View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9041_low_2 (Length: 921)

Name: NF9041_low_2
Description: NF9041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9041_low_2
NF9041_low_2
[»] chr3 (23 HSPs)
chr3 (467-902)||(47371199-47371647)
chr3 (16-337)||(47370889-47371209)
chr3 (338-448)||(8400876-8400986)
chr3 (344-448)||(50823725-50823829)
chr3 (344-448)||(50852031-50852135)
chr3 (338-448)||(7417819-7417929)
chr3 (338-448)||(22855908-22856018)
chr3 (338-448)||(35198786-35198896)
chr3 (341-448)||(22371730-22371837)
chr3 (344-446)||(34824583-34824685)
chr3 (338-448)||(52545342-52545452)
chr3 (338-446)||(55468020-55468129)
chr3 (364-448)||(37330608-37330692)
chr3 (338-446)||(43334057-43334165)
chr3 (364-448)||(30534903-30534987)
chr3 (343-457)||(29635894-29636009)
chr3 (346-448)||(19872484-19872586)
chr3 (364-448)||(37454745-37454829)
chr3 (343-407)||(48077983-48078047)
chr3 (377-457)||(25910658-25910738)
chr3 (343-445)||(42876241-42876343)
chr3 (349-400)||(25589253-25589304)
chr3 (356-446)||(30203657-30203744)
[»] chr7 (17 HSPs)
chr7 (338-457)||(38265229-38265348)
chr7 (338-457)||(35109712-35109831)
chr7 (338-448)||(37095211-37095321)
chr7 (338-448)||(34721855-34721965)
chr7 (343-446)||(38405157-38405260)
chr7 (338-448)||(21577099-21577209)
chr7 (338-446)||(16059356-16059464)
chr7 (338-445)||(41151193-41151301)
chr7 (338-448)||(245265-245375)
chr7 (338-445)||(12472142-12472249)
chr7 (338-457)||(45278473-45278592)
chr7 (343-446)||(18116947-18117050)
chr7 (344-444)||(11216796-11216896)
chr7 (349-448)||(28407540-28407635)
chr7 (338-446)||(48176420-48176529)
chr7 (340-448)||(23028706-23028814)
chr7 (20-54)||(28036608-28036642)
[»] chr6 (10 HSPs)
chr6 (337-457)||(20685345-20685465)
chr6 (338-448)||(35163751-35163861)
chr6 (338-448)||(19686828-19686938)
chr6 (343-448)||(17948706-17948811)
chr6 (344-446)||(15070152-15070254)
chr6 (338-448)||(2711741-2711845)
chr6 (338-440)||(14505533-14505634)
chr6 (343-420)||(24336641-24336718)
chr6 (119-177)||(34575856-34575914)
chr6 (338-371)||(14496373-14496406)
[»] chr1 (16 HSPs)
chr1 (338-457)||(30370052-30370171)
chr1 (343-456)||(22024129-22024242)
chr1 (338-446)||(30054445-30054553)
chr1 (338-448)||(45324027-45324137)
chr1 (346-448)||(14498080-14498182)
chr1 (344-457)||(12025208-12025321)
chr1 (344-449)||(30850840-30850945)
chr1 (343-448)||(20014484-20014589)
chr1 (338-446)||(21090136-21090244)
chr1 (350-448)||(4573412-4573510)
chr1 (343-457)||(33762532-33762646)
chr1 (338-457)||(33763246-33763365)
chr1 (361-440)||(35371754-35371833)
chr1 (376-446)||(35618034-35618104)
chr1 (389-457)||(17015192-17015260)
chr1 (347-446)||(44438553-44438652)
[»] chr2 (23 HSPs)
chr2 (338-448)||(45136971-45137081)
chr2 (344-448)||(17136414-17136518)
chr2 (338-448)||(25987662-25987773)
chr2 (338-448)||(36380133-36380243)
chr2 (346-448)||(36836330-36836432)
chr2 (338-448)||(40156061-40156171)
chr2 (347-448)||(2754052-2754153)
chr2 (344-448)||(44650420-44650524)
chr2 (338-457)||(21637918-21638037)
chr2 (338-440)||(6672802-6672904)
chr2 (338-448)||(10745233-10745343)
chr2 (343-448)||(558440-558545)
chr2 (343-448)||(26690180-26690285)
chr2 (343-447)||(30372682-30372786)
chr2 (343-457)||(5039446-5039560)
chr2 (343-448)||(2357077-2357181)
chr2 (343-448)||(3200907-3201012)
chr2 (350-448)||(13047157-13047252)
chr2 (343-448)||(33066616-33066721)
chr2 (350-448)||(21487181-21487280)
chr2 (338-448)||(7860147-7860257)
chr2 (400-448)||(2098827-2098875)
chr2 (351-446)||(4553561-4553657)
[»] chr8 (21 HSPs)
chr8 (338-446)||(17095571-17095679)
chr8 (338-457)||(19723332-19723451)
chr8 (343-457)||(11404027-11404141)
chr8 (343-448)||(32296640-32296745)
chr8 (347-448)||(22711539-22711640)
chr8 (338-446)||(28739564-28739672)
chr8 (338-457)||(29767209-29767326)
chr8 (338-448)||(4840161-4840271)
chr8 (350-448)||(36261679-36261777)
chr8 (350-445)||(43288105-43288200)
chr8 (346-429)||(21355004-21355087)
chr8 (350-457)||(41553318-41553425)
chr8 (343-409)||(24475036-24475102)
chr8 (363-446)||(11909426-11909509)
chr8 (346-448)||(30682868-30682969)
chr8 (343-448)||(11610306-11610411)
chr8 (338-393)||(27881044-27881099)
chr8 (338-393)||(28021225-28021280)
chr8 (389-448)||(27879561-27879620)
chr8 (389-448)||(28019742-28019801)
chr8 (118-177)||(43269837-43269896)
[»] chr4 (23 HSPs)
chr4 (343-446)||(51066519-51066622)
chr4 (338-446)||(46494401-46494509)
chr4 (338-448)||(36192562-36192672)
chr4 (338-448)||(51713966-51714076)
chr4 (343-448)||(7173586-7173691)
chr4 (346-448)||(29576444-29576546)
chr4 (343-448)||(30970385-30970490)
chr4 (345-457)||(55231715-55231827)
chr4 (338-445)||(32139185-32139292)
chr4 (338-448)||(50905769-50905879)
chr4 (338-419)||(8740469-8740550)
chr4 (338-448)||(39863779-39863889)
chr4 (355-448)||(676766-676859)
chr4 (338-448)||(47626994-47627104)
chr4 (346-457)||(2570230-2570341)
chr4 (373-448)||(22304092-22304167)
chr4 (343-407)||(41523423-41523487)
chr4 (350-457)||(4080544-4080651)
chr4 (344-420)||(22423403-22423479)
chr4 (355-447)||(51279035-51279127)
chr4 (338-397)||(50399694-50399753)
chr4 (296-333)||(4635217-4635254)
chr4 (396-441)||(28202598-28202643)
[»] chr5 (8 HSPs)
chr5 (343-457)||(17064349-17064463)
chr5 (338-446)||(20983006-20983114)
chr5 (338-448)||(37976567-37976681)
chr5 (358-448)||(41910865-41910955)
chr5 (350-444)||(31673863-31673956)
chr5 (344-448)||(5009418-5009521)
chr5 (350-409)||(18303350-18303409)
chr5 (335-392)||(32326560-32326617)
[»] scaffold0021 (1 HSPs)
scaffold0021 (338-440)||(107700-107802)
[»] scaffold0691 (1 HSPs)
scaffold0691 (343-407)||(7011-7075)


