View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9050_low_15 (Length: 261)

Name: NF9050_low_15
Description: NF9050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9050_low_15
NF9050_low_15
[»] chr3 (85 HSPs)
chr3 (1-261)||(40807002-40807262)
chr3 (1-261)||(22307369-22307629)
chr3 (1-261)||(17538113-17538373)
chr3 (19-261)||(30175318-30175560)
chr3 (18-203)||(5841846-5842030)
chr3 (137-261)||(17519827-17519951)
chr3 (137-261)||(17534689-17534813)
chr3 (131-259)||(41173235-41173363)
chr3 (131-261)||(5214924-5215053)
chr3 (150-261)||(40811817-40811928)
chr3 (131-261)||(17693133-17693264)
chr3 (18-180)||(49970003-49970178)
chr3 (134-259)||(5206521-5206647)
chr3 (131-261)||(15932371-15932500)
chr3 (18-202)||(20630230-20630427)
chr3 (18-246)||(1465544-1465785)
chr3 (29-204)||(12269359-12269547)
chr3 (131-261)||(14507910-14508039)
chr3 (19-261)||(31224706-31224950)
chr3 (28-246)||(49389813-49390045)
chr3 (18-157)||(40811949-40812087)
chr3 (18-246)||(18439980-18440223)
chr3 (19-259)||(15447752-15447991)
chr3 (18-261)||(31415265-31415505)
chr3 (131-261)||(13516400-13516529)
chr3 (130-261)||(37427616-37427746)
chr3 (18-111)||(11912929-11913022)
chr3 (150-210)||(17519784-17519844)
chr3 (150-210)||(17534646-17534706)
chr3 (145-228)||(23413557-23413640)
chr3 (19-85)||(1988984-1989050)
chr3 (20-204)||(14500923-14501120)
chr3 (145-206)||(45796919-45796980)
chr3 (131-258)||(42353471-42353598)
chr3 (18-203)||(45796969-45797166)
chr3 (139-204)||(52466418-52466484)
chr3 (26-113)||(12852499-12852587)
chr3 (194-261)||(17044102-17044169)
chr3 (176-261)||(45531530-45531616)
chr3 (174-258)||(14153376-14153461)
chr3 (194-259)||(17259167-17259232)
chr3 (220-261)||(19569277-19569318)
chr3 (150-261)||(16728341-16728453)
chr3 (143-261)||(323967-324083)
chr3 (218-261)||(2842417-2842460)
chr3 (218-261)||(9577535-9577578)
chr3 (150-261)||(16044426-16044537)
chr3 (150-261)||(16059285-16059396)
chr3 (132-254)||(20417138-20417260)
chr3 (159-261)||(316030-316131)
chr3 (220-261)||(6155696-6155737)
chr3 (220-261)||(11192009-11192050)
chr3 (192-261)||(14519413-14519482)
chr3 (150-259)||(16049904-16050013)
chr3 (174-258)||(46751964-46752049)
chr3 (218-261)||(13026638-13026682)
chr3 (218-261)||(13031727-13031771)
chr3 (18-82)||(23413372-23413436)
chr3 (219-261)||(14642507-14642550)
chr3 (218-261)||(18700663-18700706)
chr3 (218-261)||(19884488-19884531)
chr3 (218-261)||(35065545-35065588)
chr3 (192-258)||(53646836-53646903)
chr3 (219-261)||(15206845-15206887)
chr3 (192-261)||(17207192-17207262)
chr3 (220-261)||(17548519-17548561)
chr3 (198-259)||(42327254-42327316)
chr3 (161-258)||(50348996-50349094)
chr3 (220-257)||(24545691-24545728)
chr3 (218-259)||(44269575-44269616)
chr3 (218-258)||(11258486-11258526)
chr3 (218-261)||(12512775-12512819)
chr3 (219-257)||(6158453-6158492)
chr3 (18-81)||(6808175-6808238)
chr3 (218-261)||(13919239-13919282)
chr3 (218-261)||(43889972-43890015)
chr3 (219-261)||(15245927-15245969)
chr3 (219-261)||(15265048-15265090)
chr3 (219-257)||(23318883-23318921)
chr3 (220-258)||(50756324-50756362)
chr3 (161-257)||(10562772-10562869)
chr3 (222-259)||(11886633-11886670)
chr3 (141-261)||(15565534-15565652)
chr3 (119-203)||(23413485-23413568)
chr3 (219-258)||(37037873-37037913)
[»] chr6 (59 HSPs)
chr6 (1-261)||(18708506-18708766)
chr6 (1-235)||(23151052-23151286)
chr6 (18-203)||(28708539-28708723)
chr6 (1-148)||(27322204-27322351)
chr6 (18-147)||(18927796-18927925)
chr6 (131-258)||(17318986-17319113)
chr6 (142-261)||(27323545-27323664)
chr6 (18-180)||(19399684-19399859)
chr6 (18-246)||(25956754-25956996)
chr6 (145-241)||(31733740-31733836)
chr6 (18-261)||(20734198-20734442)
chr6 (149-261)||(20136579-20136691)
chr6 (149-261)||(22196178-22196290)
chr6 (149-261)||(23528201-23528313)
chr6 (18-204)||(27850966-27851156)
chr6 (18-110)||(31630660-31630752)
chr6 (18-111)||(34297020-34297113)
chr6 (168-258)||(23538580-23538670)
chr6 (131-203)||(31733825-31733896)
chr6 (132-259)||(22212379-22212506)
chr6 (159-260)||(15895839-15895940)
chr6 (148-257)||(16245249-16245358)
chr6 (149-261)||(18203989-18204099)
chr6 (132-258)||(19829822-19829948)
chr6 (168-261)||(17105603-17105696)
chr6 (193-261)||(23500700-23500768)
chr6 (18-89)||(2201149-2201220)
chr6 (218-261)||(19656303-19656346)
chr6 (218-261)||(27573267-27573310)
chr6 (149-261)||(18177772-18177882)
chr6 (150-258)||(20411669-20411778)
chr6 (219-259)||(23017094-23017134)
chr6 (132-261)||(31735794-31735913)
chr6 (218-261)||(17229823-17229866)
chr6 (218-261)||(17743110-17743153)
chr6 (150-261)||(23083170-23083280)
chr6 (150-261)||(18260102-18260214)
chr6 (218-257)||(7825694-7825733)
chr6 (154-261)||(16493058-16493164)
chr6 (150-261)||(22376785-22376895)
chr6 (18-89)||(22420997-22421068)
chr6 (222-261)||(27126446-27126485)
chr6 (218-261)||(33442957-33443000)
chr6 (220-261)||(19444250-19444292)
chr6 (159-261)||(20223854-20223955)
chr6 (159-261)||(22117838-22117939)
chr6 (228-261)||(16133649-16133682)
chr6 (220-261)||(23492259-23492300)
chr6 (220-261)||(23497857-23497898)
chr6 (218-257)||(15705735-15705774)
chr6 (218-257)||(20078338-20078377)
chr6 (222-261)||(22556243-22556282)
chr6 (218-261)||(23076641-23076684)
chr6 (220-258)||(18458110-18458148)
chr6 (219-261)||(19362336-19362378)
chr6 (220-261)||(21680805-21680846)
chr6 (220-261)||(25920704-25920745)
chr6 (220-261)||(28947502-28947543)
chr6 (221-261)||(18453092-18453132)
[»] chr7 (77 HSPs)
chr7 (1-261)||(12371284-12371544)
chr7 (1-261)||(11066474-11066734)
chr7 (1-261)||(12127950-12128210)
chr7 (18-261)||(8851968-8852211)
chr7 (1-257)||(32434376-32434631)
chr7 (58-261)||(59234-59438)
chr7 (18-203)||(11391929-11392113)
chr7 (1-132)||(13148258-13148389)
chr7 (150-261)||(46386997-46387108)
chr7 (18-204)||(17232410-17232609)
chr7 (19-204)||(37727679-37727877)
chr7 (18-261)||(36686001-36686246)
chr7 (150-261)||(18075463-18075574)
chr7 (128-261)||(13150458-13150582)
chr7 (146-261)||(14183560-14183672)
chr7 (18-204)||(9389830-9390028)
chr7 (18-257)||(30821007-30821248)
chr7 (18-259)||(38480095-38480338)
chr7 (18-204)||(8468225-8468415)
chr7 (18-204)||(14270177-14270367)
chr7 (18-204)||(45847773-45847963)
chr7 (150-261)||(48811907-48812018)
chr7 (126-246)||(6170357-6170477)
chr7 (18-111)||(15213707-15213800)
chr7 (199-259)||(18875856-18875916)
chr7 (159-261)||(20619291-20619392)
chr7 (18-105)||(11085013-11085100)
chr7 (150-261)||(15281315-15281426)
chr7 (132-261)||(11053684-11053812)
chr7 (150-258)||(43277707-43277816)
chr7 (133-259)||(17130615-17130740)
chr7 (193-261)||(19558239-19558307)
chr7 (218-261)||(130985-131028)
chr7 (18-89)||(11092767-11092838)
chr7 (218-261)||(38519282-38519325)
chr7 (31-113)||(18302061-18302143)
chr7 (150-258)||(37785247-37785356)
chr7 (192-261)||(48809461-48809530)
chr7 (18-89)||(9320480-9320551)
chr7 (154-261)||(11769019-11769125)
chr7 (218-261)||(19282136-19282179)
chr7 (218-261)||(44373990-44374033)
chr7 (218-261)||(44382855-44382898)
chr7 (150-261)||(48213815-48213926)
chr7 (132-261)||(17071160-17071288)
chr7 (132-261)||(33001012-33001141)
chr7 (197-259)||(47094138-47094200)
chr7 (154-239)||(11772396-11772480)
chr7 (220-261)||(13133496-13133537)
chr7 (220-261)||(15576925-15576966)
chr7 (218-259)||(42461861-42461902)
chr7 (218-261)||(10660211-10660255)
chr7 (218-261)||(13699710-13699754)
chr7 (218-261)||(36705626-36705670)
chr7 (150-261)||(4070779-4070890)
chr7 (218-261)||(12466225-12466268)
chr7 (222-261)||(16996132-16996171)
chr7 (218-261)||(20585400-20585443)
chr7 (197-258)||(14219982-14220044)
chr7 (219-261)||(15096641-15096683)
chr7 (195-261)||(16077419-16077485)
chr7 (220-261)||(8136045-8136086)
chr7 (219-258)||(9033517-9033556)
chr7 (218-261)||(9177834-9177877)
chr7 (218-261)||(14161835-14161878)
chr7 (19-74)||(15439330-15439385)
chr7 (218-261)||(16091669-16091712)
chr7 (218-261)||(17017623-17017666)
chr7 (218-261)||(32301020-32301063)
chr7 (220-261)||(9744092-9744134)
chr7 (220-258)||(14153885-14153923)
chr7 (159-261)||(18203723-18203824)
chr7 (149-261)||(14044656-14044768)
chr7 (149-261)||(14354686-14354798)
chr7 (222-258)||(15120235-15120272)
chr7 (220-261)||(24270776-24270817)
chr7 (220-261)||(25941395-25941436)
[»] chr4 (66 HSPs)
chr4 (1-261)||(19609330-19609590)
chr4 (18-261)||(35812240-35812483)
chr4 (18-147)||(9923269-9923398)
chr4 (137-261)||(10357362-10357486)
chr4 (18-147)||(11479461-11479590)
chr4 (146-259)||(15042058-15042172)
chr4 (146-259)||(15112252-15112366)
chr4 (18-246)||(15099095-15099336)
chr4 (131-222)||(10357300-10357391)
chr4 (18-246)||(362001-362234)
chr4 (19-118)||(46642722-46642821)
chr4 (137-257)||(33185962-33186081)
chr4 (18-203)||(15868832-15869030)
chr4 (131-261)||(50160063-50160192)
chr4 (149-261)||(16042924-16043036)
chr4 (18-85)||(52873290-52873357)
chr4 (18-203)||(630897-631095)
chr4 (18-110)||(13844435-13844527)
chr4 (145-204)||(15869019-15869078)
chr4 (150-261)||(19738151-19738261)
chr4 (146-204)||(19857371-19857429)
chr4 (126-202)||(14185094-14185169)
chr4 (132-259)||(20614-20740)
chr4 (150-261)||(15364973-15365083)
chr4 (18-113)||(32851279-32851374)
chr4 (150-258)||(19734354-19734463)
chr4 (147-204)||(32851135-32851192)
chr4 (150-261)||(9871456-9871568)
chr4 (150-261)||(13036650-13036762)
chr4 (21-88)||(33186133-33186200)
chr4 (150-258)||(19435659-19435768)
chr4 (218-261)||(11424998-11425041)
chr4 (154-261)||(14852978-14853084)
chr4 (18-89)||(15880727-15880798)
chr4 (218-261)||(16027039-16027082)
chr4 (218-261)||(16997571-16997614)
chr4 (150-261)||(27995815-27995925)
chr4 (159-261)||(14825379-14825480)
chr4 (132-261)||(32467164-32467292)
chr4 (220-261)||(12622443-12622484)
chr4 (197-261)||(40229497-40229562)
chr4 (218-261)||(25090697-25090740)
chr4 (154-261)||(32307097-32307203)
chr4 (218-261)||(40906822-40906865)
chr4 (218-261)||(42874843-42874886)
chr4 (218-261)||(53631547-53631590)
chr4 (218-261)||(55582288-55582331)
chr4 (197-258)||(9637873-9637935)
chr4 (219-261)||(13592273-13592315)
chr4 (219-261)||(15791594-15791636)
chr4 (219-261)||(15791683-15791725)
chr4 (220-261)||(19566950-19566991)
chr4 (220-261)||(26444881-26444921)
chr4 (218-261)||(33244141-33244185)
chr4 (213-259)||(3485029-3485076)
chr4 (132-235)||(15612054-15612156)
chr4 (219-261)||(2425563-2425605)
chr4 (132-257)||(21061582-21061707)
chr4 (220-258)||(25512586-25512624)
chr4 (228-261)||(14507624-14507657)
chr4 (218-259)||(17333189-17333230)
chr4 (220-261)||(46225559-46225599)
chr4 (220-261)||(46740140-46740181)
chr4 (218-258)||(17958380-17958420)
chr4 (218-250)||(37018653-37018685)
chr4 (218-261)||(51992575-51992619)
[»] chr2 (53 HSPs)
chr2 (1-261)||(24781626-24781886)
chr2 (1-259)||(5032110-5032368)
chr2 (18-261)||(24883468-24883702)
chr2 (18-261)||(6576219-6576475)
chr2 (18-261)||(24436059-24436292)
chr2 (124-261)||(22689686-22689823)
chr2 (124-261)||(22694282-22694419)
chr2 (137-261)||(9974931-9975055)
chr2 (18-261)||(24865521-24865766)
chr2 (137-261)||(22500845-22500968)
chr2 (137-261)||(22508779-22508902)
chr2 (131-222)||(9975026-9975116)
chr2 (150-257)||(20915115-20915222)
chr2 (150-261)||(21367861-21367963)
chr2 (150-261)||(24834967-24835078)
chr2 (150-261)||(24815566-24815677)
chr2 (218-261)||(34136850-34136893)
chr2 (167-261)||(19202092-19202185)
chr2 (220-261)||(18391268-18391309)
chr2 (174-257)||(10897695-10897779)
chr2 (218-261)||(3538818-3538861)
chr2 (162-261)||(26392293-26392391)
chr2 (174-261)||(14693277-14693362)
chr2 (19-89)||(22501019-22501089)
chr2 (19-89)||(22508953-22509023)
chr2 (220-261)||(27851632-27851673)
chr2 (220-261)||(27860347-27860388)
chr2 (218-261)||(18389253-18389297)
chr2 (174-261)||(19357998-19358086)
chr2 (218-258)||(21316759-21316799)
chr2 (154-261)||(21237665-21237771)
chr2 (218-261)||(36839218-36839261)
chr2 (220-258)||(21336663-21336701)
chr2 (132-261)||(25045056-25045184)
chr2 (219-261)||(43947534-43947576)
chr2 (132-261)||(5985143-5985263)
chr2 (189-261)||(7672421-7672493)
chr2 (220-261)||(44071545-44071586)
chr2 (221-261)||(22252659-22252699)
chr2 (218-258)||(25140953-25140993)
chr2 (218-261)||(26896316-26896360)
chr2 (218-261)||(21115650-21115693)
chr2 (19-74)||(22501128-22501183)
chr2 (19-74)||(22509062-22509117)
chr2 (230-261)||(23969606-23969637)
chr2 (218-261)||(28653467-28653509)
chr2 (231-261)||(357021-357051)
chr2 (220-261)||(6478254-6478296)
chr2 (219-261)||(18547115-18547157)
chr2 (220-261)||(1384735-1384776)
chr2 (218-259)||(17306533-17306574)
chr2 (218-258)||(22685913-22685953)
chr2 (218-258)||(25587690-25587730)
[»] chr8 (71 HSPs)
chr8 (1-261)||(39936796-39937056)
chr8 (47-261)||(6102530-6102753)
chr8 (18-204)||(27472429-27472628)
chr8 (18-246)||(38550124-38550366)
chr8 (131-258)||(24713230-24713356)
chr8 (18-246)||(20982758-20983000)
chr8 (18-261)||(21579957-21580203)
chr8 (61-166)||(19128055-19128160)
chr8 (18-166)||(18760475-18760636)
chr8 (148-261)||(41681004-41681117)
chr8 (137-261)||(29763740-29763863)
chr8 (149-261)||(2418971-2419081)
chr8 (128-246)||(39833731-39833850)
chr8 (18-113)||(1327158-1327253)
chr8 (1-66)||(19139966-19140031)
chr8 (193-261)||(19128016-19128084)
chr8 (18-111)||(42560278-42560371)
chr8 (193-257)||(18760440-18760504)
chr8 (150-261)||(19929709-19929820)
chr8 (161-261)||(17217640-17217740)
chr8 (131-258)||(20084498-20084625)
chr8 (149-261)||(20502200-20502312)
chr8 (132-261)||(39695401-39695529)
chr8 (159-246)||(13428329-13428417)
chr8 (132-261)||(19699118-19699246)
chr8 (192-261)||(45471398-45471467)
chr8 (218-261)||(5760468-5760511)
chr8 (18-89)||(32807295-32807366)
chr8 (132-261)||(23947252-23947381)
chr8 (220-261)||(22584693-22584734)
chr8 (150-258)||(23669479-23669588)
chr8 (198-261)||(39695550-39695614)
chr8 (161-204)||(1323364-1323407)
chr8 (154-261)||(17086256-17086362)
chr8 (218-261)||(20179486-20179529)
chr8 (218-261)||(22253332-22253375)
chr8 (131-261)||(22259233-22259363)
chr8 (218-261)||(22381899-22381942)
chr8 (18-89)||(41680873-41680944)
chr8 (132-261)||(22244455-22244584)
chr8 (192-261)||(20025222-20025291)
chr8 (220-261)||(22318883-22318924)
chr8 (220-261)||(23888778-23888819)
chr8 (149-261)||(25849327-25849439)
chr8 (197-261)||(42266528-42266593)
chr8 (189-261)||(9227-9299)
chr8 (150-261)||(17907857-17907968)
chr8 (218-261)||(23418397-23418441)
chr8 (149-197)||(35026960-35027008)
chr8 (150-261)||(13665354-13665464)
chr8 (150-261)||(13724629-13724739)
chr8 (133-259)||(18833351-18833474)
chr8 (192-258)||(22207284-22207351)
chr8 (154-261)||(22419517-22419623)
chr8 (18-89)||(29763619-29763689)
chr8 (218-261)||(42818863-42818906)
chr8 (21-119)||(21415217-21415314)
chr8 (219-261)||(22995752-22995794)
chr8 (219-261)||(28397459-28397501)
chr8 (219-261)||(37515436-37515478)
chr8 (220-261)||(17979457-17979498)
chr8 (220-261)||(21513356-21513397)
chr8 (220-261)||(22473597-22473638)
chr8 (220-257)||(36733581-36733618)
chr8 (218-259)||(38988406-38988447)
chr8 (218-259)||(39019503-39019544)
chr8 (133-200)||(21415341-21415409)
chr8 (218-261)||(40493179-40493222)
chr8 (220-257)||(31723757-31723794)
chr8 (220-261)||(36405975-36406016)
chr8 (221-261)||(5083324-5083364)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-261)||(10012-10272)
[»] scaffold0375 (1 HSPs)
scaffold0375 (1-259)||(9089-9346)
[»] scaffold0509 (1 HSPs)
scaffold0509 (1-257)||(9544-9800)
[»] scaffold0080 (1 HSPs)
scaffold0080 (18-261)||(59356-59599)
[»] chr1 (53 HSPs)
chr1 (3-261)||(41227492-41227740)
chr1 (18-259)||(48300871-48301112)
chr1 (131-259)||(20587738-20587866)
chr1 (131-259)||(20592276-20592404)
chr1 (18-204)||(43542899-43543098)
chr1 (149-261)||(20634508-20634620)
chr1 (18-204)||(46382688-46382887)
chr1 (18-204)||(35981821-35982019)
chr1 (18-246)||(28194582-28194824)
chr1 (18-261)||(51274339-51274584)
chr1 (18-246)||(43697120-43697361)
chr1 (18-120)||(20636734-20636836)
chr1 (146-246)||(41305861-41305962)
chr1 (198-258)||(35088526-35088586)
chr1 (149-259)||(16381096-16381203)
chr1 (150-211)||(11809420-11809481)
chr1 (132-261)||(51476029-51476158)
chr1 (150-211)||(23073053-23073114)
chr1 (149-261)||(23967626-23967736)
chr1 (174-257)||(38888023-38888107)
chr1 (132-261)||(8276863-8276991)
chr1 (131-258)||(7052917-7053045)
chr1 (132-257)||(45754513-45754637)
chr1 (149-261)||(13301841-13301953)
chr1 (132-259)||(24726379-24726505)
chr1 (130-261)||(38057522-38057651)
chr1 (218-261)||(4596810-4596853)
chr1 (18-85)||(12328606-12328673)
chr1 (218-261)||(20241873-20241916)
chr1 (218-261)||(22124195-22124238)
chr1 (218-261)||(48520244-48520287)
chr1 (149-261)||(21533971-21534081)
chr1 (193-257)||(21240164-21240228)
chr1 (218-261)||(22349649-22349693)
chr1 (218-261)||(42912094-42912137)
chr1 (218-261)||(44891635-44891678)
chr1 (220-261)||(13528762-13528804)
chr1 (132-261)||(42696773-42696901)
chr1 (213-261)||(14238499-14238548)
chr1 (218-259)||(16059279-16059320)
chr1 (220-261)||(18120611-18120652)
chr1 (220-261)||(24720763-24720804)
chr1 (192-261)||(28477652-28477721)
chr1 (159-259)||(52954436-52954535)
chr1 (218-261)||(19675795-19675838)
chr1 (220-261)||(17904018-17904060)
chr1 (224-258)||(51323372-51323406)
chr1 (220-257)||(14793392-14793429)
chr1 (228-261)||(14800439-14800472)
chr1 (228-261)||(14809313-14809346)
chr1 (218-261)||(20316366-20316410)
chr1 (218-261)||(50614285-50614329)
chr1 (218-261)||(50622113-50622157)
[»] scaffold0384 (1 HSPs)
scaffold0384 (1-194)||(8172-8365)
[»] scaffold0001 (3 HSPs)
scaffold0001 (18-258)||(76760-76991)
scaffold0001 (150-261)||(446396-446506)
scaffold0001 (219-259)||(497337-497377)
[»] scaffold0371 (3 HSPs)
scaffold0371 (20-253)||(2939-3163)
scaffold0371 (220-261)||(16658-16699)
scaffold0371 (194-258)||(11225-11290)
[»] scaffold0679 (1 HSPs)
scaffold0679 (18-203)||(2480-2664)
[»] scaffold0064 (1 HSPs)
scaffold0064 (131-261)||(57806-57936)
[»] scaffold0802 (1 HSPs)
scaffold0802 (18-147)||(5507-5636)
[»] scaffold0335 (1 HSPs)
scaffold0335 (18-147)||(777-906)
[»] scaffold0737 (4 HSPs)
scaffold0737 (18-261)||(6429-6673)
scaffold0737 (131-222)||(5577-5667)
scaffold0737 (138-211)||(5639-5712)
scaffold0737 (141-211)||(5751-5821)
[»] scaffold1137 (1 HSPs)
scaffold1137 (18-246)||(2425-2666)
[»] scaffold0507 (1 HSPs)
scaffold0507 (147-261)||(2768-2882)
[»] scaffold0009 (1 HSPs)
scaffold0009 (18-246)||(84994-85236)
[»] scaffold0116 (1 HSPs)
scaffold0116 (18-246)||(43917-44159)
[»] scaffold0026 (1 HSPs)
scaffold0026 (131-261)||(145793-145923)
[»] chr5 (46 HSPs)
chr5 (18-204)||(29915206-29915405)
chr5 (18-261)||(12122272-12122517)
chr5 (137-261)||(31454934-31455056)
chr5 (18-261)||(21555130-21555376)
chr5 (137-261)||(31455547-31455669)
chr5 (18-261)||(21557796-21558041)
chr5 (149-261)||(25743632-25743744)
chr5 (137-261)||(17875070-17875193)
chr5 (18-113)||(5889308-5889403)
chr5 (130-261)||(25250760-25250890)
chr5 (130-261)||(25314545-25314675)
chr5 (18-246)||(21741666-21741916)
chr5 (149-261)||(15796331-15796441)
chr5 (18-111)||(36460178-36460271)
chr5 (200-257)||(19920725-19920782)
chr5 (150-258)||(36509696-36509805)
chr5 (18-87)||(21871694-21871763)
chr5 (18-87)||(21875974-21876043)
chr5 (148-204)||(30615669-30615725)
chr5 (150-261)||(20470013-20470124)
chr5 (159-246)||(5889446-5889534)
chr5 (161-259)||(21406566-21406665)
chr5 (18-89)||(24212398-24212469)
chr5 (18-89)||(30615786-30615857)
chr5 (18-89)||(35852653-35852724)
chr5 (23-89)||(17875244-17875310)
chr5 (220-261)||(8504700-8504741)
chr5 (220-261)||(14026867-14026908)
chr5 (220-261)||(25742882-25742923)
chr5 (193-257)||(21618954-21619018)
chr5 (154-261)||(21731564-21731670)
chr5 (154-261)||(21809684-21809790)
chr5 (154-261)||(25575763-25575869)
chr5 (222-261)||(29914345-29914384)
chr5 (167-261)||(25578149-25578242)
chr5 (220-258)||(26761487-26761525)
chr5 (220-261)||(20198711-20198752)
chr5 (221-259)||(16227393-16227431)
chr5 (197-258)||(20565471-20565533)
chr5 (219-261)||(21330512-21330554)
chr5 (223-261)||(23469713-23469751)
chr5 (220-258)||(26749048-26749086)
chr5 (218-261)||(6551462-6551506)
chr5 (218-261)||(10953025-10953069)
chr5 (221-261)||(16605390-16605430)
chr5 (221-261)||(23202699-23202739)
[»] scaffold0004 (3 HSPs)
scaffold0004 (21-203)||(362795-362990)
scaffold0004 (221-261)||(109225-109265)
scaffold0004 (162-259)||(332230-332326)
[»] scaffold0071 (1 HSPs)
scaffold0071 (19-259)||(14198-14440)
[»] scaffold0810 (1 HSPs)
scaffold0810 (18-246)||(2791-3033)
[»] scaffold0434 (1 HSPs)
scaffold0434 (18-155)||(6810-6947)
[»] scaffold0045 (1 HSPs)
scaffold0045 (119-246)||(46923-47050)
[»] scaffold1351 (1 HSPs)
scaffold1351 (18-258)||(1425-1667)
[»] scaffold0035 (1 HSPs)
scaffold0035 (119-241)||(106316-106439)
[»] scaffold0061 (3 HSPs)
scaffold0061 (141-261)||(19320-19441)
scaffold0061 (18-120)||(15478-15579)
scaffold0061 (18-120)||(24536-24637)
[»] scaffold0100 (1 HSPs)
scaffold0100 (18-85)||(36181-36248)
[»] scaffold0790 (1 HSPs)
scaffold0790 (163-261)||(5945-6043)
[»] scaffold0513 (1 HSPs)
scaffold0513 (18-108)||(11002-11092)
[»] scaffold0054 (2 HSPs)
scaffold0054 (149-261)||(75928-76040)
scaffold0054 (220-258)||(65943-65981)
[»] scaffold0036 (1 HSPs)
scaffold0036 (197-261)||(78292-78356)
[»] scaffold1792 (2 HSPs)
scaffold1792 (145-246)||(141-243)
scaffold1792 (33-203)||(232-414)
[»] scaffold0230 (2 HSPs)
scaffold0230 (145-246)||(23657-23759)
scaffold0230 (33-203)||(23486-23668)
[»] scaffold0599 (2 HSPs)
scaffold0599 (18-111)||(205-298)
scaffold0599 (18-111)||(4623-4716)
[»] scaffold0395 (2 HSPs)
scaffold0395 (137-253)||(10759-10874)
scaffold0395 (18-114)||(10900-10996)
[»] scaffold0207 (1 HSPs)
scaffold0207 (161-261)||(15400-15500)
[»] scaffold0003 (1 HSPs)
scaffold0003 (119-258)||(95340-95479)
[»] scaffold0379 (2 HSPs)
scaffold0379 (126-261)||(4653-4787)
scaffold0379 (126-261)||(14699-14833)
[»] scaffold0075 (3 HSPs)
scaffold0075 (18-113)||(8417-8512)
scaffold0075 (132-259)||(60313-60439)
scaffold0075 (145-198)||(8605-8658)
[»] scaffold0040 (3 HSPs)
scaffold0040 (150-261)||(11048-11159)
scaffold0040 (150-261)||(22148-22259)
scaffold0040 (218-261)||(102061-102104)
[»] scaffold0439 (2 HSPs)
scaffold0439 (131-261)||(11221-11350)
scaffold0439 (220-261)||(3510-3551)
[»] scaffold0639 (1 HSPs)
scaffold0639 (146-203)||(7585-7642)
[»] scaffold0338 (1 HSPs)
scaffold0338 (150-261)||(11696-11807)
[»] scaffold0124 (1 HSPs)
scaffold0124 (26-113)||(24785-24872)
[»] scaffold0032 (1 HSPs)
scaffold0032 (141-259)||(63055-63173)
[»] scaffold0632 (1 HSPs)
scaffold0632 (131-204)||(282-353)
[»] scaffold0108 (3 HSPs)
scaffold0108 (150-261)||(5467-5579)
scaffold0108 (220-261)||(7876-7917)
scaffold0108 (218-261)||(3167-3210)
[»] scaffold0235 (5 HSPs)
scaffold0235 (145-204)||(13316-13375)
scaffold0235 (145-204)||(25017-25076)
scaffold0235 (19-113)||(13467-13561)
scaffold0235 (119-203)||(25065-25149)
scaffold0235 (124-203)||(13364-13443)
[»] scaffold0151 (1 HSPs)
scaffold0151 (174-261)||(24217-24304)
[»] scaffold0042 (2 HSPs)
scaffold0042 (131-261)||(47432-47562)
scaffold0042 (132-261)||(28331-28460)
[»] scaffold0098 (2 HSPs)
scaffold0098 (150-259)||(39169-39279)
scaffold0098 (159-204)||(34903-34948)
[»] scaffold0170 (2 HSPs)
scaffold0170 (150-258)||(2579-2688)
scaffold0170 (221-261)||(2866-2906)
[»] scaffold0065 (2 HSPs)
scaffold0065 (150-258)||(54925-55034)
scaffold0065 (218-261)||(53591-53635)
[»] scaffold0083 (3 HSPs)
scaffold0083 (132-259)||(807-934)
scaffold0083 (132-259)||(6111-6238)
scaffold0083 (132-261)||(11578-11707)
[»] scaffold0261 (2 HSPs)
scaffold0261 (18-105)||(18459-18546)
scaffold0261 (220-261)||(7439-7480)
[»] scaffold0203 (1 HSPs)
scaffold0203 (218-261)||(19106-19149)
[»] scaffold0107 (2 HSPs)
scaffold0107 (218-261)||(36090-36133)
scaffold0107 (221-259)||(10597-10635)
[»] scaffold0029 (1 HSPs)
scaffold0029 (145-204)||(74597-74656)
[»] scaffold0018 (1 HSPs)
scaffold0018 (150-261)||(7540-7651)
[»] scaffold0010 (2 HSPs)
scaffold0010 (218-261)||(557-600)
scaffold0010 (174-261)||(127329-127416)
[»] scaffold1815 (1 HSPs)
scaffold1815 (131-258)||(1078-1206)
[»] scaffold0716 (1 HSPs)
scaffold0716 (161-261)||(950-1050)
[»] scaffold0282 (1 HSPs)
scaffold0282 (218-258)||(18335-18375)
[»] scaffold0111 (3 HSPs)
scaffold0111 (205-261)||(7342-7398)
scaffold0111 (205-261)||(14461-14517)
scaffold0111 (218-261)||(19766-19809)
[»] scaffold0047 (2 HSPs)
scaffold0047 (169-261)||(78092-78184)
scaffold0047 (159-261)||(22189-22290)
[»] scaffold0815 (1 HSPs)
scaffold0815 (18-89)||(514-585)
[»] scaffold0301 (1 HSPs)
scaffold0301 (218-261)||(10881-10924)
[»] scaffold0293 (1 HSPs)
scaffold0293 (218-261)||(17413-17456)
[»] scaffold0077 (4 HSPs)
scaffold0077 (154-261)||(55787-55893)
scaffold0077 (218-261)||(14127-14171)
scaffold0077 (213-261)||(33466-33515)
scaffold0077 (218-257)||(2962-3002)
[»] scaffold0074 (2 HSPs)
scaffold0074 (218-261)||(8071-8114)
scaffold0074 (218-261)||(616-659)
[»] scaffold0056 (1 HSPs)
scaffold0056 (220-259)||(66076-66115)
[»] scaffold0037 (1 HSPs)
scaffold0037 (218-261)||(113611-113654)
[»] scaffold0011 (2 HSPs)
scaffold0011 (218-261)||(125677-125720)
scaffold0011 (219-261)||(38321-38363)
[»] scaffold0452 (1 HSPs)
scaffold0452 (219-261)||(13713-13755)
[»] scaffold0331 (1 HSPs)
scaffold0331 (151-261)||(13007-13116)
[»] scaffold0005 (1 HSPs)
scaffold0005 (159-261)||(14229-14330)
[»] scaffold0859 (1 HSPs)
scaffold0859 (220-261)||(3793-3834)
[»] scaffold0251 (1 HSPs)
scaffold0251 (220-261)||(20978-21019)
[»] scaffold0039 (1 HSPs)
scaffold0039 (174-258)||(10811-10896)
[»] scaffold0012 (1 HSPs)
scaffold0012 (220-261)||(221376-221417)
[»] scaffold1539 (2 HSPs)
scaffold1539 (218-261)||(558-602)
scaffold1539 (221-261)||(848-888)
[»] scaffold0149 (1 HSPs)
scaffold0149 (131-258)||(20704-20831)
[»] scaffold0142 (1 HSPs)
scaffold0142 (26-113)||(7779-7867)
[»] scaffold0020 (1 HSPs)
scaffold0020 (221-261)||(142491-142531)
[»] scaffold0019 (1 HSPs)
scaffold0019 (218-258)||(25771-25811)
[»] scaffold1283 (1 HSPs)
scaffold1283 (218-261)||(1541-1584)
[»] scaffold0505 (2 HSPs)
scaffold0505 (218-261)||(3731-3774)
scaffold0505 (220-261)||(1720-1761)
[»] scaffold0409 (2 HSPs)
scaffold0409 (150-257)||(284-391)
scaffold0409 (150-257)||(8539-8646)
[»] scaffold0051 (1 HSPs)
scaffold0051 (192-258)||(64926-64993)
[»] scaffold0914 (1 HSPs)
scaffold0914 (219-261)||(1610-1652)
[»] scaffold0708 (1 HSPs)
scaffold0708 (159-261)||(2522-2623)
[»] scaffold0586 (2 HSPs)
scaffold0586 (21-119)||(1887-1984)
scaffold0586 (133-204)||(1788-1860)
[»] scaffold0241 (2 HSPs)
scaffold0241 (197-258)||(1460-1522)
scaffold0241 (221-258)||(4627-4665)
[»] scaffold0220 (3 HSPs)
scaffold0220 (199-261)||(17463-17525)
scaffold0220 (197-261)||(12998-13063)
scaffold0220 (197-261)||(15816-15881)
[»] scaffold0117 (1 HSPs)
scaffold0117 (220-261)||(41193-41235)
