View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9047_high_1 (Length: 372)

Name: NF9047_high_1
Description: NF9047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9047_high_1
NF9047_high_1
[»] chr5 (26 HSPs)
chr5 (89-362)||(20923571-20923843)
chr5 (14-214)||(43234868-43235068)
chr5 (14-214)||(18051462-18051659)
chr5 (17-214)||(19578942-19579139)
chr5 (26-213)||(18843716-18843903)
chr5 (27-214)||(21059098-21059284)
chr5 (26-213)||(23172369-23172560)
chr5 (18-203)||(41688598-41688782)
chr5 (48-214)||(22645681-22645848)
chr5 (21-206)||(27340126-27340307)
chr5 (21-165)||(19979648-19979792)
chr5 (52-215)||(38158221-38158384)
chr5 (26-165)||(20320992-20321130)
chr5 (147-212)||(19042451-19042516)
chr5 (21-70)||(26021464-26021513)
chr5 (148-212)||(20320926-20320990)
chr5 (26-115)||(19042368-19042448)
chr5 (147-210)||(24106645-24106708)
chr5 (24-70)||(24648160-24648206)
chr5 (32-72)||(19377742-19377782)
chr5 (24-70)||(22984753-22984799)
chr5 (78-116)||(38158154-38158192)
chr5 (76-116)||(18843916-18843956)
chr5 (76-116)||(20321144-20321184)
chr5 (76-116)||(21059045-21059085)
chr5 (32-72)||(41427548-41427588)
[»] chr7 (48 HSPs)
chr7 (4-213)||(5058530-5058739)
chr7 (14-214)||(44944774-44944978)
chr7 (24-214)||(24725416-24725606)
chr7 (25-214)||(14055251-14055440)
chr7 (25-214)||(14365279-14365468)
chr7 (18-215)||(4247355-4247552)
chr7 (26-215)||(24990012-24990201)
chr7 (30-214)||(27221418-27221602)
chr7 (31-214)||(26281256-26281438)
chr7 (34-214)||(5715290-5715469)
chr7 (17-212)||(8346464-8346660)
chr7 (17-214)||(8343731-8343929)
chr7 (44-205)||(11324988-11325148)
chr7 (14-214)||(8329973-8330174)
chr7 (15-175)||(17811386-17811546)
chr7 (4-208)||(20570804-20571002)
chr7 (16-214)||(26617407-26617605)
chr7 (52-214)||(22687631-22687793)
chr7 (61-214)||(9685220-9685373)
chr7 (61-214)||(7730319-7730471)
chr7 (76-214)||(11326386-11326524)
chr7 (56-194)||(27509914-27510052)
chr7 (76-214)||(39182260-39182397)
chr7 (92-214)||(21846433-21846554)
chr7 (90-207)||(8571250-8571367)
chr7 (32-214)||(6916786-6916961)
chr7 (76-174)||(1977692-1977790)
chr7 (24-72)||(21846385-21846433)
chr7 (148-210)||(4574475-4574537)
chr7 (153-215)||(30294174-30294236)
chr7 (76-116)||(7730247-7730287)
chr7 (76-116)||(21846335-21846375)
chr7 (24-70)||(1981275-1981321)
chr7 (76-121)||(4247552-4247597)
chr7 (129-214)||(8630002-8630087)
chr7 (24-76)||(17809067-17809119)
chr7 (26-70)||(21157625-21157669)
chr7 (122-214)||(21157811-21157903)
chr7 (76-116)||(26565436-26565476)
chr7 (84-119)||(26281219-26281254)
chr7 (34-77)||(26565497-26565540)
chr7 (18-53)||(27509344-27509379)
chr7 (32-70)||(25842691-25842729)
chr7 (148-214)||(26565691-26565757)
chr7 (76-105)||(8329867-8329896)
chr7 (152-205)||(17809440-17809493)
chr7 (76-116)||(8329932-8329972)
chr7 (76-116)||(24725360-24725400)
[»] chr1 (36 HSPs)
chr1 (14-214)||(13276195-13276395)
chr1 (17-214)||(9954967-9955164)
chr1 (4-207)||(16125374-16125580)
chr1 (21-215)||(23528655-23528849)
chr1 (37-212)||(19009898-19010073)
chr1 (25-213)||(42180005-42180193)
chr1 (28-214)||(25146712-25146897)
chr1 (26-214)||(9352004-9352192)
chr1 (15-210)||(13100195-13100388)
chr1 (16-214)||(18304742-18304940)
chr1 (19-214)||(9327147-9327344)
chr1 (37-212)||(12513283-12513458)
chr1 (14-213)||(17869679-17869873)
chr1 (21-214)||(9128776-9128969)
chr1 (76-214)||(41032661-41032799)
chr1 (26-214)||(21846215-21846397)
chr1 (27-126)||(32881415-32881514)
chr1 (24-115)||(47785958-47786049)
chr1 (34-137)||(18228278-18228380)
chr1 (81-214)||(17055995-17056128)
chr1 (147-214)||(30619075-30619142)
chr1 (119-216)||(14074404-14074501)
chr1 (110-214)||(18337547-18337650)
chr1 (133-214)||(12800629-12800710)
chr1 (148-214)||(34478833-34478899)
chr1 (24-72)||(12002811-12002859)
chr1 (129-211)||(27917496-27917578)
chr1 (169-214)||(47785792-47785837)
chr1 (163-203)||(8772715-8772755)
chr1 (76-116)||(13100391-13100431)
chr1 (25-76)||(16446699-16446750)
chr1 (24-77)||(27917310-27917363)
chr1 (76-112)||(16125343-16125379)
chr1 (76-116)||(18304699-18304739)
chr1 (76-116)||(21846162-21846202)
chr1 (76-116)||(23528857-23528897)
[»] chr4 (44 HSPs)
chr4 (4-214)||(9911330-9911541)
chr4 (27-214)||(5361905-5362092)
chr4 (18-214)||(36120824-36121020)
chr4 (26-214)||(9770112-9770300)
chr4 (15-212)||(5375666-5375863)
chr4 (17-214)||(13023567-13023767)
chr4 (27-214)||(8889228-8889415)
chr4 (19-213)||(17466080-17466274)
chr4 (17-214)||(10142899-10143096)
chr4 (14-214)||(23064890-23065092)
chr4 (16-214)||(37240262-37240455)
chr4 (61-214)||(13551598-13551751)
chr4 (81-216)||(8011212-8011347)
chr4 (110-213)||(7044728-7044831)
chr4 (110-214)||(7452420-7452523)
chr4 (110-214)||(18459733-18459837)
chr4 (121-214)||(24719517-24719610)
chr4 (111-214)||(4156763-4156866)
chr4 (110-210)||(7815561-7815661)
chr4 (135-210)||(6347114-6347189)
chr4 (163-214)||(9149813-9149864)
chr4 (149-214)||(46664421-46664486)
chr4 (24-70)||(5846058-5846104)
chr4 (24-70)||(9149663-9149709)
chr4 (79-116)||(4157053-4157090)
chr4 (24-77)||(7825186-7825239)
chr4 (24-77)||(8011076-8011129)
chr4 (110-159)||(10394565-10394614)
chr4 (76-116)||(10143101-10143141)
chr4 (76-115)||(6346843-6346882)
chr4 (24-70)||(8409725-8409771)
chr4 (32-70)||(18403672-18403710)
chr4 (32-66)||(24719722-24719756)
chr4 (76-110)||(24719782-24719816)
chr4 (24-70)||(55476119-55476165)
chr4 (32-77)||(7045078-7045123)
chr4 (178-214)||(610683-610719)
chr4 (76-116)||(7044964-7045004)
chr4 (41-77)||(7815783-7815819)
chr4 (76-116)||(8011024-8011064)
chr4 (170-214)||(8744087-8744131)
chr4 (76-112)||(9911299-9911335)
chr4 (76-116)||(17466280-17466320)
chr4 (76-116)||(36121024-36121064)
[»] chr6 (41 HSPs)
chr6 (26-215)||(15528051-15528240)
chr6 (14-202)||(23897823-23898011)
chr6 (17-214)||(17543672-17543869)
chr6 (14-214)||(26053225-26053425)
chr6 (14-214)||(26073278-26073478)
chr6 (14-214)||(30912341-30912541)
chr6 (34-214)||(7223519-7223692)
chr6 (14-214)||(17250057-17250256)
chr6 (14-214)||(19748333-19748533)
chr6 (42-214)||(7918338-7918510)
chr6 (26-214)||(21354748-21354928)
chr6 (32-214)||(11327518-11327700)
chr6 (26-214)||(17103202-17103383)
chr6 (21-210)||(10508954-10509148)
chr6 (76-214)||(27233268-27233406)
chr6 (43-206)||(22498843-22499006)
chr6 (89-214)||(6943464-6943589)
chr6 (55-211)||(2912218-2912373)
chr6 (129-214)||(18491081-18491166)
chr6 (137-212)||(3573984-3574059)
chr6 (147-214)||(5422810-5422877)
chr6 (19-80)||(7918282-7918343)
chr6 (37-92)||(27614594-27614651)
chr6 (21-70)||(645417-645466)
chr6 (76-116)||(10508905-10508945)
chr6 (112-194)||(4841946-4842026)
chr6 (151-214)||(10958253-10958316)
chr6 (14-57)||(27233228-27233271)
chr6 (24-69)||(5422599-5422644)
chr6 (150-207)||(8545030-8545087)
chr6 (24-68)||(27890519-27890563)
chr6 (77-116)||(4841718-4841757)
chr6 (152-214)||(12245109-12245171)
chr6 (75-116)||(2912148-2912189)
chr6 (76-121)||(17103391-17103436)
chr6 (85-114)||(18490536-18490565)
chr6 (122-187)||(18490998-18491063)
chr6 (147-215)||(7359848-7359915)
chr6 (76-116)||(7918238-7918278)
chr6 (76-116)||(19748534-19748574)
chr6 (76-116)||(22498328-22498368)
[»] chr8 (35 HSPs)
chr8 (14-214)||(11879600-11879800)
chr8 (14-214)||(11897016-11897216)
chr8 (19-212)||(15294672-15294865)
chr8 (19-212)||(15475041-15475234)
chr8 (26-214)||(5922049-5922237)
chr8 (17-210)||(31424167-31424360)
chr8 (30-212)||(19704400-19704583)
chr8 (17-215)||(45403028-45403226)
chr8 (17-210)||(3094175-3094378)
chr8 (18-165)||(23142224-23142371)
chr8 (27-214)||(27836406-27836593)
chr8 (18-175)||(6810861-6811017)
chr8 (29-202)||(22910146-22910319)
chr8 (17-213)||(29384249-29384444)
chr8 (18-210)||(7489216-7489409)
chr8 (17-214)||(17646993-17647192)
chr8 (25-210)||(6292282-6292467)
chr8 (35-144)||(32424402-32424511)
chr8 (32-126)||(9212202-9212296)
chr8 (139-214)||(477101-477176)
chr8 (76-205)||(15231733-15231862)
chr8 (112-214)||(15761466-15761568)
chr8 (167-210)||(23136353-23136396)
chr8 (135-214)||(24056618-24056697)
chr8 (76-116)||(29384200-29384240)
chr8 (169-213)||(9036757-9036801)
chr8 (76-116)||(17647198-17647238)
chr8 (82-114)||(26879778-26879810)
chr8 (82-114)||(30240264-30240296)
chr8 (32-70)||(40541781-40541819)
chr8 (84-121)||(26574948-26574985)
chr8 (76-116)||(15761246-15761286)
chr8 (24-77)||(15761298-15761353)
chr8 (32-68)||(16752156-16752192)
chr8 (76-112)||(23142379-23142415)
[»] chr2 (42 HSPs)
chr2 (14-214)||(31237905-31238106)
chr2 (19-212)||(31578007-31578199)
chr2 (17-214)||(1404783-1404983)
chr2 (27-213)||(35565896-35566082)
chr2 (18-214)||(36429848-36430044)
chr2 (40-214)||(30432419-30432593)
chr2 (19-214)||(15588786-15588978)
chr2 (32-214)||(20063714-20063896)
chr2 (85-214)||(23863321-23863450)
chr2 (14-125)||(1690657-1690768)
chr2 (81-212)||(25539222-25539353)
chr2 (88-216)||(19491853-19491982)
chr2 (108-214)||(1690785-1690891)
chr2 (112-214)||(17995055-17995157)
chr2 (17-66)||(19492079-19492128)
chr2 (115-214)||(16766710-16766809)
chr2 (112-175)||(31023262-31023325)
chr2 (15-77)||(34841717-34841779)
chr2 (109-214)||(15266082-15266187)
chr2 (24-77)||(25539085-25539138)
chr2 (76-116)||(13502561-13502601)
chr2 (14-54)||(19262245-19262285)
chr2 (150-213)||(15516624-15516687)
chr2 (163-214)||(19245153-19245204)
chr2 (76-115)||(27406993-27407032)
chr2 (24-70)||(41002156-41002202)
chr2 (24-77)||(16766922-16766975)
chr2 (32-72)||(974467-974507)
chr2 (111-214)||(5395674-5395777)
chr2 (110-204)||(13503067-13503162)
chr2 (111-186)||(34841584-34841659)
chr2 (180-210)||(15627659-15627689)
chr2 (32-70)||(26251658-26251696)
chr2 (76-105)||(16766997-16767026)
chr2 (31-72)||(21869280-21869321)
chr2 (37-69)||(5395475-5395507)
chr2 (76-116)||(15588742-15588782)
chr2 (82-114)||(19519577-19519609)
chr2 (150-214)||(24473336-24473400)
chr2 (76-116)||(30433016-30433056)
chr2 (82-114)||(34841784-34841816)
chr2 (76-116)||(35565845-35565885)
[»] scaffold0186 (2 HSPs)
scaffold0186 (19-214)||(8443-8638)
scaffold0186 (76-116)||(8642-8682)
[»] scaffold0417 (1 HSPs)
scaffold0417 (14-214)||(7384-7584)
[»] chr3 (53 HSPs)
chr3 (48-214)||(29067284-29067450)
chr3 (21-214)||(8156066-8156260)
chr3 (15-211)||(39427905-39428101)
chr3 (26-214)||(28745770-28745964)
chr3 (17-214)||(24620132-24620332)
chr3 (52-209)||(17064326-17064483)
chr3 (61-214)||(20756039-20756192)
chr3 (58-213)||(3449265-3449419)
chr3 (17-205)||(21963438-21963626)
chr3 (17-205)||(21985874-21986062)
chr3 (17-214)||(22137278-22137473)
chr3 (17-141)||(42696920-42697044)
chr3 (14-214)||(22355991-22356182)
chr3 (28-196)||(22494731-22494892)
chr3 (19-126)||(15515190-15515297)
chr3 (81-214)||(24649684-24649818)
chr3 (88-214)||(30727694-30727820)
chr3 (217-362)||(3181511-3181658)
chr3 (110-214)||(15806531-15806634)
chr3 (68-214)||(25870350-25870505)
chr3 (110-214)||(27676356-27676460)
chr3 (112-213)||(28135723-28135824)
chr3 (114-214)||(17796377-17796477)
chr3 (114-214)||(17796486-17796586)
chr3 (114-214)||(19104817-19104917)
chr3 (114-214)||(19104926-19105026)
chr3 (14-57)||(25870251-25870294)
chr3 (110-204)||(10872971-10873065)
chr3 (154-214)||(13005927-13005987)
chr3 (114-210)||(17796272-17796368)
chr3 (114-210)||(19104712-19104808)
chr3 (166-210)||(42696870-42696914)
chr3 (37-86)||(9152935-9152984)
chr3 (76-116)||(3449198-3449238)
chr3 (76-116)||(6136457-6136497)
chr3 (32-72)||(8592359-8592399)
chr3 (77-113)||(17796771-17796807)
chr3 (77-113)||(19105211-19105247)
chr3 (76-116)||(25870210-25870250)
chr3 (32-70)||(19348684-19348722)
chr3 (32-70)||(27676579-27676617)
chr3 (32-68)||(9169806-9169842)
chr3 (76-116)||(10872603-10872643)
chr3 (76-116)||(13286145-13286185)
chr3 (76-116)||(17064508-17064548)
chr3 (76-116)||(20756223-20756263)
chr3 (76-116)||(21963632-21963672)
chr3 (76-116)||(21986068-21986108)
chr3 (76-116)||(22137478-22137518)
chr3 (76-116)||(27676637-27676677)
chr3 (76-116)||(28745977-28746017)
chr3 (76-116)||(39428104-39428144)
chr3 (76-116)||(42697049-42697089)
[»] scaffold0042 (2 HSPs)
scaffold0042 (14-214)||(93634-93833)
scaffold0042 (76-116)||(93593-93633)
[»] scaffold0510 (1 HSPs)
scaffold0510 (76-202)||(91-218)
[»] scaffold0036 (1 HSPs)
scaffold0036 (110-214)||(37191-37295)
[»] scaffold0048 (1 HSPs)
scaffold0048 (136-214)||(48839-48917)
[»] scaffold0016 (2 HSPs)
scaffold0016 (39-93)||(58736-58790)
scaffold0016 (76-116)||(56313-56353)
[»] scaffold0115 (1 HSPs)
scaffold0115 (129-214)||(35103-35188)
[»] scaffold0603 (3 HSPs)
scaffold0603 (25-77)||(8900-8952)
scaffold0603 (114-214)||(9049-9149)
scaffold0603 (76-116)||(8847-8887)
[»] scaffold0017 (1 HSPs)
scaffold0017 (32-72)||(38491-38531)
[»] scaffold0061 (1 HSPs)
scaffold0061 (32-67)||(76273-76308)
[»] scaffold1178 (1 HSPs)
scaffold1178 (24-70)||(466-512)
[»] scaffold0526 (1 HSPs)
scaffold0526 (25-70)||(8288-8332)
[»] scaffold0027 (1 HSPs)
scaffold0027 (32-69)||(133075-133112)
[»] scaffold0684 (1 HSPs)
scaffold0684 (24-68)||(5164-5208)
[»] scaffold0001 (1 HSPs)
scaffold0001 (24-68)||(142764-142808)


Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 89 - 362
Target Start/End: Complemental strand, 20923843 - 20923571
Alignment:
Q  89 aaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttagg 188  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  189 atttaagtcgggattttgacaacaattaaaccctaaaaagtgcaagaaactaacattactgataagaagnnnnnnnnnnctacatttgctagtatctaca 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||    
T  20923743 atttaagtcgggattttgacaacaattaaaccctaaaaagtgcaagaaactaacattactgataagaag-aaaaaaaaactacatttgctagtatctaca 20923645  T
Q  289 caaggtcattgagataccaggcaaaggaaaaaagggatcatttatttagcattggagtcataatgtccatctta 362  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||  ||||||| || |||| ||||    
T  20923644 caaggtcattgagataccaggcaaagaaaaaaagggatcattcatttagcatctgagtcatgatttccacctta 20923571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 43235068 - 43234868
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||| ||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||| |||||||    
T  43235068 accaaaagataataatagtaagtatatgttataaatggtttatagacataaatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggat 43234969  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  43234968 ttttcctattttaggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaa 43234869  T
Q  214 t 214  Q
    |    
T  43234868 t 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 18051462 - 18051659
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  18051462 accaaaaaataataatactaaatatatgttataaat--tatat-gtcataaatgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggat 18051558  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||||||||||||||||||||||||| |||||  |||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  18051559 tttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaa 18051658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 19579139 - 19578942
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||| |||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  19579139 aaaaaaaaataataccaaatatatgttatgaatggtaaatagtcataaatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggatttt 19579040  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    || |||||| | ||||||||||||||||| ||||||||||||||||||| ||||||||| ||| |||||| ||||||||| || ||||||||||||||    
T  19579039 gcttattttgggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaat 19578942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 26 - 213
Target Start/End: Complemental strand, 18843903 - 18843716
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||| |||||| |||||||    
T  18843903 taatactaaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctatttt 18843804  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
     | ||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||    
T  18843803 gggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 21059098 - 21059284
Alignment:
Q  27 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||      
T  21059098 aatactaaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttag 21059197  T
Q  127 gaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    | ||||||| ||||||||  ||||||||| ||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||    
T  21059198 ggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 21059284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 26 - 213
Target Start/End: Original strand, 23172369 - 23172560
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat----tttgccta 121  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| |||    |||| |||    
T  23172369 taatattaaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtcta 23172468  T
Q  122 ttttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||| | ||||||||||||||||| |||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  23172469 ttttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 41688598 - 41688782
Alignment:
Q  18 aaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttg 117  Q
    ||||| |||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  41688598 aaaaaaaataatactaaatatatgttatgaatggtatatagttataaatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttg 41688697  T
Q  118 cctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggatt 203  Q
    | |||||||||||| ||||||  ||||| ||||||||||||||||||| | |||||| || |||||||||||||||||| ||||||    
T  41688698 cttattttagaattttactataaatttaagtcgttgaaggtgaagaaaattgcaaaa-tccgaattttaggatttaagttgggatt 41688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 48 - 214
Target Start/End: Original strand, 22645681 - 22645848
Alignment:
Q  48 atggtatatagtcataaatgac-ttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttag 146  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| ||| | |||||| | ||| |||||||||||||     
T  22645681 atggtatatagtcataaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaa 22645780  T
Q  147 gtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  22645781 atcgttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaat 22645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 21 - 206
Target Start/End: Original strand, 27340126 - 27340307