Alignment Details
Target: chr3 (Bit Score: 363; Significance: 0; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 467 - 902
Target Start/End: Original strand, 47371199 - 47371647
Alignment:
Q  467 gtttataacatgttgataatatgtacaaatttgaaataaatctaaatttatttgatatagtgttgagatctatcaaaattaacgttttaaaatcttttat 566  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47371199 gtttataacatgttgataatatgtacaaatttgaaataaatctaaatttatttgatatagtgttgagatctatcaaacttaacgttttaaaatcttttat 47371298  T
Q  567 tttatgatgttactcttgatgcaactcaacaatgtacaaaatgattttaatttatgcagagagagattaaaaaa-------------tttttaaacttca 653  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||||||||||||    
T  47371299 tttatgatgttactcttgatgcaactcaacaatgtacaaaatgattttaatttatgcagagagagattaaaaaataacaacgaactttttttaaacttca 47371398  T
Q  654 acaaatgatgctgatcttgttcgacatcgcatattaggacgtgagtcgagttatttaccttgatattggcaagggtttcattcgtcacatatgccttgag 753  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47371399 acaaatgatgctgatcttgttcgacatcacatattaggacgtgagtcgagttatttaccttgatattggcaagggtttcattcgtcacatatgccttgag 47371498  T
Q  754 ttgctcttagtttcaagtactaacaactttcttgtcnnnnnnnnnngtactaactcttacatcattcacgaacaatacataacatatataacgaaactgg 853  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47371499 ttgctcttagtttcaagtactaacaactttcttgtcaaaaaaaaaagtactaactcttacatcattcacgaacaatacataacatatataacgaaactgg 47371598  T
Q  854 aattggtttcagatctttctgtctgcatgcacaggagggacctcatata 902  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47371599 aattggtttcagatctttttgtctgcatgcacaggagggacctcatata 47371647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 337
Target Start/End: Original strand, 47370889 - 47371209
Alignment:
Q  16 ggacatcaaaaacatatttaaccatatatatttatatatgagtatgtatttcaaattatctatacatgaagaatcaaattacattgacgcaatgttacac 115  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  47370889 ggacatcaaaaacatatttaaccatatatatttatatatgagtacgtatttcaaattatctatacatgaagaatcaaattacattggtgcaatgttacac 47370988  T
Q  116 tgctcaataacattttaacgaatacaaattttataaaatccaccgttggattgaaagtttataatatacgcatcgtccctacggaattttattaaaaagt 215  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47370989 tgcacaataacattttaacgaatacaaattttataaaatccaccgttggattgaaaatttataatatacgcatcgtccctacggaattttattaaaaagt 47371088  T
Q  216 aaaatcatttaatatgctattaagatttgttaagattactggcattcaacnnnnnnnntgcataacattttatttgacaaatattttttaaatttgaccg 315  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||    
T  47371089 aaaatcatttaatatgctattaagatttgttaagattaatggcattcaacaaaaaaac-gcataacattttatttgacaaatattttttaaatttgaccg 47371187  T
Q  316 ttgaattaaaagtttataacat 337  Q
    ||||||||||||||||||||||    
T  47371188 ttgaattaaaagtttataacat 47371209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 8400876 - 8400986
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  8400876 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 8400975  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  8400976 accctaaaatt 8400986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 344 - 448
Target Start/End: Original strand, 50823725 - 50823829
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||||||    
T  50823725 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 50823824  T
Q  444 aaatt 448  Q
    |||||    
T  50823825 aaatt 50823829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 50852135 - 50852031
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||||||    
T  50852135 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcacccta 50852036  T
Q  444 aaatt 448  Q
    |||||    
T  50852035 aaatt 50852031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 7417819 - 7417929
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||| |||||||||||||    
T  7417819 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttcactgccttggactggggcaccatcccctc 7417918  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  7417919 accctaaaatt 7417929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 22855908 - 22856018
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| | ||| |||||||||||||||||||||||    
T  22855908 ccccgctagtgtctttggagggaggtaaatgtaattacctttgtaagtgctctttaagcccaaaggtcttccctgccttggactggagcaccatcccctc 22856007  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  22856008 accctaaaatt 22856018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 35198786 - 35198896
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  35198786 ccccactaatgcctttgcagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggagcaccatcccctc 35198885  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  35198886 accctaaaatt 35198896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 341 - 448
Target Start/End: Complemental strand, 22371837 - 22371730
Alignment:
Q  341 ctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacc 440  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||| |||||| ||||||||||||||||    
T  22371837 ctcttgtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgaacccgaagatcttccctgctttagactggggcaccatcccctcacc 22371738  T
Q  441 ctaaaatt 448  Q
    ||||||||    
T  22371737 ctaaaatt 22371730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 344 - 446
Target Start/End: Original strand, 34824583 - 34824685
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||| |  || ||||||||| |||||||||||||||||||    
T  34824583 tagtgcctttgaagggaggtaaatgtaattatctttgtaagtgctctttgatcccgaaggtcttcccggccttggactggggcaccatcccctcacccta 34824682  T
Q  444 aaa 446  Q
    |||    
T  34824683 aaa 34824685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 52545342 - 52545452
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||  |||||||||||||||| ||| |||||||||  |||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  52545342 ccccgctagtgcctttaaagggaggtaaatgtaaatacttttgtaagtagtctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 52545441  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  52545442 accctaaaatt 52545452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 55468020 - 55468129
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgag-cccgaaggtctttcatgctttggactggagcaccatcccct 436  Q
    |||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||   ||| ||||||||| ||||||||||||    
T  55468020 ccccactaatgcgtttggagggaggtaaatgtaaatacctttgtaagtgctctttgagccccgaaggtcttctctgccttggactggggcaccatcccct 55468119  T
Q  437 caccctaaaa 446  Q
    ||||||||||    
T  55468120 caccctaaaa 55468129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 37330692 - 37330608
Alignment:
Q  364 aaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    |||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||||||| ||||||||||||||||||||||||    
T  37330692 aaatgtaattacctttgtaagtgctctttgagtccgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaatt 37330608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 338 - 446
Target Start/End: Complemental strand, 43334165 - 43334057
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||| ||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||| | ||| ||||||||| | |||||||||||    
T  43334165 ccccgctagtgtcttgggagggaggtaaatgtaaatacttttgtaagtgctatttgagcccgaaggtcttccctgccttggactggggtaccatcccctc 43334066  T
Q  438 accctaaaa 446  Q
    |||||||||    
T  43334065 accctaaaa 43334057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 30534987 - 30534903
Alignment:
Q  364 aaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    ||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||| | ||||||||||||||||||||||    
T  30534987 aaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttggactggggtaccatcccctcaccctaaaatt 30534903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 343 - 457
Target Start/End: Original strand, 29635894 - 29636009
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcacc-atcccctcaccc 441  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||| ||||| ||| ||||| || ||||||| |    
T  29635894 ctagtgcctttgaagggaggtaaatgtaattacctttgtaagtgctctttaagcccgaatgtcttccctgccttggagtggggcaccaattccctcacgc 29635993  T
Q  442 taaaattaatgtaacc 457  Q
    |||||||  |||||||    
T  29635994 taaaatttctgtaacc 29636009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 346 - 448
Target Start/End: Complemental strand, 19872586 - 19872484
Alignment:
Q  346 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaa 445  Q
    ||||||||||||| |||||||  ||||||||||||||||| ||||||||  ||||||||||| | ||  ||||||||| |||||||||||||| ||||||    
T  19872586 gtgcctttggaggaaggtaaaattaattacctttgtaagtactctttgaatccgaaggtcttccctgtcttggactggggcaccatcccctcatcctaaa 19872487  T
Q  446 att 448  Q
    |||    
T  19872486 att 19872484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 37454829 - 37454745
Alignment:
Q  364 aaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    |||| ||||||||||||||||||||||||||||||||||||||| | | | || || ||| ||||||||||||||||||||||||    
T  37454829 aaatataattacctttgtaagtgctctttgagcccgaaggtcttccctaccttagattggggcaccatcccctcaccctaaaatt 37454745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 48078047 - 48077983
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctt 407  Q
    |||||||||||||||| |||||||||||| || |||||||||||||||||||||| |||||||||    
T  48078047 ctagtgcctttggaggaaggtaaatgtaaatatctttgtaagtgctctttgagcctgaaggtctt 48077983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 377 - 457
Target Start/End: Complemental strand, 25910738 - 25910658
Alignment:
Q  377 tttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaattaatgtaacc 457  Q
    ||||||||||||||||||| |||||| |||| | ||| ||||||||  ||||||||||||||||||||||||  |||||||    
T  25910738 tttgtaagtgctctttgagtccgaagatcttccctgccttggactgaggcaccatcccctcaccctaaaatttttgtaacc 25910658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 343 - 445
Target Start/End: Original strand, 42876241 - 42876343
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||||| |  ||| ||||| | |   ||||||| | ||||||||| ||||||||    
T  42876241 ctagtgtctttagatggaggtaaatgtaattacctttgtaagtgctctttgaacttgaatgtcttccctatcttggactagggcaccatcctctcaccct 42876340  T
Q  443 aaa 445  Q
    |||    
T  42876341 aaa 42876343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 349 - 400
Target Start/End: Original strand, 25589253 - 25589304
Alignment:
Q  349 cctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccga 400  Q