[»] scaffold0046 (2 HSPs)
scaffold0046 (219-261)||(17086-17128)
scaffold0046 (219-261)||(26198-26240)
[»] scaffold1633 (1 HSPs)
scaffold1633 (228-261)||(324-357)
[»] scaffold0589 (1 HSPs)
scaffold0589 (132-261)||(3321-3449)
[»] scaffold0445 (1 HSPs)
scaffold0445 (218-259)||(2889-2930)
[»] scaffold0213 (1 HSPs)
scaffold0213 (220-261)||(18134-18175)
[»] scaffold0017 (1 HSPs)
scaffold0017 (220-261)||(25657-25698)
[»] scaffold1695 (1 HSPs)
scaffold1695 (193-261)||(432-500)
[»] scaffold0188 (1 HSPs)
scaffold0188 (220-259)||(605-645)
[»] scaffold0008 (1 HSPs)
scaffold0008 (149-261)||(136503-136615)
[»] scaffold2080 (1 HSPs)
scaffold2080 (218-261)||(926-969)
[»] scaffold1662 (1 HSPs)
scaffold1662 (218-261)||(386-429)
[»] scaffold0529 (1 HSPs)
scaffold0529 (220-258)||(7406-7445)
[»] scaffold0500 (1 HSPs)
scaffold0500 (218-261)||(7462-7505)
[»] scaffold0485 (1 HSPs)
scaffold0485 (218-261)||(10073-10116)
[»] scaffold0278 (1 HSPs)
scaffold0278 (218-261)||(7566-7609)
[»] scaffold0231 (1 HSPs)
scaffold0231 (221-260)||(18752-18791)
[»] scaffold0034 (1 HSPs)
scaffold0034 (218-261)||(117089-117132)
[»] scaffold0014 (1 HSPs)
scaffold0014 (218-261)||(206692-206735)
[»] scaffold0006 (2 HSPs)
scaffold0006 (218-261)||(96915-96958)
scaffold0006 (218-261)||(106193-106236)
[»] scaffold0002 (1 HSPs)
scaffold0002 (219-261)||(397547-397590)
[»] scaffold1223 (1 HSPs)
scaffold1223 (220-258)||(140-178)
[»] scaffold0123 (1 HSPs)
scaffold0123 (220-258)||(15985-16023)
[»] scaffold0106 (1 HSPs)
scaffold0106 (219-261)||(19816-19858)
[»] scaffold0081 (1 HSPs)
scaffold0081 (219-261)||(4864-4906)
[»] scaffold0072 (1 HSPs)
scaffold0072 (219-261)||(57727-57769)
[»] scaffold0048 (1 HSPs)
scaffold0048 (220-258)||(56106-56144)
[»] scaffold1256 (1 HSPs)
scaffold1256 (220-261)||(345-386)
[»] scaffold0546 (1 HSPs)
scaffold0546 (213-261)||(10911-10960)
[»] scaffold0520 (1 HSPs)
scaffold0520 (220-261)||(378-419)
[»] scaffold0396 (1 HSPs)
scaffold0396 (218-259)||(1807-1847)
[»] scaffold0328 (1 HSPs)
scaffold0328 (222-258)||(19603-19640)
[»] scaffold0113 (1 HSPs)
scaffold0113 (220-261)||(34338-34379)
[»] scaffold0112 (1 HSPs)
scaffold0112 (220-261)||(1893-1934)
[»] scaffold0109 (1 HSPs)
scaffold0109 (213-261)||(864-913)
[»] scaffold0090 (1 HSPs)
scaffold0090 (220-253)||(17332-17365)
[»] scaffold0063 (1 HSPs)
scaffold0063 (220-261)||(61799-61840)
[»] scaffold0059 (1 HSPs)
scaffold0059 (218-259)||(49083-49124)
[»] scaffold0028 (1 HSPs)
scaffold0028 (220-261)||(3981-4022)


Alignment Details
Target: chr3 (Bit Score: 245; Significance: 1e-136; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 40807262 - 40807002
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40807262 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgg 40807163  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  40807162 tgctgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 40807063  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40807062 tgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 40807002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 22307369 - 22307629
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22307369 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatgattatattggatgattattgttgatgttgacttgctgcatattatttaatgg 22307468  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22307469 tgctgccttgctgtcgtgatgaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 22307568  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22307569 tgtttaagttgtaagacgttgagtccatgcatactcattcaagttgagggcttgatgccct 22307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 17538373 - 17538113
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17538373 ttattaatgaagctatgttgtgaaagatgttgatatgaagttgtattgattatattggatgattattgttgatgttgacttgctgcatattatttaatgg 17538274  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  17538273 tgctgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgaaagatgttgatccaaattattggagtcatatgagatgtctaagt 17538174  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17538173 tgtttaagttgtaagacgttgactccatgcatactcatttaagttgagggcttgatgccct 17538113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 30175318 - 30175560
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg 118  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  30175318 tgtgaaagatgttgatatgaagttgtaatggatatatgggatgattattgttgatgttgacttgcttcatattatttaatggtgttgccttgctgtcgtg 30175417  T
Q  119 attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacg 218  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      
T  30175418 attaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagatt 30175517  T
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  30175518 ttgagtccatgcttactcatttaagttgagggcttgatgccct 30175560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 5842030 - 5841846
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||    
T  5842030 ttgtgaaagatgctcataagaagttgtaatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatagtgttgttttgctgtcgt 5841931  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  5841930 gattaggatgctaatgttggtctaagttgtttaaattgtaagattttgatccaaattattggagtcatatgaga-gtctaagttgt 5841846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 17519827 - 17519951
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactc 236  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17519827 gtctaagttgtttaagttataagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgcatactc 17519926  T
Q  237 atttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||    
T  17519927 atttaagttgagggcttgatgccct 17519951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 17534689 - 17534813
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactc 236  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17534689 gtctaagttgtttaagttataagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgcatactc 17534788  T
Q  237 atttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||    
T  17534789 atttaagttgagggcttgatgccct 17534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 41173235 - 41173363
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41173235 atgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgc 41173334  T
Q  231 atactcatttaagttgagggcttgatgcc 259  Q
    ||||||||||| |||||||||| ||||||    
T  41173335 atactcatttacgttgagggctagatgcc 41173363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 5215053 - 5214924
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  5215053 atgttggtc-aagttgttaaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagtcgttgagtccatgc 5214955  T
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||||    
T  5214954 atactcatttaagttgagggcttgatgccct 5214924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 40811928 - 40811817
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40811928 aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagg 40811829  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  40811828 gcttgatgccct 40811817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 17693264 - 17693133
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  17693264 atgttggtctaagttgtttaagttgtaagatgttaatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagttgttgagtccatgc 17693165  T
Q  231 atactcattt-aagttgagggcttgatgccct 261  Q
    | |||||||| |||||||||||||||||||||    
T  17693164 acactcatttgaagttgagggcttgatgccct 17693133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 49970003 - 49970178
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||    
T  49970003 ttgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatggtactgccttgctgttgt 49970102  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattgga 180  Q
    |             |||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  49970103 gatgtattattatcattaagatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaagtattgga 49970178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 134 - 259
Target Start/End: Original strand, 5206521 - 5206647
Alignment:
Q  134 ttggtctaagttgtttaagtt-gtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcat 232  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  5206521 ttggtctaagttgtttaaatttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttttttaagttgtaagacgttaagtccatgcat 5206620  T
Q  233 actcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||||||    
T  5206621 actcatttaagttgagggcttgatgcc 5206647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 15932371 - 15932500
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||    
T  15932371 atgttggtc-aagttgtttaaattgtaagatgttgatccaaattattggagtcatatgagatgtttaagttgtttaagttgtaacacgttgagtcaatgc 15932469  T
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||||    
T  15932470 atactcatttaagttgagggcttgatgccct 15932500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 20630230 - 20630427
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| ||| |||||||||||||  ||    
T  20630230 ttgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatgttgttgccttgctgatgt 20630329  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttg 202  Q
    |             |||| |||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  20630330 gatgtattaatatcattaagatgctaatgtttgtttaagttgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg 20630427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 1465544 - 1465785
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||||||||| |||||||||  ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||  || ||    
T  1465544 ttgtgaaagatgcttatatgaagtcgtaatggttggatttgacgattattgttgatgttgacttgctgcatattatttaatggtgttgccttgtggttgt 1465643  T
Q  118 g----------attaggatg--ctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgttt 205  Q
    |          || | || |  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  1465644 ggcgtattaatatcatgaagatctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg-tt 1465742  T
Q  206 aagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    ||||||  |||| |||||||||| |||||||||||||| ||||    
T  1465743 aagttgttaagatgttgagtccattgcatactcatttacgttg 1465785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 204
Target Start/End: Complemental strand, 12269547 - 12269359
Alignment:
Q  29 gttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg---------- 118  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||| || ||||| |||||||||||| ||||||              
T  12269547 gttgatatgaagttgtaatgattatatttgatgattattgttgatgttgacgtgctgcatattagttaatagtgttgccttgcagtcgtggtctattaat 12269448  T
Q  119 ---attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
       |||| | |||||||||| || |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  12269447 atcattaaggtgctaatgttagtataagttgtttaagttgtaaggtgttgatccaaattattggagtcatatgagatgtctaagttgtt 12269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 14508039 - 14507910
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| |||||||| |||||||| ||||||||  ||||||||||||||||||| |||| | |||||||||||||||| ||||||||||||||||||    
T  14508039 atgttggtc-aagttgttaaagttgtaagatgttgaatcaaattattggagtcatataagatatttaagttgtttaagttgtaagacgttgagtccatgc 14507941  T
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||||    
T  14507940 atactcatttaagttgagggcttgatgccct 14507910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 19 - 261
Target Start/End: Original strand, 31224706 - 31224950
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg 118  Q
    ||||||||| ||||||||||||||||||| |||||||  |||||||||| |||||| ||||||||||||||   || |||| ||||| |||||||| |||    
T  31224706 tgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgtg 31224805  T
Q  119 at----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaa 214  Q
    ||    ||  |   | | | || | ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | ||    
T  31224806 atgaattaataccattaagatgtt-taagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgtaa 31224902  T
Q  215 gacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    || |||||||||| |||||||||||||||||||||||||| |||||||    
T  31224903 gatgttgagtccattgcatactcatttaagttgagggcttaatgccct 31224950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 246
Target Start/End: Original strand, 49389813 - 49390045
Alignment:
Q  28 tgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg--------- 118  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | | ||||| |||||||||||||||||  |||             
T  49389813 tgttgatatgaagttgtaattgttatatttgatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgctgatgtgatgtgttaa 49389912  T
Q  119 ----attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-ca 213  Q
        |||| |||| |||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||  |    
T  49389913 tatcattaagatgttaatgttggtttaagttgtttaagttataagatgttggtccaaattattggagtcataagagatgtctaagttg-ttaagttgtta 49390011  T
Q  214 agacgttgagtcca-tgcatactcatttaagttg 246  Q
    ||| ||||||| || |||||||||||||| ||||    
T  49390012 agatgttgagttcattgcatactcatttacgttg 49390045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 40812087 - 40811949
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||    
T  40812087 ttgtgaaagatgttgatatgaagttgtaatggttatatgggatgattattgttgatgttgacttgctgcatattatttaatggtgctgctttgctttcgt 40811988  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgta 157  Q
    ||||| | ||   ||||||||| |||||||| ||||||||    
T  40811987 gattaagttgtatatgttggtc-aagttgttaaagttgta 40811949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 18439980 - 18440223
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |||| ||||| | | ||||| ||||||||| |||||||  ||    
T  18439980 ttgtgaaagatgatgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacctgctgtaaattatttgatggtgttgtcttgctgaggt 18440079  T
Q  118 gat-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgag-atgtctaagttgt 203  Q
    |||             || ||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||| ||| ||||||||||||     
T  18440080 gatgtattaatatcattaagatgctaatgttggtttaagttgtttaagttataagatgttggtccaaattattggagtcataagagaatgtctaagttg- 18440178  T
Q  204 ttaagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    ||||||||  |||| |||||||||| |||||||||||||| ||||    
T  18440179 ttaagttgttaagatgttgagtccattgcatactcatttacgttg 18440223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 259
Target Start/End: Original strand, 15447752 - 15447991
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg 118  Q
    ||||||||| ||||||||||||||||||| |||||||   ||||||||| |||||| ||||||| ||||||   || |||| ||||| |||||||| |||    
T  15447752 tgtgaaagacgttgatatgaagttgtaattgttatat---atgattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtg 15447848  T
Q  119 at----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaa 214  Q
    ||    ||  |   | | | || ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||    
T  15447849 atgaattaataccattaagatg-tctaagttgtt-aagttgtaagatattgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgtaa 15447945  T
Q  215 gacgttgagtcca-tgcatactcatttaagttgagggcttgatgcc 259  Q
    || |||||||||| ||||||||||||||||||||||||||||||||    
T  15447946 gatgttgagtccattgcatactcatttaagttgagggcttgatgcc 15447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 31415505 - 31415265
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| |||||| ||||||||||||||   || |||| ||||| |||||||| ||    
T  31415505 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgt 31415406  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |    
T  31415405 gatgaattaataccattaagatg-tctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgta 31415309  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||| |||||||||| |||||||||||     ||||||||||||||||||    
T  31415308 agatgttgagtccattgcatactcat-----ttgagggcttgatgccct 31415265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 13516529 - 13516400
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tg 229  Q
    ||||||||| |||||||  |||||||| ||| ||||||||||||||||||||||||||||||||| |||||| |||||| | |||| |||||||||| ||    
T  13516529 atgttggtcaaagttgtc-aagttgtaagattttgatccaaattattggagtcatatgagatgtccaagttg-ttaagtcgtaagatgttgagtccattg 13516432  T
Q  230 catactcatttaagttgagggcttgatgccct 261  Q
    |||||| |||||||||||||||||||||||||    
T  13516431 catacttatttaagttgagggcttgatgccct 13516400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 130 - 261
Target Start/End: Complemental strand, 37427746 - 37427616
Alignment:
Q  130 aatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatg 229  Q
    ||||| ||||||||||||  ||||  || ||||||| |||||| |||||||||||||| ||||||| | ||||| |||| || |||  ||||||||||||    
T  37427746 aatgtcggtctaagttgtg-aagtgttaagatgttgttccaaaatattggagtcatataagatgtcgatgttgtctaagctgtaagttgttgagtccatg 37427648  T
Q  230 catactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||    
T  37427647 catactcatttaagttgagggcttgatgccct 37427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 11913022 - 11912929
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgc 111  Q
    |||||||||| ||||||||||| ||||||| |||||||  ||| |||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  11913022 ttgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgccttgc 11912929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 17519784 - 17519844
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagtt 210  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17519784 aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagtt 17519844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 17534646 - 17534706
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagtt 210  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17534646 aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagtt 17534706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 23413557 - 23413640
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgc-aagacgttgagtccat 228  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| | || |||||||||||    
T  23413557 tgtttaagttgtatgatgttgatccaaattattggagtcataagagatgtctaagttg-ttaagttgctaggatgttgagtccat 23413640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 85
Target Start/End: Original strand, 1988984 - 1989050
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctg 85  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  1988984 tgtgaaagttgttgatatgaagttgtaatggttgtatttgatgattattgttgatgttgacttgctg 1989050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 204
Target Start/End: Complemental strand, 14501120 - 14500923
Alignment:
Q  20 gtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg- 118  Q
    ||||| |||| ||||||||||||||||||  | |||| ||||||||||||||||||||||||| |||| | ||| | ||| ||||||||||||   |||     
T  14501120 gtgaatgatgatgatatgaagttgtaatgaatgtatttgatgattattgttgatgttgacttgttgcaaattatatgatgttgttgccttgctaatgtga 14501021  T
Q  119 ------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
                |||| ||||||||||||||| ||||| |||| |||| || ||||| |  |||| |||||||||||||| |||||||||||||||||    
T  14501020 tatattaatatcattaagatgctaatgttggtttaagtcgtttgagttataagatgtcggcccaatttattggagtcataagagatgtctaagttgtt 14500923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 45796980 - 45796919
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgttta 206  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  45796980 tgtttaatttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgttta 45796919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 42353471 - 42353598
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| |||||||  |||||||| | ||||  |||||  ||||||||||||||||| |||  ||||||| ||||||| |||  ||||||| |||||    
T  42353471 atgttggtcaaagttgtc-aagttgtaagttgttattccaagatattggagtcatatgagttgttgaagttgtctaagttgtaagttgttgagtacatgc 42353569  T
Q  231 atactcattt-aagttgagggcttgatgc 258  Q
    |||||||||| ||||||||||||||||||    
T  42353570 atactcatttgaagttgagggcttgatgc 42353598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 45797166 - 45796969
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||| |||| ||||||||||||||||||  | |||| ||||||||||||||||||||||||| |||| | ||| | ||| |||||||||||||  ||    
T  45797166 ttgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgattattgttgatgttgacttgttgca-attatatgatgttgttgccttgctgatgt 45797068  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |             |||| ||||||||||||||| ||||| |||| |||| || ||||| |  |||| |||||||||||||||||||||| ||| ||||    
T  45797067 gatatattaatatcattaagatgctaatgttggtttaagtcgtttgagttataagatgtcggcccaatttattggagtcatatgagatgtttaatttgt 45796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 204
Target Start/End: Original strand, 52466418 - 52466484
Alignment:
Q  139 ctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtc-taagttgtt 204  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  52466418 ctaagctgttcaagttgtaagatgttgatccaaattattggagtcatatgagatgtcttaagttgtt 52466484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 12852499 - 12852587
Alignment:
Q  26 gatgttgatatgaagtt-gtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    |||| |||||||||||| |||||| || |||| |||||||||||||||||||||||||||| | | ||||| ||| |||||||||||||    
T  12852499 gatgatgatatgaagtttgtaatgattgtatttgatgattattgttgatgttgacttgctgtaaattatttgatgttgttgccttgctg 12852587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 17044169 - 17044102
Alignment:
Q  194 tctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||   |  | ||||||||||||||||||||||||||||||||||||||||||    
T  17044169 tctaagttgtttaagttgttggttgctgagtccatgcatactcatttaagttgagggcttgatgccct 17044102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 45531530 - 45531616
Alignment:
Q  176 ttggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatt-taagttgagggcttgatgccct 261  Q
    ||||||||||||||| |||  ||||||| ||||||| |||  | ||||||||||||||||||||  |||||||||||||||||||||    
T  45531530 ttggagtcatatgagttgttgaagttgtctaagttgtaagttgctgagtccatgcatactcattggaagttgagggcttgatgccct 45531616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 14153376 - 14153461
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||||||||| ||||| |||  |||||||  |||||| |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  14153376 tattggagtcacatgagttgttgaagttgtccaagttgtaagttgttgagtccatgcatactcatttgaagttgagggcttgatgc 14153461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 17259167 - 17259232
Alignment:
Q  194 tctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    ||||||||||||||||||   |  ||||||||||||||||||||||||| ||||||||||||||||    
T  17259167 tctaagttgtttaagttgttggttgttgagtccatgcatactcatttaaattgagggcttgatgcc 17259232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 19569277 - 19569318
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19569277 tgagtccatgcatactcatttaagttgagggcttgatgccct 19569318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 16728453 - 16728341
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatt-taagttgag 248  Q
    |||||||| | ||||| |||||  ||||||||||| ||||| |||  ||||||| ||||||| |||  | ||||||||||||||||||||  ||||||||    
T  16728453 aagttgtaagttgttgttccaagatattggagtcacatgagttgttgaagttgtctaagttgtaagttgctgagtccatgcatactcattcaaagttgag 16728354  T
Q  249 ggcttgatgccct 261  Q
    || ||||||||||    
T  16728353 ggtttgatgccct 16728341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 261
Target Start/End: Complemental strand, 324083 - 323967
Alignment:
Q  143 gttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaa 242  Q
    ||||| ||||||||| | ||| | |||||| |||||||||| ||  || |||| | |||||  ||||||||||  |||||||||||||||||||||| |     
T  324083 gttgtctaagttgtaagttgtcgttccaaagtattggagtctta--agttgtcgatgttgtccaagttgcaagttgttgagtccatgcatactcattcat 323986  T
Q  243 gttgagggcttgatgccct 261  Q
    |||| ||||||||||||||    
T  323985 gttgggggcttgatgccct 323967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 2842417 - 2842460
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  2842417 gttgagtccatgcatactcatttacgttgagggcttgatgccct 2842460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 9577578 - 9577535
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  9577578 gttgagtccatgcatactcatttaagttgggggcttgatgccct 9577535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 16044537 - 16044426
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||  ||||||| ||| || || |||  ||||||| ||||||| |||  | ||||||||||| ||| ||||||||||||||    
T  16044537 aagttgtaagttgttgttccaagatattggaatcacataagttgttgaagttgtctaagttgtaagttgctgagtccatgcgtacccatttaagttgagg 16044438  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  16044437 gcttgatgccct 16044426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 16059396 - 16059285
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||  ||||||| |||||| || |||  ||||||| ||||||| |||  | ||||||||||  ||| ||||||||||||||    
T  16059396 aagttgtaagttgttgttccaagatattggaatcatataagttgttgaagttgtctaagttgtaagttgctgagtccatgtgtacccatttaagttgagg 16059297  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  16059296 gcttgatgccct 16059285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 254
Target Start/End: Complemental strand, 20417260 - 20417138
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaa-gttgcaagacgttgagtccatgc 230  Q
    |||||||||||||||   |||||||| | ||||| |||||  ||||||||||||||| | |||  |||||||  || |||| |||  | |||||||||||    
T  20417260 tgttggtctaagttgca-aagttgtaagttgttgttccaagatattggagtcatatgggttgttgaagttgtccaaagttgtaagttgctgagtccatgc 20417162  T
Q  231 atactcatttaagttgagggcttg 254  Q
    ||||||||||||||||||||||||    
T  20417161 atactcatttaagttgagggcttg 20417138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 316131 - 316030
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||||| |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| |||||||||||    
T  316131 gatgttgttccaaattattggagttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggcttgatgc 316033  T
Q  259 cct 261  Q
    |||    
T  316032 cct 316030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 6155737 - 6155696
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  6155737 tgagtccatgcatactcattaaagttgagggcttgatgccct 6155696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 11192050 - 11192009
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  11192050 tgagtccatgcatactcattaaagttgagggcttgatgccct 11192009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 14519482 - 14519413
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||| ||||||   |  || ||||||||||||||||||| |||||||||||||||||||||    