Alignment:
Q  21 aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcct 120  Q
    |||||||||||||||||||||||| ||||||||||||||    ||||||||||||||||||||||  ||||||| |||||||||| |||| |||||||||    
T  27340126 aataataatactaaatatatgttacaaatggtatatagt----aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcct 27340221  T
Q  121 attttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttg 206  Q
    ||||||  |||||||||| |||||  |||||||||| ||||||||||||||||||  | ||||||| |||||||||||||||||||    
T  27340222 attttaagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 19979792 - 19979648
Alignment:
Q  21 aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcct 120  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  19979792 aataataataataaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgt 19979693  T
Q  121 attttagaattctactatggatttaggtcgttgaaggtgaagaaa 165  Q
     |||| | ||||||| ||| ||||  |||||||||| ||||||||    
T  19979692 gttttgggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 52 - 215
Target Start/End: Original strand, 38158221 - 38158384
Alignment:
Q  52 tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgt 151  Q
    ||||||||||||||||| ||||||||||||||||||||||||  ||| ||||||  |||||||||| ||||||| | |||||||| |||||||  || ||    
T  38158221 tatatagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattctactctggatttgagttgt 38158320  T
Q  152 tgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatt 215  Q
    |||| || |||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||    
T  38158321 tgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaatt 38158384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 20321130 - 20320992
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||  |||||||    
T  20321130 taatattaaatatatgttataaatgatatatggtcataaatgacttagtttataagaa-tcgtaaaatcgcaatcaaagttgatgaattttatctatttt 20321032  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaa 165  Q
     ||||| ||||||||||||  ||| |||||||||||||||    
T  20321031 ggaattttactatggattttagtcattgaaggtgaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 147 - 212
Target Start/End: Original strand, 19042451 - 19042516
Alignment:
Q  147 gtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    |||||||||||||||||||||| ||||||  | |||||||| |||||||| |||||||||||||||    
T  19042451 gtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 26021513 - 26021464
Alignment:
Q  21 aataataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  26021513 aataataatgctaaatatatgttataaattgtatatagtcataaatgact 26021464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 20320990 - 20320926
Alignment:
Q  148 tcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    |||||||||||||||||||| |||||||  | |||||||||||||| || |||||||||||||||    
T  20320990 tcgttgaaggtgaagaaagttgcaaaatcttaaattttaggatttaggttgggattttgacaaca 20320926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 19042368 - 19042448
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    ||||||||||||||||||| |||| ||||||||||||          ||||||||||||||||||||||||||||||||| ||| |||||    
T  19042368 taatactaaatatatgttagaaattgtatatagtcatc---------gtttataagaaatcgtaaaatcgcaatcaaaatcgatagattt 19042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 24106708 - 24106645
Alignment:
Q  147 gtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    |||||||  |||||||||||| ||||||| |||||||||| ||||||| || ||||||||||||    
T  24106708 gtcgttgctggtgaagaaagttgcaaaatcctgaattttatgatttaaatcaggattttgacaa 24106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 24648206 - 24648160
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||||    
T  24648206 aataatgctaaatatatattataaattgtatatagtcataaatgact 24648160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 19377782 - 19377742
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgactta 72  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  19377782 taaatatatgttataaattggatatagtcataaatgactta 19377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 22984753 - 22984799
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| ||||||||||||||||||| | ||||||||||| ||||||    
T  22984753 aataatgctaaatatatgttataaattgcatatagtcatagatgact 22984799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 116
Target Start/End: Original strand, 38158154 - 38158192
Alignment:
Q  78 taagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  38158154 taagaaattgtaaaatcacaatcaaaattgatggatttt 38158192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 18843956 - 18843916
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  18843956 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 18843916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 20321184 - 20321144
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  20321184 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 20321144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 21059045 - 21059085
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  21059045 tataagaaattataaaatcgcaatcaaaatcgatggatttt 21059085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 41427588 - 41427548
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgactta 72  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  41427588 taaatatatattataaattgcatatagtcataaatgactta 41427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 178; Significance: 6e-96; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 5058739 - 5058530
Alignment:
Q  4 gatggacatcaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaa 103  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5058739 gatggactttaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaa 5058640  T
Q  104 attgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggatt 203  Q
    || |  |||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5058639 atcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctgaattttaggatttaagtcgggatt 5058540  T
Q  204 ttgacaacaa 213  Q
    ||||||||||    
T  5058539 ttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 44944774 - 44944978
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  44944774 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggat 44944873  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaag----gtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    |||| ||||||||| ||||||||||||||||   |||||||||    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44944874 tttgactattttaggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgaca 44944973  T
Q  210 acaat 214  Q
    |||||    
T  44944974 acaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 24725416 - 24725606
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  24725416 aataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtcaaatcgtaatcaaaattgatggattttgcctatt 24725515  T
Q  124 ttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||   ||||||||||||||||  || |||||||||||||||||||| |||||  || ||||||||||||||||| ||||||||||||||||    
T  24725516 ttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttgacaacaat 24725606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 14055440 - 14055251
Alignment:
Q  25 ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattt 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  14055440 ataatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattt 14055341  T
Q  125 tagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||||||  || |||||||||| ||||| |||||||| ||||||||    
T  14055340 tagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaat 14055251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 14365468 - 14365279
Alignment:
Q  25 ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattt 124  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  14365468 ataatattaaatatatgttataaatggtatatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattt 14365369  T
Q  125 tagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||||||  || |||||||||| ||||| |||||||| ||||||||    
T  14365368 tagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaat 14365279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 4247552 - 4247355
Alignment:
Q  18 aaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttg 117  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||    
T  4247552 aaaaaaaataatactaaatatatgttacaaatgatatatagtcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttg 4247453  T
Q  118 cctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatt 215  Q
    |||||||| | ||||||||||||||||| || |||||| |||||||||||  |||||| |||||||||||||||||| | ||||||||||||||||||    
T  4247452 cctattttgggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaatt 4247355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 24990012 - 24990201
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  24990012 taatactaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctatttt 24990111  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatt 215  Q
    || ||||||||||||||||  ||||||| |||| ||||||||| |||||| || |||||| ||||||||||||| |||||||||||||||    
T  24990112 aggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaatt 24990201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 30 - 214
Target Start/End: Complemental strand, 27221602 - 27221418
Alignment:
Q  30 actaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaa 129  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  |    
T  27221602 actatatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaaga 27221503  T
Q  130 ttctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||| ||||  |||||||||| |||||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||    
T  27221502 ttctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaat 27221418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 31 - 214
Target Start/End: Original strand, 26281256 - 26281438
Alignment:
Q  31 ctaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaat 130  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||| ||||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaat 26281354  T
Q  131 tctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  26281355 tctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 26281438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 5715469 - 5715290
Alignment:
Q  34 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattct 133  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||| |||||||    
T  5715469 aatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattct 5715370  T
Q  134 actatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||| ||||| || |||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5715369 actatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 17 - 212
Target Start/End: Original strand, 8346464 - 8346660
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    |||||||||||||||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  8346464 aaaaaataataatactaaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggattt 8346563  T
Q  116 tgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    | |||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||| || |||||||  ||||| ||| ||||||||||||||    
T  8346564 ttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 8343731 - 8343929
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    |||||||||||||||||||||||  ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8343731 aaaaaataataatactaaatataacttataaaatggtatataatcatagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggattt 8343830  T
Q  116 tgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    | | |||||| | ||||||||||||||||  ||||||||||||||||||||||||||||| | | ||||||||||||| | |  |||||||||||||||    
T  8343831 ttcatattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaat 8343929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 44 - 205
Target Start/End: Complemental strand, 11325148 - 11324988
Alignment:
Q  44 ataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatt 143  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  11325148 ataattggtatatagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaatt-atgaattttgcctattttagaattctattatggatt 11325050  T
Q  144 taggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggatttt 205  Q
    |  ||||||||||||||||||| || ||||||  ||||||||||||||||||||||||||||    
T  11325049 tgagtcgttgaaggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 8329973 - 8330174
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgga 112  Q
    ||||||||| |  |||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||| |    
T  8329973 accaaaaaaaataaataataagtatatgttataaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaa 8330072  T
Q  113 ttttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    |||| |||||||| | ||||||||||||||||   ||||||||||||||||||||||||||||  |||||||||| ||||| ||| ||||||||||||||    
T  8330073 tttttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaaca 8330172  T
Q  213 at 214  Q
    ||    
T  8330173 at 8330174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 17811546 - 17811386
Alignment:
Q  15 ccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||||| ||||| ||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  17811546 ccaaaaaatattaatattaaatatattttataaatggtatataattataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgatt 17811447  T
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat 175  Q
    ||| |||||||| |||||||||||||||||  ||||||||||||||| |||||| ||||||    
T  17811446 ttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaat 17811386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 4 - 208
Target Start/End: Original strand, 20570804 - 20571002
Alignment:
Q  4 gatggacatcaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaa 103  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  20570804 gatggactttaccaaaaaagaataatactaaatatatgttataaatggtatatagtcataaatgacttattttataagaaatcgtaaaattgcaatcaaa 20570903  T
Q  104 attgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggatt 203  Q
    || ||||||||||| |||||||   |||||||||| |||||||||      || ||||||||||| ||||||  || |||| || ||||||||||||| |    
T  20570904 atcgatggattttgtctatttttagattctactatagatttaggt------agatgaagaaagtcacaaaatcttggatttcagaatttaagtcgggagt 20570997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 26617407 - 26617605
Alignment:
Q  16 caaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    ||||||| |||||||||||||||||||||||||||    |||||||||||||||||||| || ||||  ||||||||||||||||||||| ||| |||||    
T  26617407 caaaaaaaaataatactaaatatatgttataaatg----atagtcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattt 26617502  T
Q  116 tgcc--tattttagaattctac--tatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaac 211  Q
    ||||  ||||||||||||||||  |||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||| ||||| | ||||| | |||    
T  26617503 tgcctatattttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaac 26617602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 52 - 214
Target Start/End: Original strand, 22687631 - 22687793
Alignment:
Q  52 tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgt 151  Q
    ||||||||||| || |  ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| | ||||||||  || ||    
T  22687631 tatatagtcatcaaggttttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgt 22687730  T
Q  152 tgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  22687731 tgaagttgaagaaagtcgcaaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 9685220 - 9685373
Alignment:
Q  61 ataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtga 160  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||  ||||||| |||||||||  ||||||||||||||    
T  9685220 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtga 9685319  T
Q  161 agaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    | ||||||||||||| || ||||||||||| ||||||| |||||||||||||||    
T  9685320 aaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaat 9685373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 7730319 - 7730471
Alignment:
Q  61 ataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtga 160  Q
    |||||||| ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||  || ||| |||||||    
T  7730319 ataaatgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtga 7730418  T
Q  161 agaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||    
T  7730419 agaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaat 7730471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 11326524 - 11326386
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat 175  Q
    |||| ||||| ||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||  |||| ||||||||||||||||||||||||    
T  11326524 tataggaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaat 11326425  T
Q  176 tctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     || ||||||||||||||||| |||||||||||||||||    
T  11326424 cctaaattttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 56 - 194
Target Start/End: Original strand, 27509914 - 27510052
Alignment:
Q  56 tagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaa 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||   |||||| |    
T  27509914 tagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttgga 27510013  T
Q  156 ggtgaagaaagtcgcaaaattctgaattttaggatttaa 194  Q
     ||||||||| ||||||||| ||  ||||||| ||||||    
T  27510014 tgtgaagaaaatcgcaaaatcctttattttagaatttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 214
Target Start/End: Complemental strand, 39182397 - 39182260
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat 175  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||||||| | ||||||||||||||||  |||||||||||||||| ||||||||||||    
T  39182397 tataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaat 39182299  T
Q  176 tctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     ||  ||||||||||||||||| |||||||| |||||||    
T  39182298 cctagattttaggatttaagtcaggattttgtcaacaat 39182260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 92 - 214
