View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9042_low_3 (Length: 1196)

Name: NF9042_low_3
Description: NF9042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9042_low_3
NF9042_low_3
[»] chr7 (26 HSPs)
chr7 (19-1176)||(36463866-36465019)
chr7 (419-830)||(8414489-8414886)
chr7 (419-830)||(3934742-3935139)
chr7 (423-829)||(3932507-3932899)
chr7 (500-829)||(19788938-19789272)
chr7 (500-827)||(19786632-19786964)
chr7 (459-829)||(8733495-8733850)
chr7 (424-829)||(3051993-3052387)
chr7 (631-831)||(8731174-8731359)
chr7 (459-707)||(42678669-42678934)
chr7 (743-829)||(18395411-18395497)
chr7 (743-829)||(42678571-42678657)
chr7 (743-829)||(16496953-16497039)
chr7 (743-829)||(16535135-16535221)
chr7 (743-829)||(16630441-16630527)
chr7 (631-741)||(28610315-28610424)
chr7 (419-545)||(16497078-16497204)
chr7 (422-545)||(16535260-16535383)
chr7 (422-545)||(16630279-16630402)
chr7 (743-832)||(21769066-21769155)
chr7 (419-487)||(16535288-16535356)
chr7 (419-487)||(16630306-16630374)
chr7 (653-705)||(18395336-18395388)
chr7 (583-827)||(19093846-19094092)
chr7 (775-829)||(42680808-42680862)
chr7 (419-487)||(3932533-3932601)
[»] chr8 (8 HSPs)
chr8 (419-829)||(21268120-21268525)
chr8 (419-829)||(36379465-36379863)
chr8 (419-830)||(36377180-36377578)
chr8 (459-829)||(4876820-4877176)
chr8 (459-829)||(4879148-4879504)
chr8 (459-831)||(24519151-24519510)
chr8 (423-527)||(21268447-21268551)
chr8 (419-482)||(4879138-4879201)
[»] chr1 (13 HSPs)
chr1 (419-829)||(29833076-29833471)
chr1 (419-829)||(734579-734974)
chr1 (419-829)||(2403835-2404223)
chr1 (459-829)||(8933549-8933913)
chr1 (631-829)||(10909108-10909292)
chr1 (631-830)||(10911352-10911536)
chr1 (631-829)||(13011698-13011881)
chr1 (611-708)||(29833852-29833949)
chr1 (743-829)||(29833960-29834046)
chr1 (423-553)||(2416660-2416791)
chr1 (628-829)||(2409957-2410136)
chr1 (554-713)||(18353733-18353894)
chr1 (470-541)||(419213-419284)
[»] chr4 (14 HSPs)
chr4 (423-829)||(45161971-45162364)
chr4 (419-827)||(45166859-45167254)
chr4 (459-830)||(42468438-42468795)
chr4 (459-829)||(42470768-42471124)
chr4 (491-708)||(50855868-50856085)
chr4 (558-829)||(19429076-19429334)
chr4 (631-829)||(13774151-13774336)
chr4 (503-705)||(8739264-8739467)
chr4 (631-826)||(13776449-13776630)
chr4 (743-829)||(50855771-50855857)
chr4 (567-693)||(43179575-43179710)
chr4 (572-706)||(24908156-24908298)
chr4 (419-482)||(42468742-42468805)
chr4 (768-829)||(8739501-8739562)
[»] chr2 (16 HSPs)
chr2 (419-829)||(31486671-31487069)
chr2 (419-831)||(31488955-31489355)
chr2 (431-718)||(29801774-29802067)
chr2 (631-829)||(42275556-42275739)
chr2 (631-829)||(42277782-42277965)
chr2 (421-830)||(23859767-23860188)
chr2 (459-711)||(34576694-34576969)
chr2 (743-829)||(5164151-5164237)
chr2 (743-823)||(8995076-8995156)
chr2 (743-823)||(15730013-15730093)
chr2 (767-829)||(39816089-39816151)
chr2 (768-821)||(34576612-34576665)
chr2 (419-530)||(15729871-15729981)
chr2 (666-707)||(8995169-8995210)
chr2 (419-495)||(34576903-34576979)
chr2 (428-495)||(29801802-29801869)
[»] chr5 (19 HSPs)
chr5 (419-829)||(11852175-11852561)
chr5 (419-707)||(37207660-37207948)
chr5 (419-708)||(23164347-23164636)
chr5 (419-708)||(22600700-22600989)
chr5 (419-708)||(11850014-11850303)
chr5 (564-707)||(37215396-37215539)
chr5 (459-707)||(1779316-1779581)
chr5 (743-830)||(11849916-11850003)
chr5 (743-829)||(23164254-23164340)
chr5 (743-830)||(22601000-22601088)
chr5 (743-829)||(37215551-37215638)
chr5 (743-829)||(1779222-1779303)
chr5 (419-670)||(1779587-1779855)
chr5 (751-829)||(21743719-21743797)
chr5 (758-829)||(37207998-37208070)
chr5 (631-718)||(21743622-21743709)
chr5 (768-829)||(15469197-15469258)
chr5 (665-705)||(1779181-1779221)
chr5 (459-526)||(37207640-37207707)
[»] scaffold0599 (1 HSPs)
scaffold0599 (594-829)||(1579-1801)
[»] chr3 (6 HSPs)
chr3 (631-829)||(4530835-4531020)
chr3 (637-830)||(4533138-4533318)
chr3 (423-705)||(18966221-18966518)
chr3 (556-631)||(1701104-1701179)
chr3 (574-630)||(8535522-8535578)
chr3 (423-495)||(39578235-39578307)
[»] scaffold0050 (6 HSPs)
scaffold0050 (552-718)||(29261-29426)
scaffold0050 (552-718)||(31574-31741)
scaffold0050 (768-829)||(29453-29514)
scaffold0050 (768-829)||(31768-31829)
scaffold0050 (418-506)||(31439-31527)
scaffold0050 (419-506)||(29122-29209)
[»] scaffold0008 (2 HSPs)
scaffold0008 (743-829)||(88445-88531)
scaffold0008 (423-507)||(73069-73153)
[»] scaffold1361 (1 HSPs)
scaffold1361 (743-829)||(53-140)
[»] scaffold0098 (1 HSPs)
scaffold0098 (751-829)||(3707-3785)
[»] chr6 (2 HSPs)
chr6 (491-697)||(21199149-21199374)
chr6 (768-827)||(20642300-20642359)
[»] scaffold0312 (1 HSPs)
scaffold0312 (470-541)||(11287-11358)
[»] scaffold0045 (2 HSPs)
scaffold0045 (768-832)||(64082-64144)
scaffold0045 (768-832)||(71414-71476)


Alignment Details
Target: chr7 (Bit Score: 1080; Significance: 0; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 1080; E-Value: 0
Query Start/End: Original strand, 19 - 1176
Target Start/End: Complemental strand, 36465019 - 36463866
Alignment:
Q  19 atcattacttacaatgtctacatagataagggttatagcgatttcaacatagataaggaagttcactaacacaagagaattagaagttaccttcccttcc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36465019 atcattacttacaatgtctacatagataagggttatagcgatttcaacatagataaggaagttcactaacacaagagaattagaagttaccttcccttcc 36464920  T
Q  119 caccatataagcttttgttggaaaaattaatcattcattcacacaatcaaatacccaatgaaaatgaccatattctcttgagaggaacctatctacttgt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464919 caccatataagcttttgttggaaaaattaatcattcattcacacaatcaaatacccaatgaaaatgaccatattctcttgagaggaacctatctacttgt 36464820  T
Q  219 gcttccttatcaacaatcttaaaatcaacagaattagctaagcgaacctaaaaggaagtttaaaaacgttgtcgcctatatcaaaaacctgatgagtacg 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464819 gcttccttatcaacaatcttaaaatcaacagaattagctaagcgaacctaaaaggaagtttaaaaacgttgtcgcctatatcaaaaacctgatgagtacg 36464720  T
Q  319 taatgctcaggtctggttctccaaaatgaatgagacccctctcccttccatgaaactataccgtcaaaagcaggaataataaaagcaacgatgatgaaga 418  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464719 taatgctcaggtctggtgctccaaaatgaatgagacccctctcccttccatgaaactataccgtcaaaagcaggaataataaaagcaacgatgatgaaga 36464620  T
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36464619 agaatgatgaaaaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaataataatatagaagtctctagaatactag 36464520  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464519 ggaataataaggaagctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 36464420  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464419 cagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 36464320  T
Q  719 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 818  Q
    ||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464319 atactcaagcatagtcaagc----attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 36464224  T
Q  819 tccctgagccaaatgattcctcgaaaaatgctttgtgctacattaggatgatacttgnnnnnnnggaatccaaaccagacacacagaacgtgtatacgat 918  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  36464223 tccctgagccaaacgattcctcgaaaaatgctttgtgctacattaggatgatacttgtttttttggaatccaaaccagacacacagaacgtgtatacgat 36464124  T
Q  919 gttttatgacttggattcgcatgatttacttccatacttccatagcttaataatgaattttattttggtaagtgactacgattccattggagtttttgat 1018  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  36464123 gttttatgacttggattcgcatgatttacttccatacttccatagcttaataatgaattttattttggaaggtgactacgattccattggagtttttgat 36464024  T
Q  1019 tggttatcttgtgaacataaacacaacctcaaacataaggatcataggtttctttccctgtctctaaactcctttaacatagacatgatgacttcataaa 1118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36464023 tggttatcttgtgaacataaacacaacctcaaacataaggatcataggtttctttccctgtctctaaactcctttaacatagacatgatgacttcataaa 36463924  T
Q  1119 caagttgttccaagcttggaatcatgttaatagtgacttcaagttctcccacaatttt 1176  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36463923 caagtttttccaagcttggaatcatgttaatagtgacttcaagttctcccacaatttt 36463866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 287; E-Value: 1e-160
Query Start/End: Original strand, 419 - 830
Target Start/End: Complemental strand, 8414886 - 8414489
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||    
T  8414886 agaatgatgaagaataatatggaagactctagaatactagagaataatgtggaagtatctagaacactaaagaataatatagaagtctctagaatactag 8414787  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||||||    
T  8414786 ggaataataaggaaactactagacactactaaataagcactagggaagtcttgacttttctagat-cttctagttttatatactaaaatatccatatctc 8414688  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  8414687 tagacttttctttgtttctagatttttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggc--------- 8414597  T
Q  719 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 818  Q
    ||||||||||||| ||||||    |||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  8414596 atactcaagcatattcaagc----attgaatcattcaaataatataacttttctttgagaatattagagtgtttttctattttctctacctttccttttg 8414501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 419 - 830
Target Start/End: Original strand, 3934742 - 3935139
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||||| |||||||||     |||||||| ||||||||||||||| |||||| ||||| || |||| ||||||||||||||    
T  3934742 agaatgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatactag 3934841  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  3934842 ggaataataaggaagctactagatactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 3934941  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||          |    
T  3934942 tagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagaatagtataaataaggctcaccatctagtgttttg----------g 3935031  T
Q  719 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 818  Q
    ||||||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3935032 atactcaagcataatcaagc----attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttg 3935127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 423 - 829
Target Start/End: Original strand, 3932507 - 3932899
Alignment:
Q  423 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaa 522  Q
    ||||||| ||||||||||||| |||||||||     |||||||| ||||||||||||||| |||||| ||||| || |||| ||||||||||||||||||    
T  3932507 tgatgaagaataatatggaagtctctagaatgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatactagggaa 3932606  T
Q  523 taataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctaga 622  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  3932607 taataaggaagctactagatactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctaga 3932706  T