T  14519482 tgtctaagttgttaaagttgatggttgtcgagtccatgcatactcattaaagttgagggcttgatgccct 14519413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 16050013 - 16049904
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||  ||||||| |||||| || |||  ||||||| ||||||| |||  | ||||||||||| ||| ||||||||||||||    
T  16050013 aagttgtaagttgttgttccaagatattggaatcatataagttgttgaagttgtctaagttgtaagttgctgagtccatgcgtacccatttaagttgagg 16049914  T
Q  250 gcttgatgcc 259  Q
    |||| |||||    
T  16049913 gcttcatgcc 16049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 46752049 - 46751964
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    |||||||||||||| || |||  | |||||  |||||| |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  46752049 tattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatactcatttgaagttgagggcttgatgc 46751964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 13026638 - 13026682
Alignment:
Q  218 gttgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  13026638 gttgagtccattgcatactcatttaagttgagggcttgatgccct 13026682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 13031727 - 13031771
Alignment:
Q  218 gttgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  13031727 gttgagtccattgcatactcatttaagttgagggcttgatgccct 13031771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 23413372 - 23413436
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttg 82  Q
    ||||||| |||| |||||||||||||||||| || |||| |||||||| |||||| |||||||||    
T  23413372 ttgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattactgttgacgttgacttg 23413436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 14642507 - 14642550
Alignment:
Q  219 ttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  14642507 ttgagtccatgcatactcatttgaagttgagggcttgatgccct 14642550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 18700663 - 18700706
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||    
T  18700663 gttgagttcatgcatactcatttaagttgggggcttgatgccct 18700706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 19884488 - 19884531
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  19884488 gttgagtccatgcatactcatttacgttgagggcttaatgccct 19884531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 35065545 - 35065588
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| ||||||||| |||||||||    
T  35065545 gttgagtccatgcatactcatttacgttgagggcctgatgccct 35065588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 53646836 - 53646903
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcat-ttaagttgagggcttgatgc 258  Q
    ||||||||||||||||||||   |  | ||||||||||||||||||| ||||||||||||||||||||    
T  53646836 tgtctaagttgtttaagttgttggttggtgagtccatgcatactcatattaagttgagggcttgatgc 53646903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 15206887 - 15206845
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  15206887 ttgagtccatgcatactcattaaagttgggggcttgatgccct 15206845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 261
Target Start/End: Complemental strand, 17207262 - 17207192
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaa-gttgagggcttgatgccct 261  Q
    ||||||||||||| ||||||   |  ||||||||||||||||||||| ||| |||||||||||||||||||    
T  17207262 tgtctaagttgttaaagttgttggttgttgagtccatgcatactcatctaaagttgagggcttgatgccct 17207192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 17548519 - 17548561
Alignment:
Q  220 tgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  17548519 tgagtccattgcatactcatttaagttgagggcttgatgccct 17548561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 42327254 - 42327316
Alignment:
Q  198 agttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgcc 259  Q
    |||||||||||||| | |  ||||||| ||||||||||||||| |||||||||||||||||||    
T  42327254 agttgtttaagttgtacgttgttgagttcatgcatactcatttgaagttgagggcttgatgcc 42327316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 258
Target Start/End: Original strand, 50348996 - 50349094
Alignment:
Q  161 tgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||| |||||  |||||||||||||| || |||  | |||||  |||||| |||  |||||||||||||||| |||||| ||||||||||||||||||    
T  50348996 tgttgttccaagatattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatattcatttgaagttgagggcttgatgc 50349094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 24545728 - 24545691
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||||||||||||||| |||||||||||||||||    
T  24545728 tgagtccatgcatactcattaaagttgagggcttgatg 24545691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 44269616 - 44269575
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||| ||||||||||| |||||    
T  44269616 gttgagtccatgcatactcatttacgttgagggctttatgcc 44269575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 11258526 - 11258486
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  11258526 gttgagtccatgcatactcatttacgttgaaggcttgatgc 11258486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 12512775 - 12512819
Alignment:
Q  218 gttgagtccatgcatactca-tttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12512775 gttgagtccatgcatactcattttaagttgagggattgatgccct 12512819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 257
Target Start/End: Complemental strand, 6158492 - 6158453
Alignment:
Q  219 ttgagtccatgcatactcattt-aagttgagggcttgatg 257  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  6158492 ttgagtccatgcatactcatttgaagttgagggcttgatg 6158453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 6808238 - 6808175
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgactt 81  Q
    |||||||||| ||||||||||| ||||||| |||||||   ||||||||| |||||| ||||||    
T  6808238 ttgtgaaagacgttgatatgaaattgtaattgttatatataatgattattattgatggtgactt 6808175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 13919282 - 13919239
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  13919282 gttgagtccatgcatactcattcatgttgggggcttgatgccct 13919239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 43889972 - 43890015
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||| |||| ||||||||||||||||| ||||||||||||||    
T  43889972 gttgagaccatacatactcatttaagttgggggcttgatgccct 43890015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 15245969 - 15245927
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||    
T  15245969 ttgagtccatgcatacttattaaagttgggggcttgatgccct 15245927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 15265090 - 15265048
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||    
T  15265090 ttgagttcatgcatactcatttaagttgggggcttgataccct 15265048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 257
Target Start/End: Original strand, 23318883 - 23318921
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  23318883 ttgagtccatgcatactcattaaagttgggggcttgatg 23318921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 50756324 - 50756362
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  50756324 tgagtccatgcataatcattaaagttgagggcttgatgc 50756362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 257
Target Start/End: Complemental strand, 10562869 - 10562772
Alignment:
Q  161 tgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatg 257  Q
    ||||| |||||  |||||||||||||| || |||  | |||||  |||||| | |  ||||||||| ||||||||||||| |||||||||||||||||    
T  10562869 tgttgttccaagatattggagtcatataagttgttgatgttgtccaagttgtatgttgttgagtccttgcatactcatttgaagttgagggcttgatg 10562772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 11886633 - 11886670
Alignment:
Q  222 agtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    ||||||||||||||||| || |||||||||||||||||    
T  11886633 agtccatgcatactcatatatgttgagggcttgatgcc 11886670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 141 - 261
Target Start/End: Complemental strand, 15565652 - 15565534
Alignment:
Q  141 aagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt 240  Q
    ||||||| || ||| |||| ||||| |||||| |||||||||| ||| || |||  | |||||  |||||| | |  || ||||||||||||||  ||||    
T  15565652 aagttgtctatgttatatgttgttgttccaaagtattggagtcgtataagttgttgatgttgtccaagttgtatgttgtcgagtccatgcatac--attt 15565555  T
Q  241 aagttgagggcttgatgccct 261  Q
    ||||| |||||||||||||||    
T  15565554 aagttaagggcttgatgccct 15565534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 23413485 - 23413568
Alignment:
Q  119 attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |||| ||||||||||||| | |||||  ||| |||| || ||||| |  |||||||||||||||||| |||||||| ||||||||    
T  23413485 attaagatgctaatgttgtt-taagtcatttgagttataagatgtcggcccaaattattggagtcatttgagatgtttaagttgt 23413568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 37037913 - 37037873
Alignment:
Q  219 ttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  37037913 ttgagtccatgcataatcatttgaagttgagggcttgatgc 37037873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 18708766 - 18708506
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  18708766 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgtttatgttgacttgctgcatattatttaatgg 18708667  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18708666 tgatgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 18708567  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18708566 tgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 18708506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 23151052 - 23151286
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  23151052 ttattaattatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttaatgttgacttgctgcatattatttaatgg 23151151  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  23151152 tgctgccttgctatcgtgattaggatgctaatgttggtctaagttgtttaagtcgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 23151251  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatact 235  Q
    |||||| |||| |||||||||||||||||||||||    
T  23151252 tgtttatgttgtaagacgttgagtccatgcatact 23151286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 28708723 - 28708539
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||    
T  28708723 ttgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatagtgttgttttgctgtcgt 28708624  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  28708623 gattaggatgctaatgttggtctaagttgtttaaattgtaagattttgatccaaattattggagtcatatgaga-gtctaagttgt 28708539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 27322204 - 27322351
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27322204 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgg 27322303  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtt 148  Q
     | | ||||| ||||| |||||||||||||||||||||||||||||||    
T  27322304 ggctaccttgttgtcgcgattaggatgctaatgttggtctaagttgtt 27322351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 18927925 - 18927796
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  18927925 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttgctgtcgt 18927826  T
Q  118 gattaggatgctaatgttggtctaagttgt 147  Q
    ||||||||||||||||||||||||||||||    
T  18927825 gattaggatgctaatgttggtctaagttgt 18927796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 17318986 - 17319113
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  17318986 atgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgt 17319085  T
Q  231 atactcatttaagttgagggcttgatgc 258  Q
    ||||||||||||||||||||||||||||    
T  17319086 atactcatttaagttgagggcttgatgc 17319113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 142 - 261
Target Start/End: Original strand, 27323545 - 27323664
Alignment:
Q  142 agttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattta 241  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  27323545 agttgtttaagttgtaagatgttgatccaaattattggcgtcatatgagatgtctaagttgtttaagttgtaagatgttgagtccatgcatactcattta 27323644  T
Q  242 agttgagggcttgatgccct 261  Q
    ||||||||| ||||||||||    
T  27323645 agttgagggtttgatgccct 27323664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 19399859 - 19399684
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||  ||||||||| | ||    
T  19399859 ttgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatggttctgccttgcttttgt 19399760  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattgga 180  Q
    |             |||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19399759 gatgtattattatcattaagatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaagtattgga 19399684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 25956754 - 25956996
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| | | ||||| ||| |||||||||||||  ||    
T  25956754 ttgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctgtaaattatttgatgatgttgccttgctgatgt 25956853  T
Q  118 gat-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||             || ||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||||||| |    
T  25956854 gatgtattaatatcattaagatgctaatgttggtttaagttgtttaagttataagatgttggtccaaattattggagtcataagagatgtctaagttg-t 25956952  T
Q  205 taagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||  |||| |||||||||| |||||||||||||| ||||    
T  25956953 taagttgttaagatgttgagtccattgcatactcatttacgttg 25956996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 145 - 241
Target Start/End: Complemental strand, 31733836 - 31733740
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattta 241  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31733836 tgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgcatactcattta 31733740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 20734198 - 20734442
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||| ||||||||||||||   || |||||||||| |||||||| ||    
T  20734198 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatggtgttgtcttgctgttgt 20734297  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || || |||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||   |    
T  20734298 gatgaattaataccattaagatg-tc-aagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatatctaagttg-ttaagtcata 20734393  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||| |||||||||| ||||||||||||||||||||||| ||||||||||    
T  20734394 agatgttgagtccattgcatactcatttaagttgagggtttgatgccct 20734442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 20136691 - 20136579
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| ||||||| |||||| | |||||||||||| ||||||| | ||||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  20136691 taagatgtaagatgttgttccaaaatgttggagtcatataagatgtcgatgttgtctaagttgtaagatgttgagtccatgcatactcatttaagttgag 20136592  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  20136591 ggcttgatgccct 20136579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 22196178 - 22196290
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| ||||||| |||||| | |||||||||||| ||||||| | ||||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  22196178 taagatgtaagatgttgttccaaaatgttggagtcatataagatgtcgatgttgtctaagttgtaagatgttgagtccatgcatactcatttaagttgag 22196277  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  22196278 ggcttgatgccct 22196290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 23528201 - 23528313
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| |||||||||||||| |||||||||||||| ||||||  | | ||| ||||||| |||| ||||||| |||||||||||||||||||||||    
T  23528201 taagatgtaagatgttgatccaaactattggagtcatataagatgttcatgatgtctaagttgtaagatgttgagttcatgcatactcatttaagttgag 23528300  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  23528301 ggcttgatgccct 23528313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 27851156 - 27850966
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| ||||||||||||||| ||||| |||| |||||||||||| ||||||||||||||||| | ||||| ||||||||||||| |||  ||    
T  27851156 ttgtgaaagatgctgatatgaagttgtattggttgtatttgatgattattgtcgatgttgacttgctgcaaattatttgatggtgttgccttactgatgt 27851057  T
Q  118 g----attaggatgctaatgttggtctaa-gtt-gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |    ||||  ||  | | | ||  |||| ||| |||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  27851056 gatgtattaatatcattaagatg--ctaatgttggtttaagttgtaagatgttggtccaaattattggagtcatacgagatgtctaagttgtt 27850966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 31630660 - 31630752
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttg 110  Q
    ||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| | | ||||| ||||||||| ||||    
T  31630660 ttgtgaaagatgttgatatgaagttataatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgtcttg 31630752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 34297020 - 34297113
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgc 111  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| || |||||||||||||||||| |||||||||||||| ||||||    
T  34297020 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattaatgttgacttgctgcatattatttaatggtgtttccttgc 34297113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 258
Target Start/End: Complemental strand, 23538670 - 23538580
Alignment:
Q  168 ccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||  ||| |||| |||||| ||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  23538670 ccaaattattggaaccatttgagttgtctacgttgtctaagttgtaagatgttgagtccatgcatactcatataagttgagggcttgatgc 23538580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 31733896 - 31733825
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  31733896 atgttggtc-aagttgttaaagttgtaagatgttgatccaaattattggagtcatatgagatgtttaagttgt 31733825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 22212379 - 22212506
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||| ||||||||| |  |||| |||||| | ||||||| |||| ||||||  | |||||  | |||| |||  |||||||||| |||    
T  22212379 tgttggtctaagttgtctaagttgtaagtcgttgttccaaagttttggagttatataagatgttgatgttgtgcatgttgtaagttgttgagtccacgca 22212478  T
Q  232 tactcatttaagttgagggcttgatgcc 259  Q
    ||||||||||||||||||||||||||||    
T  22212479 tactcatttaagttgagggcttgatgcc 22212506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 260
Target Start/End: Complemental strand, 15895940 - 15895839
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||| |||||||||||||| || |||| | |||||  |||||| |||  | |||||||||||||||||||| ||||||||||||||||||    
T  15895940 gatgttgttccaaagtattggagtcatataagttgtcgatgttgtccaagttgtaagttgctgagtccatgcatactcattcaagttgagggcttgatgc 15895841  T
Q  259 cc 260  Q
    ||    
T  15895840 cc 15895839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 257
Target Start/End: Complemental strand, 16245358 - 16245249
Alignment:
Q  148 ttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttga 247  Q
    |||||||||| ||||||| |||||| ||||||| |||||| || |||| | |||||  |||||| |||  |||||||||||||||||||||| |||||||    
T  16245358 ttaagttgtaagatgttgttccaaagtattggattcatataagttgtccatgttgtccaagttgtaagttgttgagtccatgcatactcattcaagttga 16245259  T
Q  248 gggcttgatg 257  Q
    ||| ||||||    
T  16245258 gggtttgatg 16245249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 18204099 - 18203989
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| |||||||||||||||| ||||| |||||  ||||||  | ||| | ||||||| |||| |||||||||||||||||||||||| ||||||    
T  18204099 taagatgtaagatgttgatccaaatttttggaatcata--agatgttgaggttttctaagttgtaagatgttgagtccatgcatactcatttatgttgag 18204002  T
Q  249 ggcttgatgccct 261  Q
    || ||||||||||    
T  18204001 ggtttgatgccct 18203989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 258
Target Start/End: Original strand, 19829822 - 19829948
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| ||||||| |||||| |||||||||||||| || |||  | |||||  |||||| |||  |||||||| |||||    
T  19829822 tgttggtctaagttgta-aagttgtaagatgttgttccaaagtattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtctatgca 19829920  T
Q  232 tactcattt-aagttgagggcttgatgc 258  Q
    |||| |||| ||||||||||||||||||    
T  19829921 tacttatttgaagttgagggcttgatgc 19829948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 261
Target Start/End: Complemental strand, 17105696 - 17105603
Alignment:
Q  168 ccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||  ||| |||| ||| || ||||| || || | |||  ||||||||||||||||||||||||||||||||||||||||||||    
T  17105696 ccaaattattggaaccatttgagttgtttacgttgtctacgtcgtaagttgttgagtccatgcatactcatttaagttgagggcttgatgccct 17105603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 23500768 - 23500700
Alignment:
Q  193 gtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||   |  |||||||||||||||||||||| |||||||||||||||||||||    
T  23500768 gtctaagttgtttaagttgttggttgttgagtccatgcatactcattaaagttgagggcttgatgccct 23500700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 2201220 - 2201149
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||| ||||||||||||||    
T  2201220 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcata 2201149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 19656303 - 19656346
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19656303 gttgagtccatgcatactcatttaagttgagggcttgatgccct 19656346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 27573267 - 27573310
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27573267 gttgagtccatgcatactcatttaagttgagggcttgatgccct 27573310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 18177772 - 18177882
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| |||||||||||||||| ||||| |||||  ||||||  | ||| | || |||| |||| ||||||| |||||||||||||||| ||||||    
T  18177772 taagatgtaagatgttgatccaaatttttggaatcata--agatgttgaggttttctacgttgtaagatgttgagtgcatgcatactcatttatgttgag 18177869  T
Q  249 ggcttgatgccct 261  Q
    || ||||||||||    
T  18177870 ggtttgatgccct 18177882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 20411669 - 20411778
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| ||||||| |||||| ||||| |||||||| || |||  | |||||  || ||| |||  ||||||||||||||||||||||| ||||||||    
T  20411669 aagttgtaagatgttgttccaaagtattgaagtcatataagttgttgatgttgtccaaattgtaagttgttgagtccatgcatactcatttgaagttgag 20411768  T
Q  249 ggcttgatgc 258  Q
    ||||||||||    
T  20411769 ggcttgatgc 20411778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 23017094 - 23017134
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23017094 ttgagtccatgcatactcatttaagttgagggcttgatgcc 23017134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 31735794 - 31735913
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||   |||||||| | ||||| |||||  |||||||||||||| || |||||||||| |  |||||||       ||||||||||||    
T  31735794 tgttggtctaagttgca-aagttgtaagttgttgttccaagatattggagtcatataagttgtctaagttat--aagttgc-------tgagtccatgca 31735883  T
Q  232 tactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||| ||||||||||    
T  31735884 tactcatttaagttgagggtttgatgccct 31735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 17229823 - 17229866
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  17229823 gttgagtccatccatactcatttaagttgagggcttgatgccct 17229866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 17743153 - 17743110
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  17743153 gttgagtccatgcatacccatttaagttgagggcttgatgccct 17743110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 23083170 - 23083280
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||| | |||||| |||||||||||||| || |||  | |||||  |||||| |||  |||||||||||||||||||| || ||||||||    
T  23083170 aagttgtaagatgtcgttccaaagtattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatactca-ttgagttgagg 23083268  T
Q  250 gcttgatgccct 261  Q
    |||| |||||||    
T  23083269 gcttaatgccct 23083280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 18260102 - 18260214
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg--caagacgttgagtccatgcatactcatttaagttga 247  Q
    |||||||| | ||||| |||||| |||||||||||||| || |||  | |||||  ||||||  || |  |||||||||||||||||||||| |||||||    
T  18260102 aagttgtaagttgttgttccaaagtattggagtcatataagttgttgatgttgtccaagttgtacacgttgttgagtccatgcatactcatt-aagttga 18260200  T
Q  248 gggcttgatgccct 261  Q
    ||||||||||||||    
T  18260201 gggcttgatgccct 18260214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 7825733 - 7825694
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  7825733 gttgagtccatgcatactcatttacgttgagggcttgatg 7825694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 261
Target Start/End: Complemental strand, 16493164 - 16493058
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| |||| || |||||||||||||||| | || ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||    
T  16493164 tgtaagatgatgttccaaattattggagttacataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggctt 16493066  T
Q  254 gatgccct 261  Q
    ||||||||    
T  16493065 gatgccct 16493058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 22376785 - 22376895
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||  ||||||| |||||| | |||||||||||| |  |||  | |||||  |||||| |||  |||||||||||||||||||| || ||||||||    
T  22376785 aagttgtgagatgttgttccaaagttttggagtcatataacttgttgatgttgtccaagttgtaagttgttgagtccatgcatactca-ttgagttgagg 22376883  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  22376884 gcttgatgccct 22376895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 22421068 - 22420997
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||  ||||||| ||||||    
T  22421068 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatagtgacttgttgcata 22420997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 27126446 - 27126485
Alignment:
Q  222 agtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  27126446 agtccatgcatactcatttgagttgagggcttgatgccct 27126485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 33443000 - 33442957
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  33443000 gttgagtccatgcatactcatttatgttgggggcttgatgccct 33442957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 19444250 - 19444292
Alignment:
Q  220 tgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  19444250 tgagtccattgcatactcatttaagttgagggcttgatgccct 19444292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 20223955 - 20223854
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||| | |||| ||| ||| | ||| |||||| || |||  |||||||||||||||||||||| | |||  |||||||||||    
T  20223955 gatgttgttccaaattattggatttatataagaggtcgatgtt-tttaagatgtaagttgttgagtccatgcatactcattcatgtttggggcttgatgc 20223857  T
Q  259 cct 261  Q
    |||    
T  20223856 cct 20223854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 22117939 - 22117838
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||| | |||| ||| ||| | ||| |||||| || |||  |||||||||||||||||||||| | |||  |||||||||||    
T  22117939 gatgttgttccaaattattggatttatataagaggtcgatgtt-tttaagatgtaagttgttgagtccatgcatactcattcatgtttggggcttgatgc 22117841  T