    |||||||| |||||||||||||| |||||| |||||||||||||||| ||||    
T  25589253 cctttggaaggaggtaaatgtaaataccttagtaagtgctctttgagtccga 25589304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 356 - 446
Target Start/End: Complemental strand, 30203744 - 30203657
Alignment:
Q  356 agggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaa 446  Q
    ||||||||||||||||  |||||||||| || ||||||||| ||||||| |||| ||  ||| ||||| ||||||||||||||| ||||||    
T  30203744 agggaggtaaatgtaa--acctttgtaaatgttctttgagctcgaaggt-tttcctgtcttgaactggggcaccatcccctcactctaaaa 30203657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 1e-46; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 338 - 457
Target Start/End: Complemental strand, 38265348 - 38265229
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  38265348 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 38265249  T
Q  438 accctaaaattaatgtaacc 457  Q
    ||||||||||| ||||||||    
T  38265248 accctaaaatttatgtaacc 38265229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 338 - 457
Target Start/End: Original strand, 35109712 - 35109831
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  35109712 ccccactagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 35109811  T
Q  438 accctaaaattaatgtaacc 457  Q
    |||||||||||  |||||||    
T  35109812 accctaaaatttttgtaacc 35109831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 37095321 - 37095211
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  37095321 ccccgctagtgtctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 37095222  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  37095221 accctaaaatt 37095211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 34721855 - 34721965
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| ||||||| | |||||||||||||    
T  34721855 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggacttccctgccttggactcgggcaccatcccctc 34721954  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  34721955 accctaaaatt 34721965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 38405260 - 38405157
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| | ||| ||||||||| ||||||||||||||||||    
T  38405260 ctagtgcctttggagggaggtaaatgtaattatctttgtaagtgctctttgaacccgaaggtcttccctgccttggactggggcaccatcccctcaccct 38405161  T
Q  443 aaaa 446  Q
    ||||    
T  38405160 aaaa 38405157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 21577209 - 21577099
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | ||| ||||||||| |||||||||||||    
T  21577209 ccccactaatgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagtccgaaggtcttccctgccttggactggggcaccatcccctc 21577110  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  21577109 accctaaaatt 21577099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 338 - 446
Target Start/End: Complemental strand, 16059464 - 16059356
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| | | | ||||||||| |||||||||||||    
T  16059464 ccccgctagtgcctttgcagggaggtaaatgtaattacctttgtaagtgctctctgagcccgaaggtcttccctaccttggactggggcaccatcccctc 16059365  T
Q  438 accctaaaa 446  Q
    |||||||||    
T  16059364 accctaaaa 16059356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 41151193 - 41151301
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattaccttt-gtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccct 436  Q
    |||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||    
T  41151193 ccccgctagtgtctttggagggaggtaaatgtaattaccttttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccct 41151292  T
Q  437 caccctaaa 445  Q
    |||||||||    
T  41151293 caccctaaa 41151301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 245375 - 245265
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  245375 ccccgctagtgcccttggagggaggtaaatgtaattatctttgtaaacgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 245276  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  245275 accctaaaatt 245265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 12472142 - 12472249
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| | ||  ||||||||| | |||||||||||    
T  12472142 ccccactagtgcctttggagggaggtaaatataattacctttgtaagtgctctttgagcacgaaggtcttccctgtcttggactggggtaccatcccctc 12472241  T
Q  438 accctaaa 445  Q
    ||||||||    
T  12472242 accctaaa 12472249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 338 - 457
Target Start/End: Original strand, 45278473 - 45278592
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||| | |||||| ||||| | ||| |||||||||||||||||||||||    
T  45278473 ccccgctagtgcctttgaagggaagtaaatgtaattatctttgtaagtgctctttaaacccgaatgtcttccctgccttggactggagcaccatcccctc 45278572  T
Q  438 accctaaaattaatgtaacc 457  Q
    |||||||||||  |||||||    
T  45278573 accctaaaatttttgtaacc 45278592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 18117050 - 18116947
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||  ||||| |||| | ||| ||||||||| ||||||||||||||||||    
T  18117050 ctagtgcctttagagggaggtaaatgtaattacctttgtaggtgctctttgaggtcgaagatcttccctgccttggactggggcaccatcccctcaccct 18116951  T
Q  443 aaaa 446  Q
    ||||    
T  18116950 aaaa 18116947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 444
Target Start/End: Original strand, 11216796 - 11216896
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   | ||||||||| | ||| ||| |||||||||||    
T  11216796 tagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttctctactttggactagggcatcattccctcacccta 11216895  T
Q  444 a 444  Q
    |    
T  11216896 a 11216896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 349 - 448
Target Start/End: Original strand, 28407540 - 28407635
Alignment:
Q  349 cctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||    | || ||||| ||| ||||||||||||||||||||||||    
T  28407540 cctttagagggaggtaaatgtaaatacttttgtaagtgctctttgagcccgaaggtc----aagccttggattggggcaccatcccctcaccctaaaatt 28407635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 48176420 - 48176529
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcat-gctttggactggagcaccatcccct 436  Q
    |||| |||||||||||||| |||||||||||||| ||| |||||||||| | |||||||| |||||| || | |  | ||||||||| ||||||||||||    
T  48176420 ccccgctagtgcctttggaaggaggtaaatgtaaatacttttgtaagtgttttttgagccggaaggttttccctccccttggactggggcaccatcccct 48176519  T
Q  437 caccctaaaa 446  Q
    ||||||||||    
T  48176520 caccctaaaa 48176529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 448
Target Start/End: Original strand, 23028706 - 23028814
Alignment:
Q  340 cctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcac 439  Q
    |||||| ||||||| |||||| |||||||||||||||||| |||||| | ||||| |||||||| ||| | | | || |||||   |||||||| ||||     
T  23028706 cctctaatgcctttagagggatgtaaatgtaattacctttataagtgttttttgaacccgaaggccttccctaccttagactgagacaccatcctctcat 23028805  T
Q  440 cctaaaatt 448  Q
    |||||||||    
T  23028806 cctaaaatt 23028814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 28036608 - 28036642
Alignment:
Q  20 atcaaaaacatatttaaccatatatatttatatat 54  Q
    ||||||||||||||||||||||||||| |||||||    
T  28036608 atcaaaaacatatttaaccatatatatatatatat 28036642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 2e-42; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 337 - 457
Target Start/End: Original strand, 20685345 - 20685465
Alignment:
Q  337 tcccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccct 436  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||| |    
T  20685345 tccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatccctt 20685444  T
Q  437 caccctaaaattaatgtaacc 457  Q
    ||||||||||||  |||||||    
T  20685445 caccctaaaatttttgtaacc 20685465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 35163861 - 35163751
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  35163861 ccccactaatgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 35163762  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  35163761 accctaaaatt 35163751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 19686938 - 19686828
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | || |||||| ||| |||||||||    
T  19686938 cccctctagtgcctttgtagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatctttcctcccttagactggggcatcatcccctc 19686839  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  19686838 accctaaaatt 19686828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 17948706 - 17948811
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| | ||  |||||||||  ||||||||||||||| |    
T  17948706 ctagtgtctttggagagaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgtcttggactgggacaccatcccctcacctt 17948805  T
Q  443 aaaatt 448  Q
    ||||||    
T  17948806 aaaatt 17948811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 344 - 446
Target Start/End: Original strand, 15070152 - 15070254
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    |||||||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||||| | ||| || |||||| ||||||||||||||||| |    
T  15070152 tagtgcctttggagggaggtaaatataattacatttgtaagtgttcattgagcccgaaggtcttccctgccttagactggggcaccatcccctcacccaa 15070251  T
Q  444 aaa 446  Q
    |||    
T  15070252 aaa 15070254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 2711845 - 2711741
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||| |||||      ||||||||||||    
T  2711845 ccccactagtgcttttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgccttgga------caccatcccctc 2711752  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  2711751 accctaaaatt 2711741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 14505634 - 14505533
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||| |  |||||| || ||||| |||| | ||| ||||||||| |||||||||||||    
T  14505634 ccccgctagtgcttttggagggaggtaaatgtaat-acctttgtaaatattctttgggcgcgaagatcttccgtgccttggactggggcaccatcccctc 14505536  T
Q  438 acc 440  Q
    |||    
T  14505535 acc 14505533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 343 - 420
Target Start/End: Original strand, 24336641 - 24336718
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggac 420  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||| | |||||||| |||| |||| | ||| ||||||    
T  24336641 ctagtccctttggagggaggtaaatgtaaatacttttgtaagtgttttttgagcctgaagatcttccctgccttggac 24336718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 34575914 - 34575856
