View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9046_high_9 (Length: 244)
Name: NF9046_high_9
Description: NF9046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9046_high_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 37893669 - 37893912
Alignment:
| Q |
1 |
tcaatgctactatttgtttttcctaatgatggatatcttggtgttgtgcctaatatttatatatttgtgggccatatatggtcaaaattctattagtatg |
100 |
Q |
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| T |
37893669 |
tcaatgctactatttgtttttcctaatgatggatatcttggtgttttgcctaatatttatatatttgtgggccatatatggtcaaaattctattagtatg |
37893768 |
T |
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| Q |
101 |
actgctctatctggttgaaaatgacagcccacgggtgatgacaaccttagcaatattaaaatatgttaaaccaaatgatcaatttgacattttgattagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37893769 |
actgctctatctggttgaaaatgacagcccacgggtgatgacaaccttagcaatattaaaatatgttaaaccaaatgatcaatttgacattttgattagc |
37893868 |
T |
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| Q |
201 |
tttcattttcattannnnnnnctagctgttaacattgctctcta |
244 |
Q |
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| T |
37893869 |
tttcattttcattatttttttctaactgttaacattgctctcta |
37893912 |
T |
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