Target Start/End: Original strand, 21846433 - 21846554
Alignment:
Q  92 atcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatt 191  Q
    |||||||||||||| ||| |||||| ||| ||||||||||||||||||||| |  ||||||||| ||||| ||||||||||||| ||||||||||| |||    
T  21846433 atcgcaatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatt 21846531  T
Q  192 taagtcgggattttgacaacaat 214  Q
    |||||||||||||||||||||||    
T  21846532 taagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 8571367 - 8571250
Alignment:
Q  90 aaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttagga 189  Q
    |||||||||||||||| ||||| ||||  ||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||| ||| |||||| ||    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  190 tttaagtcgggattttga 207  Q
    ||||||||||||||||||    
T  8571267 tttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 32 - 214
Target Start/End: Complemental strand, 6916961 - 6916786
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaatt 131  Q
    |||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||  |  ||||||||||    
T  6916961 taaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaaccgatggattttaac--ttttagaatt 6916865  T
Q  132 ctactatggatttaggtcgttgaaggtg-aagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||| ||||  |||     ||||| || ||| ||||||||| || ||||| | ||||||| |||||||||||||||||||    
T  6916864 ctactatgaatttgagtc-----aggtgaaaaaaaatcgcaaaatcctaaatttcaagatttaaatcgggattttgacaacaat 6916786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 1977790 - 1977692
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaa 174  Q
    ||||||||||| |||||||||||||||||| || | ||||||| |||||||| ||||||||||||||||  ||||||||||||| | ||| ||||||||    
T  1977790 tataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtggaaaaaatcgcaaaa 1977692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 21846385 - 21846433
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgactta 72  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  21846385 aataatattaaatatatgttataaatgatatatagtcataaatgactta 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 4574537 - 4574475
Alignment:
Q  148 tcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||||  |||||| ||||    
T  4574537 tcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtcatgattttcacaa 4574475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 30294236 - 30294174
Alignment:
Q  153 gaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatt 215  Q
    ||||||||| ||| || |||||| ||| |||||||||||||||| ||||||||||||||||||    
T  30294236 gaaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaacaatt 30294174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 7730247 - 7730287
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  7730247 tataagaaattgtaaaatcgcaatcaaaattgatggatttt 7730287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 21846335 - 21846375
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  21846335 tataagaaatcgtaaaatcacaatcaaaattgatggatttt 21846375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 1981275 - 1981321
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||    
T  1981275 aataatgctaaatatatgttataaattgcatatagtcataaatgact 1981321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 4247597 - 4247552
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgccta 121  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||    
T  4247597 tataagaaatcataaaatcgcaatcaaaatcgatggattttaccta 4247552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 8630002 - 8630087
Alignment:
Q  129 attctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||||||||  |||||||||| | |  ||||| ||||||| ||  ||||| ||| |||||||| |||||||||||||||    
T  8630002 attctactatggatttgagtcgttgaagttaagtaaagttgcaaaatcctagattttgggacttaagtcgcgattttgacaacaat 8630087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 17809067 - 17809119
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgacttagttt 76  Q
    |||||| ||||||||||||||||||| | ||||| |||||||||||| |||||    
T  17809067 aataatgctaaatatatgttataaattgcatataatcataaatgactcagttt 17809119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 21157625 - 21157669
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||| ||||||||||||||||||||||||||| || |||||||||    
T  21157625 taatgctaaatatatgttataaatggtatataatcgtaaatgact 21157669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 21157811 - 21157903
Alignment:
Q  122 ttttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||| ||| | ||||||||||  ||||||| | ||||  ||||||||||||  |||||||||| |||||||||| | |||| |||||||||    
T  21157811 ttttaggattttgctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaatttcgacaacaat 21157903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 26565436 - 26565476
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  26565436 tataaaaaatcgtaaaattgcaatcaaaattgatggatttt 26565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 119
Target Start/End: Original strand, 26281219 - 26281254
Alignment:
Q  84 atcgtaaaatcgcaatcaaaattgatggattttgcc 119  Q
    ||||||||||||||||||||||||| ||||||||||    
T  26281219 atcgtaaaatcgcaatcaaaattgaaggattttgcc 26281254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 26565497 - 26565540
Alignment:
Q  34 aatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    |||||||||||||||  |||||||||||||||||||| ||||||    
T  26565497 aatatatgttataaactgtatatagtcataaatgactcagttta 26565540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 27509344 - 27509379
Alignment:
Q  18 aaaaataataatactaaatatatgttataaatggta 53  Q
    ||||| ||||||||||||||||||||||||||||||    
T  27509344 aaaaaaaataatactaaatatatgttataaatggta 27509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 25842691 - 25842729
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  25842691 taaatatatgttataaattgcatatagtcataaatgact 25842729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 26565691 - 26565757
Alignment:
Q  148 tcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||| || ||||| |||||  ||||||||||||||||| |||||||| | | ||||||||||||||    
T  26565691 tcgttaaaagtgaataaagttacaaaattctgaattttatgatttaaggcagaattttgacaacaat 26565757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Original strand, 8329867 - 8329896
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaat 105  Q
    ||||||||||||||||||||||||||||||    
T  8329867 tataagaaatcgtaaaatcgcaatcaaaat 8329896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 17809440 - 17809493
Alignment:
Q  152 tgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggatttt 205  Q
    |||||||||  |||||| |||||| ||||||||| |||||||||||| ||||||    
T  17809440 tgaaggtgagtaaagtcacaaaatcctgaattttgggatttaagtcgcgatttt 17809493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 8329932 - 8329972
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||||||||||| |||||||||||  |||||||||    
T  8329932 tataagaaatcgtaaaattgcaatcaaaatcaatggatttt 8329972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 24725360 - 24725400
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  24725360 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 24725400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 9e-86; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 13276195 - 13276395
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||    
T  13276195 accaaaaaataataatactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgat 13276294  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||    
T  13276295 tttgcctattttaggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaa 13276394  T
Q  214 t 214  Q
    |    
T  13276395 t 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 9954967 - 9955164
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  9954967 aaaaaataataatactgaatatatgttataaatggtatatagtcataaatgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9955066  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    || |||||| | |||||||  |||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  9955067 gcttattttgggattctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaat 9955164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 16125374 - 16125580
Alignment:
Q  4 gatggacatcaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaa 103  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  16125374 gatggacgttacccaaaaataataatactaaatatatgttataaatggtatatattcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaa 16125473  T
Q  104 attgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtg---aagaaagtcgcaaaattctgaattttaggatttaagtcggg 200  Q
    ||  |||||||||||||||||||  ||| |||||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||| ||    
T  16125474 atcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcctgaattttaggatttaagtcagg 16125573  T
Q  201 attttga 207  Q
    |||||||    
T  16125574 attttga 16125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 21 - 215
Target Start/End: Complemental strand, 23528849 - 23528655
Alignment:
Q  21 aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcct 120  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  23528849 aataataataataaatatacgttataaatggtatatagtcataaatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattttgcct 23528750  T
Q  121 attttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatt 215  Q
    ||||||| ||||||||||||||||  |||||||||| |||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  23528749 attttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaatt 23528655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 37 - 212
Target Start/End: Original strand, 19009898 - 19010073
Alignment:
Q  37 atatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctact 136  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||    
T  19009898 atatgttataaatggtatatagttataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttact 19009997  T
Q  137 atggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    ||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  19009998 atggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 42180005 - 42180193
Alignment:
Q  25 ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattt 124  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||| |||||||||||||    
T  42180005 ataatactatatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctattt 42180104  T
Q  125 tagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |  |||||||||||||||||   |||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  42180105 tgaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 28 - 214
Target Start/End: Original strand, 25146712 - 25146897
Alignment:
Q  28 atactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttag 127  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||| | |||| ||||||| |    
T  25146712 atactaaatatacgttataaattgtatatagtcataaataacttagtttataagaaatcgtaaa-tcgcaattaaaattgatgtactttgtctattttgg 25146810  T
Q  128 aattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25146811 gattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaat 25146897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 9352004 - 9352192
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| || |||||||| |||||||    
T  9352004 taatactaaatatatgttataaatggtatatagtcaaaaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctatttt 9352103  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     | | ||| |||| |||||  ||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  9352104 gggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaat 9352192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 15 - 210
Target Start/End: Complemental strand, 13100388 - 13100195
Alignment:
Q  15 ccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||||||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||    
T  13100388 ccaaaaaataa--atactaaatatatgttacaaatggtatatagtcataaatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggttt 13100291  T
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    ||||||||||||| ||||||||||||||||  ||||||||| ||||||||||||| ||||| ||  ||||||| |||||||| |||||||||||||    
T  13100290 ttgcctattttaggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaa 13100195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 18304742 - 18304940
Alignment:
Q  16 caaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    ||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  18304742 caaaaaaaattaatactaaatatacgttatgaatggtatatagtcataaatgacttagcttataagaaatcgt-aaatcgcaatcaaaattgatggattt 18304840  T
Q  116 tgcctattttagaattctactatggatttaggtcg-ttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    || |||||||   ||||||||||| ||||  |||| ||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  18304841 tgtctattttgagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaat 18304940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 9327147 - 9327344
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaa--tgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||||||||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9327147 aaaaaaataatactaaatatatattataaatggtatatagtcaaaaaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 9327246  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    | ||||||| | ||| |||||| |||||  ||||||||||||| ||||||||||||||  || |||||||||||||||||| ||||||| ||||||||    
T  9327247 gtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagtcaggattttaacaacaat 9327344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 37 - 212
Target Start/End: Complemental strand, 12513458 - 12513283
Alignment:
Q  37 atatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctact 136  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||  ||| ||||    
T  12513458 atatgttatatatggtatatagtcgtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttact 12513359  T
Q  137 atggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    ||||||||  |||||||||| |||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||    
T  12513358 atggatttgagtcgttgaagctgaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 14 - 213
Target Start/End: Original strand, 17869679 - 17869873
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    |||||||||||||||||||||||||||||| ||||| |||||| || ||||| ||||||||||| ||||||||||||||| ||||||||||| || | ||    
T  17869679 accaaaaaataataatactaaatatatgttgtaaatagtatatggttataaaagacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaat 17869778  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |     |||| |||||||||| |||||||||||||||    
T  17869779 tttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaagaaagtcgcaaaatcc-----tttaagatttaagtcaggattttgacaacaa 17869873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 214
Target Start/End: Original strand, 9128776 - 9128969
Alignment:
Q  21 aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcct 120  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||| |||||| ||    
T  9128776 aataataatactaaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgtcaaatcgcaatcaaaatcgatgaattttgtct 9128875  T
Q  121 attttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||  ||||||||||  ||||  |||||| || |||||||||||||||| || || | ||||||||||||||||| |||||| ||||||||    
T  9128876 attttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 76 - 214
Target Start/End: Original strand, 41032661 - 41032799
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat 175  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  41032661 tataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaat 41032760  T
Q  176 tctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     ||||||| || ||||||||||| |||||||||||||||    
T  41032761 cctgaattctacgatttaagtcgagattttgacaacaat 41032799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 214
Target Start/End: Original strand, 21846215 - 21846397
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    ||||||||||||||||||||||||  |||||||| |||||||||   |||||| | ||||   ||||||||||||||||| ||||||||||  |||||||    
T  21846215 taatactaaatatatgttataaattatatatagttataaatgac---gtttatgaaaaat---aaaatcgcaatcaaaatcgatggattttttctatttt 21846308  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
       ||||||||||||||||  ||||||||||||||| ||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  21846309 gagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttaggatttaactcgggattttgacaacaat 21846397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 27 - 126
Target Start/End: Complemental strand, 32881514 - 32881415
Alignment:
Q  27 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 126  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  32881514 aatactaaatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttta 32881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 47786049 - 47785958
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  47786049 aataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaattgcaatcaaaaccgatggattt 47785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 34 - 137
Target Start/End: Complemental strand, 18228380 - 18228278
Alignment:
Q  34 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattct 133  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattct 18228282  T
Q  134 acta 137  Q
    ||||    
T  18228281 acta 18228278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 17055995 - 17056128
Alignment:
Q  81 gaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctga 180  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||| |  ||||||||||||| ||||| | ||||||| |||     
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgg 17056094  T
Q  181 attttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||||||| || |||||||||| |||||    
T  17056095 attttaggatttaaatcaggattttgactacaat 17056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 30619142 - 30619075
Alignment:
Q  147 gtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  30619142 gtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 14074404 - 14074501