Alignment:
Q  119 tcaataacattttaacgaatacaaattttataaaatccaccgttggattgaaagtttat 177  Q
    |||||||| ||||||| |||| |||||||||||||| ||| |||||||||||| |||||    
T  34575914 tcaataacgttttaactaatataaattttataaaattcacagttggattgaaaatttat 34575856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 338 - 371
Target Start/End: Original strand, 14496373 - 14496406
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaa 371  Q
    |||| |||||||||||||||||||||||||||||    
T  14496373 ccccactagtgcctttggagggaggtaaatgtaa 14496406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 8e-42; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 338 - 457
Target Start/End: Complemental strand, 30370171 - 30370052
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  30370171 ccccactagtgtctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 30370072  T
Q  438 accctaaaattaatgtaacc 457  Q
    ||| ||||||| ||||||||    
T  30370071 accttaaaattcatgtaacc 30370052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 22024129 - 22024242
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||||||| ||||||||||||||||||    
T  22024129 ctagtgcctttggatggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttctctgccttggactggggcaccatcccctcaccct 22024228  T
Q  443 aaaattaatgtaac 456  Q
    |||||| |||||||    
T  22024229 aaaatttatgtaac 22024242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 338 - 446
Target Start/End: Complemental strand, 30054553 - 30054445
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  30054553 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 30054454  T
Q  438 accctaaaa 446  Q
    |||||||||    
T  30054453 accctaaaa 30054445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 45324027 - 45324137
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||    
T  45324027 ccccgctagtgcttttggagggaggtaaatgtaaatacctttgtaagtgctccttgagcccgaaggtcttccctgctttggactggggcaccatcccctc 45324126  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  45324127 accctaaaatt 45324137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 346 - 448
Target Start/End: Complemental strand, 14498182 - 14498080
Alignment:
Q  346 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaa 445  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| | ||| ||||||||| || ||||||||||||||||||    
T  14498182 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagaccaaaggtcttccctgccttggactggggcgccatcccctcaccctaaa 14498083  T
Q  446 att 448  Q
    |||    
T  14498082 att 14498080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 344 - 457
Target Start/End: Original strand, 12025208 - 12025321
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    ||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||| | ||| ||||||||| |||||| ||||||||||||    
T  12025208 tagtgcctttggaggaaggtaaatgtaattacctttgtaagtactatttgagcccgaaggtcttccctgccttggactggggcaccaccccctcacccta 12025307  T
Q  444 aaattaatgtaacc 457  Q
    |||||  |||||||    
T  12025308 aaatttttgtaacc 12025321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 344 - 449
Target Start/End: Complemental strand, 30850945 - 30850840
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||| ||  ||||||||| |||||||||||||||||||    
T  30850945 tagtgtctttggagggaggtaaatataattgcctttgtaagtgctctttgaacccgaaggtctttcctgtcttggactggggcaccatcccctcacccta 30850846  T
Q  444 aaatta 449  Q
    ||||||    
T  30850845 aaatta 30850840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 20014484 - 20014589
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| | ||| ||||||||  ||||||||||||||||||    
T  20014484 ctagtacctttggagggaggtaaatgtaattacatttgtaaatgctctttgagcctgaaggtcttccctgccttggactgaggcaccatcccctcaccct 20014583  T
Q  443 aaaatt 448  Q
    ||||||    
T  20014584 aaaatt 20014589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 21090136 - 21090244
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  21090136 ccccgctagtgccgttggagggaggtaaatgtaaatacatttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 21090235  T
Q  438 accctaaaa 446  Q
    || ||||||    
T  21090236 actctaaaa 21090244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 4573412 - 4573510
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | || |||||||||  |||| |||||||||||||||||||    
T  4573412 ctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgttttggactgaggcactatcccctcaccctaaaatt 4573510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 343 - 457
Target Start/End: Complemental strand, 33762646 - 33762532
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||| || || | ||| ||||||||| ||| ||||||||||||||    
T  33762646 ctagtgcctttagagggaggcaaatgtaattacctttgtaagtgttttttgagcccgaaagttttccctgccttggactggggcatcatcccctcaccct 33762547  T
Q  443 aaaattaatgtaacc 457  Q
    ||||||  |||||||    
T  33762546 aaaatttttgtaacc 33762532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 338 - 457
Target Start/End: Complemental strand, 33763365 - 33763246
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||| || || | ||| ||| ||||| ||| |||||||||    
T  33763365 ccccgctagtgcctttagagggaggcaaatgtaattacctttgtaagtgttttttgagcccgaaagttttccctgccttgaactggggcatcatcccctc 33763266  T
Q  438 accctaaaattaatgtaacc 457  Q
    |||||||||||  |||||||    
T  33763265 accctaaaatttctgtaacc 33763246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 361 - 440
Target Start/End: Complemental strand, 35371833 - 35371754
Alignment:
Q  361 ggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacc 440  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||| ||||||||||||||||    
T  35371833 ggtaaatgtaattacctttgtaagtgctctttgagcccgaagttcttccctgccttggactggggcaccatcccctcacc 35371754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 376 - 446
Target Start/End: Original strand, 35618034 - 35618104
Alignment:
Q  376 ctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaa 446  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| | ||||||||||||||||||||    
T  35618034 ctttgtaagtgctctttgagcccgaaggtcttccttgctttggactggggtaccatcccctcaccctaaaa 35618104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 389 - 457
Target Start/End: Original strand, 17015192 - 17015260
Alignment:
Q  389 ctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaattaatgtaacc 457  Q
    ||||||||||||||||||| | ||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  17015192 ctttgagcccgaaggtcttccctgctttggactggggcaccatcccctcatcctaaaatttatgtaacc 17015260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 446
Target Start/End: Complemental strand, 44438652 - 44438553
Alignment:
Q  347 tgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaa 446  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| |   |||||||||| | ||| ||| ||||| | ||||||||||| || |||||    
T  44438652 tgcctttggagggaggtaaatgtaattacttttgtaagtgttctttaaattcgaaggtcttccctgccttgaactggggtaccatcccctcgccttaaaa 44438553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 3e-41; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 45137081 - 45136971
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||| ||    
T  45137081 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccttc 45136982  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  45136981 accctaaaatt 45136971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 344 - 448
Target Start/End: Original strand, 17136414 - 17136518
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |  || ||||||||| |||||||||||||||||||    
T  17136414 tagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccccgccttggactggggcaccatcccctcacccta 17136513  T
Q  444 aaatt 448  Q
    |||||    
T  17136514 aaatt 17136518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 25987773 - 25987662
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttt-catgctttggactggagcaccatcccct 436  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| |||| |||| ||||||||||||    
T  25987773 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagtccgaaggtctttccctgccttggtctggggcaccatcccct 25987674  T
Q  437 caccctaaaatt 448  Q
    ||||||||||||    
T  25987673 caccctaaaatt 25987662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 36380243 - 36380133
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | | | ||||||||  |||||||||||||    
T  36380243 ccccgctagtgcctttggagggaggtaaatgtaattccctttgtaagtgctctttgagcccgaaggtcttccctaccttggactgaggcaccatcccctc 36380144  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  36380143 accctaaaatt 36380133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 346 - 448
Target Start/End: Complemental strand, 36836432 - 36836330
Alignment:
Q  346 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaa 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||||||||| |||||||||||||||| ||||    
T  36836432 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttggactggggcaccatcccctcaccttaaa 36836333  T
Q  446 att 448  Q
    |||    
T  36836332 att 36836330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 40156061 - 40156171
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | | ||| ||||| |||||||||||||    
T  40156061 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctaccttgaactggggcaccatcccctc 40156160  T
Q  438 accctaaaatt 448  Q
    ||| |||||||    
T  40156161 accataaaatt 40156171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 347 - 448
Target Start/End: Complemental strand, 2754153 - 2754052
Alignment:
Q  347 tgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaa 446  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| | ||| ||||||||| ||||||||||||||||||||||    
T  2754153 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 2754054  T
Q  447 tt 448  Q
    ||    
T  2754053 tt 2754052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 344 - 448
Target Start/End: Original strand, 44650420 - 44650524
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| | ||| |||||| || |||||||||||||||||||    
T  44650420 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagtccgaagatcttccctgccttggaccggggcaccatcccctcacccta 44650519  T
Q  444 aaatt 448  Q
    |||||    
T  44650520 aaatt 44650524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 338 - 457
Target Start/End: Original strand, 21637918 - 21638037
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||   ||| ||||||| | |||||||||||||    
