||||| |||||||||||| |||||    
T  7785844 ataaaataaagtcaaactcttttcatataagctataa 7785808  T

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Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 9093658 - 9093606
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagct 54  Q
    |||||||||||| ||| ||||||| |||||| |||||| | ||||||||||||    
T  9093658 ataaaataaagttaaattgttttcgtataagctataagctgttttcataagct 9093606  T

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Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 20671967 - 20671911
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatca 58  Q
    |||||||||||||||| ||||||| |||||| | ||| || ||||||||| ||||||    
T  20671967 ataaaataaagtcaaattgttttcgtataagctttaaattgttttcataaactatca 20671911  T

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Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 24670386 - 24670438
Alignment:
Q  3 taaaataaagtcaaactgttttcatataagttataagttattttcataagcta 55  Q
    |||||||||||| |||||||||  |||||| | |||||| |||||||||||||    
T  24670386 taaaataaagtccaactgtttttttataagctttaagttgttttcataagcta 24670438  T

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Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 27544 - 27599
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||| |||||||||||||  |||||||| ||||||||| |||||    
T  27544 ataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatc 27599  T

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Target: scaffold0508 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 9877 - 9822
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    ||||||| ||||||||  |||||||||||||||||| ||| ||||||||| |||||    
T  9877 ataaaattaagtcaaaaagttttcatataagttataggttgttttcataatctatc 9822  T

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Target: scaffold0153 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 6600 - 6557
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattt 45  Q
    |||||||||||||||||| |||||||||||| |||||| |||||    
T  6600 ataaaataaagtcaaactattttcatataagctataagctattt 6557  T

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Target: scaffold0153; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 13620 - 13577
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattt 45  Q
    |||||||||||||||||| |||||||||||| |||||| |||||    
T  13620 ataaaataaagtcaaactattttcatataagctataagctattt 13577  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 160074 - 160020
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctatc 57  Q
    |||||||||||||||||||  | ||||||||||||||| | |||||||||||||||    
T  160074 ataaaataaagtcaaactgaat-catataagttataagatgttttcataagctatc 160020  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 4325 - 4271
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataagctat 56  Q
    ||||||||||||||||| ||||||||||||  |||||| | |||| |||||||||    
T  4325 ataaaataaagtcaaaccgttttcatataaactataagctgttttaataagctat 4271  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 20147 - 20197
Alignment:
Q  2 ataaaataaagtcaaactgttttcatataagttataagttattttcataag 52  Q
    ||||||||||||||||| ||| ||||||||| ||| |||| ||||||||||    
T  20147 ataaaataaagtcaaacagttatcatataagctattagttgttttcataag 20197  T

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Target: scaffold0299 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 11457 - 11505
Alignment:
Q  5 aaataaagtcaaactgttttcatataagttataagttattttcataagc 53  Q
    ||||||||| ||| | ||||||||||| | |||||||||||||||||||    
T  11457 aaataaagttaaattattttcatataattcataagttattttcataagc 11505  T

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