Q  623 cttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatac 722  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||          |||||    
T  3932707 cttttctttgtttctagatatttctagtttgtaatggagagccttcctagaatagtataaataaggctcaccatctagtgttttg----------gatac 3932796  T
Q  723 tcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccc 822  Q
    ||||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3932797 tcaagcataatcaagc----attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccc 3932892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 500 - 829
Target Start/End: Original strand, 19788938 - 19789272
Alignment:
Q  500 gaagtctctagaatactagggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgt 599  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||    
T  19788938 gaagtctctagaatactagggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgt 19789037  T
Q  600 actagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccaccta 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19789038 actagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttactagagtagtataaataaggctcaccaccta 19789137  T
Q  700 gtgttttggcatactcaagatactcaagcatagtcaag-----cattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttc 793  Q
    ||||||||||||| |||||| | ||||| ||| |||||     ||   ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  19789138 gtgttttggcatattcaagacattcaag-atactcaagataatcaagcattgaatgattcaagtaatataacttttcctttgagaatattagagtgtttc 19789236  T
Q  794 tcaattttctctacctttccttttgtccctgagcca 829  Q
    || |||||||||||||||||||||||||||||||||    
T  19789237 tctattttctctacctttccttttgtccctgagcca 19789272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 500 - 827
Target Start/End: Original strand, 19786632 - 19786964
Alignment:
Q  500 gaagtctctagaatactagggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgt 599  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||    
T  19786632 gaagtctctagaatattagggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgt 19786731  T
Q  600 actagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccaccta 699  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19786732 actagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccaccta 19786831  T
Q  700 gtgttttggcatactcaagatactcaagcatagtcaag-----cattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttc 793  Q
    ||||||||||||| |||||| | ||||| ||| |||||     ||   ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  19786832 gtgttttggcatattcaagacattcaag-atactcaagataatcaagcattgaatgattcaagtaatataacttttcctttgagaatattagagtgtttc 19786930  T
Q  794 tcaattttctctacctttccttttgtccctgagc 827  Q
    || |||||||||||||||||||||||||||||||    
T  19786931 tctattttctctacctttccttttgtccctgagc 19786964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 459 - 829
Target Start/End: Complemental strand, 8733850 - 8733495
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 558  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8733850 agaataatatggaagtctctagaacactaaagaataatatagaagtctctagaatactagggaataataaggaagctactagacactactaaataagcac 8733751  T
Q  559 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 658  Q
    |||||   |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  8733750 taggg---tcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaaag 8733654  T
Q  659 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 758  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||  ||||||    |||||| ||||||| |    
T  8733653 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaaga---------atcatcaagc----attgaagcattcaaat 8733567  T
Q  759 aatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||  |||||||||||||||||    
T  8733566 aatataatcttttctttgagaatattagagagtttctctattttctctaccttctcttttgtccctgagcca 8733495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 424 - 829
Target Start/End: Original strand, 3051993 - 3052387
Alignment:
Q  424 gatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag----g 519  Q
    |||||| ||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||||||||         
T  3051993 gatgaagaataatatggaagactctagaatactagagaataatgtcgaagtctctataacactaaagaataatatagaagtctctagaatactagataat 3052092  T
Q  520 gaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctct 619  Q
     ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  3052093 aaataataaggaagctactagacactactaaataagcattagggaagtcttaacttttctagatccttctagttttatgtactagaatatccatatctct 3052192  T
Q  620 agacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaaga 719  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         | |    
T  3052193 agacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg---------ata 3052283  T
Q  720 tactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgt 819  Q
    |||||||| ||| ||||||    |||||| ||||||| ||||||||  |||||||||||||| ||||  ||||||  |||||||||||| ||||||||||    
T  3052284 tactcaagtatactcaagc----attgaagcattcaaataatataaactttctttgagaataataga--gtttctttattttctctaccattccttttgt 3052377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 631 - 831
Target Start/End: Complemental strand, 8731359 - 8731174
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||| | | ||           |     
T  8731359 tgtttctagatatttctaatttgtaatgtagagccttcctagagtagtataaataaggctcaccactaagtgtttaggcacatttaa-----------ag 8731271  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 830  Q
    | |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  8731270 aatcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttatctacctttccttttgtccctgagccaa 8731175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 459 - 707
Target Start/End: Complemental strand, 42678934 - 42678669
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagaca--ctactaaat---- 552  Q
    |||||||| ||||||| ||||||| |||||| ||||| || |||||||||| ||||||| ||||||||||||| |||||||||||  |||||||||        
T  42678934 agaataatatggaagtttctagaaaactaaagaataatatggaagtctctaaaatactatggaataataaggaagctactagacactctactaaataaaa 42678835  T
Q  553 --aagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt---------tgtttctagat 641  Q
      |||||||||| || |||| |  ||||||||||||||||||  ||||  ||||||||||||| | ||||| | ||||||         |||||||||||    
T  42678834 taaagcactaggaaaatcttaatgtttctagatccttctagtcatatgacctagagtatccatgtttctaggcctttctttgtaatcaatgtttctagat 42678735  T
Q  642 atttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 707  Q
    | ||||||||| ||||| ||| |||||| |  |||||||||||||||||||||||| |||||||||    
T  42678734 aattctagtttgtaatgtagaaccttcccaaggtagtataaataaggctcaccaccaagtgttttg 42678669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 743 - 829
Target Start/End: Original strand, 18395411 - 18395497
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18395411 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctaagcca 18395497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 743 - 829
Target Start/End: Complemental strand, 42678657 - 42678571
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  42678657 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctttattttctctacctttccttttgtccctgagcca 42678571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 743 - 829
Target Start/End: Complemental strand, 16497039 - 16496953
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  16497039 attgaatcatttaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccctgagcca 16496953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 743 - 829
Target Start/End: Complemental strand, 16535221 - 16535135
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  16535221 attgaatcatttaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccccgagcca 16535135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 743 - 829
Target Start/End: Original strand, 16630441 - 16630527
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||    
T  16630441 attgaatcatttaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccccgagcca 16630527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 4e-29
Query Start/End: Original strand, 631 - 741
Target Start/End: Complemental strand, 28610424 - 28610315
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||| |||| | || ||||||| ||||||    
T  28610424 tgtttctagatatttctagtttgtaatgtagagcctttctagagtagtataaataaggctcaccaccaagtgtttaggcacattc-agatactgaagcat 28610326  T
Q  731 agtcaagcatt 741  Q
    | |||||||||    
T  28610325 actcaagcatt 28610315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 419 - 545
Target Start/End: Complemental strand, 16497204 - 16497078
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaat-agcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatacta 517  Q
    |||||||| || ||||||||||||| ||||||||| | || |||||||| |||| | |||||||| | |||| |||||  | ||||| ||||||||||||    
T  16497204 agaatgatcaagaataatatggaagtctctagaatgatca-agaataatatggatgcctctagaataataaagaataatgtggaagtttctagaatacta 16497106  T
Q  518 gggaataataaggatgctactagacact 545  Q
     ||||||||||||| |||||||||||||    
T  16497105 tggaataataaggaagctactagacact 16497078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 422 - 545
Target Start/End: Complemental strand, 16535383 - 16535260
Alignment:
Q  422 atgatgaaaaataatatggaagactctagaat-agcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactaggg 520  Q
    ||||| || ||||||||||||| || |||||| | || |||||||| |||||| |||||||| | |||| |||||  | |||||||||||||||||| ||    
T  16535383 atgatcaagaataatatggaagtctatagaatgatca-agaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatactatgg 16535285  T
Q  521 aataataaggatgctactagacact 545  Q
    |||||||| || |||||||||||||    
T  16535284 aataataaagaagctactagacact 16535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 422 - 545
Target Start/End: Original strand, 16630279 - 16630402
Alignment:
Q  422 atgatgaaaaataatatggaagactctagaat-agcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactaggg 520  Q
    ||||| || ||||||||||||| || |||||| | || |||||||| |||||| |||||||| | |||| |||||  | |||||||||||||||||| ||    
T  16630279 atgatcaagaataatatggaagtctatagaatgatca-agaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatactatgg 16630377  T
Q  521 aataataaggatgctactagacact 545  Q
    |||||||| || |||||||||||||    
T  16630378 aataataaagaagctactagacact 16630402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 743 - 832
Target Start/End: Complemental strand, 21769155 - 21769066