T  21637918 ccccgctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccaaaggtcttctctgccttggactagggcaccatcccctc 21638017  T
Q  438 accctaaaattaatgtaacc 457  Q
    |||||||||||  |||||||    
T  21638018 accctaaaatttttgtaacc 21638037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 6672904 - 6672802
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  6672904 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtacgcgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 6672805  T
Q  438 acc 440  Q
    |||    
T  6672804 acc 6672802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 10745343 - 10745233
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| || | ||| ||||||||| |||||||||||||    
T  10745343 ccccgctagtgcctttagagggaggtaaatgtaattatctttgtaagtgctctttgaacccgaaggtattccctgccttggactggggcaccatcccctc 10745244  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  10745243 accctaaaatt 10745233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 558545 - 558440
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| | | | ||||| ||| ||||||||||||||||||    
T  558545 ctagtgcctttggagggaggtaaatgtaattacttttgtaagtgctctttgagctagaaggtcttcccttccttggaatggggcaccatcccctcaccct 558446  T
Q  443 aaaatt 448  Q
    ||||||    
T  558445 aaaatt 558440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 26690180 - 26690285
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||| |  |||||||||| | ||| ||||||||  ||||||||||||||||||    
T  26690180 ctagtgcttttggagggaggtaaatgtaattacctttgtaagtgatctttgtgttcgaaggtcttccctgccttggactgaggcaccatcccctcaccct 26690279  T
Q  443 aaaatt 448  Q
    ||||||    
T  26690280 aaaatt 26690285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 30372786 - 30372682
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||||||||||| |||||||||||||| || |||||| ||||||||||||||||||||||||| ||||| ||| ||||| | ||||| ||||||||||    
T  30372786 ctagtgcctttggaaggaggtaaatgtaaatatctttgttagtgctctttgagcccgaaggtcttccatgccttgaactggggtaccataccctcaccct 30372687  T
Q  443 aaaat 447  Q
    |||||    
T  30372686 aaaat 30372682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 343 - 457
Target Start/End: Original strand, 5039446 - 5039560
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| | | | ||||||| | ||||||||||||||| ||    
T  5039446 ctagtgcttttagagggaggtaaacgtaattacctttgtaagtgctctttgagcccgaagatcttccctaccttggactagggcaccatcccctcactct 5039545  T
Q  443 aaaattaatgtaacc 457  Q
    ||||||  |||||||    
T  5039546 aaaatttttgtaacc 5039560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 2357181 - 2357077
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||| ||||||||||||||||||||||| |||| |||||| |||| ||||||  |||||||||| ||||| ||||||||| ||||||||||||||||||    
T  2357181 ctagtacctttggagggaggtaaatgtaaataccattgtaaatgct-tttgagttcgaaggtcttccatgccttggactggggcaccatcccctcaccct 2357083  T
Q  443 aaaatt 448  Q
    ||||||    
T  2357082 aaaatt 2357077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 3200907 - 3201012
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||   ||| || |||||| |||||||| |||| ||||    
T  3200907 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgttctttgagcctgaagatcttctctgccttagactggggcaccatctcctcgccct 3201006  T
Q  443 aaaatt 448  Q
    ||||||    
T  3201007 aaaatt 3201012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 350 - 448
Target Start/End: Complemental strand, 13047252 - 13047157
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    |||||||||||||||||| ||||||||||   ||||||||||||||||| ||| |||| | ||| ||||||||||||||||||||||||||||||||||    
T  13047252 ctttggagggaggtaaatataattacctt---aagtgctctttgagcccaaagatcttccctgccttggactggagcaccatcccctcaccctaaaatt 13047157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 33066616 - 33066721
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||| |||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||   | | ||||||||| |||||||||||||| |||    
T  33066616 ctagtgtctttggagagaggtaaatgtaaatatctttgtaagtgctctttgagcctgaaggtcttctctaccttggactggggcaccatcccctcatcct 33066715  T
Q  443 aaaatt 448  Q
    ||||||    
T  33066716 aaaatt 33066721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 21487181 - 21487280
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccat-cccctcaccctaaaatt 448  Q
    |||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||||| | ||| || |||||| ||||||| ||||||| |||||||||    
T  21487181 ctttggagggaggtaaatgtaaatatttttgtaagtgctctttgagcccgaaagtcttccctgccttagactggggcaccatccccctcatcctaaaatt 21487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 7860257 - 7860147
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||| | ||   ||| ||||||||  ||| |||||||||    
T  7860257 ccccgctagtgcctttggagggaggtaaatgtacatacatttgtaagtgttctttgagcccgaagattttctctgccttggactgaggcatcatcccctc 7860158  T
Q  438 accctaaaatt 448  Q
     ||||||||||    
T  7860157 tccctaaaatt 7860147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 2098875 - 2098827
Alignment:
Q  400 aaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    |||||||| | ||| ||||||||| ||||||||||||||||||||||||    
T  2098875 aaggtcttccctgccttggactggggcaccatcccctcaccctaaaatt 2098827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 4553657 - 4553561
Alignment:
Q  351 tttggagg-gaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaa 446  Q
    |||||||| ||||||||| ||| ||| ||||||||| ||||||||| ||| |||||||   ||  || |||||| ||||||||||||||| ||||||    
T  4553657 tttggaggagaggtaaatataaatacatttgtaagtactctttgagtccggaggtcttctctgtcttagactggggcaccatcccctcactctaaaa 4553561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 5e-40; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 338 - 446
Target Start/End: Original strand, 17095571 - 17095679
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  17095571 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaaatgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 17095670  T
Q  438 accctaaaa 446  Q
    |||||||||    
T  17095671 accctaaaa 17095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 338 - 457
Target Start/End: Original strand, 19723332 - 19723451
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | ||| ||||||||| |||||||||||||    
T  19723332 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccaaagatcttccctgccttggactggggcaccatcccctc 19723431  T
Q  438 accctaaaattaatgtaacc 457  Q
    |||||||||||  |||||||    
T  19723432 accctaaaatttttgtaacc 19723451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 343 - 457
Target Start/End: Original strand, 11404027 - 11404141
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||    
T  11404027 ctagtgtctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccct 11404126  T
Q  443 aaaattaatgtaacc 457  Q
    ||||||  |||||||    
T  11404127 aaaatttttgtaacc 11404141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 32296745 - 32296640
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| ||| ||||||||||||||||||    
T  32296745 ctagtgcctttgaagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggattggggcaccatcccctcaccct 32296646  T
Q  443 aaaatt 448  Q
    ||||||    
T  32296645 aaaatt 32296640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 347 - 448
Target Start/End: Original strand, 22711539 - 22711640
Alignment:
Q  347 tgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaa 446  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||||||| |||||||||||||| |||||||    
T  22711539 tgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccttgccttggactggggcaccatcccctcatcctaaaa 22711638  T
Q  447 tt 448  Q
    ||    
T  22711639 tt 22711640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 338 - 446
Target Start/End: Complemental strand, 28739672 - 28739564
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| | | | |||||||| ||||||||||||||    
T  28739672 ccccactagtgcctttggaggaaagtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactgcagcaccatcccctc 28739573  T
Q  438 accctaaaa 446  Q
    |||||||||    
T  28739572 accctaaaa 28739564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 338 - 457
Target Start/End: Original strand, 29767209 - 29767326
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||| | ||| ||||||||| |||||||||||||    
T  29767209 ccccgctagtgcctttgaagggaggtaaat--aattacctttgtaagtgttctttgagcccgaaggtcttccctgccttggactggggcaccatcccctc 29767306  T
Q  438 accctaaaattaatgtaacc 457  Q
    |||||||||||  |||||||    
T  29767307 accctaaaatttttgtaacc 29767326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 4840161 - 4840271
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |||||||| | ||| ||||||| | |||||||||||||    
T  4840161 ccccgctagtgcctttggagggaggtaaatgtcattaccattgtaagtgctctttgagtccaaaggtcttccctgccttggactagggcaccatcccctc 4840260  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  4840261 accctaaaatt 4840271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 350 - 448
Target Start/End: Original strand, 36261679 - 36261777
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| ||| ||||| |||||||||||||||| |||||||    
T  36261679 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaagatcttccctgccttgaactggggcaccatcccctcaccttaaaatt 36261777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 350 - 445
Target Start/End: Original strand, 43288105 - 43288200
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaa 445  Q
    |||||||||||||||||||||||||||||||||| || | |||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||    
T  43288105 ctttggagggaggtaaatgtaattacctttgtaattgatttttgagtccgaaggtcttccctgccttggactggagcaccatcccctcaccctaaa 43288200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 346 - 429
Target Start/End: Complemental strand, 21355087 - 21355004
Alignment:
Q  346 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcacc 429  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||||| |||||    
T  21355087 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgaacccgaaggtcttccctgccttggactggggcacc 21355004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 350 - 457
Target Start/End: Original strand, 41553318 - 41553425
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatta 449  Q
    ||||||||| | |||||||||| |||||||||||||| ||||||||| |||||||||| | ||| || |||||||||||||||||||||||||||||||     