Q  259 cct 261  Q
    |||    
T  22117840 cct 22117838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 261
Target Start/End: Original strand, 16133649 - 16133682
Alignment:
Q  228 tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||    
T  16133649 tgcatactcatttaagttgagggcttgatgccct 16133682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 23492259 - 23492300
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  23492259 tgagttcatgcatactcattaaagttgagggcttgatgccct 23492300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 23497857 - 23497898
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  23497857 tgagttcatgcatactcattaaagttgagggcttgatgccct 23497898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 15705735 - 15705774
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  15705735 gttgagtccatgcataatcatttaagttgggggcttgatg 15705774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 257
Target Start/End: Original strand, 20078338 - 20078377
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||| |||||||||||||||||||||| ||||||||    
T  20078338 gttgagtctatgcatactcatttaagttgagagcttgatg 20078377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 22556282 - 22556243
Alignment:
Q  222 agtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  22556282 agtccatgcatactcattaaagttgagggtttgatgccct 22556243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 23076684 - 23076641
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  23076684 gttgagtccatgcatactcattcatgttgggggcttgatgccct 23076641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 18458110 - 18458148
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  18458110 tgagtccatgcatactcattatagttgagggcttgatgc 18458148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 19362378 - 19362336
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| |||||| |||||||    
T  19362378 ttgagtccatgcatactcattaaagttgggggctttatgccct 19362336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 21680805 - 21680846
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||| || ||||||||||||||||||    
T  21680805 tgagtccttgcatactcattaaatttgagggcttgatgccct 21680846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 25920745 - 25920704
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| ||||| |||||| ||||||||||||||    
T  25920745 tgagtccatgcataatcattaaagttgggggcttgatgccct 25920704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 28947543 - 28947502
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||| ||| ||||||||||    
T  28947543 tgagtccatgcatactcattaaagttgggggtttgatgccct 28947502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 18453132 - 18453092
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||| | |||| ||||||||||||||    
T  18453132 gagtccatgcatactcattcatgttgggggcttgatgccct 18453092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 12371544 - 12371284
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12371544 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgg 12371445  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12371444 tgttgccttgctgtcgtgattaggatgctaatgttagtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 12371345  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  12371344 tgtttaagttgtaagacattgagtccatgcatactcattcaagttgagggcttgatgccct 12371284  T

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Target: chr7; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 11066734 - 11066474
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  11066734 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatagttatattggatgatcattgttgttgttgacttgctgcatattatttaatgg 11066635  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11066634 tgctgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 11066535  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  11066534 tgtttaagttgtaagacgttgagtccatgcatactcttttaagttgagggtttgatgccct 11066474  T

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Target: chr7; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 12127950 - 12128210
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||| || |||||||    
T  12127950 ttattaatgatactatgttgtgaaagatgtttatatgaagttgtaatggatatattggacgattattgttgatgttgacttactgcatattagttaatgg 12128049  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12128050 tgctgccttgctgtcgtgattaggatgctaatgttggtcgaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 12128149  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12128150 tgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggtttgatgccct 12128210  T

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Target: chr7; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 8851968 - 8852211
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  8851968 ttgtgaaagattttgatataaagttgtaatggttatatgggatgattattgttgatgttgacttactgcatattatttaatggtgttgccttgctgtcgt 8852067  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagac 217  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8852068 gattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagac 8852167  T
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  8852168 attgagtccatgcatactcatttaagttgagggcttgatgccct 8852211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 32434376 - 32434631
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||  ||||||||||    
T  32434376 ttattaatgatgttatgctatgaaagatgttgatatgaagttgtaatggttatattggatgattattgctgatgttgactt-ctggattttatttaatgg 32434474  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  32434475 tgctgccttgctgtcgtgattagaatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattatttgagtcatatgagatgtctaagt 32434574  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||    
T  32434575 tgtttaagttgtaagacgttgagtccatgcatactcatttaagtttaggtcttgatg 32434631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 58 - 261
Target Start/End: Original strand, 59234 - 59438
Alignment:
Q  58 gatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtgattaggat-gctaatgttggtctaagttgtttaagttgt 156  Q
    |||| |||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  59234 gatgtttattgttgatgttgacttgctccatattatttaatgttgttgccttgctgtcgtaattaggattgctaatgttggtctaagttgtttaagttgt 59333  T
Q  157 atgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgat 256  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  59334 aagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgcatgctcatttaagttgagggcttgat 59433  T
Q  257 gccct 261  Q
    |||||    
T  59434 gccct 59438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 11391929 - 11392113
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||  ||||||||||    
T  11391929 ttgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatagtgctgttttgctgtcgt 11392028  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  11392029 gattaggatgctaatgttggtctaagttgtttaaattgtaagattttgatccaaattattggagtcatatgaga-gtctaagttgt 11392113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 13148258 - 13148389
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  13148258 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattagatgattattgttgatgttgacttgctgcatattatttaatgg 13148357  T
Q  101 tgttgccttgctgtcgtgattaggatgctaat 132  Q
    || |||||||||||||||||||||||||||||    
T  13148358 tgctgccttgctgtcgtgattaggatgctaat 13148389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 46386997 - 46387108
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46386997 aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagg 46387096  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  46387097 gcttgatgccct 46387108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 17232609 - 17232410
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||  ||    
T  17232609 ttgtgaaagatgttgatatgaagttggaatggttgtattagatgattattgttgctgttgacttgctgtatattatttgatggtgttgccttgctgatgt 17232510  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |             |||| ||||||||||||||| | |||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||    
T  17232509 gatgtattaatatcattaagatgctaatgttggtttgagttgtttaagttgtaaggtgttgatccaaattattggagtcataagagatgtctaagttgtt 17232410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 37727679 - 37727877
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg 118  Q
    |||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| |||||||||||||||||  |||    
T  37727679 tgtgaaagttgtagatatgaagttgtaatggttgtatttgatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgctgatgtg 37727778  T
Q  119 at-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    ||             || ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||    
T  37727779 atgtattaatatcattaagatgctaatgttggtttaagttgtttaagttataagatgttggtccaaattattggagtcatatgagatgtctaagttgtt 37727877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 36686001 - 36686246
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| | |||||||||||| |||| |||||||  |||||||||| |||||| ||||||||||||||   || |||| ||||| |||||||| ||    
T  36686001 ttgtgaaagacgctgatatgaagttttaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgt 36686100  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |    
T  36686101 gatgaattaataccattaagatg-tctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgta 36686197  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  36686198 agatgttgagtccattgcatactcatttaagttgagggcttgatgccct 36686246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 18075463 - 18075574
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||||| ||||||||| ||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18075463 aagttgtaagatgttgattcaaattatttgagtcatataagatatctaagttgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagg 18075562  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  18075563 gcttgatgccct 18075574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 128 - 261
Target Start/End: Original strand, 13150458 - 13150582
Alignment:
Q  128 ctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca 227  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||||||         |||||||||||||||    
T  13150458 ctaatgttggtctaagttgtttaagttgtaagatgttgatctaaattatttgagtcatatgagatttctaagttgt---------aagacgttgagtcca 13150548  T
Q  228 tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||    
T  13150549 tgcatactcatttaagttgagggcttgatgccct 13150582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 14183560 - 14183672
Alignment:
Q  146 gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagtt 245  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||   |||||||||||| |||||||||||||||||||||||||||||| ||    
T  14183560 gtttaagttgtaagatgttgatccaaattattggagttatatgagatgtct---ttgtttaagttgtaagacgttgagtccatgcatactcatttaactt 14183656  T
Q  246 gagggcttgatgccct 261  Q
    ||||||||||||||||    
T  14183657 gagggcttgatgccct 14183672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 9389830 - 9390028
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||||||||| ||||||||| |||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||| || ||    
T  9389830 ttgtgaaagatgcttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctacatattatttaatggtgttgccttgcggttgt 9389929  T
Q  118 g----attaggat--------gctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |    ||||  ||         ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  9389930 gacgtattaatatcatgaagatctaatgtgggtctaagttgtttaagttgtaaaatgttgatccaaattattggagtcataagagatgtctaagttgtt 9390028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 30821007 - 30821248
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||| | ||||||||||||||||||| |||||||  |||||||||| |||||| | ||||||||||||   || |||| ||||| |||| ||| ||    
T  30821007 ttgtgaaatacgttgatatgaagttgtaattgttatatatgatgattattattgatggtaacttgctgcatatgtttaaatgatgttgtcttgttgttgt 30821106  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |    
T  30821107 gatgaattaataccattaagatg-tctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgta 30821203  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatg 257  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||    
T  30821204 agatgttgagtccattgcatactcatttaagttgagggcttgatg 30821248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 38480338 - 38480095
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaa-tggtgttgccttgctgtcg 116  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| |||||| |||||||||||||| ||||||| || ||||| |||||||| |    
T  38480338 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcata-tatttaaatgatgttgtcttgctgttg 38480240  T
Q  117 tgat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgc 212  Q
    ||||    ||  |   | | | |  ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |     
T  38480239 tgatgaattaataccattaagata-tctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgt 38480143  T
Q  213 aagacgttgagtcca-tgcatactcatttaagttgagggcttgatgcc 259  Q
    |||| || ||||| | ||||||||||||||||||||||| ||||||||    
T  38480142 aagatgtagagtctattgcatactcatttaagttgagggtttgatgcc 38480095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 8468415 - 8468225
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | |||||||||||||||||||||||  ||    
T  8468415 ttgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttaatggtgttgccttgctgatgt 8468316  T
Q  118 g----attaggatgctaatgttggtctaa-gtt-gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |    ||||  ||  | | | ||  |||| ||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||    
T  8468315 gatgtattaatatcattaagatg--ctaatgttggtttaagttgtaagatgttgatccaaattattgaagtcataagagatgtctaagttgtt 8468225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 14270177 - 14270367
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| |||||||||||||||||  ||    
T  14270177 ttgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgctgatgt 14270276  T
Q  118 g----attaggatgctaatgttggtctaa-gtt-gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |    ||||  ||  | | | ||  |||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  14270277 gatgtattaatatcattaagatg--ctaatgttggtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 14270367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 45847773 - 45847963
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| |||||||||||||||||  ||    
T  45847773 ttgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgctgatgt 45847872  T
Q  118 g----attaggatgctaatgttggtctaa-gtt-gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |    ||||  ||  | | | ||  |||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  45847873 gatgtattaatatcattaagatg--ctaatgttggtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 45847963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 48812018 - 48811907
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatactcatttaagttgag 248  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| | |||| |||||||||| |||||||||||||||||||||    
T  48812018 aagttgtaagatgttgatccaaattattggagtcatatgagatatctaagttg-ttaagtcgtaagatgttgagtccattgcatactcatttaagttgag 48811920  T
Q  249 ggcttgatgccct 261  Q
     | ||||||||||    
T  48811919 agtttgatgccct 48811907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 6170357 - 6170477
Alignment:
Q  126 tgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagacgttgagt 224  Q
    ||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||  |||| |||||||    
T  6170357 tgctaatgttggt-taagttgtttaagttatatgatgttggtccaaattattggagtcataagagatgtctaagttg-ttaagttgttaagatgttgagt 6170454  T
Q  225 cca-tgcatactcatttaagttg 246  Q
    ||| |||||||||||||| ||||    
T  6170455 ccattgcatactcatttacgttg 6170477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 15213800 - 15213707
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgc 111  Q
    ||||||||||  |||||||||| ||||||| |||||||  |||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  15213800 ttgtgaaagacattgatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttgccttgc 15213707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 18875856 - 18875916
Alignment:
Q  199 gttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18875856 gttgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 18875916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 20619392 - 20619291
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| ||||||||||| || | |||| ||| ||| | ||| | ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20619392 gatgttgttccaaattattagatttatataagaggtcgatgtt-tctaagttgtaagacgttgagtccatgcatactcattcaagttgagggcttgatgc 20619294  T
Q  259 cct 261  Q
    |||    
T  20619293 cct 20619291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 11085100 - 11085013
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttg 105  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||| ||||||||||||||  ||| ||||||||||    
T  11085100 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatacgattaaatggtgttg 11085013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 15281426 - 15281315
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||  |||||||||||||| || |||  ||||||| ||||| | |||  | ||||||||||||||||||||||||||||||    
T  15281426 aagttgtaagttgttgttccaagatattggagtcatataagttgttgaagttgtctaagtcgtaagttgctgagtccatgcatactcatttaagttgagg 15281327  T
Q  250 gcttgatgccct 261  Q
    |||| |||||||    
T  15281326 gcttaatgccct 15281315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 11053812 - 11053684
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||   |||||||| | ||||| |||||  |||| ||||||||| || | |  ||||||| ||||||| |||  | |||||||||| |    
T  11053812 tgttggtctaagttgca-aagttgtaagttgttgttccaagatatttgagtcatataagtttttgaagttgtctaagttgtaagttgctgagtccatgaa 11053714  T
Q  232 tactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||    
T  11053713 tactcatttaagttgagggcttgatgccct 11053684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 43277707 - 43277816
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| | ||||| |||||| |||||||||||||| || |||  | |||||  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  43277707 aagttgtaagttgttgttccaaaatattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatactcatttgaagttgag 43277806  T
Q  249 ggcttgatgc 258  Q
    ||||||||||    
T  43277807 ggcttgatgc 43277816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 17130615 - 17130740
Alignment:
Q  133 gttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcat 232  Q
    |||||||||||||||  |||||||| | || || |||||  |||| ||||||||| || |||  ||||||| ||||||| |||  |||||||||||||||    
T  17130615 gttggtctaagttgt--aagttgtaagttgatgttccaagatattagagtcatataagttgttgaagttgtctaagttggaagttgttgagtccatgcat 17130712  T
Q  233 actcattt-aagttgagggcttgatgcc 259  Q
    |||||||| |||||||||| ||||||||    
T  17130713 actcatttgaagttgagggtttgatgcc 17130740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 19558239 - 19558307
Alignment:
Q  193 gtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||   |  |||||||||||||||||||||| |||||||||||||||||||||    
T  19558239 gtctaagttgtttaagttgttggttgttgagtccatgcatactcattaaagttgagggcttgatgccct 19558307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 130985 - 131028
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  130985 gttgagtccatgcatactcatttaagttgagggcttgatgccct 131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 11092838 - 11092767
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||||||||||||||| ||||||| |||||||  |||||||||| |||||| ||||||| ||||||    
T  11092838 ttgtgaaagatgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgttgcata 11092767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 38519325 - 38519282
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38519325 gttgagtccatgcatactcatttaagttgagggcttgatgccct 38519282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 18302143 - 18302061
Alignment:
Q  31 tgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    |||||||||||||||||| || |||| |||||||||||||||||||| |||| || | | ||||| ||| |||||||||||||    
T  18302143 tgatatgaagttgtaatgattgtatttgatgattattgttgatgttggcttgttgtaaattatttgatgttgttgccttgctg 18302061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 37785247 - 37785356
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatt-taagttgag 248  Q
    |||||||| | ||||| |||||  ||||||||||| ||||| |||  ||||||| ||||||| |||  ||||||||||||||||||||||  ||||||||    
T  37785247 aagttgtaagttgttgttccaagatattggagtcacatgagttgttgaagttgtctaagttgtaagttgttgagtccatgcatactcattcaaagttgag 37785346  T
Q  249 ggcttgatgc 258  Q
    || |||||||    
T  37785347 ggtttgatgc 37785356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 48809461 - 48809530
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||   |  | |||||||| |||||||||||||||||||||||||||||||||    
T  48809461 tgtctaagttgtttaagttgttggttgctgagtccacgcatactcatttaagttgagggcttgatgccct 48809530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 9320480 - 9320551
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||| ||||||| ||||||    
T  9320480 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgttgcata 9320551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 11769019 - 11769125
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| ||||||| | |||||||||||||| |||| ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||    
T  11769019 tgtaagatgttgtttcaaattattggagttatataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggctt 11769117  T
Q  254 gatgccct 261  Q
    ||||||||    
T  11769118 gatgccct 11769125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 19282179 - 19282136
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  19282179 gttgagtccatgcatactcatttacgttgagggcttgatgccct 19282136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 44374033 - 44373990
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  44374033 gttgagtccatgcatactcatttacgttgagggcttgatgccct 44373990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 44382898 - 44382855
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  44382898 gttgagtccatgcatactcatttacgttgagggcttgatgccct 44382855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 48213815 - 48213926
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| || || || ||| |||| ||| || ||||||||||||| ||||||   |  | |||||||||||||||||||| |||||||||    
T  48213815 aagttgtaagttgttgttctaagttgttgaagtcgtataagttgtctaagttgttaaagttgttggttgctgagtccatgcatactcattaaagttgagg 48213914  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  48213915 gcttgatgccct 48213926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 17071160 - 17071288
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  | |||  |||||||||||||| || |||  | ||||||||||||| | |  ||||||| ||||||    
T  17071160 tgttggtctaagttgta-aagttgtaagttgttatttcaagatattggagtcatataagttgtgga-gttgtttaagttgtacgttgttgagtacatgca 17071257  T
Q  232 tactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||    
T  17071258 tactcatttgaagttgagggcttgatgccct 17071288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 33001141 - 33001012
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||| | |||  |||||||||||||| || |||  ||||||| ||| ||| |||  | ||||||||||||    
T  33001141 tgttggtctaagttgta-aagttgtaagttgttgtttcaagatattggagtcatataagttgttgaagttgtctaaattgtaagttgctgagtccatgca 33001043  T
Q  232 tactcat-ttaagttgagggcttgatgccct 261  Q
    ||||||| | ||||||||||||| |||||||    
T  33001042 tactcatataaagttgagggcttaatgccct 33001012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 47094200 - 47094138
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||   |  |||||||||||||||||||||| |||||||||||||||||||    
T  47094200 aagttgtttaagttgttggttgttgagtccatgcatactcattaaagttgagggcttgatgcc 47094138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 11772396 - 11772480
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatt 239  Q
    |||| ||||||| |||||||||||||||| |||| ||||||| | ||| | |||| || |||| ||||||||||||||||||||||    
T  11772396 tgtaagatgttgttccaaattattggagttatataagatgtcgatgtt-tctaagatgtaagatgttgagtccatgcatactcatt 11772480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 13133496 - 13133537
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  13133496 tgagtccatgcatactcatttaagctgagggcttgatgccct 13133537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 15576925 - 15576966
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  15576925 tgagtccatgcatactcattaaagttgagggcttgatgccct 15576966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 42461902 - 42461861
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  42461902 gttgagtccatgtatactcatttaagttgagggcttgatgcc 42461861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 10660211 - 10660255
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  10660211 gttgagtccatgcatactcatttgaagttgagggcttgatgccct 10660255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 13699710 - 13699754
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  13699710 gttgagtccatgcatactcatttgaagttgagggcttgatgccct 13699754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 36705626 - 36705670
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  36705626 gttgagtccatgcatactcatttgaagttgagggcttgatgccct 36705670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 4070890 - 4070779
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||  ||||||| || ||| || |||  ||||||| ||||||| |||  | ||||||||||||||||||| || |||||||    
T  4070890 aagttgtaagttgttgttccaagatattggaatcgtataagttgttgaagttgtctaagttgtaagttgctgagtccatgcatactcatatatgttgagg 4070791  T
Q  250 gcttgatgccct 261  Q
    | ||||||||||    
T  4070790 gtttgatgccct 4070779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 12466225 - 12466268
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||| ||||||||||    
T  12466225 gttgagtccatgcatactcatttacgttgagggtttgatgccct 12466268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 16996171 - 16996132
Alignment:
Q  222 agtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  16996171 agtccatgcatactcatttaagttgggggcttgatgccct 16996132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 20585443 - 20585400
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  20585443 gttgagtccatgcatactcatttacgttgatggcttgatgccct 20585400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 14219982 - 14220044
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||||| ||||||| |||  | ||||||||||||||||||||| ||||||||||||||||||    
T  14219982 aagttgtctaagttgtaagttgctgagtccatgcatactcatttaaagttgagggcttgatgc 14220044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 15096641 - 15096683