Alignment:
Q  119 ctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatta 216  Q
    ||||||||  |||||||| |||||||  |||||||||  |||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaatta 14074501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 18337547 - 18337650
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    |||||||||||||||| |  |||| ||||||||||  ||||||||||||||| ||||| ||||||| ||| |||||||| | ||||||||||||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttagg-tataagtcgggattttgaca 18337645  T
Q  210 acaat 214  Q
    |||||    
T  18337646 acaat 18337650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 12800629 - 12800710
Alignment:
Q  133 tactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||| |||||  ||||||||| ||||||||||||| ||||| || ||||||||||||||||| |||||||| ||||||||    
T  12800629 tactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 214
Target Start/End: Original strand, 34478833 - 34478899
Alignment:
Q  148 tcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||||||||||||| |||||| |  ||||||| |||||||||||||||||| ||||||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaat 34478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 12002811 - 12002859
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgactta 72  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  12002811 aataatgctaaatatatgttataaattgcatatagtcataaatgactta 12002859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 27917496 - 27917578
Alignment:
Q  129 attctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaac 211  Q
    ||||| ||||| |||| ||| ||||||||| || ||| ||||||||| ||  |||| || |||||||||||||||||||||||    
T  27917496 attctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgacaac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 47785837 - 47785792
Alignment:
Q  169 gcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||    
T  47785837 gcaaaatcctgaattttaggatttatgttgggattttgacaacaat 47785792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Complemental strand, 8772755 - 8772715
Alignment:
Q  163 aaagtcgcaaaattctgaattttaggatttaagtcgggatt 203  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  8772755 aaagtcgcaaaattctggattttgggatttaagtcgggatt 8772715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 13100431 - 13100391
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  13100431 tataagaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 16446699 - 16446750
Alignment:
Q  25 ataatactaaatatatgttataaatggtatatagtcataaatgacttagttt 76  Q
    ||||||||||||||||||||||||| | ||||| ||||| |||||| |||||    
T  16446699 ataatactaaatatatgttataaattgcatataatcatatatgactcagttt 16446750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 27917310 - 27917363
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    |||||| | |||||||| |||||||| |||||||||||||||| ||| ||||||    
T  27917310 aataatgcaaaatatatattataaatcgtatatagtcataaataactcagttta 27917363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 16125343 - 16125379
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatgga 112  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  16125343 tataagaaattgtaaaatcgcaatcaaaatcgatgga 16125379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 18304699 - 18304739
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  18304699 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 18304739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 21846162 - 21846202
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||| ||||||||||||||||||| |||| |||||    
T  21846162 tataagaaattgtaaaatcgcaatcaaaatagatgaatttt 21846202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 23528897 - 23528857
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  23528897 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 23528857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 156; Significance: 8e-83; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 4 - 214
Target Start/End: Original strand, 9911330 - 9911541
Alignment:
Q  4 gatggacatcaccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaa 103  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9911330 gatggactttaccaaaaaataataatacttaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaa 9911429  T
Q  104 attgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttagga-tttaagtcgggat 202  Q
    || ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||  |||||||||||| ||||| |||||||    
T  9911430 atcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaaagttgcaaaatcttgaattttaggattttaaatcgggat 9911529  T
Q  203 tttgacaacaat 214  Q
    || |||||||||    
T  9911530 ttagacaacaat 9911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 5361905 - 5362092
Alignment:
Q  27 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 126  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||     
T  5361905 aatactaaatatatgttaaaaatggtatataatcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttg 5362004  T
Q  127 gaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||||||||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5362005 gaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 36121020 - 36120824
Alignment:
Q  18 aaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttg 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  36121020 aaaaataataatactaaatatattttataaatggtatatagtcataaatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttg 36120921  T
Q  118 cctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    | |||||||||||| || |||||||||| ||||||||||||||||||| ||||||||| || |||||||  |||||| |||| ||||||||||||||    
T  36120920 cttattttagaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaat 36120824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 9770300 - 9770112
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  9770300 taatactaaatatatgttatgaatggtatatagtcataagtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctatttt 9770201  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    || ||||||||||||||||  ||||||||||||||| |||||| |||||| ||  ||||||| |||||||||| |||||| ||||||||    
T  9770200 aggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 212
Target Start/End: Complemental strand, 5375863 - 5375666
Alignment:
Q  15 ccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||| |||    
T  5375863 ccaaaaaaaattaatactaaatatatgttataaatgatatatggtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaatt 5375764  T
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    ||| |||||||| ||||||| |||| ||||  |||||||||||||||||||||||||||||  | |||||||| ||||| || |||||||||||||||    
T  5375763 ttgtctattttaaaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 13023767 - 13023567
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  13023767 aaaaaaaattaatactaaatatatgttataaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgatttt 13023668  T
Q  117 gccta--ttttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaa-ttttaggatttaagtcgggattttgacaacaa 213  Q
      |||  |||| | ||||||||||||||||  ||| ||||||||||||||||||||||||| || || ||||||||||||||| ||||||||||||||||    
T  13023667 atctattttttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaa 13023568  T
Q  214 t 214  Q
    |    
T  13023567 t 13023567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 27 - 214
Target Start/End: Complemental strand, 8889415 - 8889228
Alignment:
Q  27 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 126  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||     
T  8889415 aatactaaatatatattataaatggtatatagtcataaacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttg 8889316  T
Q  127 gaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    | |||||| |||| ||||  |||||||| |||||||||| || |||||| ||| ||||||||||||||||||||||||||||| ||||    
T  8889315 ggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaat 8889228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 17466274 - 17466080
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgc 118  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  17466274 aaaaaaataatattaaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggattttgc 17466175  T
Q  119 ctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
     |||||||| |||||| |||||||||  ||| || ||| |||||||| ||||||||| || ||||||| ||||||||| || |||||||||||||    
T  17466174 ttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 10143096 - 10142899
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||    
T  10143096 aaaaaaaaataatactaaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggatttt 10142997  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    | ||||||| ||||| ||||||||| ||  ||| ||||||||| |||||||||||||||  | |||||||| ||||||||||||||||| ||||||||    
T  10142996 gtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaat 10142899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 23064890 - 23065092
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgactta--gtttataagaaatcgtaaaatcgcaatcaaaattgatgg 111  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||  ||||||||||||||||||||| ||||| ||||| |||||    
T  23064890 accaaaaaataataatactaaatatatgttataaatgatatagggtcataaatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatgg 23064989  T
Q  112 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaac 211  Q
    ||||  |||||||||||||||||| ||||||||  ||||||||| |||||||||||  |||||| ||| ||||||| |||||||||||| |||| |||||    
T  23064990 atttgacctattttagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactggattttagaatttaagtcggggttttaacaac 23065089  T
Q  212 aat 214  Q
    |||    
T  23065090 aat 23065092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 37240455 - 37240262
Alignment:
Q  16 caaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||     
T  37240455 caaaatataataatactaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaatta 37240356  T
Q  116 tgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||| |  |||||||||||||||  ||||||||||||||| ||||||| ||    || ||||||||||||||||| |||||||| ||||||||    
T  37240355 tgcctatttt-gggttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaat 37240262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 13551598 - 13551751
Alignment:
Q  61 ataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtga 160  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||  ||||||| |||||||||  ||||||||||||||    
T  13551598 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtga 13551697  T
Q  161 agaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    | ||||||||||||| || ||||||||||| ||||||| |||||||||||||||    
T  13551698 aaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaat 13551751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 8011212 - 8011347
Alignment:
Q  81 gaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctga 180  Q
    ||||||| ||||||||||||||||| |||| |||||||  ||||| | ||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  8011212 gaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 8011311  T
Q  181 attttaggatttaagtcgggattttgacaacaatta 216  Q
    |||||||||||| ||| |||||||||||||||||||    
T  8011312 attttaggatttgagttgggattttgacaacaatta 8011347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 7044831 - 7044728
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    ||||||||| |||||| | ||||| ||||||||||  ||||||||||||||| ||||| |||||||  || |||||||||||||||||||||||||||||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  210 acaa 213  Q
    ||||    
T  7044731 acaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 7452523 - 7452420
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    ||||||||||||| |||| | || |||||||||| || |||||||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggattgag-tcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  210 acaat 214  Q
    |||||    
T  7452424 acaat 7452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 18459733 - 18459837
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    |||||||||||||||||| ||||| ||||||||||  ||||||||| ||||| | |||||||||||  || |||||||||||| |||||||||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  210 acaat 214  Q
    |||||    
T  18459833 acaat 18459837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 121 - 214
Target Start/End: Complemental strand, 24719610 - 24719517
Alignment:
Q  121 attttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||| ||||| ||||||||||  ||||||||||||||| |||||||||||||  |||||||||| | |||||||| |||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaat 24719517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 111 - 214
Target Start/End: Complemental strand, 4156866 - 4156763
Alignment:
Q  111 gattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    |||||||| |||||||| |||||||||  |||||  |||||| |||||||| ||||||  ||||| || ||||||| |||||||||||||||||||||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  211 caat 214  Q
    ||||    
T  4156766 caat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 110 - 210
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    |||||||||||||||| | |||||||||||| |||  |||| | ||| |||| |||||| |||||| ||| ||||||||||||||||||||||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  210 a 210  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Original strand, 6347114 - 6347189
Alignment:
Q  135 ctatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    ||||||||||  |||||||||||| || ||||| ||||||| ||| |||||||||||||||| || ||||||||||    
T  6347114 ctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaa 6347189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 9149813 - 9149864
Alignment:
Q  163 aaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  9149813 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 46664421 - 46664486
Alignment:
Q  149 cgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||| |||| |||||||||||||||||||||||| ||||||||| |  ||||||||| ||||    
T  46664421 cgttgaagatgaacaaagtcgcaaaattctgaattttaagatttaagttgaaattttgacagcaat 46664486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 5846058 - 5846104
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||    
T  5846058 aataatgctaaatatatgttataaattgtatattgtcataaatgact 5846104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Original strand, 9149663 - 9149709
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  9149663 aataatgctaaatatatgttataaattgtatatagttataaatgact 9149709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 4157090 - 4157053
Alignment:
Q  79 aagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 7825239 - 7825186
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    |||||| ||||||| | ||||||||| |||||||||||||||||||| ||||||    
T  7825239 aataatgctaaatacaagttataaattgtatatagtcataaatgactcagttta 7825186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 8011076 - 8011129
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    |||||| ||||||||||||||||||| ||||||| | |||||||| ||||||||    
T  8011076 aataatgctaaatatatgttataaattgtatataattataaatgaattagttta 8011129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 10394614 - 10394565
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtg 159  Q
    |||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  10394614 ggatcttgcctattttaaaattctactatgaatttaagtcgttgaaggtg 10394565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 10143141 - 10143101
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  10143141 tataagagattgtaaaatcgcaatcaaaattgatggatttt 10143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 6346843 - 6346882
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  6346843 tataagaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 8409771 - 8409725
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| |||||||||||||||||||   ||||||||||||||||||    
T  8409771 aataatgctaaatatatgttataaattacatatagtcataaatgact 8409725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 18403710 - 18403672
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  18403710 taaatatatgttataaattgtatatagtcatgaatgact 18403672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 66
Target Start/End: Complemental strand, 24719756 - 24719722
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaat 66  Q
    |||||||||||||||||| ||||||||||||||||    
T  24719756 taaatatatgttataaattgtatatagtcataaat 24719722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 110
Target Start/End: Complemental strand, 24719816 - 24719782
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatg 110  Q
    |||||||||||||||||||||||||||||| ||||    
T  24719816 tataagaaatcgtaaaatcgcaatcaaaatcgatg 24719782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 55476165 - 55476119
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| | ||||||||||||||||| | ||||||||||||||||||    
T  55476165 aataatgcaaaatatatgttataaattgcatatagtcataaatgact 55476119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 7045123 - 7045078
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    |||||||||||||||| | ||||||||| |||||||||| ||||||    
T  7045123 taaatatatgttataatttgtatatagtgataaatgactcagttta 7045078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 610683 - 610719
Alignment:
Q  178 tgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||| |||||||| |||||||||||||||||    
T  610683 tgaattttagtatttaagttgggattttgacaacaat 610719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 7045004 - 7044964
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||||  |||||||||| ||||||||||    
T  7045004 tataagaaatcgtaaaatatcaatcaaaatcgatggatttt 7044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 7815819 - 7815783
Alignment:
Q  41 gttataaatggtatatagtcataaatgacttagttta 77  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  7815819 gttataaattgtatatagtcataaatgactcagttta 7815783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 8011024 - 8011064
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||| ||||||||||||||||||| |||| |||||    