T  41553318 ctttggaggaacgtaaatgtaaatacctttgtaagtgttctttgagctcgaaggtcttccctgccttagactggagcaccatcccctcaccctaaaattt 41553417  T
Q  450 atgtaacc 457  Q
     |||||||    
T  41553418 ttgtaacc 41553425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 343 - 409
Target Start/End: Complemental strand, 24475102 - 24475036
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttc 409  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  24475102 ctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgttctttgagcccgaaggtctttc 24475036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 363 - 446
Target Start/End: Complemental strand, 11909509 - 11909426
Alignment:
Q  363 taaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaa 446  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||| | ||| ||||||||| ||||||||||||||||||||||    
T  11909509 taaatgtaaatacctttctaagtgctctttgagctcgaaggtcttccctgccttggactggggcaccatcccctcaccctaaaa 11909426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 346 - 448
Target Start/End: Original strand, 30682868 - 30682969
Alignment:
Q  346 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaa 445  Q
    |||||||||||| ||| ||||||||| ||| |||||||||| ||||||||||||||| |||| | ||| ||||||||| |||||||||||||||| ||||    
T  30682868 gtgcctttggagagagataaatgtaaatacttttgtaagtgttctttgagcccgaagatcttccctgccttggactgg-gcaccatcccctcaccttaaa 30682966  T
Q  446 att 448  Q
    |||    
T  30682967 att 30682969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 11610306 - 11610411
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||||||||||||  |||||||| ||| || ||||||||||||| ||| |||||||||||||| | |   ||||||||| ||||||||||||||||||    
T  11610306 ctagtgcctttggagaaaggtaaatataaatatctttgtaagtgctgtttaagcccgaaggtcttacttatcttggactggggcaccatcccctcaccct 11610405  T
Q  443 aaaatt 448  Q
    ||||||    
T  11610406 aaaatt 11610411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 27881099 - 27881044
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttg 393  Q
    |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  27881099 ccccgctagtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttg 27881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 338 - 393
Target Start/End: Complemental strand, 28021280 - 28021225
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttg 393  Q
    |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  28021280 ccccgctagtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttg 28021225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 448
Target Start/End: Complemental strand, 27879620 - 27879561
Alignment:
Q  389 ctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    ||||||||| |||| |||| | | | ||||||||| ||||||||||||||||||||||||    
T  27879620 ctttgagcctgaagatcttccctaccttggactggggcaccatcccctcaccctaaaatt 27879561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 448
Target Start/End: Complemental strand, 28019801 - 28019742
Alignment:
Q  389 ctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    ||||||||| |||| |||| | | | ||||||||| ||||||||||||||||||||||||    
T  28019801 ctttgagcctgaagatcttccctaccttggactggggcaccatcccctcaccctaaaatt 28019742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 43269896 - 43269837
Alignment:
Q  118 ctcaataacattttaacgaatacaaattttataaaatccaccgttggattgaaagtttat 177  Q
    ||||||||  |||||||||||||||||||| ||||||| ||  || ||||||||||||||    
T  43269896 ctcaataatgttttaacgaatacaaattttgtaaaatctactattagattgaaagtttat 43269837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 2e-39; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 343 - 446
Target Start/End: Original strand, 51066519 - 51066622
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||    
T  51066519 ctagtgcctttggagggaggtaaatataattacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactggggcaccatcccctcaccct 51066618  T
Q  443 aaaa 446  Q
    ||||    
T  51066619 aaaa 51066622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 338 - 446
Target Start/End: Complemental strand, 46494509 - 46494401
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | | | ||||||||| |||||||||||||    
T  46494509 ccccactagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactggggcaccatcccctc 46494410  T
Q  438 accctaaaa 446  Q
    |||||||||    
T  46494409 accctaaaa 46494401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 36192562 - 36192672
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| | | | ||||||||| |||||||||||||    
T  36192562 ccccactagtgcctttggagggaggtaaatgtaattacttttgtaaatgctctttgagcccgaaggtcttccctaccttggactggggcaccatcccctc 36192661  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  36192662 accctaaaatt 36192672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 51714076 - 51713966
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||| |||||||||||||    
T  51714076 ccccactagtgcctttgaagggaggtaaatataaatacctttgtaagtgctctttgagcccgaaggtcttccctgctttgaactggggcaccatcccctc 51713977  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  51713976 accctaaaatt 51713966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 7173691 - 7173586
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||    
T  7173691 ctagtgcctttggaaggaggtaaatgtcaatacctttgtaagtgctctttgagcccgaaggtcttccctgcgttggactggggcaccatcccctcaccct 7173592  T
Q  443 aaaatt 448  Q
    ||||||    
T  7173591 aaaatt 7173586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 346 - 448
Target Start/End: Original strand, 29576444 - 29576546
Alignment:
Q  346 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaa 445  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| | ||| ||||| ||| |||||| ||||||||||||||    
T  29576444 gtgcctttggagggaggtaaatgtaaataactttgtaagtgctctttgagcccgaaggtcttccctgccttggattggggcaccaccccctcaccctaaa 29576543  T
Q  446 att 448  Q
    |||    
T  29576544 att 29576546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 343 - 448
Target Start/End: Complemental strand, 30970490 - 30970385
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||| | | | || |||||| ||||||||||||||||||    
T  30970490 ctagtgcctttgaagggaggtaaatgtaaatacctttgtaagtgctctttgagctcgaaggtcttccctaccttagactggggcaccatcccctcaccct 30970391  T
Q  443 aaaatt 448  Q
    ||||||    
T  30970390 aaaatt 30970385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 345 - 457
Target Start/End: Original strand, 55231715 - 55231827
Alignment:
Q  345 agtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaa 444  Q
    |||||||||| |||||||||||||||| ||| ||||||||||||||||||||| ||| ||||| | ||| ||||||||| ||||||||||||||||||||    
T  55231715 agtgcctttgaagggaggtaaatgtaaatacttttgtaagtgctctttgagcctgaatgtcttccctgccttggactggggcaccatcccctcaccctaa 55231814  T
Q  445 aattaatgtaacc 457  Q
    ||||  |||||||    
T  55231815 aatttttgtaacc 55231827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 338 - 445
Target Start/End: Original strand, 32139185 - 32139292
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||   ||| ||||||||| |||||||||| ||    
T  32139185 ccccgctagtgtctttggagggaggtaaatgtaattacctttgtaagtgttctttgagcctgaaggtcttctctgccttggactggggcaccatcccttc 32139284  T
Q  438 accctaaa 445  Q
    ||||||||    
T  32139285 accctaaa 32139292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 50905769 - 50905879
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||||| ||||| ||| ||||| |||||||||  ||    
T  50905769 ccccgctagtgcctttggagagaggtaaatgtaattatctttgtaggtgctctttgagtccgaaggtcttccatgccttgaactggggcaccatcctttc 50905868  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  50905869 accctaaaatt 50905879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 338 - 419
Target Start/End: Original strand, 8740469 - 8740550
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttgga 419  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  8740469 ccccgctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttgagcccgaaggtcttccatgccttgga 8740550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 39863889 - 39863779
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||   | | ||||||||   ||| ||||||||    
T  39863889 ccccgctagtgcctttggagggaagtaaatgtaattacctttgtaagtgctctttgaacccgaaggtcttctctaccttggactgagacactatcccctc 39863790  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  39863789 accctaaaatt 39863779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 355 - 448
Target Start/End: Original strand, 676766 - 676859
Alignment:
Q  355 gagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | ||| |||||||| | ||||||||||| ||| |||||||    
T  676766 gagggaggtaagtgtaaatacctttgtaagtgctctttgagcccgaaggtcttccctgccttggactgtaacaccatccccttaccttaaaatt 676859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 338 - 448
Target Start/End: Complemental strand, 47627104 - 47626994
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||||| |||||||||||||||| ||||| | ||| | |||||||| | |||||||||| | ||| |||||||||| ||||||| ||||    
T  47627104 ccccactagtgcctttgaagggaggtaaatgtaaatacctctataaatactctttgaactcgaaggtcttccctgccttggactggaacaccatctcctc 47627005  T
Q  438 accctaaaatt 448  Q
    |||||||||||    
T  47627004 accctaaaatt 47626994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 346 - 457
Target Start/End: Original strand, 2570230 - 2570341
Alignment:
Q  346 gtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaa 445  Q
    |||||||||||||||||||||| ||| || | || ||| || |||||||| |||||| |||| | ||| ||||||||| |||||||||||||||||||||    
T  2570230 gtgcctttggagggaggtaaatataaatatcattataaatgttctttgagtccgaagatcttccctgccttggactggggcaccatcccctcaccctaaa 2570329  T
Q  446 attaatgtaacc 457  Q
    |||  |||||||    
T  2570330 atttttgtaacc 2570341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 373 - 448
Target Start/End: Complemental strand, 22304167 - 22304092
Alignment:
Q  373 tacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    ||||||||||||||||||||||||||||||||||| | | | ||||||||| ||||||||| ||||||||||||||    
T  22304167 tacctttgtaagtgctctttgagcccgaaggtcttccctaccttggactggggcaccatcctctcaccctaaaatt 22304092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 343 - 407
Target Start/End: Original strand, 41523423 - 41523487
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctt 407  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||    
T  41523423 ctagtgtctttggagggaggtaaatgtaaatacctttataagtgctctttgagctcgaaggtctt 41523487  T