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  15096641 ttgagtccatgcatactcattaaagttgagggtttgatgccct 15096683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 16077485 - 16077419
Alignment:
Q  195 ctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||   |  |||||||||||||||||||||| ||||| |||| ||||||||||    
T  16077485 ctaagttgtttaagttgttggttgttgagtccatgcatactcattaaagttaagggtttgatgccct 16077419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 8136045 - 8136086
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  8136045 tgagtctatgcatactcattaaagttgagggcttgatgccct 8136086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 258
Target Start/End: Original strand, 9033517 - 9033556
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||||||||||||||||| |||||| |||||||||||    
T  9033517 ttgagtccatgcatactcattaaagttgggggcttgatgc 9033556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 9177834 - 9177877
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  9177834 gttgagtccatgcatactcattcatgttgggggcttgatgccct 9177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 14161835 - 14161878
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||| |||||||  ||||||||||||||||||    
T  14161835 gttgagtccatgcataatcatttacattgagggcttgatgccct 14161878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 15439385 - 15439330
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatg 74  Q
    |||||||| |||||||||||||||||||| |||||||  || ||||||| ||||||    
T  15439385 tgtgaaagttgttgatatgaagttgtaattgttatatatgaagattattattgatg 15439330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 16091712 - 16091669
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  16091712 gttgagtccatgcatactcattcatgttgggggcttgatgccct 16091669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 17017623 - 17017666
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  17017623 gttgagtccatgcatactcattcatgttgggggcttgatgccct 17017666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 32301063 - 32301020
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||| ||||||| | |||||||||||||||||||||||||    
T  32301063 gttgagtctatgcatatttatttaagttgagggcttgatgccct 32301020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 9744092 - 9744134
Alignment:
Q  220 tgagtccatgcatactcatttaa-gttgagggcttgatgccct 261  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  9744092 tgagtccatgcatactcatctaaagttgagggcttgatgccct 9744134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 14153885 - 14153923
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  14153885 tgagtccatgcataatcattaaagttgagggcttgatgc 14153923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 18203824 - 18203723
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||| | |||| ||| ||| | ||| | |||| || |||  |||||||||| ||||||||||| | |||| |||||||||||    
T  18203824 gatgttgttccaaattattggatttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccacgcatactcattcatgttgggggcttgatgc 18203726  T
Q  259 cct 261  Q
    |||    
T  18203725 cct 18203723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 14044768 - 14044656
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattta-agttga 247  Q
    ||||||| | ||||||| |||||||||||||| | |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| |  ||||     
T  14044768 taagttgaaagatgttgttccaaattattggatttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcattgttgg 14044670  T
Q  248 gggcttgatgccct 261  Q
    ||||||||||||||    
T  14044669 gggcttgatgccct 14044656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 14354798 - 14354686
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattta-agttga 247  Q
    ||||||| | ||||||| |||||||||||||| | |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| |  ||||     
T  14354798 taagttgaaagatgttgttccaaattattggatttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcattgttgg 14354700  T
Q  248 gggcttgatgccct 261  Q
    ||||||||||||||    
T  14354699 gggcttgatgccct 14354686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 15120235 - 15120272
Alignment:
Q  222 agtccatgcatactcat-ttaagttgagggcttgatgc 258  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  15120235 agtccatgcatactcatattaagttgagggcttgatgc 15120272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 24270776 - 24270817
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| ||||| |||||| ||||||||||||||    
T  24270776 tgagtccatgcataatcattaaagttgggggcttgatgccct 24270817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 25941436 - 25941395
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| ||||| |||||| ||||||||||||||    
T  25941436 tgagtccatgcataatcattaaagttgggggcttgatgccct 25941395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 229; Significance: 1e-126; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 19609590 - 19609330
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||    
T  19609590 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgttacatattatttaatgg 19609491  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19609490 tgctgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 19609391  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19609390 tgtttaagctgtaagacgttgagtccatgcatactcatttaagttgaggacttgatgccct 19609330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 35812240 - 35812483
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |||||||| ||    
T  35812240 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatctaatgatgttgtcttgctgttgt 35812339  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagac 217  Q
    |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35812340 gattaggatgctaatgttggtctaagttgtttaagttgaaagatattgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagac 35812439  T
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  35812440 gttgactccatgcatactcatttaagttgagggcttgatgccct 35812483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 9923398 - 9923269
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  9923398 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttgctgtcgt 9923299  T
Q  118 gattaggatgctaatgttggtctaagttgt 147  Q
    ||||||||||||||||||||||||||||||    
T  9923298 gattaggatgctaatgttggtctaagttgt 9923269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 10357362 - 10357486
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactc 236  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  10357362 gtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagatgttgagtccatgcatactc 10357461  T
Q  237 atttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||    
T  10357462 atttaagttgagggcttgatgccct 10357486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 11479461 - 11479590
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | |||||||||| |||    
T  11479461 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattacttaatggcgctgccttgctgacgt 11479560  T
Q  118 gattaggatgctaatgttggtctaagttgt 147  Q
    ||||||||||||||||||||||||||||||    
T  11479561 gattaggatgctaatgttggtctaagttgt 11479590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 146 - 259
Target Start/End: Original strand, 15042058 - 15042172
Alignment:
Q  146 gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttg-tttaagttgcaagacgttgagtccatgcatactcatttaagt 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15042058 gtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgttttaagttgtaagacgttgagtccatgcatactcatttaagt 15042157  T
Q  245 tgagggcttgatgcc 259  Q
    |||||||||||||||    
T  15042158 tgagggcttgatgcc 15042172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 15112366 - 15112252
Alignment:
Q  146 gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttg-tttaagttgcaagacgttgagtccatgcatactcatttaagt 244  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15112366 gtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgttttaagttgtaagacgttgagtccatgcatactcatttaagt 15112267  T
Q  245 tgagggcttgatgcc 259  Q
    |||||||||||||||    
T  15112266 tgagggcttgatgcc 15112252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 15099336 - 15099095
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||    
T  15099336 ttgtgaaagatgcttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatactatttaatggtgttgccttgcggttgt 15099237  T
Q  118 g----attaggat--------gctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgttt 205  Q
    |    ||||  ||         |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||| ||    
T  15099236 gacgtattaatatcatgaagatctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattagagtcataagagctgtctaagttg-tt 15099138  T
Q  206 aagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    ||||||  || | |||||||||| |||||||||||||| ||||    
T  15099137 aagttgttaaaatgttgagtccattgcatactcatttacgttg 15099095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 10357300 - 10357391
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttga 222  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  10357300 atgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagatgttga 10357391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 362234 - 362001
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| |||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| | | ||||| |||||||||||||||||  ||    
T  362234 ttgtgaaagacgttgatatgaagttataatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgctgatgt 362135  T
Q  118 g----attaggatgctaatgttggtctaa-gtt-gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg 211  Q
    |    ||||  ||  | | | ||  |||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||| || ||||||||    
T  362134 gatgtattaatatcattaagatg--ctaatgttggtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagctg-ttaagttg 362038  T
Q  212 -caagacgttgagtcca-tgcatactcatttaagttg 246  Q
      ||||  ||||||||| |||||||||||||| ||||    
T  362037 ttaagatattgagtccattgcatactcatttacgttg 362001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 46642821 - 46642722
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg 118  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||| |||||||||||| ||||||    
T  46642821 tgtgaaagacgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacgtgctgcatattagttaatagtgttgccttgccgtcgtg 46642722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 33186081 - 33185962
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatact 235  Q
    |||||||||||| |||||||| ||||||||||||||| |||||  ||||||||||||||||||||| |||||| | |||| |||||||||| ||||||||    
T  33186081 gtctaagttgtt-aagttgtaagatgttgatccaaatcattggtatcatatgagatgtctaagttg-ttaagtcgtaagatgttgagtccattgcatact 33185984  T
Q  236 catttaagttgagggcttgatg 257  Q
    ||||||||||||||||||||||    
T  33185983 catttaagttgagggcttgatg 33185962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 15868832 - 15869030
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||| |||| |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||  ||    
T  15868832 ttgtgaatgatgatgatatgaagttgtaatgattatatctgatgattattgttgatgttgacttgctgcaaattatttgatgttgttgccttgctgatgt 15868931  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |             |||| ||||||||||||||| ||||| | || |||| || |||||||  |||| |||||||||||||||||||||| ||||||||    
T  15868932 gatgtattaatatcattaagatgctaatgttggtttaagtcgcttgagttataagatgttggcccaatttattggagtcatatgagatgtttaagttgt 15869030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 50160192 - 50160063
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||| ||| |||||||| |||||||| || |||| |||||| ||||||| |||||| || |||| | ||||||||||||| |||| |||||||||||||    
T  50160192 atgttagtcaaagttgtt-aagttgtaagaagttgttccaaagtattggattcatataagctgtcgatgttgtttaagttgtaagatgttgagtccatgc 50160094  T
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||    
T  50160093 atactcattcaagttgagggcttgatgccct 50160063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 16043036 - 16042924
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| |||||||||||||| |||||||||||||| ||||||  | ||||| |||| |  |||| |||||||||||||||||||||||||||||||    
T  16043036 taagatgtaagatgttgatccaaactattggagtcatataagatgttcatgttgtctaaggtataagatgttgagtccatgcatactcatttaagttgag 16042937  T
Q  249 ggcttgatgccct 261  Q
    || ||||||||||    
T  16042936 ggtttgatgccct 16042924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 52873290 - 52873357
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctg 85  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  52873290 ttgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctg 52873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 630897 - 631095
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||| |||| |||||||||||||||||| || |||| |||||||||| ||||||||||||||||||| | ||||| ||  |||||||||||||  ||    
T  630897 ttgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattattgatgttgacttgctgcaaattatttgattttgttgccttgctgatgt 630996  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |             |||| ||||||||||||||| ||||| |||| |||| || ||| | || |||| |||||||||||||||||||||| ||||||||    
T  630997 gatgtattaatatcattaagatgctaatgttggtttaagtcgtttgagttataagatatcgacccaatttattggagtcatatgagatgtttaagttgt 631095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 13844527 - 13844435
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttg 110  Q
    |||||||||||| ||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||  | | ||||| ||||||||||||||    
T  13844527 ttgtgaaagatgctgatatgaagttgtaatggttgtatttgattattattgttgatgatgacttgctataaattatttgatggtgttgccttg 13844435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 15869019 - 15869078
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  15869019 tgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 15869078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 19738261 - 19738151
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||| |||||| |||||||||||||| || |||| | |||||  |||||| |||  |||||||||||||||||||| || ||||||||    
T  19738261 aagttgtaagatgttgttccaaagtattggagtcatataagttgtcgatgttgtccaagttgtaagttgttgagtccatgcatactca-ttgagttgagg 19738163  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  19738162 gcttgatgccct 19738151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 19857429 - 19857371
Alignment:
Q  146 gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  19857429 gtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 19857371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 14185169 - 14185094
Alignment:
Q  126 tgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttg 202  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| || | |||||||||||||||| |||||||    
T  14185169 tgctaatgttggtctaagttgcttaagttgtaagatgttgatccaaacta-tcgagtcatatgagatgtttaagttg 14185094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 20740 - 20614
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  |||||  ||||||||  |||| || |||  ||||||| ||||||| |||  ||||||||||||||    
T  20740 tgttggtctaagttgta-aagttgtaagttgttattccaagatattggaggtatataagttgttgaagttgtctaagttgtaagttgttgagtccatgca 20642  T
Q  232 tactcatttaagttgagggcttgatgcc 259  Q
    ||||||| ||||||||||||||||||||    
T  20641 tactcatataagttgagggcttgatgcc 20614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 15365083 - 15364973
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||| |||||| |||||||||||||| || |||  | |||||  |||||| |||  |||||||||||||||||||| || ||||||||    
T  15365083 aagttgtaagatgttgttccaaagtattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatactca-ttgagttgagg 15364985  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  15364984 gcttgatgccct 15364973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 32851374 - 32851279
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    ||||||| |||| ||||||||||||||||||  | |||| ||||||||||||||||||||||||| |||| | ||| | ||| |||||||||||||    
T  32851374 ttgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgattattgttgatgttgacttgttgcaaattatatgatgttgttgccttgctg 32851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 19734463 - 19734354
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatt-taagttgag 248  Q
    |||||||| | ||||| |||||  ||||||||||||||||| |||  ||||||| ||||||| |||  | ||||||||||||||||||||  ||||||||    
T  19734463 aagttgtaagttgttgttccaagatattggagtcatatgagttgttgaagttgtctaagttgtaagttgctgagtccatgcatactcattggaagttgag 19734364  T
Q  249 ggcttgatgc 258  Q
    ||||||||||    
T  19734363 ggcttgatgc 19734354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 32851192 - 32851135
Alignment:
Q  147 tttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    ||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  32851192 tttaatttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 32851135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 9871456 - 9871568
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| ||||||  |||||| |||||||||||||| || |||  | | |||  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  9871456 aagttgtaagatgtttttccaaagtattggagtcatataagttgttgatggtgtccaagttgtaagttgttgagtccatgcatactcatttgaagttgag 9871555  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  9871556 ggcttgatgccct 9871568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 13036650 - 13036762
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| ||||||| |||||| |||||||||||||| |  |||  | |||||  |||||| |||  ||||||||||||||||||| ||| ||||||||    
T  13036650 aagttgtaagatgttgttccaaagtattggagtcatataatttgttgatgttgtccaagttgtaagttgttgagtccatgcatactcgtttgaagttgag 13036749  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  13036750 ggcttgatgccct 13036762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 33186200 - 33186133
Alignment:
Q  21 tgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcat 88  Q
    ||||||| ||||||||||||||||||| |||||||  |||||||||| |||||| |||||||||||||    
T  33186200 tgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgctgcat 33186133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 19435659 - 19435768
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| | ||||| |||||  |||||||||||||| || |||  | |||||  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  19435659 aagttgtaagttgttgttccaagatattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatactcatttgaagttgag 19435758  T
Q  249 ggcttgatgc 258  Q
    ||||||||||    
T  19435759 ggcttgatgc 19435768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 11425041 - 11424998
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  11425041 gttgagtccatgcatactcatttacgttgagggcttgatgccct 11424998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 14852978 - 14853084
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| ||||||| |||||||||||||||| |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||    
T  14852978 tgtaagatgttgttccaaattattggagttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggctt 14853076  T
Q  254 gatgccct 261  Q
    ||||||||    
T  14853077 gatgccct 14853084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 15880798 - 15880727
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||| ||||||||| ||||    
T  15880798 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctacata 15880727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 16027039 - 16027082
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  16027039 gttgagtccatgcatactcattaaagttgagggcttgatgccct 16027082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 16997614 - 16997571
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  16997614 gttgagtccatgcatactcatttacgttgagggcttgatgccct 16997571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 27995925 - 27995815
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||  |||||| |||||||||||||| || |||  | |||||  |||||| |||  |||||||||||||||||||| || | ||||||    
T  27995925 aagttgtaagatgttattccaaagtattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatactca-ttgatttgagg 27995827  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  27995826 gcttgatgccct 27995815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 14825480 - 14825379
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||||| |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| |||||||||||    
T  14825480 gatgttgttccaaattattggagttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggcttgatgc 14825382  T
Q  259 cct 261  Q
    |||    
T  14825381 cct 14825379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 32467164 - 32467292
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  |||||  |||||||||||||| || | |  | ||||| ||||||| | |  ||||||||||||||    
T  32467164 tgttggtctaagttgta-aagttgtaagttgttattccaagatattggagtcatataagttatgga-gttgtctaagttgtacgttgttgagtccatgca 32467261  T
Q  232 tactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||    
T  32467262 tactcatttgaagttgagggcttgatgccct 32467292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 12622484 - 12622443
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  12622484 tgagtccatgcatactcattaaagttgagggcttgatgccct 12622443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 40229562 - 40229497
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||| ||||||| | |  ||||||||||||||||||||||| |||||||||||||||||||||    
T  40229562 aagttgtctaagttgtacgttgttgagtccatgcatactcatttgaagttgagggcttgatgccct 40229497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 25090740 - 25090697
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  25090740 gttgagtccatgcatactcatttactttgagggcttgatgccct 25090697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 32307097 - 32307203
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| ||||||| | |||| ||||||||| |||| ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||    
T  32307097 tgtaagatgttgtttcaaaatattggagttatataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggctt 32307195  T
Q  254 gatgccct 261  Q
    ||||||||    
T  32307196 gatgccct 32307203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 40906865 - 40906822
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||||| |||||||||||||||||||||    
T  40906865 gttgagttcatgcatactcattcaagttgagggcttgatgccct 40906822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 42874886 - 42874843
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||| ||||||||||| |||||||||||||||||||    
T  42874886 gttgagtccatggatactcatttacgttgagggcttgatgccct 42874843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 53631547 - 53631590
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||| ||||| |||||||    
T  53631547 gttgagtccatgcatactcatttaagttgatggcttcatgccct 53631590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 55582331 - 55582288
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |||||| ||||||||||||||    
T  55582331 gttgagtccatgcatactcattaaagttgggggcttgatgccct 55582288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 9637935 - 9637873
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||||| |||||||  ||  ||||||||||||||||||||||| ||||||||||||||||||    
T  9637935 aagttgtctaagttgtcagttgttgagtccatgcatactcatttaaagttgagggcttgatgc 9637873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 13592273 - 13592315
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  13592273 ttgagtccatgcatactcattaaagttgggggcttgatgccct 13592315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 15791636 - 15791594
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  15791636 ttgagtccatgcatactcattaaagttgggggcttgatgccct 15791594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 15791725 - 15791683
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  15791725 ttgagtccatgcatactcattaaagttgggggcttgatgccct 15791683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 19566950 - 19566991
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  19566950 tgagtccttgcatactcattaaagttgagggcttgatgccct 19566991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 26444921 - 26444881
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  26444921 tgagtccatgcatactcatt-aagttgagggcttgatgccct 26444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 33244141 - 33244185
Alignment:
Q  218 gttgagtccatgcatactcatt-taagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  33244141 gttgagtccatgcatactcattcaaagttgagggcttgatgccct 33244185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 3485076 - 3485029
Alignment:
Q  213 aagacgttgagtccat-gcatactcatttaagttgagggcttgatgcc 259  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  3485076 aagatgttgagtccattgcatactcatttaagttgagggtttgatgcc 3485029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 15612156 - 15612054
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||| |||||  |||||||| | || || |||||  |||||||||||||| ||||||  ||||||| ||||||| |||  |||||| |||||||    
T  15612156 tgttggtctaggttgta-aagttgtaagttgatgctccaagatattggagtcatataagatgttgaagttgtctaagttgtaagttgttgagcccatgca 15612058  T
Q  232 tact 235  Q
    ||||    
T  15612057 tact 15612054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 2425563 - 2425605
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||  |||||||||||| |||||||||||||||||||||    
T  2425563 ttgagtcattgcatactcattaaagttgagggcttgatgccct 2425605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 21061707 - 21061582
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||   |||||||| | ||||| | |||| ||||||| |||||| || |||  ||||||| ||||||| |||  | | ||||||||||    
T  21061707 tgttggtctaagttgca-aagttgtaagttgttgtttcaaaatattggattcatataagttgttgaagttgtctaagttgtaagttgctaagtccatgca 21061609  T
Q  232 tactcattt-aagttgagggcttgatg 257  Q
    ||||| ||| ||||||| |||||||||    
T  21061608 tactcttttaaagttgaaggcttgatg 21061582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 25512624 - 25512586
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  25512624 tgagtccatgcataatcattaaagttgagggcttgatgc 25512586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 14507657 - 14507624
Alignment:
Q  228 tgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||| |||||||||||||||||||||    
T  14507657 tgcatactcattaaagttgagggcttgatgccct 14507624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 17333230 - 17333189
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||| | |||| ||||||||||||    
T  17333230 gttgagtccatgcatactcattcatgttgggggcttgatgcc 17333189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 46225559 - 46225599
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  46225559 tgagtccatgcatactca-ttaagttgagggtttgatgccct 46225599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 46740181 - 46740140