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 832  Q
    |||||| ||||||| |||||  |  ||||||||||||||||| || ||||||| ||||||||||||||||||||  ||||||||| ||||    
T  21769155 attgaaacattcaaataataacaactttctttgagaatattaaagagtttctctattttctctacctttcctttcatccctgagcaaaat 21769066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 419 - 487
Target Start/End: Complemental strand, 16535356 - 16535288
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacacta 487  Q
    |||||||| || ||||||||||||| ||||||||||  | |||||||||||||||||||||||| ||||    
T  16535356 agaatgatcaagaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatacta 16535288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 419 - 487
Target Start/End: Original strand, 16630306 - 16630374
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacacta 487  Q
    |||||||| || ||||||||||||| ||||||||||  | |||||||||||||||||||||||| ||||    
T  16630306 agaatgatcaagaataatatggaagcctctagaataataaagaataatgtggaagtctctagaatacta 16630374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 653 - 705
Target Start/End: Original strand, 18395336 - 18395388
Alignment:
Q  653 ataatggagagccttcctagagtagtataaataaggctcaccacctagtgttt 705  Q
    |||||| |||||||||||||||||||||||||||||||||||||  |||||||    
T  18395336 ataatgtagagccttcctagagtagtataaataaggctcaccactaagtgttt 18395388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 583 - 827
Target Start/End: Complemental strand, 19094092 - 19093846
Alignment:
Q  583 tccttctagttttatgtactagagtatccatatctctagacttttctttgt---------ttctagatatttctagtttataatggagagc----cttcc 669  Q
    |||||||||  ||||  |||||||||||||| |||||||||||||||||||         || |||||||||||||||| ||||| ||||     ||| |    
T  19094092 tccttctagacttataaactagagtatccatgtctctagacttttctttgtaatcgatatttttagatatttctagtttgtaatgtagagtacgtctttc 19093993  T
Q  670 tagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttt 769  Q
    ||||||||||||||||||| || ||||| ||||||  |||||||||||| || ||||  ||  |||| |||| |   ||| ||  ||   ||||||  ||    
T  19093992 tagagtagtataaataaggttcgccaccaagtgttcaggcatactcaag-tattcaaaaat--tcaaacattca---aataatataa---atataaactt 19093902  T
Q  770 tctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagc 827  Q
    |||||||||||||||||| ||||||  ||||||||||||| |||||||| ||||||||    
T  19093901 tctttgagaatattagagagtttct--attttctctacctctccttttgaccctgagc 19093846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 775 - 829
Target Start/End: Original strand, 42680808 - 42680862
Alignment:
Q  775 gagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||| |||||||||||||||| |||||| ||| |||||    
T  42680808 gagaatattagagtgtttctctattttctctacctttcattttgttcctcagcca 42680862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 419 - 487
Target Start/End: Original strand, 3932533 - 3932601
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacacta 487  Q
    ||||||||||| ||||||||||||| |||||||| |  | |||||||| |||||| |||||||| ||||    
T  3932533 agaatgatgaagaataatatggaagtctctagaagactaaagaataatatggaagactctagaatacta 3932601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 295; Significance: 1e-165; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 419 - 829
Target Start/End: Complemental strand, 21268525 - 21268120
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  21268525 agaatggtgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaataatatagaagtctctagaatactag 21268426  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21268425 ggaataataaggaagctactagacactactaaataaa-actagggaagtcttgacttttctagatccttctagttttatgtactaaagtatccatatctc 21268327  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| || |     
T  21268326 tagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcactacctagtgtttaggcataatccaa 21268227  T
Q  719 atactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttcctttt 817  Q
    ||||||||| ||| ||||||    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  21268226 atactcaag-ataatcaagc----attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctaccttttctttt 21268132  T
Q  818 gtccctgagcca 829  Q
    ||||||||||||    
T  21268131 gtccctgagcca 21268120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 274; E-Value: 1e-152
Query Start/End: Original strand, 419 - 829
Target Start/End: Complemental strand, 36379863 - 36379465
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    |||||| |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  36379863 agaatggtgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactag 36379764  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  36379763 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 36379664  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacct-agtgttttggcatactcaa 717  Q
    | |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  36379663 tggacttttctttgtttccagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctgggtgttttggcatactcaa 36379564  T
Q  718 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttccttt 816  Q
    |||| ||||||              ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  36379563 gataatcaagc--------------attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctacctttccttt 36379478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 419 - 830
Target Start/End: Complemental strand, 36377578 - 36377180
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    |||||| |||| ||||||||||||||||||||||||  |  ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  36377578 agaatggtgaagaataatatggaagactctagaatactaaggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactag 36377479  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  36377478 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 36377379  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacct-agtgttttggcatactcaa 717  Q
    |  ||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36377378 tgaacttttctttgttttcagatatttctactttgtaatggagagccttcctagagtagtataaataaggctcaccacctaagtgttttggcatactcaa 36377279  T
Q  718 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttccttt 816  Q
     ||| ||||||              ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||    
T  36377278 aataatcaagc--------------attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctacctttcc-tt 36377194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 459 - 829
Target Start/End: Original strand, 4876820 - 4877176
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 558  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  4876820 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagaaactactaaataagcac 4876919  T
Q  559 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 658  Q
    |||||||||||| ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4876920 tagggaagtcttaacttttctagatccttctaggcttatgtactatagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 4877019  T
Q  659 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 758  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||              ||||||| ||||||||    
T  4877020 gagagccttcctagagtagtataaataaggctcaccatctagtgttttgacatactcaagataatcaagc--------------attgaatgattcaagt 4877105  T
Q  759 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4877106 aatataacttttccttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4877176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 459 - 829
Target Start/End: Original strand, 4879148 - 4879504
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 558  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  4879148 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagaaactactaaataagcac 4879247  T
Q  559 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 658  Q
    |||||||||||| ||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4879248 tagggaagtcttaacttttctagatccttctaggcttatgtactatagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 4879347  T
Q  659 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 758  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||              ||||||| ||||||||    
T  4879348 gagagccttcctagagtagtataaataaggctcaccatctagtgttttgacatactcaagataatcaagc--------------attgaatgattcaagt 4879433  T
Q  759 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4879434 aatataacttttccttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 459 - 831
Target Start/End: Complemental strand, 24519510 - 24519151
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 558  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||| ||| ||||||||||||||||    
T  24519510 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctaccagatactactaaataagcac 24519411  T
Q  559 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 658  Q
    |||||||||||| ||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24519410 tagggaagtcttaacttttctagatccttctaggcttatgtacaaaagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 24519311  T
Q  659 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 758  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||         |||| ||||||| ||||||    ||||||||||||||||    
T  24519310 gagagccttcctagagtagtataaataaggctcaccatctagtgttttggca---------tactgaagcataatcaagc----attgaatcattcaagt 24519224  T
Q  759 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaa 831  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24519223 aatataacttttcttagagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaaa 24519151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 423 - 527
Target Start/End: Complemental strand, 21268551 - 21268447
Alignment:
Q  423 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaa 522  Q
    ||||||| ||||||||||||| ||||||||| |   |||||||| |||||| |||||||| |||| | |||||  | ||||||||||||| ||||  |||    
T  21268551 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaa 21268452  T
Q  523 taata 527  Q
    |||||    
T  21268451 taata 21268447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 419 - 482
Target Start/End: Original strand, 4879138 - 4879201
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaa 482  Q
    ||||||||||| ||||||||||||| ||||||||| |   |||||||| |||||| ||||||||    
T  4879138 agaatgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaa 4879201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 288; Significance: 1e-161; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 419 - 829
Target Start/End: Complemental strand, 29833471 - 29833076