T  8011024 tataagaaattgtaaaatcgcaatcaaaatcgatgtatttt 8011064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 8744087 - 8744131
Alignment:
Q  170 caaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||| ||||||||| ||||||||||||| |||| |||||||||    
T  8744087 caaaatcctgaatttttggatttaagtcggaatttcgacaacaat 8744131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 9911299 - 9911335
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatgga 112  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  9911299 tataagaaattgtaaaatcgcaatcaaaatcgatgga 9911335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 17466320 - 17466280
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||| ||||||| ||||||||||| ||||||||||    
T  17466320 tataagaaattgtaaaattgcaatcaaaatcgatggatttt 17466280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 36121064 - 36121024
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  36121064 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 36121024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 3e-79; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 15528051 - 15528240
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  15528051 taatactaaatatatgttataaatggtatatagttataaatgacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctatttt 15528150  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatt 215  Q
    |  ||||||||||| ||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15528151 aagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaatt 15528240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 23898011 - 23897823
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23898011 accaaaaaaaaaaaatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggat 23897912  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggat 202  Q
    || ||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  23897911 ttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgcattttaggatttaagtcgggat 23897823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 17543672 - 17543869
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  || ||||||    
T  17543672 aaaaaataataatactaaatatatgttataaatggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagatttt 17543771  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    || |||||||  ||||||||||||||||  ||||||||| ||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  17543772 gcttattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaat 17543869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 26053225 - 26053425
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  26053225 accaaaaaataataatactaactatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggat 26053324  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||||| |||||| | |||||| |||| ||||  ||| ||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||    
T  26053325 tttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaa 26053424  T
Q  214 t 214  Q
    |    
T  26053425 t 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 26073278 - 26073478
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  26073278 accaaaaaataataatactaactatatgttataaatggtatatagtcataaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggat 26073377  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||||| |||||| | |||||| |||| ||||  ||| ||||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||    
T  26073378 tttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaa 26073477  T
Q  214 t 214  Q
    |    
T  26073478 t 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 30912341 - 30912541
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    |||| |||| ||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  30912341 accacaaaaaaataatactaaatatatgtgataaatgatatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggat 30912440  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||||||||||||   |||||| |||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||    
T  30912441 tttgcctattttgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaa 30912540  T
Q  214 t 214  Q
    |    
T  30912541 t 30912541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 34 - 214
Target Start/End: Complemental strand, 7223692 - 7223519
Alignment:
Q  34 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattct 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  7223692 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattct 7223593  T
Q  134 actatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||||| |       ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  7223592 actatggatttaag-------aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaat 7223519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 17250256 - 17250057
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||| |||| || ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||    
T  17250256 accaaaaaacaatagtaataaatatatattataaatt-tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaat 17250158  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||| |||||||    
T  17250157 tttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctggattttaggatttaagtcgggattttaacaacaa 17250058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 19748533 - 19748333
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| ||    
T  19748533 accagaaaataataatactaaatatattttataaatgatatatagtcttaaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaat 19748434  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||||||||||||  ||||||||| ||||||  ||| || |||||||||||| || |||||| ||| ||| || |||||||||||||||||||| |||||    
T  19748433 tttgcctattttaagattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctggattgtaagatttaagtcgggattttgaaaacaa 19748334  T
Q  214 t 214  Q
    |    
T  19748333 t 19748333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 42 - 214
Target Start/End: Original strand, 7918338 - 7918510
Alignment:
Q  42 ttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatgga 141  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||| |||||||||| ||| |||||||| ||| |||| ||| |||||||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatgga 7918437  T
Q  142 tttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  7918438 tttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 21354928 - 21354748
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||    
T  21354928 taatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattttgtctatttt 21354829  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     | ||||||| ||||||||| |||||||||||| |||||||||        | | |||||||||||||||| |||||||||||||||||    
T  21354828 gggattctaccatggatttaagtcgttgaaggtaaagaaagtc--------caggattttaggatttaagttgggattttgacaacaat 21354748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 32 - 214
Target Start/End: Original strand, 11327518 - 11327700
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaatt 131  Q
    |||||| |||| |||||||||||| |||||||||||| |||||| |||||||| |||||||||||||| ||||| |||| |||||||||||||| | |||    
T  11327518 taaatacatgtgataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggatt 11327617  T
Q  132 ctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||||||| ||| |||||| ||||||||  |||||||   || |||||||| |||||||||||||||||||||||||    
T  11327618 ctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaat 11327700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 17103383 - 17103202
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    ||||| ||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  17103383 taataataaatatatgtcataaatgatatatagtcgtaaataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctatttt 17103284  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     | ||||||||||| ||||  ||||||||| ||       |||||||||| |||||||||| |||||||||||||||||||||||||||    
T  17103283 gggattctactatgcatttgagtcgttgaaagt-------gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaat 17103202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 10508954 - 10509148
Alignment:
Q  21 aataataatactaaatatatgttataaatg------gtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||||| |||||||||||||||||||      ||||||||| |||||||||||||||||||| || ||||||||||| ||||||||| |||| |||    
T  10508954 aataataataataaatatatgttataaatgacttaggtatatagt-ataaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaatt 10509052  T
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    ||||||||||| | ||||||||||  ||||  ||| ||||| |||||||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  10509053 ttgcctattttgggattctactataaatttgagtcattgaatgtgaagaaagtcacaaatttctgaattttaggatttaagtctggattttgacaa 10509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 76 - 214
Target Start/End: Original strand, 27233268 - 27233406
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat 175  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||||    
T  27233268 tataagaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaat 27233367  T
Q  176 tctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     ||| ||||||||||||||||||| | ||||||||||||    
T  27233368 cctggattttaggatttaagtcggtagtttgacaacaat 27233406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 43 - 206
Target Start/End: Original strand, 22498843 - 22499006
Alignment:
Q  43 tataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggat 142  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||   ||| ||||||||||    
T  22498843 tatagatggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggat 22498942  T
Q  143 ttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttg 206  Q
    ||  |||||| ||||||||||||||||||||||| || | |||||||||| ||| |||||||||    
T  22498943 ttgagtcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 6943464 - 6943589
Alignment:
Q  89 aaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttagg 188  Q
    ||||||||||||||||| |||| |||||| |||||||   |||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  189 atttaagtcgggattttgacaacaat 214  Q
    ||||||||||||||||||||||||||    
T  6943564 atttaagtcgggattttgacaacaat 6943589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 2912218 - 2912373
Alignment:
Q  55 atagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttga 154  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||| ||||||| |||||||  |||||||||| |||||   |||||||    
T  2912218 atagtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttga 2912316  T
Q  155 aggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaac 211  Q
    || || ||||||| ||||||| || ||||||| ||||||||||||||||||||||||    
T  2912317 agatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 18491081 - 18491166
Alignment:
Q  129 attctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||| ||||||||||  ||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  18491081 attctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacagcaat 18491166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  137 atggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    ||||||||  |||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 214
Target Start/End: Original strand, 5422810 - 5422877
Alignment:
Q  147 gtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||||||| ||||| |||||||  |||||||||| ||||||||||||||||||||||||||    
T  5422810 gtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaat 5422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 7918282 - 7918343
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataa 80  Q
    |||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||    
T  7918282 aaaaaaataatactaaatttatgttataaatgatatatagtcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 27614594 - 27614651
Alignment:
Q  37 atatgttataaatggtatatagtcataaatgact--tagtttataagaaatcgtaaaa 92  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  27614594 atatgttataaatggtatatagtcataaatgaattatagtttataagaaatcgtaaaa 27614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 645466 - 645417
Alignment:
Q  21 aataataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    ||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  645466 aataataatgctaaatatatgttataaattgcatatagtcataaatgact 645417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 10508905 - 10508945
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  10508905 tataagaaattgtaaaatcgcaatcaaaattgatggatttt 10508945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 4841946 - 4842026
Alignment:
Q  112 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaa 194  Q
    |||||||||||| | | ||||| ||| ||||||  ||||||||||||||| ||||||||||||| |  |||||||||||||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtcgcaaaatcc--aattttaggatttaa 4842026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 10958253 - 10958316
Alignment:
Q  151 ttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||   |||||||||||| |||||||||  ||||||||||| |||||||||||||||    
T  10958253 ttgaaggtgagtcaagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaat 10958316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 27233228 - 27233271
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatata 57  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  27233228 accataaaacaataatactaaatatatgttataaatggtatata 27233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 5422599 - 5422644
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgac 69  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||    
T  5422599 aataatgctaaatatatgttataaattatatatagtcataaatgac 5422644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 8545030 - 8545087
Alignment:
Q  150 gttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttga 207  Q
    |||||| ||||  ||||||||||||| || ||||||||||||||| ||||||||||||    
T  8545030 gttgaaagtgagtaaagtcgcaaaatcctaaattttaggatttaaatcgggattttga 8545087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 27890563 - 27890519
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatga 68  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||    
T  27890563 aataatgctaaatatatgttataaattgcatatagtcataaatga 27890519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 77 - 116
Target Start/End: Original strand, 4841718 - 4841757
Alignment:
Q  77 ataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  4841718 ataagaaatcgtaaaatcgcaatcaaaatcgatgtatttt 4841757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 12245171 - 12245109
Alignment:
Q  152 tgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||| ||||| ||||||||||||| |||||||||| ||||||| ||  |||||| ||||||||    
T  12245171 tgaaagtgaataaagtcgcaaaatactgaattttaagatttaaatcatgattttaacaacaat 12245109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 2912148 - 2912189
Alignment:
Q  75 ttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  2912148 ttataagaaattgtaaaatcgcaatcaaaatcgacggatttt 2912189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 17103436 - 17103391
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgccta 121  Q
    |||| ||||| ||||||||||||||||||| |||||||||| ||||    
T  17103436 tataggaaattgtaaaatcgcaatcaaaatcgatggattttaccta 17103391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 18490536 - 18490565
Alignment:
Q  85 tcgtaaaatcgcaatcaaaattgatggatt 114  Q
    ||||||||||||||||||||||||||||||    
T  18490536 tcgtaaaatcgcaatcaaaattgatggatt 18490565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 187
Target Start/End: Original strand, 18490998 - 18491063
Alignment:
Q  122 ttttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttag 187  Q
    |||||| ||||| ||||||||||  ||| ||||||||||| ||||| ||||||| ||| |||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttag 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 7359915 - 7359848
Alignment:
Q  147 gtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatt 215  Q
    ||||||||||||||| |||||||| ||||  | |||||||||| |||| |||  |||||||||||||||    
T  7359915 gtcgttgaaggtgaataaagtcgctaaatcttaaattttagga-ttaaatcgaaattttgacaacaatt 7359848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 7918238 - 7918278
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  7918238 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 7918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 19748574 - 19748534
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  19748574 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 19748534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 22498328 - 22498368
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  22498328 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 22498368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 11879800 - 11879600
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||    
T  11879800 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaat 11879701  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||| |||||||||| |||||||||| |||||  ||||||||| ||||||||||| ||||||| ||||||||||||||||||||| | |||||||||||||    
T  11879700 ttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaa 11879601  T
Q  214 t 214  Q
    |    
T  11879600 t 11879600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 11897216 - 11897016
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||    
T  11897216 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaat 11897117  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||| |||||||||| |||||||||| |||||  ||||||||| ||||||||||| ||||||| ||||||||||||||||||||| | |||||||||||||    
T  11897116 ttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaa 11897017  T
Q  214 t 214  Q
    |    
T  11897016 t 11897016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 15294865 - 15294672
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgc 118  Q
    |||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  15294865 aaaaaaataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgc 15294766  T
Q  119 ctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    ||||||| | |||||||||| |||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  15294765 ctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 15475234 - 15475041