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Target: chr4; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 350 - 457
Target Start/End: Complemental strand, 4080651 - 4080544
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatta 449  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| | ||| |||||   ||  ||||| ||||||||||||||||| || |||||||     
T  4080651 ctttggagggaggtaaatgtaattacatttgtaaatgctctttgagtctgaatgtcttctctgtcttggattggagcaccatcccctcgccttaaaattt 4080552  T
Q  450 atgtaacc 457  Q
     |||||||    
T  4080551 ttgtaacc 4080544  T

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Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 344 - 420
Target Start/End: Original strand, 22423403 - 22423479
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggac 420  Q
    |||| ||||||||||||||||||||||| ||| |||||||||| |||||| |  |||||||||| | ||||||||||    
T  22423403 tagtacctttggagggaggtaaatgtaaatacttttgtaagtgttctttgtgttcgaaggtcttccctgctttggac 22423479  T

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Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 355 - 447
Target Start/End: Complemental strand, 51279127 - 51279035
Alignment:
Q  355 gagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaat 447  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||| |||||||| |   | ||||| |   |||||||||||||||||||||||    
T  51279127 gagggaggtcaatgtaaatacttttgtaagtgctctttgagcccaaaggtcttcccaaccttggattaaggcaccatcccctcaccctaaaat 51279035  T