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||| || |||||| ||||||||||||||    
T  46740181 tgagtccatgcatactctttaaagttgggggcttgatgccct 46740140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 17958420 - 17958380
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||||    
T  17958420 gttgagtccatgcataatcattaaagttgagagcttgatgc 17958380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 250
Target Start/End: Complemental strand, 37018685 - 37018653
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgaggg 250  Q
    |||||||||||||||||||||||| ||||||||    
T  37018685 gttgagtccatgcatactcatttacgttgaggg 37018653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 51992619 - 51992575
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||    
T  51992619 gttgagtccctgcatactcatttgaagttgagggattgatgccct 51992575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 24781626 - 24781886
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  24781626 ttattaatgatgctatgttgtgaaagttgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatga 24781725  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24781726 tgctgccttgatgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 24781825  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24781826 tgtttaagttgtaagacgttgagtccatgcatactcatttatgttgagggcttgatgccct 24781886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 5032110 - 5032368
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  5032110 ttattaatgatgctatgttgtgaaaaatgttgatatgaagttataatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgt 5032209  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  5032210 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgaggtgtttaagt 5032309  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5032310 tatttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 5032368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 24883702 - 24883468
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  24883702 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttggtgtcgt 24883603  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagac 217  Q
    ||||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24883602 gattaggatgctaatgttggtctaag---------ttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagac 24883512  T
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  24883511 gttgagtccatgcatactaatttaagttgagggcttgatgccct 24883468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 6576475 - 6576219
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| | ||    
T  6576475 ttgtgaaagatgttgatatgaagttgtaatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatggtgctgccttgctattgt 6576376  T
Q  118 gat-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||             || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6576375 gatgtaataatatcattaagatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtt 6576276  T
Q  205 taagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6576275 taagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 6576219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 24436292 - 24436059
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  24436292 ttgtgaaagatgttgatatgaaattgtaatggttacattggatgatt-ttgttgatgttgacttgctgcatattatttaatggtgctgccttgctgtcgt 24436194  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagac 217  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||         ||||     
T  24436193 aattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgt---------aagat 24436103  T
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||| ||||| |||||||    
T  24436102 gttgagtccatgcatactcatttaagttgaaggcttaatgccct 24436059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 22689823 - 22689686
Alignment:
Q  124 gatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgag 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  22689823 gatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattatttgagtcatatgagatgtctaagttgtttaagttgtaagacgttgag 22689724  T
Q  224 tccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22689723 tccatgcatactcatttaagttgagggcttgatgccct 22689686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 22694419 - 22694282
Alignment:
Q  124 gatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgag 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  22694419 gatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattatttgagtcatatgagatgtctaagttgtttaagttgtaagacgttgag 22694320  T
Q  224 tccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22694319 tccatgcatactcatttaagttgagggcttgatgccct 22694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 9975055 - 9974931
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactc 236  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |    
T  9975055 gtctaagttgtttaagttgtaagatgttgatccaaattattgaagtcatataagatgtctaagttgtttaagttgtaagacgttgagtccatgcataccc 9974956  T
Q  237 atttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||    
T  9974955 atttaagttgagggcttgatgccct 9974931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 24865521 - 24865766
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||| ||||||| ||||||   || |||| ||||| |||||| | ||    
T  24865521 ttgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgctattgt 24865620  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| | |    
T  24865621 gatgaattaataccattaagatg-tctaagttgtt-aagttgtaagatgttgatccaaattattggagttatatgagatgtctaagttg-ttaagtcgta 24865717  T
Q  214 agacgttgagtcc-atgcatactcatttaagttgagggcttgatgccct 261  Q
    ||| || ||||||  ||||||||||| ||||||||||||||||||||||    
T  24865718 agatgtcgagtccgttgcatactcatgtaagttgagggcttgatgccct 24865766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 22500968 - 22500845
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatact 235  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||||||| | ||||||||    
T  22500968 gtctaagttgtt-aagttgtaagatattgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgtaagatgttgagtctattgcatact 22500871  T
Q  236 catttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||    
T  22500870 catttaagttgagggcttgatgccct 22500845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 22508902 - 22508779
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatact 235  Q
    |||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||||||| | ||||||||    
T  22508902 gtctaagttgtt-aagttgtaagatattgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgtaagatgttgagtctattgcatact 22508805  T
Q  236 catttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||    
T  22508804 catttaagttgagggcttgatgccct 22508779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 9975116 - 9975026
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttga 222  Q
    ||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  9975116 atgttggtcaaa-ttgttaaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagatgttga 9975026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 20915222 - 20915115
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatactcatttaagttgag 248  Q
    |||||||| ||||||| || ||| ||||||||||||||||||||||||||||| |||||| | |||| ||||| |||| ||||| |||||||||||||||    
T  20915222 aagttgtaagatgttgttctaaagtattggagtcatatgagatgtctaagttg-ttaagtcgtaagatgttgaatccattgcatgctcatttaagttgag 20915124  T
Q  249 ggcttgatg 257  Q
    |||||||||    
T  20915123 ggcttgatg 20915115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 21367963 - 21367861
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||         |||| ||||||||||| |||||||||| |||  ||||    
T  21367963 aagttgtaagatgttgttccaaattattggagtcatatgagttgtctaagttgt---------aagatgttgagtccatacatactcattaaagacgagg 21367873  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  21367872 gcttgatgccct 21367861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 24834967 - 24835078
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||| | |||||| ||||||| |||||| | ||||| |  ||||  |||||| |||  |||||||||||||||||||||| |||||||||    
T  24834967 aagttgtaagatgtagttccaaagtattggaatcatataaaatgtcgatattgtccaagttgtaagttgttgagtccatgcatactcattcaagttgagg 24835066  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  24835067 gcttgatgccct 24835078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 24815566 - 24815677
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||| | |||||| ||||||| |||||| || | || | |||||  |||||| |||  |||||||||||||||||||||| |||||||||    
T  24815566 aagttgtaagatgtagttccaaagtattggaatcatataagttttcgatgttgtccaagttgtaagttgttgagtccatgcatactcattcaagttgagg 24815665  T
Q  250 gcttgatgccct 261  Q
    ||||||| ||||    
T  24815666 gcttgataccct 24815677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 34136893 - 34136850
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34136893 gttgagtccatgcatactcatttaagttgagggcttgatgccct 34136850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 19202092 - 19202185
Alignment:
Q  167 tccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| | |||| ||| ||| | ||| | ||||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  19202092 tccaaattattggatttatataagaggtcgatgtt-tctaagttgtaagacattgagttcatgcatactcattcaagttgagggcttgatgccct 19202185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 18391268 - 18391309
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18391268 tgagtccatgcatactcatttaagttgagggcttgatgccct 18391309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 10897695 - 10897779
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatg 257  Q
    ||||||||||||||||| |||  | ||||| ||||||| |||  |||||||| |||||||||||||| |||||||||||||||||    
T  10897695 tattggagtcatatgagttgttgaggttgtctaagttgtaagttgttgagtctatgcatactcatttgaagttgagggcttgatg 10897779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 3538861 - 3538818
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  3538861 gttgagtccatgcatactcattaaagttgagggcttgatgccct 3538818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 26392391 - 26392293
Alignment:
Q  162 gttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||| |||||||||||||||| |||| ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||||||||||    
T  26392391 gttgttccaaattattggagttatataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggcttgatgccct 26392293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 14693362 - 14693277
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||| ||   ||||||| ||||||| |||  | ||||||||||||||||||||| |||| ||||||||||||||||    
T  14693362 tattggagtcatatgagttg---aagttgtctaagttgtaagttgctgagtccatgcatactcatttgaagtcgagggcttgatgccct 14693277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 22501089 - 22501019
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    ||||||||| ||||||||||||||||||| |||||||  |||||||| | |||||| | ||||||||||||    
T  22501089 tgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggtaacttgctgcata 22501019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 22509023 - 22508953
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    ||||||||| ||||||||||||||||||| |||||||  |||||||| | |||||| | ||||||||||||    
T  22509023 tgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatggtaacttgctgcata 22508953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 27851673 - 27851632
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  27851673 tgagtccatgcatactcatttaagctgagggcttgatgccct 27851632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 27860388 - 27860347
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  27860388 tgagtccaagcatactcatttaagttgagggcttgatgccct 27860347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 18389253 - 18389297
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  18389253 gttgagtccatgcatactcatttgaagttgagggcttgatgccct 18389297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 19358086 - 19357998
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatt-taagttgagggcttgatgccct 261  Q
    ||||||||||| ||||| |||  ||||||| ||||||| |||  | ||||||||||||||||||||  |||||||||| ||||||||||    
T  19358086 tattggagtcacatgagttgttgaagttgtctaagttgtaagttgctgagtccatgcatactcattcaaagttgagggtttgatgccct 19357998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 21316759 - 21316799
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  21316759 gttgagtccatgcatactcattaaagttgagggcttgatgc 21316799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 261
Target Start/End: Complemental strand, 21237771 - 21237665
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| ||||||| ||||||||||||||||  ||| ||||||| | ||| | |||| || |||  ||||||| |||||||||||||| | |||| ||||||    
T  21237771 tgtaagatgttgttccaaattattggagttgtataagatgtcgatgtt-tctaagatgtaagttgttgagttcatgcatactcattcatgttgggggctt 21237673  T
Q  254 gatgccct 261  Q
    ||||||||    
T  21237672 gatgccct 21237665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 36839261 - 36839218
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||| ||||||||||||    
T  36839261 gttgagtccatgcatactcatttatgttgagagcttgatgccct 36839218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 21336663 - 21336701
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  21336663 tgagtccatgcatactcattaaagttgagggcttgatgc 21336701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 25045184 - 25045056
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  |||||  |||||||||||||| || |||    ||||| ||||||| | |  ||||||||||||||    
T  25045184 tgttggtctaagttgta-aagttgtaagttgttattccaagatattggagtcatataagttgtggt-gttgtctaagttgtacgttgttgagtccatgca 25045087  T
Q  232 tactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| | |||||||||||||||||||    
T  25045086 tactcatttgatgttgagggcttgatgccct 25045056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 43947534 - 43947576
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  43947534 ttgagtccatgcatactcattaaagttgggggcttgatgccct 43947576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 5985263 - 5985143
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||| |||||  |||||||||||||| || |||||||||||  ||||||||       | ||||||||||    
T  5985263 tgttggtctaagttgta-aagttgtaagttgttgttccaagatattggagtcatataagttgtctaagttg--taagttgc-------taagtccatgca 5985174  T
Q  232 tactcat-ttaagttgagggcttgatgccct 261  Q
    ||||||| | |||||||||||||||| ||||    
T  5985173 tactcatctaaagttgagggcttgattccct 5985143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 7672421 - 7672493
Alignment:
Q  189 agatgtctaagttgtttaagttgcaagacgttgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||| |||| | |||| || |||||||| ||||||||||  |||||||||||||||||||||    
T  7672421 agatgtctaagttgtt-aagtcgtaagatgtcgagtccattgcatactcatggaagttgagggcttgatgccct 7672493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 44071586 - 44071545
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  44071586 tgagtccatgcatactcattaaagttgagggtttgatgccct 44071545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 22252659 - 22252699
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  22252659 gagtccatgcatactcatttaagttgggggcttgataccct 22252699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 25140993 - 25140953
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  25140993 gttgagtccatccatactcattaaagttgagggcttgatgc 25140953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 26896360 - 26896316
Alignment:
Q  218 gttgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||    
T  26896360 gttgagtccattgcatactcatttaagttgagggattgatgccct 26896316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 21115693 - 21115650
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  21115693 gttgagtccatgcatactcattcatgttgggggcttgatgccct 21115650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 22501183 - 22501128
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatg 74  Q
    ||||||||| ||||||||||||||||||| |||||||  |||||||| | ||||||    
T  22501183 tgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatg 22501128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 22509117 - 22509062
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatg 74  Q
    ||||||||| ||||||||||||||||||| |||||||  |||||||| | ||||||    
T  22509117 tgtgaaagacgttgatatgaagttgtaattgttatataagatgattaatattgatg 22509062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 230 - 261
Target Start/End: Original strand, 23969606 - 23969637
Alignment:
Q  230 catactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||    
T  23969606 catactcatttaagttgagggcttgatgccct 23969637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 28653467 - 28653509
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  28653467 gttgagtccatgcatactcatttacgttga-ggcttgatgccct 28653509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 261
Target Start/End: Complemental strand, 357051 - 357021
Alignment:
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||||    
T  357051 atactcatttaagttgagggcttgatgccct 357021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 6478254 - 6478296
Alignment:
Q  220 tgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  6478254 tgagtccattgcatactcatttaagttgagggtttgatgccct 6478296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 18547115 - 18547157
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||    
T  18547115 ttgagtccatgcatactcattaaagttgggggcttgataccct 18547157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 1384735 - 1384776
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| || || |||||||||||||||    
T  1384735 tgagtccatgcatactcattaaacttaagggcttgatgccct 1384776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 17306574 - 17306533
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||| | ||| |||||||||||    
T  17306574 gttgagtccatgcatactcatttacgctgaaggcttgatgcc 17306533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Complemental strand, 22685953 - 22685913
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||| | ||||| ||||||||||||||||||    
T  22685953 gttgagtccatgcagaatcattaaagttgagggcttgatgc 22685913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 25587690 - 25587730
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||| ||||| |||||| |||||||||||    
T  25587690 gttgagtccatgcataatcattaaagttgggggcttgatgc 25587730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 39936796 - 39937056
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  39936796 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttaatgttgacttgctgcatattatttaatgg 39936895  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || ||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  39936896 tgctgccttgctatcgtgattaggatgctaatgttggtctaagttgtttaagtcgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 39936995  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||    
T  39936996 tgtttaagttgtaagatgttgagtccatgcatacttatttaagttgagggcttgatgccct 39937056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 47 - 261
Target Start/End: Original strand, 6102530 - 6102753
Alignment:
Q  47 tggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtgat-------------taggatgctaatg 133  Q
    |||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||| |||||             || ||||||||||    
T  6102530 tggttatatttgatgattgttgttgatgttgacttgctccatattatttaatggtgttgccttgctgttgtgatgtattaatatcattaagatgctaatg 6102629  T
Q  134 ttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcat 232  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||  |||||| | |||| |||||||||| |||||    
T  6102630 ttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatg----agtt-cttaagtcgtaagatgttgagtccattgcat 6102724  T
Q  233 actcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||    
T  6102725 actcatttaagttgagggcttgatgccct 6102753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 27472429 - 27472628
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| |||||||||||||||||  ||    
T  27472429 ttgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgctgatgt 27472528  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |             |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  27472529 gatgtattaatatcattaagatgctaatgttggtttaagttgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 27472628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 38550124 - 38550366
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| ||||||||| |||||||  ||    
T  38550124 ttgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgtcttgctgatgt 38550223  T
Q  118 gat-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||             || ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  38550224 gatgtattaatatcattaagatgctaatgttggtttaagttgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg-t 38550322  T
Q  205 taagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||  |||| |||||||||| |||||||| ||||| ||||    
T  38550323 taagttgttaagatgttgagtccattgcatacttatttacgttg 38550366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 24713356 - 24713230
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  24713356 atgttggtc-aagttgtttaagttgtaagatgttgatccaaattattgaagtcatatgagatgtctaagctgtttaagttgtaagacgttgagtccctgc 24713258  T
Q  231 atactcatttaagttgagggcttgatgc 258  Q
    ||||||||||||||||||||||||||||    
T  24713257 atactcatttaagttgagggcttgatgc 24713230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 20982758 - 20983000
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| | | ||||| |||||||||||||||||  ||    
T  20982758 ttgtgaaagatattgatatgaagttgtaatggttgtattagatgattattgttgatgttgatttgctgtaaattatttgatggtgttgccttgctgatgt 20982857  T
Q  118 gat-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||             || |||| ||||||| || ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  20982858 gatgtattaatatcattaagatgttaatgtttgtttaaattgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg-t 20982956  T
Q  205 taagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||  |||| |||||||||| |||||||||||||| ||||    
T  20982957 taagttgttaagatgttgagtccattgcatactcatttacgttg 20983000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 21579957 - 21580203
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||||||||||||||||| |||||||  ||| |||||| |||||| ||||||||||||||   || |||| ||||| |||||||| ||    
T  21579957 ttgtgaaagacgttgatatgaagttgtaattgttatatatgataattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgt 21580056  T
Q  118 gattagg--atgctaatgttg--gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    ||| |    || | | |   |  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |    
T  21580057 gatgaattaataccatttaagatgtctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgta 21580154  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  21580155 agatgttgagtccattgcatactcatttaagttgagggcttgatgccct 21580203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 19128160 - 19128055
Alignment:
Q  61 gattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatga 160  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  19128160 gattattgttgatgttgacttgctgcatattatttaatggtgctgccttgctgtcctgattaggatgctaatgttggtctaagttgtttaagttgtaaga 19128061  T
Q  161 tgttga 166  Q
     |||||    
T  19128060 cgttga 19128055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 18760636 - 18760475
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| | ||    
T  18760636 ttgtgaaagatgttgatatgaagttataatggttatatttgatgattattgttgatgttgacttgctgcatattatttaatggtgatgccttgctattgt 18760537  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttga 166  Q
    |             |||| |||||||||||||||||||||||||||||||||| || |||||    
T  18760536 gatgtattaatatcattaagatgctaatgttggtctaagttgtttaagttgtaagacgttga 18760475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 148 - 261
Target Start/End: Original strand, 41681004 - 41681117
Alignment:
Q  148 ttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||||||||||||| |    
T  41681004 ttaagttgtaagatgttgatccaaattattggagtcatatgagatatctaagttg-ttaagtcgtaagatgttgagtccattgcatactcatttaagtcg 41681102  T
Q  247 agggcttgatgccct 261  Q
    |||||||||||||||    
T  41681103 agggcttgatgccct 41681117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 29763740 - 29763863
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatact 235  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| ||||||| |||||| | |||| |||||||||| ||||||||    
T  29763740 gtctaagttgtt-aagttgtaagatgttgatccaaattattgaagtcatatgagatgtttaagttg-ttaagtcgtaagatgttgagtccattgcatact 29763837  T
Q  236 catttaagttgagggcttgatgccct 261  Q
    ||||||||| ||||||||||||||||    
T  29763838 catttaagtcgagggcttgatgccct 29763863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 2418971 - 2419081
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtc-catgcatactcatttaagttga 247  Q
    ||||||||| |||||||||||||||||||||||||||||   ||||||| ||||||||||||| |||| |||||||| |||||||||||||| |||||||    
T  2418971 taagttgtaagatgttgatccaaattattggagtcatat---atgtctacgttgtttaagttgtaagatgttgagtctcatgcatactcattcaagttga 2419067  T
Q  248 gggcttgatgccct 261  Q
    ||||||||||||||    
T  2419068 gggcttgatgccct 2419081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 128 - 246
Target Start/End: Complemental strand, 39833850 - 39833731
Alignment:
Q  128 ctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagacgttgagtcc 226  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| || |||||  |||| |||||||||    
T  39833850 ctaatgttgatctaagttgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg-ttgagttgttaagatgttgagtcc 39833752  T
Q  227 a-tgcatactcatttaagttg 246  Q
    | |||||||||||||| ||||    
T  39833751 attgcatactcatttacgttg 39833731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 1327158 - 1327253
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| |||||||||||||||||    
T  1327158 ttgtgaacgatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgctg 1327253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19140031 - 19139966
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattat 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140031 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattat 19139966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 19128084 - 19128016
Alignment:
Q  193 gtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19128084 gtctaagttgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 19128016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 42560278 - 42560371