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgc 118  Q
    |||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  15475234 aaaaaaataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgc 15475135  T
Q  119 ctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    ||||||| | |||||||||| |||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  15475134 ctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 5922237 - 5922049
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 125  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||||| |||||||    
T  5922237 taatactaaatatatgttatgaatggtatatagtcataaatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctatttt 5922138  T
Q  126 agaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     | |||||||||||||| || |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  5922137 gggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaat 5922049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 17 - 210
Target Start/End: Complemental strand, 31424360 - 31424167
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  31424360 aaaaaaaaaaaatactaaatatatgttataattggtatatagtcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggatttt 31424261  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    ||||||||| | ||||| ||||||||||  ||||||||| | ||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  31424260 gcctattttgggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaa 31424167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 30 - 212
Target Start/End: Original strand, 19704400 - 19704583
Alignment:
Q  30 actaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaa 129  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| | |||    
T  19704400 actaaatatatgttacaaatggtatatagtcataaataacttggtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaa 19704499  T
Q  130 ttctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattc-tgaattttaggatttaagtcgggattttgacaaca 212  Q
    |||||||||||||||  ||||||||||||||||||||||||||||  | ||||||||| ||||||||| |||||||||||||||    
T  19704500 ttctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 215
Target Start/End: Complemental strand, 45403226 - 45403028
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||||||| |||||||||||||||||||||||||  ||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||    
T  45403226 aaaaaataataatattaaatatatgttataaatggtatattatcataaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggatttt 45403127  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaatt 215  Q
    || ||||||   ||||| ||||||||||| |||||||||||| ||||||||||||||||  || ||||||| |||||||||| ||||||||||||||||    
T  45403126 gcttattttgagattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaatt 45403028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 17 - 210
Target Start/End: Original strand, 3094175 - 3094378
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttata----------agaaatcgtaaaatcgcaatcaaaatt 106  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||          | ||||||||||||||||||||||||     
T  3094175 aaaaaaaaaaaatactaaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatc 3094274  T
Q  107 gatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttg 206  Q
    ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||| |||||||||| |||||||||||  ||||||    
T  3094275 gatggattttgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttg 3094374  T
Q  207 acaa 210  Q
    ||||    
T  3094375 acaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 23142371 - 23142224
Alignment:
Q  18 aaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  23142371 aaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttg 23142272  T
Q  118 cctattttagaattctactatggatttaggtcgttgaaggtgaagaaa 165  Q
    |||||||||| ||||||||||||||||  |||||||||| ||||||||    
T  23142271 cctattttaggattctactatggatttcagtcgttgaagttgaagaaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 27836406 - 27836593
Alignment:
Q  27 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 126  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| |||||||    
T  27836406 aatactaaatacatgttataaatggtatatagtcataaatgacttagtttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttatttta 27836505  T
Q  127 gaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||||||||||  || |||||||||||| |||  |||||||| |||||||||||||| |||||  | ||||||||||||||    
T  27836506 gaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctgaattttaggatctaagtttgaattttgacaacaat 27836593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 6811017 - 6810861
Alignment:
Q  18 aaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttg 117  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||| ||| |||||||    
T  6811017 aaaaaaaataatactaaatatatgttataaatgatatatagttataaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgat-gattttg 6810919  T
Q  118 cctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat 175  Q
    ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  6810918 cctattttaaaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 22910146 - 22910319
Alignment:
Q  29 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttaga 128  Q
    |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||      
T  22910146 tactaagtatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaag 22910245  T
Q  129 attctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggat 202  Q
    |||||||||| |||||  ||||||||| ||||||||||||| ||||| || |||||||||||||||||||||||    
T  22910246 attctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagtcgggat 22910319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 29384249 - 29384444
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||| |||| |||||    
T  29384249 aaaaaatactaatactaaatatatgttataaatggtatatagtcataaatgaattgttttataagaaatcgtaaaatcgcaatc-aaatcgatgaatttt 29384347  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctga-attttaggatttaagtcgggattttgacaacaa 213  Q
    ||||||||| | ||| ||||||||||||  |||||||||||||||||||||||||||| ||| | ||||||||||||||  | |||||||||||||||    
T  29384348 gcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaa-tctaagattttaggatttaaacctggattttgacaacaa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 7489216 - 7489409
Alignment:
Q  18 aaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttg 117  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| |||  ||||||    
T  7489216 aaaaatattaatactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttg 7489315  T
Q  118 cctat----tttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
     ||||    ||||||||||||||| ||||||  |||||||||||||||||||   ||||||||||| |||||| ||||||| | |||||||||||||    
T  7489316 tctattttatttagaattctactacggattttagtcgttgaaggtgaagaaa---gcaaaattctgtattttacgatttaattggggattttgacaa 7489409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 17647192 - 17646993
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagt--cataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||||||| | ||||||||| ||| |||||||||||| |   | ||||||||  |||||||||||||||| ||||  |||||||||| |||| |||    
T  17647192 aaaaaataataacattaaatatattttacaaatggtatataataaaaaaaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaatt 17647093  T
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    || |||||||| | ||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||    
T  17647092 tttcctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 25 - 210
Target Start/End: Original strand, 6292282 - 6292467
Alignment:
Q  25 ataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattt 124  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||| |||||| |||| |||| | |||||||||||| | || ||||| | |||||    
T  6292282 ataatattaaatatattttataaatggtatatagtgataaatgacttagattataataaattgtaagaccgcaatcaaaatcgttgaatttttcttattt 6292381  T
Q  125 tagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    ||||||| |||||||| |||  |||||| ||| |||| |||||| ||||||  | ||||||| |||||||||||| ||||| ||||    
T  6292382 tagaattatactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 32424511 - 32424402
Alignment:
Q  35 atatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattcta 134  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||  |||||| ||||||||| ||||||    
T  32424511 atatatgttataaatggtatatagtcataaatgacttagtatataataaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattcta 32424412  T
Q  135 ctatggattt 144  Q
    ||||| ||||    
T  32424411 ctatgaattt 32424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 9212202 - 9212296
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 126  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttta 9212296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 477101 - 477176
Alignment:
Q  139 ggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||| ||| |||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaat 477176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 205
Target Start/End: Complemental strand, 15231862 - 15231733
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat 175  Q
    ||||| |||| |||||||||||||||||  || ||||||||||||||||||  ||| || |||| ||||  ||||||||||||||||||  |||||||||    
T  15231862 tataaaaaattgtaaaatcgcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaacatcgcaaaat 15231763  T
Q  176 tctgaattttaggatttaagtcgggatttt 205  Q
      | || |||||||||||| ||| ||||||    
T  15231762 cttaaagtttaggatttaaatcgagatttt 15231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 15761466 - 15761568
Alignment:
Q  112 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaac 211  Q
    |||||||||||||| | ||| | ||||| ||||  |||||||||||| || ||| || |||||| ||| | |||||||||||||||| ||||||||||||    
T  15761466 attttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaac 15761565  T
Q  212 aat 214  Q
    |||    
T  15761566 aat 15761568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 23136396 - 23136353
Alignment:
Q  167 tcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  23136396 tcgcaaaatcctgaattttaggatttaagtcgggattttgacaa 23136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 24056618 - 24056697
Alignment:
Q  135 ctatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||||  |||||| || ||||| ||||||||||||| ||| |||||||||||||||||  |||||||| ||||||    
T  24056618 ctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataacaat 24056697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 29384200 - 29384240
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  29384200 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 9036757 - 9036801
Alignment:
Q  169 gcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||||||| ||||||||||||||||||||| || ||||||||||||    
T  9036757 gcaaaatcctgaattttaggatttaagtcaggtttttgacaacaa 9036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 17647238 - 17647198
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  17647238 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 17647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 26879810 - 26879778
Alignment:
Q  82 aaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||||||||||||||||||||||||||||    
T  26879810 aaatcgtaaaatcgcaatcaaaattgatggatt 26879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 114
Target Start/End: Original strand, 30240264 - 30240296
Alignment:
Q  82 aaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||||||||||||||||||||||||||||    
T  30240264 aaatcgtaaaatcgcaatcaaaattgatggatt 30240296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 40541781 - 40541819
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  40541781 taaatatatgttataaattgcatatagtcataaatgact 40541819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Original strand, 26574948 - 26574985
Alignment:
Q  84 atcgtaaaatcgcaatcaaaattgatggattttgccta 121  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  26574948 atcgtaaaatcgcaatcaaaattgaaggattttaccta 26574985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 15761246 - 15761286
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||| | ||||||||||||||||||| ||||||||||    
T  15761246 tataagaagtagtaaaatcgcaatcaaaatcgatggatttt 15761286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 15761298 - 15761353
Alignment:
Q  24 aataatactaaatatatgttataaatggtatat--agtcataaatgacttagttta 77  Q
    |||||| ||||||||||||||||||| ||||||  |||||||||||| | ||||||    
T  15761298 aataatgctaaatatatgttataaattgtatatagagtcataaatgagtaagttta 15761353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 16752192 - 16752156
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatga 68  Q
    |||||||||||||||||| | ||||||||||||||||    
T  16752192 taaatatatgttataaattgcatatagtcataaatga 16752156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 23142415 - 23142379
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatgga 112  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  23142415 tataagaaattgtaaaatcgcaatcaaaatcgatgga 23142379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 2e-74; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 31237905 - 31238106
Alignment:
Q  14 accaaaaaataataatac-taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgga 112  Q
    |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31237905 accaaaaaataataatacatgaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgga 31238004  T
Q  113 ttttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    |||| |||||||||  ||||||||||| ||||  ||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||||    
T  31238005 tttttcctattttaagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaaca 31238104  T
Q  213 at 214  Q
    ||    
T  31238105 at 31238106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 31578199 - 31578007
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgc 118  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  31578199 aaaaaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataataaatcgtaaaattgcaatcaaaattgatggattttgc 31578100  T
Q  119 ctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
     |||||||| ||||||||| |||||||  |||||||||||||||||| |||||||||  | |||||||  ||||||||||||||||||||||||    
T  31578099 ttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 1404983 - 1404783
Alignment:
Q  17 aaaaaataataata---ctaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||   |||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  1404983 aaaaaataataatattcctaagtatatgttataaatggtgtatagtcataaatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggat 1404884  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||||| || ||||| ||||||| ||||||||| |||||||||||||||||||||| |||||| || |||||||| |||||||||||||||||||||||||    
T  1404883 tttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaa 1404784  T
Q  214 t 214  Q
    |    
T  1404783 t 1404783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 213
Target Start/End: Original strand, 35565896 - 35566082
Alignment:
Q  27 aatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 126  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||||||||     
T  35565896 aatactaaatatatgttataaattgtatatagtcataaatgactttgtttataagaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttg 35565995  T
Q  127 gaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    | ||||||| ||||||||  ||| |||||  |||||||||||||||||| |||||||||  ||||||||| ||||||||||||||||    
T  35565996 ggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 36430044 - 36429848
Alignment:
Q  18 aaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttg 117  Q
    ||||| || |||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  36430044 aaaaaaaaaaatactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttg 36429945  T
Q  118 cctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||||   ||||| ||||| | ||  ||||||||||||||||||||||||||||| ||  ||| |||||||||||| |||||||||||||||||    
T  36429944 cctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaat 36429848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 214
Target Start/End: Complemental strand, 30432593 - 30432419
Alignment:
Q  40 tgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatg 139  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||   |||||||||||    
T  30432593 tgttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatg 30432494  T
Q  140 gatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||  ||||||||||| ||||||||||| ||||| ||  ||||||| |||||| || ||||||||||||||||    
T  30432493 gatttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaat 30432419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 15588786 - 15588978
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgc 118  Q
    |||| ||||||||||||||||||  |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||  ||| |||||||     
T  15588786 aaaaaaataatactaaatatatg--ataaatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattttgt 15588883  T
Q  119 ctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||   ||||||||||| ||||  || ||||||||||||||||| |||||||| |||||||||| || ||||||||||||||||||| ||||    
T  15588884 ctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaattttaaga-ttaagtcgggattttgacagcaat 15588978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 32 - 214
Target Start/End: Complemental strand, 20063896 - 20063714
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaatt 131  Q
    |||||| |||| |||||||||||| |||||||||||| |||||| |||||||| |||||||||||||| ||||| |||| |||||||||||||| | |||    
T  20063896 taaatacatgtgataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggatt 20063797  T
Q  132 ctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||||||| ||| |||||| ||||||||  |||||||   || |||||||| |||||||||||||||||||||||||    
T  20063796 ctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaat 20063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 85 - 214
Target Start/End: Original strand, 23863321 - 23863450