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  29833471 agaatgatgaagaataatatggaagactctagaatactagagaataatgtggaagtctctagaacactaaagaataatatagaagtctctagaatactag 29833372  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||    
T  29833371 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatgtctc 29833272  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||     
T  29833271 tagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcacattcaa- 29833173  T
Q  719 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 818  Q
    ||  ||||||              ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  29833172 atcatcaagc--------------attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttg 29833087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 274; E-Value: 1e-152
Query Start/End: Original strand, 419 - 829
Target Start/End: Complemental strand, 734974 - 734579
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||    
T  734974 agaatgatgaagaataatatggaagactctagaatactagggaataatgtggaagtctttagaagactaaagaataatatagaagtctctagaatactag 734875  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  734874 ggaataacaaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggtttatgtactagagtatccatatctc 734775  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg-catactcaa 717  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  734774 tagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagaatagtataaataaggctcaccacctagtgttttggtcatactcaa 734675  T
Q  718 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttcctttt 817  Q
    |||| ||||||              ||||||| ||||||||||||||||||||| |||||||||||  |||||||||| |||||||||||||||||||||    
T  734674 gataatcaagc--------------attgaatgattcaagtaatataacttttccttgagaatatt--agtgtttctctattttctctacctttcctttt 734591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 419 - 829
Target Start/End: Complemental strand, 2404223 - 2403835
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||| || ||||||||||| |||  |||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||    
T  2404223 agaatgatgaagaataaaatagaagactctaggatactagagaataatgtggaaatctctagaagactaaagaataatatagaagtctctagaatactag 2404124  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  2404123 ggaataataaggaagctactagatactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 2404024  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||   |||      
T  2404023 tagacttttctttgtttctagatatttctagtttgtaatggagagtcttcctagagtagtataaataaggttcaccacttagtgttttggca---tca-- 2403929  T
Q  719 atactcaagcatagtcaagcattaattgaatcattcaagtaatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttcctttt 817  Q
        |||||||||              ||| ||||||| ||||||||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  2403928 ----tcaagcata--------------gaaacattcaaataatataatattttctttgagaatattagagagtttctctattttctctacctttcctttt 2403847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 459 - 829
Target Start/End: Complemental strand, 8933913 - 8933549
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacact--actaaataa-- 554  Q
    |||||||| ||||| | |||| || |||||| || || || |||||||||| ||||||| ||||||||||||| |||| ||||||||  |||||||||      
T  8933913 agaataatatggaaatttctaaaaaactaaagaaaaatatggaagtctctaaaatactatggaataataaggaagctattagacactctactaaataaaa 8933814  T
Q  555 ----gcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgt---------ttctagat 641  Q
        |||||||| || |||| |  ||||||||||||||||||  |||| |||||||||||||| | ||||| | |||||||||         ||||||||    
T  8933813 taaagcactaggaaaatcttaatgtttctagatccttctagtcatatgaactagagtatccatgtttctaggcctttctttgtaatcaatgtttctagat 8933714  T
Q  642 atttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcatt 741  Q
    | ||||||||| ||||| ||| |||||||||||||||||||||||||||||||||  |||||||||       ||||            | |||||||||    
T  8933713 aattctagtttgtaatgtagaaccttcctagagtagtataaataaggctcaccactaagtgttttg-------caag------------aatcaagcatt 8933633  T
Q  742 aattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
        ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8933632 ----gaatcattcaagtaatataacttttctttgaaaatattagagtgtttctctattttctctaccttttcttttgtccctgagcca 8933549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 631 - 829
Target Start/End: Original strand, 10909108 - 10909292
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||| | ||||           |     
T  10909108 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccactaagtgtttaggcacattcaa-----------ag 10909196  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    | |||||||||    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10909197 aatcaagcatt----gaatcattcaagtaatataacttttcgtttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 10909292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 631 - 830
Target Start/End: Original strand, 10911352 - 10911536
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||  ||||||| |||| | ||||           |     
T  10911352 tgtttctagatatttctagtttgtaatgtagacccttcctagagtagtataaataaggctcaccactaagtgtttaggcacattcaa-----------ag 10911440  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 830  Q
    | |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  10911441 aatcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttatctacctttccttttgtccctgagccaa 10911536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 631 - 829
Target Start/End: Original strand, 13011698 - 13011881
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| | || | ||||           |     
T  13011698 tgtttctagatatttttagtttttaatgtagagccttcctagagtagtataaataaggctcaccactaagtgtttagacacattcaa-----------ag 13011786  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    | |||||||||    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  13011787 aatcaagcatt----gaatcattcaaataatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgttcctgagcca 13011881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 611 - 708
Target Start/End: Original strand, 29833852 - 29833949
Alignment:
Q  611 catatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 708  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29833852 catatctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcactacctagtgttttgg 29833949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 743 - 829
Target Start/End: Original strand, 29833960 - 29834046
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29833960 attgaatccttcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 29834046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 423 - 553
Target Start/End: Complemental strand, 2416791 - 2416660
Alignment:
Q  423 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctct-agaacactaaataataaaatagaagtctctagaatactaggga 521  Q
    ||||||| ||||| || ||||||||||| ||| ||||||||||||||||||||||| |||| |||| | ||||| |||||| ||||||||||||||||||    
T  2416791 tgatgaagaataaaatagaagactctaggataccagagaataatgtggaagtctctcagaagactacagaataatatagaactctctagaatactaggga 2416692  T
Q  522 ataataaggatgctactagacactactaaata 553  Q
    |||||||||| ||||||||| |||||||||||    
T  2416691 ataataaggaagctactagatactactaaata 2416660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 628 - 829
Target Start/End: Complemental strand, 2410136 - 2409957
Alignment:
Q  628 ctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaag 727  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||      |||||    
T  2410136 ctttgtttctagatattgctaatttgtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggca---tca------tcaag 2410046  T
Q  728 catagtcaagcattaattgaatcattcaagtaatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgag 826  Q
    ||||              ||| ||||||| ||||||||  |||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  2410045 cata--------------gaaacattcaaataatataatattttctttgagaatattatagagtttctctattttctctacctttccttttgtccctgag 2409960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000008
Query Start/End: Original strand, 554 - 713
Target Start/End: Original strand, 18353733 - 18353894
Alignment:
Q  554 agcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttt--tctttgtttctagatatttctagtt 651  Q
    ||||||||| || ||||  ||||||||||||||||||||  |||| |||||||||||||| ||| |    | |  ||  ||||||||||| |||||| ||    
T  18353733 agcactaggaaaatcttatcttttctagatccttctagtcatatgaactagagtatccatgtcttttatttctaatcaatgtttctagatctttctattt 18353832  T
Q  652 tataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatac 713  Q
    | |||||  |||| || |||||||||||||| || |||||||| || |||||||||||||||    
T  18353833 tgtaatgtggagcattactagagtagtataattagggctcacctccaagtgttttggcatac 18353894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 470 - 541
Target Start/End: Complemental strand, 419284 - 419213
Alignment:
Q  470 gaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactaga 541  Q
    |||||||||||||||||||| ||||| || |||||||||| |||  ||  |||||||||||| |||||||||    
T  419284 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctactaga 419213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 270; Significance: 1e-150; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 423 - 829
Target Start/End: Original strand, 45161971 - 45162364
Alignment:
Q  423 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaa 522  Q
    ||||||| ||||||||||||| ||||||||| |   |||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||||||||||||    
T  45161971 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctagaagactaaagaataatatagaagtctttagaatactagggaa 45162070  T
Q  523 taataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctaga 622  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45162071 taataagaaagctactagacactactaaataagcactagggaagtctttacttttctagatccttctaggtttatgtactagagtatccatatctctaga 45162170  T
Q  623 cttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatac 722  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||         ||||    
T  45162171 cttttctttgtttctagatatttctagtttgtaatggagagtcttcctagaatagtataaataaggctcaccacctagtgttttggc---------atac 45162261  T
Q  723 tcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccc 822  Q
    ||||||||  |||| |    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45162262 tcaagcatcatcaaac----attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccc 45162357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 419 - 827
Target Start/End: Original strand, 45166859 - 45167254
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||||| ||||||||| |   |||||||| ||||||||||||||| |||||| ||||| |||||||||| |||||||||||    