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Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 338 - 397
Target Start/End: Complemental strand, 50399753 - 50399694
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcc 397  Q
    |||| |||||||  ||||||| |||||||||||| |||||||||||||| ||||||||||    
T  50399753 ccccgctagtgctcttggaggaaggtaaatgtaaatacctttgtaagtgttctttgagcc 50399694  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 333
Target Start/End: Complemental strand, 4635254 - 4635217
Alignment:
Q  296 atattttttaaatttgaccgttgaattaaaagtttata 333  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  4635254 atattttttaaatttgaccgttggattataagtttata 4635217  T

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Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 396 - 441
Target Start/End: Complemental strand, 28202643 - 28202598
Alignment:
Q  396 cccgaaggtctttcatgctttggactggagcaccatcccctcaccc 441  Q
    |||||||||||||| ||  || ||||||||||||||||||||||||    
T  28202643 cccgaaggtctttcctgtcttagactggagcaccatcccctcaccc 28202598  T

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Target: chr5 (Bit Score: 83; Significance: 8e-39; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 343 - 457
Target Start/End: Original strand, 17064349 - 17064463
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccct 442  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | ||| ||||||||| ||||||||||||||||||    
T  17064349 ctagtgcctttggagggaggtaaatgtaaatacctttgtaagtgctctttaagcccgaaggtcttccctgccttggactggggcaccatcccctcaccct 17064448  T
Q  443 aaaattaatgtaacc 457  Q
    ||||||  |||||||    
T  17064449 aaaatttttgtaacc 17064463  T

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Target: chr5; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 338 - 446
Target Start/End: Complemental strand, 20983114 - 20983006
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| |||||||||| |||| |||||||||| |||||| ||||||||||||||||||||||||| ||||| | ||| ||||||||| |||||||||||||    
T  20983114 ccccgctagtgccttcggagagaggtaaatgcaattacatttgtaagtgctctttgagcccgaaagtcttccctgccttggactggggcaccatcccctc 20983015  T
Q  438 accctaaaa 446  Q
    |||||||||    
T  20983014 accctaaaa 20983006  T

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Target: chr5; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 338 - 448
Target Start/End: Original strand, 37976567 - 37976681
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaat----gtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcc 433  Q
    |||| ||||||| |||| ||||||||||||    |||| |||||||||||||||| ||||||||||||||| |||| ||| ||| ||||| |||||||||    
T  37976567 ccccgctagtgcatttgaagggaggtaaattaatgtaaatacctttgtaagtgctatttgagcccgaaggtttttcctgccttgaactggggcaccatcc 37976666  T
Q  434 cctcaccctaaaatt 448  Q
    |||||||||||||||    
T  37976667 cctcaccctaaaatt 37976681  T

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Target: chr5; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 41910865 - 41910955
Alignment:
Q  358 ggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaaaatt 448  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| |||||   ||| ||| ||||| |||||||||||||||| |||||||    
T  41910865 ggaggtaaatgtaattaactttgtaagtgttctttgagcccgaatgtcttctctgccttgaactggggcaccatcccctcaccttaaaatt 41910955  T

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Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 350 - 444
Target Start/End: Original strand, 31673863 - 31673956
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcaccctaa 444  Q
    |||||||| |||| |||||||| | |||||| |||||| |||||||||| |||||| | | ||| ||||||||| |||||| |||||||||||||    
T  31673863 ctttggagagaggaaaatgtaaatccctttg-aagtgccctttgagccctaaggtcctccctgccttggactggggcaccaacccctcaccctaa 31673956  T

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Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 448
Target Start/End: Complemental strand, 5009521 - 5009418
Alignment:
Q  344 tagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctcacccta 443  Q
    ||||| |||||||| ||| ||||||||| ||  ||||||| || |||||||  ||||||||||| ||||| ||| ||||| ||| ||||||| |||||||    
T  5009521 tagtgtctttggagagagataaatgtaaatatttttgtaaatgttctttgaatccgaaggtcttccatgccttgaactggtgcatcatcccc-cacccta 5009423  T
Q  444 aaatt 448  Q
    |||||    
T  5009422 aaatt 5009418  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 350 - 409
Target Start/End: Complemental strand, 18303409 - 18303350
Alignment:
Q  350 ctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttc 409  Q
    ||||||||| | ||||| |||| ||| |||||||||||||||| | ||||||||||||||    
T  18303409 ctttggaggaaagtaaacgtaaatacttttgtaagtgctctttaaacccgaaggtctttc 18303350  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 32326560 - 32326617
Alignment:
Q  335 catcccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctcttt 392  Q
    |||||||||||||||| ||||||||| |||||  ||| | ||||||||| ||||||||    
T  32326560 catcccctctagtgccattggagggaagtaaaaataaattcctttgtaactgctcttt 32326617  T

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Target: scaffold0021 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 107802 - 107700
Alignment:
Q  338 cccctctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctttcatgctttggactggagcaccatcccctc 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| ||||||||| |||||||||||||    
T  107802 ccccgctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctaccctgccttggactggggcaccatcccctc 107703  T
Q  438 acc 440  Q
    |||    
T  107702 acc 107700  T

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Target: scaffold0691 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 7075 - 7011
Alignment:
Q  343 ctagtgcctttggagggaggtaaatgtaattacctttgtaagtgctctttgagcccgaaggtctt 407  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||| |||||||| |||||||||||    
T  7075 ctagtgcgtttggagggaagtaaatgtaattacctttgcaagtgttctttgagtccgaaggtctt 7011  T

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