Alignment:
Q  85 tcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattt 184  Q
    |||||||||||||| |||||| |||||||||||||||||||   ||||||||||||||||  ||||||||| ||||||||||||||||||||||  ||||    
T  23863321 tcgtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattt 23863420  T
Q  185 taggatttaagtcgggattttgacaacaat 214  Q
    ||| ||||||||||||||||||||||||||    
T  23863421 tagaatttaagtcgggattttgacaacaat 23863450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 1690657 - 1690768
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||| |    
T  1690657 accaaaaaataataatattaaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgggt 1690756  T
Q  114 tttgcctatttt 125  Q
    || |||||||||    
T  1690757 ttcgcctatttt 1690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 81 - 212
Target Start/End: Original strand, 25539222 - 25539353
Alignment:
Q  81 gaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctga 180  Q
    |||||||| |||||||| ||||||| |||||||||||| |||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |  |||    
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttga 25539321  T
Q  181 attttaggatttaagtcgggattttgacaaca 212  Q
    |||||||||||||| |||||||||| ||||||    
T  25539322 attttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 19491982 - 19491853
Alignment:
Q  88 taaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattt--t 185  Q
    |||||||||||||||||| |||||||||| |||||||| | ||||| ||||||||||  |||||| ||| |||||||||||||||||| ||  ||||  |    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctatttt-ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttat 19491884  T
Q  186 aggatttaagtcgggattttgacaacaatta 216  Q
    ||||||||| ||| |||||||||||||||||    
T  19491883 aggatttaattcgagattttgacaacaatta 19491853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 1690785 - 1690891
Alignment:
Q  108 atggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttga 207  Q
    |||| ||||||||||||| | ||| |||||||||| |  ||||| |||||||||||||||| |||||| || ||||||| ||||||||||||  ||||||    
T  1690785 atgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttga 1690884  T
Q  208 caacaat 214  Q
    |||||||    
T  1690885 caacaat 1690891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 17995157 - 17995055
Alignment:
Q  112 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaac 211  Q
    |||||||||||||| ||||| | ||| | ||||  |||||||| |||||| ||| ||||||||||||| |||||||| |||||||||| ||||| |||||    
T  17995157 attttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaac 17995058  T
Q  212 aat 214  Q
    |||    
T  17995057 aat 17995055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 19492128 - 19492079
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaat 66  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  19492128 aaaaaataataatgctaaatatatgttataaattgtatatagtcataaat 19492079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 214
Target Start/End: Complemental strand, 16766809 - 16766710
Alignment:
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||| |||||||| ||||| ||||||||||   |||||||||||||| ||| ||| ||||| || ||||||| ||||||||||   ||||||||||||||    
T  16766809 ttgcttattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 31023325 - 31023262
Alignment:
Q  112 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat 175  Q
    |||||||||||||||| ||||||||||| ||||  ||||||||| ||||| |||||||||||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaat 31023262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 34841779 - 34841717
Alignment:
Q  15 ccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    ||||| || ||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||    
T  34841779 ccaaacaaaaataataataaatatatgttataaattgtatatagtcataaataactcagttta 34841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 214
Target Start/End: Complemental strand, 15266187 - 15266082
Alignment:
Q  109 tggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgac 208  Q
    |||||||| |||||||| ||||| ||  ||||||||   || |||||| |||| |||||  |||||| |||||||||||||||||| ||  |||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  209 aacaat 214  Q
    ||||||    
T  15266087 aacaat 15266082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 25539085 - 25539138
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    |||||| |||||||||||||||| || |||||||||||||||||||| ||||||    
T  25539085 aataatgctaaatatatgttatatattgtatatagtcataaatgactcagttta 25539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 13502561 - 13502601
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 19262245 - 19262285
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtat 54  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  19262245 accaaaaaataataatactaactatatgttataaatggtat 19262285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 15516624 - 15516687
Alignment:
Q  150 gttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||||||||||| ||||||||||||| |||||| ||| ||||||||| | |||||| |||||||    
T  15516624 gttgaaggtgaataaagtcgcaaaatgctgaatattaagatttaagttgcgattttaacaacaa 15516687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 19245204 - 19245153
Alignment:
Q  163 aaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||| ||||| ||||||||||  ||||||||||||||||||||||||||    
T  19245204 aaagtcgtaaaatcctgaattttaaaatttaagtcgggattttgacaacaat 19245153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 27407032 - 27406993
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggattt 115  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  27407032 tataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 41002202 - 41002156
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||    
T  41002202 aataatgctaaatatatgttataaattgcatatagtcataaatgact 41002156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 77
Target Start/End: Complemental strand, 16766975 - 16766922
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    |||||| |||||||| |||||||||| ||||| |||||||||||||| ||||||    
T  16766975 aataatgctaaatatttgttataaattgtatacagtcataaatgactcagttta 16766922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 974507 - 974467
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgactta 72  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  974507 taaatatatgttataaattgcatatagtcataaatgactta 974467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 5395674 - 5395777
Alignment:
Q  111 gattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    |||||||||||||||   ||||| ||||||||||  ||| || ||| |||| ||||||||||||| ||  |||||| |||||| |||   ||||||||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaa 5395773  T
Q  211 caat 214  Q
    ||||    
T  5395774 caat 5395777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 13503067 - 13503162
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattct-gaattttaggatttaagtcgggattt 204  Q
    |||||||||||||||||||||| |  |||||||||  | ||||||| ||||| ||  ||||||||| || || ||||| ||||||||||| |||||    
T  13503067 ggattttgcctattttagaattttgttatggatttgagccgttgaaagtgaataagatcgcaaaatcctagatttttaagatttaagtcgagattt 13503162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 186
Target Start/End: Complemental strand, 34841659 - 34841584
Alignment:
Q  111 gattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaatttta 186  Q
    |||||||| | |||| | ||||| ||||||||||  ||||||||||||||| ||||||||| ||| || |||||||    
T  34841659 gattttgcatgttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaatttta 34841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 210
Target Start/End: Complemental strand, 15627689 - 15627659
Alignment:
Q  180 aattttaggatttaagtcgggattttgacaa 210  Q
    |||||||||||||||||||||||||||||||    
T  15627689 aattttaggatttaagtcgggattttgacaa 15627659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 26251696 - 26251658
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  26251696 taaatatatgttataaattgcatatagtcataaatgact 26251658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 16767026 - 16766997
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaat 105  Q
    ||||||||||||||||||||||||||||||    
T  16767026 tataagaaatcgtaaaatcgcaatcaaaat 16766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 21869280 - 21869321
Alignment:
Q  31 ctaaatatatgttataaatggtatatagtcataaatgactta 72  Q
    ||||||||||||||||||| | |||||||||||||| |||||    
T  21869280 ctaaatatatgttataaattgcatatagtcataaataactta 21869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 5395475 - 5395507
Alignment:
Q  37 atatgttataaatggtatatagtcataaatgac 69  Q
    ||||||||||||| |||||||||||||||||||    
T  5395475 atatgttataaattgtatatagtcataaatgac 5395507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 15588742 - 15588782
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  15588742 tataagaaattataaaatcgcaatcaaaatcgatggatttt 15588782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 19519609 - 19519577
Alignment:
Q  82 aaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||||||||||||||||||||||| ||||    
T  19519609 aaatcgtaaaatcgcaatcaaaattgatagatt 19519577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 24473400 - 24473336
Alignment:
Q  150 gttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||||  ||| ||||||||| ||||||||| ||| |||||||  ||||| |||||||||    
T  24473400 gttgaaggtgagtaaaatcgcaaaatcctgaattttgggacttaagtcacgatttcgacaacaat 24473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 30433056 - 30433016
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  30433056 tataggaaattgtaaaatcgcaatcaaaatagatggatttt 30433016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 114
Target Start/End: Complemental strand, 34841816 - 34841784
Alignment:
Q  82 aaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||||||||||||||||||| ||||||||    
T  34841816 aaatcgtaaaatcgcaatcaaaatcgatggatt 34841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 35565845 - 35565885
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  35565845 tataagaaatcataaaatcacaatcaaaatcgatggatttt 35565885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 140; Significance: 3e-73; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 8638 - 8443
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgc 118  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  8638 aaaaaaataatactaaatatatggtataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgc 8539  T
Q  119 ctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     |||||| | ||||||| || |||||| |||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||||||||    
T  8538 ttattttgggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaacaat 8443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 8682 - 8642
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  8682 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 8642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 7384 - 7584
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||| |||| ||    
T  7384 accaaaaaacaataatactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcgcaattaaaatcgatgaat 7483  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  7484 tttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattctaacaacaa 7583  T
Q  214 t 214  Q
    |    
T  7584 t 7584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 7e-68; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 48 - 214
Target Start/End: Complemental strand, 29067450 - 29067284
Alignment:
Q  48 atggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttagg 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| | ||||||||||||||||  |    
T  29067450 atggtatatagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgag 29067351  T
Q  148 tcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  29067350 tcgttgaaggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 29067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 21 - 214
Target Start/End: Original strand, 8156066 - 8156260
Alignment:
Q  21 aataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcct 120  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  8156066 aataataatactaaatatatgttataaatggtatatagttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtct 8156165  T
Q  121 -attttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
     ||||| | ||| ||||||||||||  ||| ||||||||||| ||| ||| ||||||||||||||||| |||||||| |||||||||||||||||    
T  8156166 aattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaat 8156260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 39428101 - 39427905
Alignment:
Q  15 ccaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    |||||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |    
T  39428101 ccaaaaaaaattaatactaaatatatgttataagtagtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggact 39428002  T
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaac 211  Q
    ||| ||||||| | |||||||||| |||||  ||||||||| ||||||||||| ||||||| | | ||||||  |||||| ||||||||||||||||    
T  39428001 ttgtctattttgggattctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 28745964 - 28745770
Alignment:
Q  26 taatactaaatatatgttataaatggtatatagtcataaatgacttagtttataa------gaaatcgtaaaatcgcaatcaaaattgatggattttgcc 119  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||      ||||||||||||||||||||||||| |||| |||||| |    
T  28745964 taatagtaaatatatgttataaatagtatatagtcataaatgacttagtttataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtc 28745865  T
Q  120 tattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||   ||||||||||| ||||  ||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||    
T  28745864 tattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaat 28745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 214
Target Start/End: Original strand, 24620132 - 24620332
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||| |||||    
T  24620132 aaaaaataaaaatactaaatatattttataaatggtatataatcataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaatttt 24620231  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaa---gtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||||||||   |||||||| || ||||  |||||||||||||||||||   ||||||||||  | |||||||||||||||||||| |||||||||||||    
T  24620232 gcctattttgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaa 24620331  T
Q  214 t 214  Q
    |    
T  24620332 t 24620332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 52 - 209
Target Start/End: Complemental strand, 17064483 - 17064326
Alignment:
Q  52 tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||| |||   |||||    
T  17064483 tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgt 17064384  T
Q  152 tgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    |||||||||| | | ||||||||| |||||||||| ||||||||||||||||||||||    
T  17064383 tgaaggtgaacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 20756192 - 20756039
Alignment:
Q  61 ataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtga 160  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||  ||||||||||||||||  ||| ||||||||||    
T  20756192 ataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtga 20756093  T
Q  161 agaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  20756092 agaaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 3449265 - 3449419
Alignment:
Q  58 gtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaagg 157  Q
    |||| |||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||||||| |||||  | |||||||||    
T  3449265 gtcacaaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaagg 3449363  T
Q  158 tgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    | |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3449364 taaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 21963626 - 21963438
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatata--gtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    ||||| ||||||||||||||||| ||||||||| |||||||  |||||||||||||||||  ||||||||||| |||||||| |||||||| ||||||||    
T  21963626 aaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggatt 21963529  T
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggatttt 205  Q
    |||| |||||||| ||| ||||||||||||  |||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  21963528 ttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 17 - 205
Target Start/End: Complemental strand, 21986062 - 21985874
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatata--gtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatt 114  Q
    ||||| ||||||||||||||||| ||||||||| |||||||  |||||||||||||||||  ||||||||||| |||||||| |||||||| ||||||||    
T  21986062 aaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggatt 21985965  T
Q  115 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggatttt 205  Q
    |||| |||||||| ||| ||||||||||||  |||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  21985964 ttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 22137473 - 22137278
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||| ||||||||||| ||||| ||||||||||    
T  22137473 aaaaattaataatactaaatata-gttataaatagtatatagtcataaatgacttagtaaataagaaatcg-aaaatcgcaattaaaatcgatggatttt 22137376  T
Q  117 gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    || |||||| | ||| ||||||||||||  | |||| |||||||||||||||| || ||  |||||||||||||||||||| ||||||| | ||||||    
T  22137375 gcatattttgggattttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttaggatttaagtcaggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 42697044 - 42696920
Alignment:
Q  17 aaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  42697044 aaaaaaaaaaaataccaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttt 42696945  T
Q  117 gcctattttagaattctactatgga 141  Q
    |||||||||   |||||||||||||    
T  42696944 gcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 22355991 - 22356182
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22355991 accaaaaaataataataataaatatatgttataaatggta----------aatgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggat 22356080  T