T  45166859 agaatgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctagaagactaaagaataatatagaagtctttagaatactag 45166958  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  45166959 ggaataataaggaagctactagacactactaaataagcactagggaagtctttacttttctagatccttctaggtttatgtactagagtatccatatctc 45167058  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||             
T  45167059 tagacttttctttgtttctagatatttctagtttgtaatggagagtcttcctagaatagtataaataaggctcaccacctagtgttttggc--------- 45167149  T
Q  719 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 818  Q
    ||||||||||||  |||| |    |||||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||  || |||||||||||    
T  45167150 atactcaagcatcatcaaac----attgaatcattcaaataatataacttttttttaagaatattagagtgtttctctattttcggtaactttccttttg 45167245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 459 - 830
Target Start/End: Complemental strand, 42468795 - 42468438
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 558  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  42468795 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatactggggaataataaggaagctactagatactactaaataagcac 42468696  T
Q  559 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 658  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42468695 tagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 42468596  T
Q  659 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 758  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||          |||||| ||||||  ||||||    |||||| |||||||||    
T  42468595 gagagccttcctagagtagtataaataaggctcaccatctagtgttttg----------gatactgaagcatcatcaagc----attgaagcattcaagt 42468510  T
Q  759 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 830  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42468509 aatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 42468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 459 - 829
Target Start/End: Complemental strand, 42471124 - 42470768
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcac 558  Q
    |||||||| |||||||||||||||   | || ||||| || |||| |||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  42471124 agaataatatggaagtctctagaatggtgaagaataatatggaagactctagaatacttgggaataataaggaagctactagatactactaaataagcac 42471025  T
Q  559 tagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatg 658  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42471024 tagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatg 42470925  T
Q  659 gagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagt 758  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||          |||||| ||||||  ||||||    |||||| |||||||||    
T  42470924 gagagccttcctagagtagtataaataaggctcaccatctagtgttttg----------gatactgaagcatcatcaagc----attgaagcattcaagt 42470839  T
Q  759 aatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42470838 aatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42470768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 174; E-Value: 5e-93
Query Start/End: Original strand, 491 - 708
Target Start/End: Complemental strand, 50856085 - 50855868
Alignment:
Q  491 aataaaatagaagtctctagaatactagggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttcta 590  Q
    ||||| || |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  50856085 aataatatggaagtctctagaatactatggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttcta 50855986  T
Q  591 gttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggct 690  Q
    |  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |    
T  50855985 ggcttatgtaccagagtatccatatctctagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggtt 50855886  T
Q  691 caccacctagtgttttgg 708  Q
    ||||||||||||||||||    
T  50855885 caccacctagtgttttgg 50855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 170; E-Value: 1e-90
Query Start/End: Original strand, 558 - 829
Target Start/End: Complemental strand, 19429334 - 19429076
Alignment:
Q  558 ctagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataat 657  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  19429334 ctagggaagtcttgacttttctagatccttctagttttatgtactagagtattcatatctctagacttttctttgtttatagatatttctagtttgtaat 19429235  T
Q  658 ggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaag 757  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| |  ||| |||||||||||||||              |||||||||||||||    
T  19429234 ggagagcctacctagagtagtataaataaggctcaccaccaagtgtttagatatattcaagatactcaagc--------------attgaatcattcaag 19429149  T
Q  758 taatata-acttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  19429148 taatatatacttttctttgagaatattagagagtttctctattttctctacctttccttttgtccgtgagcca 19429076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 631 - 829
Target Start/End: Original strand, 13774151 - 13774336
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||         |||    
T  13774151 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactgaag---------cat 13774241  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
      |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13774242 catcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 13774336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 503 - 705
Target Start/End: Original strand, 8739264 - 8739467
Alignment:
Q  503 gtctctagaatactagggaataataaggatgctactagacactactaaa--taagcactagggaagtcttgacttttctagatccttctagttttatgta 600  Q
    |||||||||||||||  |||||||||||| ||||||| |||| ||||||  || ||||||||||| |||| |  ||||||||||||||||||  |||| |    
T  8739264 gtctctagaatactaatgaataataaggaagctactatacac-actaaaattatgcactagggaaatcttaatgtttctagatccttctagtcatatgaa 8739362  T
Q  601 ctagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctag 700  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||| |||||| |||||| ||    
T  8739363 ctagagcatccatatctctagatttttctttgtttctagatatttctagtttgtaatgtagagccttcctagagttgtataaacaaggcttaccaccaag 8739462  T
Q  701 tgttt 705  Q
    |||||    
T  8739463 tgttt 8739467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 7e-43
Query Start/End: Original strand, 631 - 826
Target Start/End: Original strand, 13776449 - 13776630
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |  ||||||| |||| | ||||           |     
T  13776449 tgtttctagatatttctagtttgtaatgcagagccttcctagagtagtataaataaggctcaccgctaagtgtttaggcacattcaa-----------ag 13776537  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgag 826  Q
    | |||||||||    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13776538 aatcaagcatt----gaatcattcaagtaatataacttttcgtttgagaatattagagtgtttctctattttctctacctttccttttgtccctgag 13776630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 743 - 829
Target Start/End: Complemental strand, 50855857 - 50855771
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50855857 attgaatcattcaagtaatataacttttcctcgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 50855771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 567 - 693
Target Start/End: Original strand, 43179575 - 43179710
Alignment:
Q  567 tcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt---------tgtttctagatatttctagtttataat 657  Q
    |||| |||||| | ||||||||||||  |||| |||||||||||||| |||||| |||||||||         ||||| |||||||||||||||| ||||    
T  43179575 tcttaacttttttggatccttctagtcatatgaactagagtatccatgtctctatacttttctttgtaatcaatgtttgtagatatttctagtttgtaat 43179674  T
Q  658 ggagagccttcctagagtagtataaataaggctcac 693  Q
    | ||||  || |||||||||||||||| ||||||||    
T  43179675 gcagagtttttctagagtagtataaattaggctcac 43179710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 572 - 706
Target Start/End: Complemental strand, 24908298 - 24908156
Alignment:
Q  572 acttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt--------tgtttctagatatttctagtttataatggagag 663  Q
    |||||||||| || || ||||  |||| |||| ||||||||||||| ||||||||||||        || ||||| || |||||| ||| ||| |  ||     
T  24908298 acttttctaggtctttttagtcatatgaactaaagtatccatatctttagacttttcttgtaataaatgcttctacatctttctactttgtaacgtggaa 24908199  T
Q  664 ccttcctagagtagtataaataaggctcaccacctagtgtttt 706  Q
    |||||||||||||||||||||| || |||||||| ||||||||    
T  24908198 ccttcctagagtagtataaatagggttcaccaccaagtgtttt 24908156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 419 - 482
Target Start/End: Complemental strand, 42468805 - 42468742
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaa 482  Q
    ||||||||||| ||||||||||||| ||||||||| |   |||||||| |||||| ||||||||    
T  42468805 agaatgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagactctagaa 42468742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 768 - 829
Target Start/End: Original strand, 8739501 - 8739562
Alignment:
Q  768 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||| ||||||| ||||||| ||||||  |||||||||  |||||||||| |||||||||||    
T  8739501 tttccttgagaacattagagagtttctttattttctctttctttccttttatccctgagcca 8739562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 270; Significance: 1e-150; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 419 - 829
Target Start/End: Original strand, 31486671 - 31487069
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    |||||| |||| ||||||||||||||||||||||||  || |||||||||||||| |||||||| |||| | ||||| ||||||||||||||||||||||    
T  31486671 agaatggtgaagaataatatggaagactctagaatactagggaataatgtggaagcctctagaagactagagaataatatagaagtctctagaatactag 31486770  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  31486771 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 31486870  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacct-agtgttttggcatactcaa 717  Q
    | |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31486871 tggacttttctttgtttccagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcaccacctaagtgttttggcatactcaa 31486970  T
Q  718 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttccttt 816  Q
    |||| ||||||              ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  31486971 gataatcaagc--------------attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctacctttccttt 31487056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 419 - 831
Target Start/End: Original strand, 31488955 - 31489355
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    |||||| |||| ||||||||||||||||||||||||  || |||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||    
