View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9043_high_8 (Length: 237)
Name: NF9043_high_8
Description: NF9043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9043_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 42146863 - 42146653
Alignment:
| Q |
9 |
agaagcagagatcttaaacaagttatcatacatcaatctttctgcgtagacaaaagtaagctaagaaccgaaagcaaatagccatggctatcagaatcca |
108 |
Q |
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| T |
42146863 |
agaagtagagatcttaaacaagttatcatacatcaatctttctgcgtagacaaaagtaagctaagaaccgaaagcaaatagccatggctatcagaatcca |
42146764 |
T |
|
| Q |
109 |
aacttcacttaggcctcctttcaagtttacagtatcaaatgaaggtgaactttgaagtgttctgcaccctccatcactttcacattcatatagttggtca |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42146763 |
aacttcacttaggcctcctttcaagtttacagtatcaaatgaaggtgaactttgaagtgttctgcaccctccatcactttcacattcatatagttggtca |
42146664 |
T |
|
| Q |
209 |
cctgaatattg |
219 |
Q |
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| T |
42146663 |
cctgaatattg |
42146653 |
T |
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