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtg-aagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    ||||| |||||||| ||||||||||| ||| |  | ||||||| || || ||| ||  ||||| ||||||||||||||||||||||| ||||||| ||||    
T  22356081 tttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaaaaatcttaaaatcctgaattttaggatttaagtcggaattttgataaca 22356180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 28 - 196
Target Start/End: Original strand, 22494731 - 22494892
Alignment:
Q  28 atactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttag 127  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||||||| |||| ||||||  ||||||||    
T  22494731 atactaaatatatgttataaatggtatatagtcataactgacttagtttat-------cgtaaaatcgcaatcaaaatcgatgaattttgtttattttag 22494823  T
Q  128 aattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaat-tctgaattttaggatttaagt 196  Q
     ||||||||||| ||||  ||||||||||||||| ||||||||||||| || | ||||||||||||||||    
T  22494824 gattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcag-attttaggatttaagt 22494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 15515190 - 15515297
Alignment:
Q  19 aaaataataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgc 118  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | ||||| || | ||||| |    
T  15515190 aaaaaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtgaaatcgaagttaaaatcgacgaatttttc 15515289  T
Q  119 ctatttta 126  Q
    ||||||||    
T  15515290 ctatttta 15515297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 24649684 - 24649818
Alignment:
Q  81 gaaatcgtaaaatcgcaatcaaaattgatggattttgcct-attttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctg 179  Q
    |||||||||||||| || |||||||||||| ||||||| | ||||| ||||||||||||||||||  |||||||||||||||| |||||  ||||| ||     
T  24649684 gaaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatccta 24649783  T
Q  180 aattttaggatttaagtcgggattttgacaacaat 214  Q
     |||||| |||||||||||||||||||||||||||    
T  24649784 gattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 88 - 214
Target Start/End: Original strand, 30727694 - 30727820
Alignment:
Q  88 taaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttag 187  Q
    |||||||||||||||||| |||| |||||| ||||||| | |||||||||| |||||  ||||||||||||||||||||||| ||||||| | ||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  188 gatttaagtcgggattttgacaacaat 214  Q
    |||||||||| ||||||||| ||||||    
T  30727794 gatttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 217 - 362
Target Start/End: Original strand, 3181511 - 3181658
Alignment:
Q  217 aaccctaaaaagtgcaagaaactaacattactgataagaagnnnnnnnnnn-ctacatttgctagtatctacacaaggtcattgagataccaggcaaagg 315  Q
    |||||||||||||||| ||||||||||||||||||||||||           ||||||||| ||||||||||||||||||||||  |||||||||||||     
T  3181511 aaccctaaaaagtgcatgaaactaacattactgataagaagaagaaaaaaaactacatttgttagtatctacacaaggtcattggtataccaggcaaaga 3181610  T
Q  316 aaaaaa-gggatcatttatttagcattggagtcataatgtccatctta 362  Q
    |||||| ||||||||| ||||||||| |||| ||| || |||| ||||    
T  3181611 aaaaaaggggatcattcatttagcatcggagacatgatttccacctta 3181658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 15806531 - 15806634
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    ||||||||||| |||| | ||||| ||||||||||  ||| ||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgaca 15806629  T
Q  210 acaat 214  Q
    |||||    
T  15806630 acaat 15806634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 214
Target Start/End: Original strand, 25870350 - 25870505
Alignment:
Q  68 acttagtttataagaaatcgtaaaatcgcaatcaaaatt-----gatggattttgcctattttagaattctactatggatttaggtcgtt----gaaggt 158  Q
    ||||| ||||||||||||||||||||||||||||||||      |||||||||||||||||||    |||||||| | ||||  ||||||    |||| |    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagat 25870449  T
Q  159 gaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||| ||||||  || |||||||||||||||||| |||||||||||||||    
T  25870450 gaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaat 25870505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Complemental strand, 27676460 - 27676356
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    ||||||| |||||||| | ||||| ||||||||||  ||| | ||||||||| ||||||||||||| ||| |||||| |||||||||| |||||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  210 acaat 214  Q
    |||||    
T  27676360 acaat 27676356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 28135824 - 28135723
Alignment:
Q  112 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaac 211  Q
    ||||||||||||| |||||| | ||||||||||  |||  |||| ||||| ||||||||||||| |||||||||| ||||||| |||| |||||||||||    
T  28135824 attttgcctatttgagaattttgctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaac 28135725  T
Q  212 aa 213  Q
    ||    
T  28135724 aa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 17796477 - 17796377
Alignment:
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||| ||||||||| ||||| ||||| ||||  || ||||||| |||| ||||||| ||||| ||  |||||| |||||||||||| |||||||||||||    
T  17796477 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 17796378  T
Q  214 t 214  Q
    |    
T  17796377 t 17796377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 17796586 - 17796486
Alignment:
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||| ||||||||| ||||| ||||| ||||| || |||||||||||| ||||||| ||||| ||  |||||| ||||||| |||  |||||||||||||    
T  17796586 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 17796487  T
Q  214 t 214  Q
    |    
T  17796486 t 17796486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 19104917 - 19104817
Alignment:
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||| ||||||||| ||||| ||||| ||||  || ||||||| |||| ||||||| ||||| ||  |||||| |||||||||||| |||||||||||||    
T  19104917 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 19104818  T
Q  214 t 214  Q
    |    
T  19104817 t 19104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 19105026 - 19104926
Alignment:
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    |||| ||||||||| ||||| ||||| ||||| || |||||||||||| ||||||| ||||| ||  |||||| ||||||| |||  |||||||||||||    
T  19105026 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 19104927  T
Q  214 t 214  Q
    |    
T  19104926 t 19104926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 25870251 - 25870294
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatata 57  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  25870251 accaaaaaacaataatactaaatatatgttataaatggtatata 25870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 10872971 - 10873065
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattt 204  Q
    ||||||||||||||||   ||||| ||||||||||  ||||||||||||||| ||  || |||||| ||| |||||||||||| | |||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggatttcaatcgggattt 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 13005987 - 13005927
Alignment:
Q  154 aaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||| |||||||||||||| ||||||||   |||||||||| |||||||||||||||    
T  13005987 aaggtgaataaagtcgcaaaattatgaattttgaaatttaagtcgagattttgacaacaat 13005927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 17796368 - 17796272
Alignment:
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    |||| ||||||||| ||||| ||||| ||||  || |||||||||||| |||||| |||||| ||  |||||| ||||||||| || ||||||||||    
T  17796368 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 17796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 19104808 - 19104712
Alignment:
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    |||| ||||||||| ||||| ||||| ||||  || |||||||||||| |||||| |||||| ||  |||||| ||||||||| || ||||||||||    
T  19104808 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 19104712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 42696914 - 42696870
Alignment:
Q  166 gtcgcaaaattctgaattttaggatttaagtcgggattttgacaa 210  Q
    |||||||||| |||||||||| |||||||||||||||||||||||    
T  42696914 gtcgcaaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 9152935 - 9152984
Alignment:
Q  37 atatgttataaatggtatatagtcataaatgacttagtttataagaaatc 86  Q
    ||||| |||| ||| ||||||||||||||| |||||||||||||||||||    
T  9152935 atatgctatacatgatatatagtcataaataacttagtttataagaaatc 9152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 3449198 - 3449238
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  3449198 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 3449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 6136457 - 6136497
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 8592359 - 8592399
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgactta 72  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  8592359 taaatatatgttataaattgcatatagtcataaatgactta 8592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 17796807 - 17796771
Alignment:
Q  77 ataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||||| |||||||||||||||||    
T  17796807 ataagaaatcgtaaaatcgaaatcaaaattgatggat 17796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 113
Target Start/End: Complemental strand, 19105247 - 19105211
Alignment:
Q  77 ataagaaatcgtaaaatcgcaatcaaaattgatggat 113  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19105247 ataagaaatcgtaaaatcgaaatcaaaattgatggat 19105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 25870210 - 25870250
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  25870210 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 25870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 19348722 - 19348684
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  19348722 taaatatatgttataaattgcatatagtcataaatgact 19348684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 27676617 - 27676579
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgact 70  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  27676617 taaatatatgttataaattatatatagtcataaatgact 27676579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 9169842 - 9169806
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatga 68  Q
    |||||||||||||||||| | ||||||||||||||||    
T  9169842 taaatatatgttataaattgcatatagtcataaatga 9169806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 10872603 - 10872643
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||||||||||||  ||| ||||||||||||||||    
T  10872603 tataagaaatcgtaaaatcagaataaaaattgatggatttt 10872643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 13286185 - 13286145
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||||| |||| ||||| ||||||||||    
T  13286185 tataagaaatcgtaaaatcacaatgaaaatcgatggatttt 13286145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 17064548 - 17064508
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||||| ||||||| ||||||||||| ||||||||||    
T  17064548 tataagaaattgtaaaattgcaatcaaaatcgatggatttt 17064508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 20756263 - 20756223
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  20756263 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 20756223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 21963672 - 21963632
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  21963672 tataagaaatcgtaaaaccagaatcaaaattgatggatttt 21963632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 21986108 - 21986068
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  21986108 tataagaaatcgtaaaaccagaatcaaaattgatggatttt 21986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 22137518 - 22137478
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  22137518 tataagaaatcgtaaaaccaaaatcaaaattgatggatttt 22137478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 27676677 - 27676637
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||||||||||| ||||||||||  |||||||||    
T  27676677 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 27676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 28746017 - 28745977
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  28746017 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 28745977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 39428144 - 39428104
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  39428144 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 39428104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 42697089 - 42697049
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||||||||| |||| ||||||||||||| ||||||||||    
T  42697089 tataagaaatcataaactcgcaatcaaaatcgatggatttt 42697049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 214
Target Start/End: Original strand, 93634 - 93833
Alignment:
Q  14 accaaaaaataataatactaaatatatgttataaatggtatat-agtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgga 112  Q
    ||||||||  |||| ||||||||||||||||| ||| |||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||||    
T  93634 accaaaaacaaatattactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatgga 93733  T
Q  113 ttttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 212  Q
    ||| ||||||||||||||||| ||||||||||  || ||||| |||||||||| |  |||||||||| ||||||||||||||||||||||||||||||||    
T  93734 tttcgcctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggattttgacaaca 93831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 93593 - 93633
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  93593 tataataaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 76 - 202
Target Start/End: Original strand, 91 - 218
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt-gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaa 174  Q
    |||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||    
T  91 tataagaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaa 190  T
Q  175 ttctgaattttaggatttaagtcgggat 202  Q
    | ||| ||||||||||||||||||||||    
T  191 tcctgcattttaggatttaagtcgggat 218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 37191 - 37295
Alignment:
Q  110 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgaca 209  Q
    ||||||| |||||||||  ||||| ||||||||||  || |||||||||||| ||| | ||||||||||||||||||  ||||||||||| |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  210 acaat 214  Q
    |||||    
T  37291 acaat 37295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 48839 - 48917
Alignment:
Q  136 tatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    |||||||||  ||||||||||||||| ||||| ||||||||||  ||||||||||||||||||| ||||| ||||||||    
T  48839 tatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaat 48917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 58736 - 58790
Alignment:
Q  39 atgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaat 93  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  58736 atgttataagtggtatatagtcataaatgatttagtttataagaaatcgtaaaat 58790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 56313 - 56353
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  56313 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 56353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 35103 - 35188
Alignment:
Q  129 attctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaat 214  Q
    ||||||| ||| ||||  |||||| |||||||| |||||  ||||||| |||||||||| |||||||||| |||||||||||||||    
T  35103 attctacaatgaatttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaacaat 35188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 8900 - 8952
Alignment:
Q  25 ataatactaaatatatgttataaatggtatatagtcataaatgacttagttta 77  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||| ||||||    
T  8900 ataatgctaaatatatgttataagttgtatatagtcataaatgactcagttta 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 9049 - 9149
Alignment:
Q  114 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 213  Q
    ||||||||||| || ||| | ||||||||||  ||||||||||||||| ||| || |||||| ||  ||||||  |||||| || |||||||||||||||    
T  9049 tttgcctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaa 9148  T
Q  214 t 214  Q
    |    
T  9149 t 9149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 8847 - 8887
Alignment:
Q  76 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 116  Q
    |||||||| | ||||||||||||||||||| ||||||||||    
T  8847 tataagaacttgtaaaatcgcaatcaaaatcgatggatttt 8887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 38491 - 38531
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgactta 72  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  38491 taaatatatgttataaattgtatatagtcataaaggactta 38531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 76273 - 76308
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatg 67  Q
    |||||||||||||||||| |||||||||||||||||    
T  76273 taaatatatgttataaattgtatatagtcataaatg 76308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 512 - 466
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||| ||||||||||| ||||||| | ||||||||||||||||||    
T  512 aataatgctaaatatatgatataaattgcatatagtcataaatgact 466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 8332 - 8288
Alignment:
Q  25 ataatactaaatatatgttataaatggtatatagtcataaatgact 70  Q
    |||||||||||||||||| |||||| | ||||||||||||||||||    
T  8332 ataatactaaatatatgt-ataaattgcatatagtcataaatgact 8288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 133075 - 133112
Alignment:
Q  32 taaatatatgttataaatggtatatagtcataaatgac 69  Q
    |||||||||||||||||| | |||||||||||||||||    
T  133075 taaatatatgttataaattgcatatagtcataaatgac 133112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 5164 - 5208
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatga 68  Q
    |||||| ||||||||||||||||||| | || |||||||||||||    
T  5164 aataatgctaaatatatgttataaattgcatgtagtcataaatga 5208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 142808 - 142764
Alignment:
Q  24 aataatactaaatatatgttataaatggtatatagtcataaatga 68  Q
    |||||| ||||||||||||||||||| | ||||||||| ||||||    
T  142808 aataatgctaaatatatgttataaattgcatatagtcaaaaatga 142764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University