T  31488955 agaatggtgaagaataatatggaagactctagaatactagggaataatgtggaagtctctaaaagactaaagaataatatagaagtctctagaatactag 31489054  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||   |||||||||||||||||||||||||    
T  31489055 ggaataataaggaagctactagacactactaaataagcactagggaagtcttagcttttctagatccttctaagcttatgtactagagtatccatatctc 31489154  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacct-agtgttttggcatactcaa 717  Q
    | |||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  31489155 tggacttttctttgtttccagatatttctagtttgtaatggagagccttcctaaagtagtataaataaggctcaccacctaagtgttttggcatactcaa 31489254  T
Q  718 gatactcaagcatagtcaagcattaattgaatcattcaagtaatataactttt-ctttgagaatattagagtgtttctcaattttctctacctttccttt 816  Q
    |||| ||||||              ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  31489255 gataatcaagc--------------attgaatgattcaagtaatataacttttcctttgagaatattagagtgtttctctattttctctacctttccttt 31489340  T
Q  817 tgtccctgagccaaa 831  Q
    ||||||| |||||||    
T  31489341 tgtccctaagccaaa 31489355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 431 - 718
Target Start/End: Original strand, 29801774 - 29802067
Alignment:
Q  431 aataatatggaagactctagaatagcagagaa-taatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataag 529  Q
    ||||||||||||| ||||||||||  | | || |||| |||||||||||||||||| ||| ||||| |  ||||| ||||||||||||  ||||||||||    
T  29801774 aataatatggaagtctctagaataataaaaaaataatatggaagtctctagaacaccaaagaataatagggaagtatctagaatactaaagaataataag 29801873  T
Q  530 gat----gctactagacactactaaa--taagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagac 623  Q
    ||     ||||||||||||| |||||  |||||||| |  || |||| |  |||||| |||||||||||  |||| |||| || ||||||||||||||||    
T  29801874 gaatctagctactagacact-ctaaaattaagcactggaaaaatcttaatgtttctaaatccttctagtcatatgaactatagcatccatatctctagac 29801972  T
Q  624 ttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    |||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||||| |||||    
T  29801973 ttttctttgtttgtagatatttctagtttgtaatggggagtcttcctagagtagtataaataaggctcaccaccaagtgtttaggcatagtcaag 29802067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 631 - 829
Target Start/End: Complemental strand, 42275739 - 42275556
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| |||| | ||||           |     
T  42275739 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccactaagtgtttaggcacattcaa-----------ag 42275651  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    | ||||| |||    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42275650 aatcaagtatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42275556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 631 - 829
Target Start/End: Complemental strand, 42277965 - 42277782
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||  ||||||| |||| | ||||           |     
T  42277965 tgtttctagatatttctagtttgtaatgtagagtcttcctagagtagtataaataaggctcaccactaagtgtttaggcacattcaa-----------ag 42277877  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    | |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42277876 aatcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 42277782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 421 - 830
Target Start/End: Original strand, 23859767 - 23860188
Alignment:
Q  421 aatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagt----ctctagaacactaaataataaaatagaagtctctagaatact 516  Q
    ||||||||| ||  |||||||| |||||||||||  |  ||||||| ||||| |    ||||||||||||||| ||||| || | |||||||||||||||    
T  23859767 aatgatgaagaaagatatggaacactctagaatactaatgaataatatggaattaagcctctagaacactaaagaataatatgggagtctctagaatact 23859866  T
Q  517 agggaataataaggatgctactagaca--ctactaaataag-----------cactagggaagtcttgacttttctagatccttctagttttatgtacta 603  Q
    | | ||||||||||| ||||||| |||  |||||||||||            |||||| ||| ||||  |||||||||||||||||||| ||||| ||||    
T  23859867 atgaaataataaggaagctactaaacattctactaaataaaataaaattagacactagagaaatcttagcttttctagatccttctagtcttatgaacta 23859966  T
Q  604 gagtatccatatctctagacttttctttgt---------ttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcacc 694  Q
    |||||| ||| | ||||| | |||||||||         ||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  23859967 gagtatgcatgtttctaggcctttctttgtaatcaatatttctagataattctagtttgtaatgtagagccttcctagagtagtataaataaggctcacc 23860066  T
Q  695 acctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttct 794  Q
    ||| |||||||  | ||| |||||||||||||||              |||||| |||| || |||||  |  |||||||||||||||||||| ||||||    
T  23860067 accaagtgtttacgtatattcaagatactcaagc--------------attgaaacatttaaataataatatctttctttgagaatattagagagtttct 23860152  T
Q  795 caattttctctacctttccttttgtccctgagccaa 830  Q
    | ||||||| | | ||||||||||||||||||||||    
T  23860153 ctattttctatgcttttccttttgtccctgagccaa 23860188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 459 - 711
Target Start/End: Complemental strand, 34576969 - 34576694
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacact--actaaataa-- 554  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||  ||||||  |||| |||||| ||||||  |||||||||      
T  34576969 agaataatgtggaagtctctagaacactaaagaataatatggaagtctctaaaatactaaagaataacgaggaagctactggacactctactaaataaaa 34576870  T
Q  555 ---------gcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgt---------ttc 636  Q
             ||||||| ||| |||| |||||||||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||         |||    
T  34576869 taaaattacgcactagagaaatcttaacttttctagatccttctagtcatatgaactagagtattcatgtctctagacttttctttgtaatcaatgtttc 34576770  T
Q  637 tagatatttctagtttataatggagagccttcct-agagtagtataaataaggctcaccacctagtgttttggcat 711  Q
    |||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||||||| | ||||||| |||||    
T  34576769 tagatatttctagtttgtaatgtagagccttcctaagattagtataaataaggctcaccatcaagtgtttaggcat 34576694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 743 - 829
Target Start/End: Complemental strand, 5164237 - 5164151
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5164237 attgaagcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 5164151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 743 - 823
Target Start/End: Complemental strand, 8995156 - 8995076
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccct 823  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  8995156 attgaatcattcaagtaatataacttttctttgagaatattagagagtttctctattttctctacctttccttttgtccct 8995076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 743 - 823
Target Start/End: Original strand, 15730013 - 15730093
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccct 823  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  15730013 attgaatcattcaagtaatataacttttatttgagaatattagagagtttctctattttctctacctttccttttgtccct 15730093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 767 - 829
Target Start/End: Complemental strand, 39816151 - 39816089
Alignment:
Q  767 ttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  39816151 ttttctttgagaatattagagagtttctctattttctctacctttccttttgtccgtgagcca 39816089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 768 - 821
Target Start/End: Complemental strand, 34576665 - 34576612
Alignment:
Q  768 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtcc 821  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  34576665 tttctttgagaatattagagagtttctctattttctctaccttaccttttgtcc 34576612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 419 - 530
Target Start/End: Original strand, 15729871 - 15729981
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||| | |||||||| |  | |||||||||||||||||||||| |||  ||| ||||  |  ||||||||||||||||||     
T  15729871 agaatgatgaagaataatatggatgtctctagaacaataaagaataatgtggaagtctctag-acataaaagaatattaaggaagtctctagaatactaa 15729969  T
Q  519 ggaataataagg 530  Q
     |||||||||||    
T  15729970 agaataataagg 15729981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 666 - 707
Target Start/End: Complemental strand, 8995210 - 8995169
Alignment:
Q  666 ttcctagagtagtataaataaggctcaccacctagtgttttg 707  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  8995210 ttcctagagtagtataaataaggctctccaccaagtgttttg 8995169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 419 - 495
Target Start/End: Complemental strand, 34576979 - 34576903
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataa 495  Q
    ||||||||||| |||||| |||||| |||||||| |  | |||||||| |||||||||||| || |||||| |||||    
T  34576979 agaatgatgaagaataatgtggaagtctctagaacactaaagaataatatggaagtctctaaaatactaaagaataa 34576903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 428 - 495
Target Start/End: Original strand, 29801802 - 29801869
Alignment:
Q  428 aaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataa 495  Q
    |||||||||||||||| |||||||| | || ||||||||  |||||| ||||||| |||||| |||||    
T  29801802 aaaaataatatggaagtctctagaacaccaaagaataatagggaagtatctagaatactaaagaataa 29801869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 237; Significance: 1e-130; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-130
Query Start/End: Original strand, 419 - 829
Target Start/End: Complemental strand, 11852561 - 11852175
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    |||||| |||| ||||||||||||||||||||||||  |   ||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  11852561 agaatggtgaagaataatatggaagactctagaatactatgaaataatgaggaagtctctagaagactaaagaataatatagaagtctctagaatactag 11852462  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||  |||||||||||||||||||||||||    
T  11852461 ggaataataaggaagctactagacactactaaataagcactagggaagtcataacttttctaggaccttctaggcttatgtactagagtatccatatctc 11852362  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  11852361 tagacttttatttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg---------- 11852272  T
Q  719 atactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttg 818  Q
              || |||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11852271 ----------atcgtcaagcat----tgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttg 11852186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 419 - 707
Target Start/End: Original strand, 37207660 - 37207948
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||| ||||| |||||||||| |||||||||||    
T  37207660 agaatgatgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctgtagaatactag 37207759  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||    
T  37207760 ggaataataaggaagctactagacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatgtctc 37207859  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 707  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37207860 tagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 37207948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 419 - 708
Target Start/End: Complemental strand, 23164636 - 23164347
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    |||||| |||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  23164636 agaatggtgaagaataatatggaagactctagaatactagggaataatgtggaagtctctagaagactaaagaataatatagaagtctctagaatactag 23164537  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  23164536 ggaataataaggaagctactagacactactaaataaacactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 23164437  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 708  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23164436 tagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggcccaccacctagtgttttgg 23164347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 419 - 708
Target Start/End: Original strand, 22600700 - 22600989
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||     
T  22600700 agaatgatgaagaataatatggaagactctagaatattagggaataatgtggaagtctctagaagactaaataataatatagaagtctctagaatactat 22600799  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||    
T  22600800 ggaataataagaaagctacttgacactactaaataagcactagggaagtcttaacttttctagatccttctaggcttatgtactagagtatccatatctc 22600899  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 708  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  22600900 tagacttttctttgtttctagatatttctagttggtaatggagagtcttgctaaagtagtataaataaggctcaccacctagtgttttgg 22600989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 419 - 708
Target Start/End: Complemental strand, 11850303 - 11850014
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    |||||| |||| |||||||||||||||||| |||||  |  ||||||||||||||||||||||| |||||| ||||| ||||||||||||| ||||||||    
T  11850303 agaatggtgaagaataatatggaagactcttgaatactatggaataatgtggaagtctctagaagactaaagaataatatagaagtctctaaaatactag 11850204  T
Q  519 ggaataataaggatgctactagacactactaaataagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctc 618  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||||||| ||||||||||||||||    
T  11850203 ggaataataagaaagctactagacactactaaataagcactagggaagtcttaaattttctagatccttctaggcttatgtacaagagtatccatatctc 11850104  T
Q  619 tagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 708  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11850103 tagacttttctttgtttctagatatttctagttggtaatggagagccttcctagagtagtataaataaggctcaccacctagtgttttgg 11850014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 564 - 707
Target Start/End: Original strand, 37215396 - 37215539
Alignment:
Q  564 aagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagag 663  Q
    ||||||| ||||||||||||||||||||  |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||  ||||| ||||    
T  37215396 aagtcttaacttttctagatccttctaggcttatatactagagtatccatgtctctaaacttttctttgtttctagatatttctagttggtaatgaagag 37215495  T
Q  664 ccttcctagagtagtataaataaggctcaccacctagtgttttg 707  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  37215496 ccttcctagagtagtataaataaggctcaccacatagtgttttg 37215539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 459 - 707
Target Start/End: Complemental strand, 1779581 - 1779316
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactagacact--actaaat---- 552  Q
    |||||||| ||||||| ||||||| |||||| ||||| ||||||||||||| ||||||| ||||||||||||| |||||||||||||  |||||||        
T  1779581 agaataatatggaagtttctagaaaactaaagaataatatagaagtctctaaaatactatggaataataaggaagctactagacactccactaaataaaa 1779482  T
Q  553 --aagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt---------tgtttctagat 641  Q
      |||||||||  || |||| |  ||||||||||||||||||  |||| |||||||||||||| | ||||| | ||||||         |||||||||||    
T  1779481 taaagcactagaaaaatcttaatgtttctagatccttctagtcatatgaactagagtatccatgtttctaggcctttctttgtaatcaatgtttctagat 1779382  T
Q  642 atttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttg 707  Q
    | ||||||||| ||||| |||||||||||||||| ||||||||||||||||||| | |||||||||    
T  1779381 aattctagtttgtaatgtagagccttcctagagtggtataaataaggctcaccaacaagtgttttg 1779316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 743 - 830
Target Start/End: Complemental strand, 11850003 - 11849916
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 830  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11850003 attgaatcattcaaataatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 11849916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 743 - 829
Target Start/End: Complemental strand, 23164340 - 23164254
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  23164340 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctaccttcccttttgtccctgagcca 23164254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 743 - 830
Target Start/End: Original strand, 22601000 - 22601088
Alignment:
Q  743 attgaatcattcaagtaatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 830  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||    
T  22601000 attgaagcattcaaataatataatcttttctttgagaatattagagagtttctctattttctctaccttcccttttgtccctgagccaa 22601088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 743 - 829
Target Start/End: Original strand, 37215551 - 37215638
Alignment:
Q  743 attgaatcattcaagtaatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  37215551 attgaagcattcaaataatataatcttttctttgagaatattagagagtttctctattttctctaccttcccttttgtccctgagcca 37215638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 743 - 829
Target Start/End: Complemental strand, 1779303 - 1779222
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||     |||||||||||||||||||||    
T  1779303 attgaatcattcaagtaatataacttttctttgagaatattagagtgttcctctattttct-----tttccttttgtccctgagcca 1779222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 419 - 670
Target Start/End: Complemental strand, 1779855 - 1779587
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactag 518  Q
    ||||||||||| ||||||||||||| |  |||||||  | |||| |||||||||||||| | ||||||||| ||||| || ||||||||||||||||||     
T  1779855 agaatgatgaagaataatatggaagtccttagaatactaaagaaaaatgtggaagtctccataacactaaagaataatatggaagtctctagaatactaa 1779756  T
Q  519 ggaataataaggatgctactagaca--ctact-----aaat-aagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatc 610  Q
     |||||||   || |||||||||||  |||||     |||| |||| |||||||| |||| |  ||||||||||||||||||  |||| |||||| ||||    
T  1779755 agaataatgtcgaagctactagacattctactggataaaataaagcgctagggaaatcttaatgtttctagatccttctagtcatatgaactagaatatc 1779656  T
Q  611 catatctctagacttttctt---------tgtttctagatatttctagtttataatggagagccttcct 670  Q
    | ||||||||| | |||| |         |||||||||||||||||||||| ||||| | |||||||||    
T  1779655 cctatctctaggcctttccttgtaatcaatgtttctagatatttctagtttgtaatgtaaagccttcct 1779587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 751 - 829
Target Start/End: Original strand, 21743719 - 21743797
Alignment:
Q  751 attcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||| ||||||||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  21743719 attcaaataatataaactttctttgagaatattagagagtttctctattttctctacctttccttttgtccctgggcca 21743797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 758 - 829
Target Start/End: Original strand, 37207998 - 37208070
Alignment:
Q  758 taatataa-cttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||||| |||||||| ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  37207998 taatataatcttttcttcgagaatattagagagtttctctattttctctaccttcccttttgtccctgagcca 37208070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 631 - 718
Target Start/End: Original strand, 21743622 - 21743709
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    ||||| ||||||||| |||||| || || ||||||||||||||||||||||||||||  |||||||| |||| || ||||||||||||    
T  21743622 tgtttttagatatttttagtttgtagtgtagagccttcctagagtagtataaataagattcaccaccaagtggttaggcatactcaag 21743709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 768 - 829
Target Start/End: Original strand, 15469197 - 15469258
Alignment:
Q  768 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||||||||||||||||| ||||||| ||||| | |||||||||||||||||||||||||    
T  15469197 tttctttgagaatattagagagtttctctattttttttacctttccttttgtccctgagcca 15469258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 665 - 705
Target Start/End: Complemental strand, 1779221 - 1779181
Alignment:
Q  665 cttcctagagtagtataaataaggctcaccacctagtgttt 705  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  1779221 cttcctagagtagtataaataaggctcaccaccaagtgttt 1779181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 459 - 526
Target Start/End: Original strand, 37207640 - 37207707
Alignment:
Q  459 agaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataat 526  Q
    |||||||| |||||||||||||||   | || ||||| || |||| ||||||||||||||||||||||    
T  37207640 agaataatatggaagtctctagaatgatgaagaataatatggaagactctagaatactagggaataat 37207707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 167; Significance: 8e-89; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 167; E-Value: 8e-89
Query Start/End: Original strand, 594 - 829
Target Start/End: Original strand, 1579 - 1801
Alignment:
Q  594 ttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcac 693  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1579 ttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtttgtaatggagagccttcctagagtagtataaataaggctcac 1678  T
Q  694 cacctagtgttttggcatactcaagatactcaagcatagtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttc 793  Q
    ||||||||||||||||         ||||||||||||  ||||||    ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1679 cacctagtgttttggc---------atactcaagcatcatcaagc----attgaatcattcaagtaatataacttttctttgaggatattagagtgtttc 1765  T
Q  794 tcaattttctctacctttccttttgtccctgagcca 829  Q
    || |||||||||||||||||||||||||||||||||    
T  1766 tctattttctctacctttccttttgtccctgagcca 1801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 2e-64; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 631 - 829
Target Start/End: Original strand, 4530835 - 4531020
Alignment:
Q  631 tgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcat 730  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||         |||    