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgc 111  Q
    |||||||| | ||||||||||| ||||||| |||||||  |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  42560278 ttgtgaaatacgttgatatgaaattgtaattgttatatatgatgattattattgatgttgacttgctgcatattatttaatggtgttaccttgc 42560371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 18760504 - 18760440
Alignment:
Q  193 gtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  18760504 gtctaagttgtttaagttgtaagacgttgagtccatacatactcatttaagttgagggcttgatg 18760440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 19929709 - 19929820
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||| ||||||| |||||| || |||| | ||||| ||||||| |||  ||||||||||||||||||||||||||||| ||    
T  19929709 aagttgtaagttgttgttccaaaatattggaatcatataagttgtcgacgttgtctaagttgtaagttgttgagtccatgcatactcatttaagttgggg 19929808  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  19929809 gcttgatgccct 19929820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 17217740 - 17217640
Alignment:
Q  161 tgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccc 260  Q
    ||||| |||||  |||||||||||||| || |||  ||||||| ||||||| |||  | ||||||||||||||||||| |||||||||||||||||||||    
T  17217740 tgttgttccaagatattggagtcatataagttgttgaagttgtctaagttgtaagttgatgagtccatgcatactcatataagttgagggcttgatgccc 17217641  T
Q  261 t 261  Q
    |    
T  17217640 t 17217640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 20084498 - 20084625
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| |||||||  |||||||| | ||||| |||||  ||||||||||||||||| |||  ||||||| ||||||| |||  | |||||||||||    
T  20084498 atgttggtcaaagttgtc-aagttgtaagttgttgttccaagatattggagtcatatgagttgttgaagttgtctaagttgtaagttgctgagtccatgc 20084596  T
Q  231 atactcattt-aagttgagggcttgatgc 258  Q
    ||| |||||| ||||||||||||||||||    
T  20084597 atattcatttaaagttgagggcttgatgc 20084625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 20502200 - 20502312
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| ||||||| ||||||||||||||||||||| ||||||| | ||| | |||| || |||  |||||||||||||||||||||  | |||| |    
T  20502200 taagatgtaagatgttgttccaaattattggagtcatataagatgtcgatgttttctaagatgtaagttgttgagtccatgcatactcatccatgttggg 20502299  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  20502300 ggcttgatgccct 20502312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 39695401 - 39695529
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  |||||  |||||||||||||| || |||  | ||||||||||||| | |  ||||||||||||||    
T  39695401 tgttggtctaagttgtg-aagttgtaagttgttattccaagatattggagtcatataagttgtgga-gttgtttaagttgtacgttgttgagtccatgca 39695498  T
Q  232 tactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||    
T  39695499 tactcatttgaagttgagggcttgatgccct 39695529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 13428329 - 13428417
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||  |||| |||||||||| | |||||||||||| ||||    
T  13428329 gatgttgatccaaattattggagtcataagagatgtctaagttg-ttaagttgttaagatgttgagtccattacatactcatttacgttg 13428417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 19699246 - 19699118
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  |||||  ||||||||  |||| ||  ||  ||||||| ||||||| |||  ||||||||||||||    
T  19699246 tgttggtctaagttgta-aagttgtaagttgttattccaagatattggaggtatataagtcgttgaagttgtctaagttgtaagttgttgagtccatgca 19699148  T
Q  232 tactcatttaagttgagggcttgatgccct 261  Q
    ||||||| ||||||||||||||||||||||    
T  19699147 tactcatataagttgagggcttgatgccct 19699118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 45471398 - 45471467
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||   |  | ||||||||||||||||||||||||||||||||||||||||||    
T  45471398 tgtctaagttgtttaagttgttggttgctgagtccatgcatactcatttaagttgagggcttgatgccct 45471467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 5760511 - 5760468
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5760511 gttgagtccatgcatactcatttaagttgagggcttgatgccct 5760468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 32807366 - 32807295
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||| ||||||||||||||    
T  32807366 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcata 32807295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 23947381 - 23947252
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||   |||| ||| | ||||| |||||  |||||||||||||| || ||   ||||||| ||||||| |||  | ||||||||||||    
T  23947381 tgttggtctaagttgca-aagtcgtaagttgttgttccaagatattggagtcatataagttgatgaagttgtctaagttgtaagttgctgagtccatgca 23947283  T
Q  232 tactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||    
T  23947282 tactcatttaaagttgagggcttgatgccct 23947252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 22584693 - 22584734
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22584693 tgagtccatgcatactcatttaagttgagggcttgatgccct 22584734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 23669588 - 23669479
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| ||| | | |||||| |||||||||||||| || ||   |||||||  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  23669588 aagttgtaagatttcgttccaaagtattggagtcatataagttggtgaagttgtccaagttgtaagctgttgagtccatgcatactcatttgaagttgag 23669489  T
Q  249 ggcttgatgc 258  Q
    ||||||||||    
T  23669488 ggcttgatgc 23669479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 39695550 - 39695614
Alignment:
Q  198 agttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    |||||||||||||| | |  ||||||||||||||||||||||| |||||||||||||||||||||    
T  39695550 agttgtttaagttgtacgttgttgagtccatgcatactcatttgaagttgagggcttgatgccct 39695614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 1323364 - 1323407
Alignment:
Q  161 tgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  1323364 tgttgatccaaattattggagtcataagagatgtctaagttgtt 1323407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 17086256 - 17086362
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| ||||||| |||||| ||||||||| |||| ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||    
T  17086256 tgtaagatgttgttccaaaatattggagttatataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggctt 17086354  T
Q  254 gatgccct 261  Q
    ||||||||    
T  17086355 gatgccct 17086362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 20179486 - 20179529
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  20179486 gttgagtccatgcatactcatttacgttgagggcttgatgccct 20179529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 22253332 - 22253375
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  22253332 gttgagtccatgcatactcatttaagttgggggcttgatgccct 22253375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 22259233 - 22259363
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| |||||||  |||||||| | ||||| |||||  ||||||||||| ||||| |||  ||||||| ||||||| |||  | |||||||||||    
T  22259233 atgttggtcaaagttgtc-aagttgtaagttgttgttccaagatattggagtcacatgagttgttgaagttgtctaagttgtaagttgctgagtccatgc 22259331  T
Q  231 atactcatt-taagttgagggcttgatgccct 261  Q
    |||||||||  |||||||  ||||||||||||    
T  22259332 atactcattcaaagttgaaagcttgatgccct 22259363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 22381899 - 22381942
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  22381899 gttgagtccatccatactcatttaagttgagggcttgatgccct 22381942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 41680873 - 41680944
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    ||||||||||| ||||||| || ||||||| |||||||  |||||||||| |||||| ||||||||||||||    
T  41680873 ttgtgaaagatattgatatcaaattgtaattgttatatatgatgattattattgatggtgacttgctgcata 41680944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 22244584 - 22244455
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||   |||||||| | ||||| |||||  | |||||||||||| || |||  ||||||| ||||||| |||  | |||||||||||     
T  22244584 tgttggtctaagttgca-aagttgtaagttgttgttccaagatcttggagtcatataagttgttgaagttgtctaagttgtaagttgctgagtccatgct 22244486  T
Q  232 tactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||| ||||||||||    
T  22244485 tactcatttaaagttgagggtttgatgccct 22244455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 20025222 - 20025291
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||   |  | |||||||||||||||||||| |||||||||| ||||||||||    
T  20025222 tgtctaagttgtttaagttgtttgttgctgagtccatgcatactcattaaagttgagggtttgatgccct 20025291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 22318883 - 22318924
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  22318883 tgagtccatgcatactcattaaagttgagggcttgatgccct 22318924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 23888819 - 23888778
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  23888819 tgagtccatgcatactcattaaagttgagggcttgatgccct 23888778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 25849327 - 25849439
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttga 247  Q
    ||||||||| | ||||  |||||| |||||||||||||| || |||  | |||||  |||||| | |  ||||||||||||||||||||||| |||||||    
T  25849327 taagttgtaagttgttattccaaaatattggagtcatataagttgtgga-gttgtccaagttgtacgttgttgagtccatgcatactcatttgaagttga 25849425  T
Q  248 gggcttgatgccct 261  Q
    ||||||||||||||    
T  25849426 gggcttgatgccct 25849439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 42266528 - 42266593
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||| ||||||| | |  ||||||||||||||||||||||| |||||||||||||||||||||    
T  42266528 aagttgtctaagttgtacgttgttgagtccatgcatactcatttgaagttgagggcttgatgccct 42266593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 189 - 261
Target Start/End: Complemental strand, 9299 - 9227
Alignment:
Q  189 agatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||| ||||||||   || ||||||||  |||||||||||| |||||||||||||||||||||    
T  9299 agatgtcgaagttgattaagttgttggatgttgagtcattgcatactcattaaagttgagggcttgatgccct 9227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 17907857 - 17907968
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtct-aagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||||||| | ||||| |||||  |||||||||||||| || | ||| ||||||| ||||||| |||  | ||||||||||||| |||||| ||||||||    
T  17907857 aagttgtaagttgttgttccaagatattggagtcatataagtt-tctgaagttgtctaagttgtaagttgctgagtccatgcatgctcattaaagttgag 17907955  T
Q  249 ggcttgatgccct 261  Q
     ||||||||||||    
T  17907956 agcttgatgccct 17907968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 23418441 - 23418397
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  23418441 gttgagtccatgcatactcatttgaagttgagggcttgatgccct 23418397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 35026960 - 35027008
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtcta 197  Q
    ||||||||| ||||||||||||||||||||||||| ||| |||||||||    
T  35026960 taagttgtaagatgttgatccaaattattggagtcgtataagatgtcta 35027008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 13665354 - 13665464
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    ||||| || ||||||| ||||||  ||||||||||||| || |||  | ||| |  |||||| |||  |||||||||||||||||||| || ||||||||    
T  13665354 aagttttaagatgttgttccaaagcattggagtcatataagttgttgatgttatccaagttgtaagttgttgagtccatgcatactca-ttgagttgagg 13665452  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  13665453 gcttgatgccct 13665464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 13724629 - 13724739
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    ||||| || ||||||| ||||||  ||||||||||||| || |||  | ||| |  |||||| |||  |||||||||||||||||||| || ||||||||    
T  13724629 aagttttaagatgttgttccaaagcattggagtcatataagttgttgatgttatccaagttgtaagttgttgagtccatgcatactca-ttgagttgagg 13724727  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  13724728 gcttgatgccct 13724739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 18833474 - 18833351
Alignment:
Q  133 gttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcat 232  Q
    |||||||||||||||  |||||||| | ||| | ||| || |||||||||| ||  || |||| | |||||  |||||| |||  |||||||| ||||||    
T  18833474 gttggtctaagttgta-aagttgtaagttgtcgttccgaagtattggagtctta--agttgtcgatgttgtccaagttgtaagttgttgagtctatgcat 18833378  T
Q  233 actcatttaagttgagggcttgatgcc 259  Q
    ||||||||||||| |||||||||||||    
T  18833377 actcatttaagttaagggcttgatgcc 18833351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 22207351 - 22207284
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcat-ttaagttgagggcttgatgc 258  Q
    ||||||||||||||||||||   |  ||||||||||||||||||||| |||||||||||| |||||||    
T  22207351 tgtctaagttgtttaagttgttggttgttgagtccatgcatactcatattaagttgagggtttgatgc 22207284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 22419517 - 22419623
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    ||||||| |||| |||||||||||||| | |||| ||| ||| | ||| |||||| || |||  ||||||||||||||||| |||| | |||| ||||||    
T  22419517 tgtatgaagttgttccaaattattggatttatataagaggtcgatgtt-tttaagatgtaagttgttgagtccatgcatacacattcatgttgggggctt 22419615  T
Q  254 gatgccct 261  Q
    ||||||||    
T  22419616 gatgccct 22419623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 29763619 - 29763689
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| | |||| ||| ||||||||||    
T  29763619 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattatcgatggtga-ttgctgcata 29763689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 42818863 - 42818906
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||| ||||||||||    
T  42818863 gttgagtccatgcatactcatttacgttgagggattgatgccct 42818906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 21415217 - 21415314
Alignment:
Q  21 tgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtga 119  Q
    |||||||||||||||||| ||| || | ||| |||  |||||||||| ||| |||||||||||||| || ||||  ||| |||||||||||||| ||||    
T  21415217 tgaaagatgttgatatga-gttatacttgttgtatatgatgattattattgttgttgacttgctgcttattattatatgatgttgccttgctgttgtga 21415314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 22995794 - 22995752
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  22995794 ttgagtccatgcatactcattaaagttgggggcttgatgccct 22995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 28397501 - 28397459
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  28397501 ttgagtccatgcatactcattaaagttgggggcttgatgccct 28397459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 37515478 - 37515436
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  37515478 ttgagtccatgcatactcattaaagttgggggcttgatgccct 37515436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 17979457 - 17979498
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  17979457 tgagtccttgcatactcattaaagttgagggcttgatgccct 17979498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 21513397 - 21513356
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  21513397 tgagtccttgcatactcattaaagttgagggcttgatgccct 21513356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 22473638 - 22473597
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  22473638 tgagtccatgcatactcattaaagttgagggtttgatgccct 22473597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 36733581 - 36733618
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||||||||||||||| |||||||||||||||||    
T  36733581 tgagtccatgcatactcattaaagttgagggcttgatg 36733618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 38988447 - 38988406
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  38988447 gttgagtccatgcatactcattaaagttgagggtttgatgcc 38988406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 39019544 - 39019503
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  39019544 gttgagtccatgcatactcattaaagttgagggtttgatgcc 39019503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 21415341 - 21415409
Alignment:
Q  133 gttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcat-atgagatgtctaagt 200  Q
    ||||||| |||| ||| |||| ||| ||||||||||||| ||||||||||||| | |||||||||||||    
T  21415341 gttggtcaaagtcgttcaagtcgtaagatgttgatccaagttattggagtcataaagagatgtctaagt 21415409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 40493179 - 40493222
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  40493179 gttgagtccatgcatactcattcatgttgggggcttgatgccct 40493222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 31723757 - 31723794
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  31723757 tgagtccatgcatactcattaaagttgagggtttgatg 31723794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 36405975 - 36406016
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||| ||| |||||| ||||||||||||||    
T  36405975 tgagtccatgcatactaattaaagttgggggcttgatgccct 36406016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 5083324 - 5083364
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  5083324 gagtccatgcatattcatttaagttaggggcttgatgccct 5083364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 10012 - 10272
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10012 ttattaattatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgg 10111  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||    
T  10112 tgctgccttgctgtcgtgattaggatgctaatgttggcctaagttgtttaagtcgtaagacgttgatccaaattattggagtcatatgagatgtctaagt 10211  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||    
T  10212 tgtttaagttgtaagacgttgagtccatgcatactcatttaagttaagagcttgatgccct 10272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 9089 - 9346
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9089 ttattaatgatgctatgt-gtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgg 9187  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||    
T  9188 tgctgccttgatgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgaggtgtttaagt 9287  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9288 tatttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 9346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 9544 - 9800
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||    
T  9544 ttattaatgatgctatgttgtgaaagatgttaatatgaagttgtaatggttatattggatgattaccgttgatgttgacttgctgcatattatttaatgg 9643  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagt 200  Q
    || ||| || |||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9644 tgctgcattactgtcgtgattaggatgaaaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagt 9743  T
Q  201 tgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9744 tgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatg 9800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 59356 - 59599
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  59356 ttgtgaaagatgttgatatgaagttgtaattgttatattggatgattattgttgatgttgacttgctgcatattttttaatggtgttgccttgctgtcgt 59455  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagac 217  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||     
T  59456 gattaggatgctaatgttggtctaagttgtttaagttgcaagatgttgatccaaattattgaagtcatatgagatgtctaagttgtttaagttgtaagat 59555  T
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  59556 gttgagtccatgcatactcatttaatttgaggacttgatgccct 59599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 261
Target Start/End: Original strand, 41227492 - 41227740
Alignment:
Q  3 attaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtg 102  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  41227492 attaatgatgctatgttgtgaaagatgtttatatgaagttttaatggttatattggatgattattgttaatgttgacttgctgcataatatttaattgtg 41227591  T
Q  103 ttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttg 202  Q
     |||||||||||||||||||||||||||||          ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  41227592 ctgccttgctgtcgtgattaggatgctaat----------gttgtctaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg 41227681  T
Q  203 tttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41227682 tttaagttgcaacacgttgagtccatgcatactcatttaagttgagggcttgatgccct 41227740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 48301112 - 48300871
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  48301112 ttgtgaaagatgttgatatgaagttgtaatggttacatgagattattattgttgatgttgacttgctgcatattatttaatggtgttgtcttgttgtcgt 48301013  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagac 217  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||     
T  48301012 gattaggatgttaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagttgtttaagttttttaagttgtaagat 48300913  T
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
     ||||||||||||||||||||||||||| |||||||||||||    
T  48300912 tttgagtccatgcatactcatttaagtttagggcttgatgcc 48300871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 20587866 - 20587738
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  20587866 atgttggtctaagttgtttaagctgtaagatgttgatccaaattataggagtcatattaaatgtctaagttgtttaagttgtaagacgttgagtccatgc 20587767  T
Q  231 atactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||||||||    
T  20587766 atactcatttaagttgagggcttgatgcc 20587738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 20592404 - 20592276
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    |||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  20592404 atgttggtctaagttgtttaagctgtaagatgttgatccaaattataggagtcatattaaatgtctaagttgtttaagttgtaagacgttgagtccatgc 20592305  T
Q  231 atactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||||||||    
T  20592304 atactcatttaagttgagggcttgatgcc 20592276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 43543098 - 43542899
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgc---tgt 114  Q
    ||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| | | ||||| |||||||||||||||   |||    
T  43543098 ttgtgaaagatgttgatatgaagttgtaatgattgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccttgctgatgt 43542999  T
Q  115 cgtg----------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    | ||          |||| ||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  43542998 catgtattaatatcattaagatgctaatgttggtttaagttgtttaagttgtaagatgttgaaccaaattattggagtcataagagatgtctaagttgtt 43542899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 20634508 - 20634620
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  20634508 taagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagatgttgagtacatgcatactcatttaagttgag 20634607  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  20634608 ggcttgatgccct 20634620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 46382688 - 46382887
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcg- 116  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| ||||||||||| |||||  |     
T  46382688 ttgtgaaagatgttgatatgaagttgtaatggttttattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgccatgctgatgt 46382787  T
Q  117 ------------tgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
                | |||| ||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  46382788 aatgtattaatatcattaagatgctaatgttggtttaagttttttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 46382887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 35981821 - 35982019
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||||||||| ||||||||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||||||||| || ||    
T  35981821 ttgtgaaagatgcttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgttgcatattatttaatggtgttgccttgcggttgt 35981920  T
Q  118 gat-------taggatg-----ctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    ||        ||  |||     |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  35981921 gacgtattaatatcatgaagatctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcataagagatgcctaagttgtt 35982019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 28194582 - 28194824
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | || ||||| | | ||||| |||||||||||||||||  ||    
T  28194582 ttgtgaaagatgttgatatgaagttgtaatggttgtatttgatgattattgttgatgataacctgctgtaaattatttgatggtgttgccttgctgaggt 28194681  T
Q  118 gat-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||             || ||||||||||||||| ||||||||||||||| || ||||||| || ||||||||||||||||| ||||||||||||||| |    
T  28194682 gatgtattaatatcattaagatgctaatgttggtttaagttgtttaagttataagatgttggtctaaattattggagtcataagagatgtctaagttg-t 28194780  T
Q  205 taagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||   ||| |||||||||| |||||||||||||| ||||    
T  28194781 taagttgtttagatgttgagtccattgcatactcatttacgttg 28194824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 51274339 - 51274584
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||| ||||||| ||||||   || |||| | |||  ||| ||| ||    
T  51274339 ttgtgaaagatgttgatatgaagttgtaattgttatataagatgattattattgatggtgacttgatgcatatgtttaaatgtttttgttttgttgttgt 51274438  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |    
T  51274439 gatgaattaataccattaagatg-tctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgta 51274535  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  51274536 agatgttgagtctattgcatactcatttaagttgagggcttgatgccct 51274584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 43697361 - 43697120
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| | | ||||| |||||||| ||||| ||  ||    
T  43697361 ttgtgaaagatgctgatatgaagttgtaatggttttatttgatgattattgttgatgatgacttgctgtaaattatttgatggtgttaccttgttgatgt 43697262  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |             |||| ||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||| | |||||||||||| ||    
T  43697261 gatgtattaatatcattaagatgctaatgttggt-taagttgtttaagttataagatgttggtccaaattattggagtcataagtgatgtctaagtt-tt 43697164  T
Q  205 taagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||  |||| |||||||  | |||||||||||||| ||||    
T  43697163 taagttgttaagatgttgagtttattgcatactcatttacgttg 43697120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 20636836 - 20636734
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||| ||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||||| || ||| ||    
T  20636836 ttgtgaaagatgtttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatattatttaatggtgttgccctgttgttgt 20636737  T
Q  118 gat 120  Q
    |||    
T  20636736 gat 20636734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 146 - 246
Target Start/End: Original strand, 41305861 - 41305962
Alignment:
Q  146 gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagacgttgagtcca-tgcatactcatttaag 243  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||  |||| |||||||||| |||||||||||||| |    
T  41305861 gtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg-ttaagttgttaagatgttgagtccattgcatactcatttacg 41305959  T
Q  244 ttg 246  Q
    |||    
T  41305960 ttg 41305962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 35088586 - 35088526
