View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9043_low_12 (Length: 286)
Name: NF9043_low_12
Description: NF9043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9043_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 269
Target Start/End: Original strand, 41023572 - 41023827
Alignment:
| Q |
11 |
cagagagttaggatcctgcagaagtttggtgaaaagttccttgttcgaatataaaacctgtacagcatccaaaaattgattaggctgacaatctgcacca |
110 |
Q |
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| T |
41023572 |
cagagagttaggatcttgcagaagtttggtgaaaagttccttgttcgaatataaaacctgtacagcatccaaaaattgattaggctgacaatctgcacca |
41023671 |
T |
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| Q |
111 |
tcttttcctttagagtttttgttgaaaaatctctgattaacaatcatttttgttacttcattttccaaatctgctacccgatcattctccacacgtacac |
210 |
Q |
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| T |
41023672 |
tcttttcctttagagtttttgttgaaaaatctctgattaacaatcatttttgttacttcattttccaaatctgctacccgatcattctccacacgtacac |
41023771 |
T |
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| Q |
211 |
tcttacaactataacctcttcttcttcttctggaacatgcctgtagttaaaattcttcc |
269 |
Q |
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| T |
41023772 |
tcttacaactataacc---tcttcttcttctggaacatacctgtagttaaaattcttcc |
41023827 |
T |
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