T  4530835 tgtttctagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactgaag---------cat 4530925  T
Q  731 agtcaagcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
      |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4530926 catcaagcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagcca 4531020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 637 - 830
Target Start/End: Original strand, 4533138 - 4533318
Alignment:
Q  637 tagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaagatactcaagcatagtcaa 736  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||         |||  ||||    
T  4533138 tagatatttctagtttgtaatgtagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactgaag---------catcatcaa 4533228  T
Q  737 gcattaattgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaa 830  Q
    |||||    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4533229 gcatt----gaatcattcaagtaatataacttttctttgagaatattagagtgtttctctattttctctacctttccttttgtccctgagccaa 4533318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 423 - 705
Target Start/End: Complemental strand, 18966518 - 18966221
Alignment:
Q  423 tgatgaaaaataatatggaagactct--agaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctctagaatactaggg 520  Q
    ||||||| ||||||||||||| ||||  ||||||  | ||||||||||||||||||||||||||| ||| ||||| |  |||||||||||||||||||      
T  18966518 tgatgaagaataatatggaagtctctctagaatactaaagaataatgtggaagtctctagaacaccaaagaataatagggaagtctctagaatactagat 18966419  T
Q  521 aataataaggatgctactagacact--actaaat-----------aagcactagggaagtcttgacttttctagatccttctagttttatgtactagagt 607  Q
    ||||||||||  ||||||||| |||  |||||||           |||||||||| || |||| |  ||||||||||||||||||  || ||||||||||    
T  18966418 aataataaggtagctactagatactctactaaatgaaataaaattaagcactaggaaaatcttaatgtttctagatccttctagtcatacgtactagagt 18966319  T
Q  608 atccatatctctagacttttctttgtttctagatatttctagtttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttt 705  Q
    |||||||||||| |||||||||| ||||||||||||||||||| | | |||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  18966318 atccatatctcttgacttttcttggtttctagatatttctagtgtgtcatggagtgtcttcctagagtagtataaataaggctcaccaccaagtgttt 18966221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 556 - 631
Target Start/End: Original strand, 1701104 - 1701179
Alignment:
Q  556 cactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttcttt 631  Q
    |||||||||| |||| |||||||||||||||||||||  |||| | |||| ||||||||| ||||| |||||||||    
T  1701104 cactagggaaatcttaacttttctagatccttctagtcatatgaattagattatccatatttctaggcttttcttt 1701179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 574 - 630
Target Start/End: Original strand, 8535522 - 8535578
Alignment:
Q  574 ttttctagatccttctagttttatgtactagagtatccatatctctagacttttctt 630  Q
    |||| ||||||||||||||  |||  |||| ||||||||||||||||||||||||||    
T  8535522 ttttttagatccttctagtcatataaactaaagtatccatatctctagacttttctt 8535578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000007
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 39578235 - 39578307
Alignment:
Q  423 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataa 495  Q
    ||||||| ||| ||||||||||||||||||||  | ||||||||||| |||| |  ||||||||||| |||||    
T  39578235 tgatgaagaatgatatggaagactctagaatactaaagaataatgtgaaagtttacagaacactaaagaataa 39578307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 99; Significance: 3e-48; HSPs: 6)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 552 - 718
Target Start/End: Original strand, 29261 - 29426
Alignment:
Q  552 taagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatatctctagacttttctttgtttctagatatttctagtt 651  Q
    |||||||||||||| |||| |  ||||||||||||||||||  |||||||||||  ||||||||||||||||||||||| |||||||||||||| |||||    
T  29261 taagcactagggaaatcttaatgtttctagatccttctagtcatatgtactagaacatccatatctctagacttttctt-gtttctagatatttttagtt 29359  T
Q  652 tataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    | |||||||||| ||||||||||||||||||||||||||||||||| ||||  | ||||||||||||    
T  29360 tgtaatggagagtcttcctagagtagtataaataaggctcaccaccaagtgcgtaggcatactcaag 29426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 552 - 718
Target Start/End: Original strand, 31574 - 31741
Alignment:
Q  552 taagcactagggaagtcttgacttttctagatccttctagttttatgtactagagtatccatat--ctctagacttttctttgtttctagatatttctag 649  Q
    |||||||||||||| |||| |  ||||||||||||||||||  |||||||||||  ||||||||  ||||||||||||||| |||| |||||||||||||    
T  31574 taagcactagggaaatcttaatgtttctagatccttctagtcatatgtactagaacatccatatatctctagacttttctt-gtttttagatatttctag 31672  T
Q  650 tttataatggagagccttcctagagtagtataaataaggctcaccacctagtgttttggcatactcaag 718  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||    
T  31673 tttgtaatggagagccttcctagagtagtataaataaggctcaccaccaagtgtgtaggcatactcaag 31741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 768 - 829
Target Start/End: Original strand, 29453 - 29514
Alignment:
Q  768 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  29453 tttctttgagaacattagagagtttctctattttctctacctttccttttgtccctgagcca 29514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 768 - 829
Target Start/End: Original strand, 31768 - 31829
Alignment:
Q  768 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  31768 tttctttgagaacattagagagtttctctattttctctacctttccttttgtccttgagcca 31829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 418 - 506
Target Start/End: Original strand, 31439 - 31527
Alignment:
Q  418 aagaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtct 506  Q
    |||||||||||| ||||||||||||  ||||| || |  | |||| ||||||||||||||||||||||| || ||||| || |||||||    
T  31439 aagaatgatgaagaataatatggaactctctaaaacactaaagaacaatgtggaagtctctagaacactcaagaataatatggaagtct 31527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 419 - 506
Target Start/End: Original strand, 29122 - 29209
Alignment:
Q  419 agaatgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtct 506  Q
    ||||||||||| ||||||||||||| ||||| || |  | |||| ||||||||||||||||||||| | || ||||| || |||||||    
T  29122 agaatgatgaagaataatatggaagtctctaaaacactaaagaacaatgtggaagtctctagaacattcaagaataatatggaagtct 29209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 743 - 829
Target Start/End: Original strand, 88445 - 88531
Alignment:
Q  743 attgaatcattcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  88445 attgaatcattcaagtaatataacttttctttgagaatattagagtctttctctattttctctacctttccttttgtccctgagcca 88531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 45; E-Value: 5e-16
Query Start/End: Original strand, 423 - 507
Target Start/End: Original strand, 73069 - 73153
Alignment:
Q  423 tgatgaaaaataatatggaagactctagaatagcagagaataatgtggaagtctctagaacactaaataataaaatagaagtctc 507  Q
    ||||||| ||||||||||||| ||||||||| |   |||||||| ||||||||||||||| |||||| ||||| |||||||||||    
T  73069 tgatgaagaataatatggaagtctctagaatggtgaagaataatatggaagtctctagaagactaaagaataatatagaagtctc 73153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1361 (Bit Score: 72; Significance: 4e-32; HSPs: 1)
Name: scaffold1361
Description:

Target: scaffold1361; HSP #1
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 743 - 829
Target Start/End: Original strand, 53 - 140
Alignment:
Q  743 attgaatcattcaagtaatataacttttc-tttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  53 attgaatcattcaagtaatataacttttcgtttgagaatattaaagtgtttctctattttctctacctttccttttgtccctgagcca 140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 751 - 829
Target Start/End: Complemental strand, 3785 - 3707
Alignment:
Q  751 attcaagtaatataacttttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagcca 829  Q
    |||||| ||||||||  |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  3785 attcaaataatataaactttctttgagaatattagagagttactctattttctctacctttccttttgtccctgagcca 3707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 8e-21; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 491 - 697
Target Start/End: Original strand, 21199149 - 21199374
Alignment:
Q  491 aataaaatagaagtctctagaatactagggaataataaggatgctactagacact--actaaataa------gcactagggaagtcttgacttttctaga 582  Q
    ||||| || |||||||||||||||||| ||||||||||||| ||||||| |||||  |||||||||      |||||||  || |||| |  ||||||||    
T  21199149 aataatatggaagtctctagaatactatggaataataaggaagctactatacactctactaaataaaataaagcactagttaaatcttaatgtttctaga 21199248  T
Q  583 tccttctagttttatgtactagagtatccatat--ctctagacttttctttgt---------ttctagatatttctagtttataatggagagccttccta 671  Q
    ||||||||||  |||| ||| ||||||||||||  |||||| | |||| ||||         ||||||||||||||||||| ||||| | |||||||||     
T  21199249 tccttctagtcatatgaactggagtatccatatgtctctaggcctttcattgtaatcaatgtttctagatatttctagtttgtaatgtacagccttcctg 21199348  T
Q  672 gagtagtataaataaggctcaccacc 697  Q
    ||||| ||||||||||| ||||||||    
T  21199349 gagtactataaataaggttcaccacc 21199374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 768 - 827
Target Start/End: Original strand, 20642300 - 20642359
Alignment:
Q  768 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagc 827  Q
    ||||||||||||||||||||  |||||| |||||||||||||||| ||||||||||||||    
T  20642300 tttctttgagaatattagagaatttctctattttctctacctttcattttgtccctgagc 20642359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 470 - 541
Target Start/End: Original strand, 11287 - 11358
Alignment:
Q  470 gaagtctctagaacactaaataataaaatagaagtctctagaatactagggaataataaggatgctactaga 541  Q
    |||||||||||||||||||| ||||| || |||||||||| |||  ||  |||||||||||| |||||||||    
T  11287 gaagtctctagaacactaaagaataatatggaagtctctataatgttaaagaataataaggaagctactaga 11358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000004; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 768 - 832
Target Start/End: Original strand, 64082 - 64144
Alignment:
Q  768 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 832  Q
    ||||||||||||||||  || ||||||| ||||||| |||||||| ||||||| |||| ||||||    
T  64082 tttctttgagaatatt--agggtttctctattttctttacctttcattttgtctctgatccaaat 64144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 768 - 832
Target Start/End: Original strand, 71414 - 71476
Alignment:
Q  768 tttctttgagaatattagagtgtttctcaattttctctacctttccttttgtccctgagccaaat 832  Q
    ||||||||||||||||  || ||||||| ||||||| |||||||| ||||||| |||| ||||||    
T  71414 tttctttgagaatatt--agggtttctctattttctttacctttcattttgtctctgatccaaat 71476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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