Alignment:
Q  198 agttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35088586 agttgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 35088526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 16381203 - 16381096
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| |||||||||||||||||||||| |||||  ||||||| | ||| | ||||||| |||| |||||||||||||||||||||||| ||||||    
T  16381203 taagatgtaagatgttgatccaaattattggaatcata--agatgtcgatgtt-tctaagttgtaagatgttgagtccatgcatactcatttatgttgag 16381107  T
Q  249 ggcttgatgcc 259  Q
    |||||||||||    
T  16381106 ggcttgatgcc 16381096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 11809420 - 11809481
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg 211  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  11809420 aagttgtaagatgttgatccaaattattggagtcatatgagatgtgtaagttgtctaagttg 11809481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 51476158 - 51476029
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaa-gttgcaagacgttgagtccatgc 230  Q
    |||||||||||||||   |||||||| | ||||| |||||  ||||||||||||||  | |||  |||||||  || |||| |||  |||||||||||||    
T  51476158 tgttggtctaagttgca-aagttgtaagttgttgttccaagatattggagtcatataggttgttgaagttgtccaaagttgtaagttgttgagtccatgc 51476060  T
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||||    
T  51476059 atactcatttaagttgagggcttgatgccct 51476029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 23073114 - 23073053
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg 211  Q
    ||||| || |||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  23073114 aagttctaagatgttgatccaaattattggagtcatatgagatgtttaagttgtctaagttg 23073053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 23967736 - 23967626
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    ||||||||| | ||| | |||||| |||||||||| ||  || |||| | |||||  |||||| |||  |||||||||||||||||||||||||||||||    
T  23967736 taagttgtaagttgtcgttccaaagtattggagtctta--agttgtcgatgttgtccaagttgtaagttgttgagtccatgcatactcatttaagttgag 23967639  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  23967638 ggcttgatgccct 23967626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 38888023 - 38888107
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatg 257  Q
    ||||||||||||||||| |||  ||||||| ||||||| |||  ||||||||||||||||||||||| |||||||||| ||||||    
T  38888023 tattggagtcatatgagttgttgaagttgtctaagttgtaagttgttgagtccatgcatactcatttgaagttgagggtttgatg 38888107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 8276863 - 8276991
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  |||||  |||||||||||||| || |||  | ||||||||||||| | |  |||||||||| |||    
T  8276863 tgttggtctaagttgta-aagttgtaagttgttattccaagatattggagtcatataagttgtaga-gttgtttaagttgtacgttgttgagtccacgca 8276960  T
Q  232 tactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||    
T  8276961 tactcatttgaagttgagggcttgatgccct 8276991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 7052917 - 7053045
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatg-tctaagttgtttaagttgcaagacgttgagtccatg 229  Q
    ||||||||| |||||||  |||||||| | ||||| |||||  ||||||||||||||||| || |  ||||||| ||||||| |||  ||||| ||||||    
T  7052917 atgttggtcaaagttgtc-aagttgtaagttgttgttccaagatattggagtcatatgagttgttggaagttgtctaagttgtaagttgttgattccatg 7053015  T
Q  230 catactcattt-aagttgagggcttgatgc 258  Q
    |||| |||||| ||||||||||||||||||    
T  7053016 catattcatttgaagttgagggcttgatgc 7053045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 45754637 - 45754513
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||   |||||||| | ||||| |||||  ||||||| |||||| || |||  ||||||| ||||||| |||  | ||||||||||||    
T  45754637 tgttggtctaagttgca-aagttgtaagttgttgttccaagatattggaatcatataagttgttgaagttgtctaagttgtaagttgctgagtccatgca 45754539  T
Q  232 tactcatttaagttgagggcttgatg 257  Q
    |||||||  |||||||||||||||||    
T  45754538 tactcataaaagttgagggcttgatg 45754513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 13301953 - 13301841
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    ||||||||| | ||||| |||||  | |||||||| ||| || |||  ||||||| |||||||   |  |||||||||||||||||||||||||||||||    
T  13301953 taagttgtaagttgttgttccaagatgttggagtcgtataagttgttgaagttgtctaagttgttggttgttgagtccatgcatactcatttaagttgag 13301854  T
Q  249 ggcttgatgccct 261  Q
    || ||||||||||    
T  13301853 ggtttgatgccct 13301841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 24726505 - 24726379
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  |||||  |||||||||||||| || |||  | ||||| ||||||| |||  ||||||||||||||    
T  24726505 tgttggtctaagttgta-aagttgtaagttgttattccaagatattggagtcatataagttgtgga-gttgtctaagttgtaagttgttgagtccatgca 24726408  T
Q  232 tactcattt-aagttgagggcttgatgcc 259  Q
    ||||| ||| |||||||||||||||||||    
T  24726407 tactcgtttaaagttgagggcttgatgcc 24726379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 38057522 - 38057651
Alignment:
Q  130 aatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatg 229  Q
    ||||||||||||||||||  |||||||| | ||||  |||||  ||||||| |||||| || |||  ||||||| ||||||| | |  ||||||||||||    
T  38057522 aatgttggtctaagttgta-aagttgtaagttgttattccaagatattgga-tcatataagttgtg-aagttgtctaagttgtacgttgttgagtccatg 38057618  T
Q  230 catactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||||||||||||    
T  38057619 catactcatttgaagttgagggcttgatgccct 38057651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 4596810 - 4596853
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  4596810 gttgagtccatgcatactcatttacgttgagggcttgatgccct 4596853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 12328606 - 12328673
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctg 85  Q
    |||||||||| |||||||||||| |||||| |||||||  |||||||||| |||||| ||||||||||    
T  12328606 ttgtgaaagacgttgatatgaagatgtaattgttatatatgatgattattattgatggtgacttgctg 12328673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 20241916 - 20241873
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  20241916 gttgagtccatgcatactcatttacgttgagggcttgatgccct 20241873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 22124238 - 22124195
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  22124238 gttgagtccatgcatactcatttaagttgggggcttgatgccct 22124195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 48520287 - 48520244
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  48520287 gttgagtccatgcatgctcatttaagttgagggcttgatgccct 48520244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 21533971 - 21534081
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| |||||||||||||||||||||||| |||| ||||||| | ||  | |||| || |||  || |||| |||||||||||||| | |||| |    
T  21533971 taagatgtaagatgttgatccaaattattggagttatataagatgtcgatgt--tctaagatgtaagttgtcgagttcatgcatactcattcatgttggg 21534068  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  21534069 ggcttgatgccct 21534081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 21240164 - 21240228
Alignment:
Q  193 gtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    ||||||||||||||| |||   |  |||||||||||||||||||||| |||||||||||||||||    
T  21240164 gtctaagttgtttaatttgttggttgttgagtccatgcatactcattaaagttgagggcttgatg 21240228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 22349693 - 22349649
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  22349693 gttgagtccatgcatactcatttgaagttgagggcttgatgccct 22349649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 42912137 - 42912094
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  42912137 gttgagtccatgcgtactcatttacgttgagggcttgatgccct 42912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 44891678 - 44891635
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  44891678 gttgagtccatgcatactcattaaagttgagggtttgatgccct 44891635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 13528762 - 13528804
Alignment:
Q  220 tgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  13528762 tgagtccattgcatactcatttaagttgagggcttgatgccct 13528804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 42696901 - 42696773
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagtt-gtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||||||||||  |||||| | | ||||| |||||  ||||||| |||||| || |||  ||||| || ||||||| |||  | |||||||||||    
T  42696901 tgttggtctaagttgta-aagttgaa-gttgttgttccaagatattggaatcatataagttgttgaagtttgtctaagttgtaagttgatgagtccatgc 42696804  T
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    |||||||| || |||||||||||||||||||    
T  42696803 atactcatatatgttgagggcttgatgccct 42696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 14238499 - 14238548
Alignment:
Q  213 aagacgttgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  14238499 aagatgttgagtccattgcatactcatttaagttgagggtttgatgccct 14238548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 16059279 - 16059320
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  16059279 gttgagtccatgcatactcatttacgttgagggcatgatgcc 16059320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 18120652 - 18120611
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  18120652 tgagtccttgcatactcattaaagttgagggcttgatgccct 18120611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 24720763 - 24720804
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||| ||||||||||    
T  24720763 tgagtccatgcatactcattaaagttgagggtttgatgccct 24720804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 28477652 - 28477721
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||| ||||||   |  ||||||||| |||||||||||| |||||||||| ||||||||||    
T  28477652 tgtctaagttgttaaagttgttggttgttgagtccttgcatactcattaaagttgagggattgatgccct 28477721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 52954436 - 52954535
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||| ||||||||| |||| ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | ||||  ||||||||||    
T  52954436 gatgttgttccaaaatattggagttatataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttggaggcttgatgc 52954534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 19675838 - 19675795
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||    
T  19675838 gttgagtccatgcatactcatttacgttgagggtttgattccct 19675795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 17904018 - 17904060
Alignment:
Q  220 tgagtccatgcatactcatttaa-gttgagggcttgatgccct 261  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  17904018 tgagtccatgcatactcatctaaagttgagggcttgatgccct 17904060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 51323406 - 51323372
Alignment:
Q  224 tccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||| ||||||||||||||||||    
T  51323406 tccatgcatactcattaaagttgagggcttgatgc 51323372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 14793392 - 14793429
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  14793392 tgagtccatgcatactcattaaagttgggggcttgatg 14793429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 14800472 - 14800439
Alignment:
Q  228 tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| ||||||||||    
T  14800472 tgcatactcatttaagttgagggtttgatgccct 14800439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 14809346 - 14809313
Alignment:
Q  228 tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| ||||||||||    
T  14809346 tgcatactcatttaagttgagggtttgatgccct 14809313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 20316410 - 20316366
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||| |||||| |||||||||| |||||||||||||||||||||    
T  20316410 gttgaatccatggatactcattttaagttgagggcttgatgccct 20316366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 50614285 - 50614329
Alignment:
Q  218 gttgagtccatgcatactcattta-agttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |  |||||||||||||||||||    
T  50614285 gttgagtccatgcatactcattcattgttgagggcttgatgccct 50614329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 50622113 - 50622157
Alignment:
Q  218 gttgagtccatgcatactcattta-agttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |  |||||||||||||||||||    
T  50622113 gttgagtccatgcatactcattcattgttgagggcttgatgccct 50622157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 8172 - 8365
Alignment:
Q  1 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  8172 ttattaatgatgctatgttgtgaaagatgttgatatgaagttgtaatggttatattggatgattgttgttgatgttgacttgctgcatattatttaatgg 8271  T
Q  101 tgttgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgt 194  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8272 tgctgccttgctgtcgtgattaggatgctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgt 8365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 169; Significance: 1e-90; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 76991 - 76760
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||| |||||||||||| ||||||||||||||    
T  76991 ttgtgaaagatgtggatatgaagttgtaatggttatattggatgattattgttgattttgatttgctacatattatttaatggtgctgccttgctgtcgt 76892  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagac 217  Q
    ||||||||||||||||||||||||||         ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  76891 gattaggatgctaatgttggtctaag---------ttgtaagatgttgatccaaattattggagtcatatgagatgtcaaagttgtttaagttgtaagac 76801  T
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  76800 gttgagtgcatgcatactcatttaagttgagggcttgatgc 76760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 446506 - 446396
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    ||||||||  |||||| |||||| |||||||||||||| || |||  | |||||  |||||| |||  ||| | |||||||||||||| || ||||||||    
T  446506 aagttgtaaaatgttgttccaaagtattggagtcatataagttgttgatgttgtccaagttgtaagttgttaattccatgcatactca-ttgagttgagg 446408  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  446407 gcttgatgccct 446396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 497377 - 497337
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  497377 ttgagtccatgcatactcattaaagttgggggcttgatgcc 497337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 162; Significance: 2e-86; HSPs: 3)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 20 - 253
Target Start/End: Complemental strand, 3163 - 2939
Alignment:
Q  20 gtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtga 119  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||| |    
T  3163 gtgaaaaatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatgttgttgccttgttgtcgtta 3064  T
Q  120 ttaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgt 219  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||         | ||||||||| |||||||    
T  3063 ttaggatgctaatgtttgtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgaga---------tttttaagttgtaagacgt 2973  T
Q  220 tgagtccatgcatactcatttaagttgagggctt 253  Q
    |||||||||||||||| |||||||||||||||||    
T  2972 tgagtccatgcatactaatttaagttgagggctt 2939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 16699 - 16658
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  16699 tgagtccatgcatactcatataagttgagggcttgatgccct 16658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 11225 - 11290
Alignment:
Q  194 tctaagttgtttaagttgcaagacgttgagtccatgcatactcat-ttaagttgagggcttgatgc 258  Q
    ||||||||||||||||||   |  | ||||||||||||||||||| ||||||||||||||||||||    
T  11225 tctaagttgtttaagttgttggttgctgagtccatgcatactcatattaagttgagggcttgatgc 11290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 2480 - 2664
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||    
T  2480 ttgtgaaagatgctcataagaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatttaatagtgttgttttgctgtcgt 2579  T
Q  118 gattaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  2580 gattaggatgctaatgttggtctaagttgtttaaattgtaagattttgatccaaattattggagtcatatgaga-gtctaagttgt 2664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 57936 - 57806
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  57936 atgttggtctaagttgtttaagttgtaagatgttgatccaaattactggagtcatatgagatgtctaagttgtttaagttgtaagacattgagtccatgc 57837  T
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||| |||||||||||||||    
T  57836 atactcatttaagttaagggcttgatgccct 57806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 5507 - 5636
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||    
T  5507 ttgtgaaaggtgttgatatgaagttgtaatgtttatattggatgattattgttgatgttaacttgctgcatattatttaatggtgctgccttgctgtcgt 5606  T
Q  118 gattaggatgctaatgttggtctaagttgt 147  Q
    ||||||||||||||||||||||||||||||    
T  5607 gattaggatgctaatgttggtctaagttgt 5636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 906 - 777
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||||||||| ||||    
T  906 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcatattatctaatcgtgctgccttgctatcgt 807  T
Q  118 gattaggatgctaatgttggtctaagttgt 147  Q
    ||||||||||||||||||||||||||||||    
T  806 gattaggatgctaatgttggtctaagttgt 777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 107; Significance: 1e-53; HSPs: 4)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 6429 - 6673
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||| ||||||||||||||   || |||||||||| |||||| | ||    
T  6429 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatggtgttgtcttgctattgt 6528  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || || |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6529 gatgaattaataccattaagatg-tc-aagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgta 6625  T
Q  214 agacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6626 agacgttgagttcatgcatactcatttaagttgagggcttgatgccct 6673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 131 - 222
Target Start/End: Original strand, 5577 - 5667
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttga 222  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||    
T  5577 atgttggtc-aagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatctctaagttgtttaagttgtaagatgttga 5667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 5639 - 5712
Alignment:
Q  138 tctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg 211  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5639 tctaagttgtttaagttgtaagatgttgatccaaattattgcagtcatatgagatgtctaagttgtttaagttg 5712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 211
Target Start/End: Original strand, 5751 - 5821
Alignment:
Q  141 aagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg 211  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5751 aagttgtttaagttgtaagatgttgatccaaattattgcagtcatatgagatgtctaagttgtttaagttg 5821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 2425 - 2666
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||| ||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||    
T  2425 ttgtgaaagatgtttatatgaagtcgtaatggttgtatttgacgattattgttgatgttgacttgctgcattttatttaatggtgttgccttgcggttgt 2524  T
Q  118 gat-------taggatg-----ctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgttt 205  Q
    ||        ||  |||     |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||    
T  2525 gacgtattaatatcatgaagatctaatgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg-tt 2623  T
Q  206 aagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    ||||||  |||| |||||||||| |||||||||||||| ||||    
T  2624 aagttgttaagatgttgagtccattgcatactcatttacgttg 2666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 2768 - 2882
Alignment:
Q  147 tttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttg 246  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2768 tttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgtaagacgttgagtccatgcatactcatttaagttg 2867  T
Q  247 agggcttgatgccct 261  Q
    |||| ||||||||||    
T  2868 agggtttgatgccct 2882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 85236 - 84994
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | || || |||||||||||||||||   |    
T  85236 ttgtgaaagatgttgatatgaagttgtaatagttgtatttgatgattattgttgatgttgacttgctgcaaattaattgatggtgttgccttgctgattt 85137  T
Q  118 gat-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||             ||  |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||| |    
T  85136 gatgtattaatatcattaatatgctaatgttggtttaagttgtttaagttttaagatgttgatccaaattattggagtcataagagatgtctaagttg-t 85038  T
Q  205 taagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||  |||| |||||||||| |||||||||||||| ||||    
T  85037 taagttgttaagatgttgagtccattgcatactcatttacgttg 84994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 43917 - 44159
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| | | ||||| ||| |||||||||||||  ||    
T  43917 ttgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctgtaaattatttgatgatgttgccttgctgatgt 44016  T
Q  118 gat-------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||             || ||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||||||| |    
T  44017 gatgtattaatatcattaagatgctaatgttggtttaagttgtttaagttataagatgttggtccaaattattggagtcataagagatgtctaagttg-t 44115  T
Q  205 taagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||  |||| |||||||||| |||||||||||||| ||||    
T  44116 taagttgttaagatgttgagtccattgcatactcatttacgttg 44159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 145923 - 145793
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tg 229  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||| |||||||||| ||    
T  145923 atgttggtctaagttgtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaaattgtaagatgttgagtccattg 145825  T
Q  230 catactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| ||||||||||    
T  145824 catactcatttaagttgagggtttgatgccct 145793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 4e-47; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 29915206 - 29915405
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | |||| ||||| ||||||||||||  ||    
T  29915206 ttgtgaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattattgaatggcgttgccttgctgatgt 29915305  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |             |||| ||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  29915306 gatgtattaatatcattaagatgctaatgtttatttaagttgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 29915405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 12122272 - 12122517
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| |||||| |||||||| |||||   || |||| || || |||||||| ||    
T  12122272 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatggtgacttgcggcatatgtttaaatgatgatgtcttgctgttgt 12122371  T
Q  118 gattagg--atgctaatgttg-gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaa 214  Q
    ||| |    || | | ||    || ||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||    
T  12122372 gatgaattaataccattgagatgtttaagttgtt-aagttgtaagatgttgatccaaattatttgagtcatatgagatgtctaagttg-ttaagttgtaa 12122469  T
Q  215 gacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||    
T  12122470 gatgttgagtccattgcatactcatttaagttgagggcttgatgccct 12122517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 31455056 - 31454934
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactc 236  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||||    
T  31455056 gtctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgtaagatgttgagttcatgcatactc 31454959  T
Q  237 atttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||    
T  31454958 atttaagttgagggcttgatgccct 31454934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 21555130 - 21555376
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||| || |||||||||| |||||||  |||||||||| |||||| ||||||||||||||   || |||| ||||| |||||||| ||    
T  21555130 ttgtgaaagacgttgacataaagttgtaattgttatatatgatgattattattgatggtgacttgctgcatatgtttaaatgatgttgtcttgctgttgt 21555229  T
Q  118 gattagg--atgctaatgttg--gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    ||| |    || | | |   |  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| | |    
T  21555230 gatgaattaataccatttaagatgtctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgta 21555327  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  21555328 agatgttgagtccattgcatactcatttaagttgagggcttgataccct 21555376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 31455669 - 31455547
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactc 236  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| | |||| ||||||| |||||||||||    
T  31455669 gtctaagttgtt-aagttgtaagatgttgatacaaattattggagtcatatgagatgtctaagttg-ttaagtcgtaagatgttgagttcatgcatactc 31455572  T
Q  237 atttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||    
T  31455571 atttaagttgagggcttgatgccct 31455547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 21557796 - 21558041
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| |||||  ||||||||||||||   || |||| ||||| ||||||||  |    
T  21557796 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattattattgatagtgacttgctgcatatgtttaaatgatgttgtcttgctgttat 21557895  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||| |      
T  21557896 gatgaattaataccattaagatg-tctaagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatgtccaacttg-ttaagtcgtt 21557992  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  21557993 agatgttgagtccattgcatactcatttaagttgagggcttgatgccct 21558041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 25743744 - 25743632
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| |||||  |||||||||||||||||||||||||||||  | ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  25743744 taagatgtaagatgtcaatccaaattattggagtcatatgagatgttcacgttgtttaagttgtaagaagttgagtccatgcatactcatttaagttgag 25743645  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  25743644 ggcttgatgccct 25743632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 137 - 261
Target Start/End: Complemental strand, 17875193 - 17875070
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatact 235  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||| |||||| | |||| | |||||||| ||||||||    
T  17875193 gtctaagttgtt-aagttgtaagatattgatccaaattattggagtcatataagatgtctaagttg-ttaagtcgtaagatgctgagtccattgcatact 17875096  T
Q  236 catttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||    
T  17875095 catttaagttgagggcttgatgccct 17875070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 5889308 - 5889403
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| | | ||||| |||||||||||||||||    
T  5889308 ttgtgaaagatgctgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctgtaaattatttgatggtgttgccttgctg 5889403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 25250760 - 25250890
Alignment:
Q  130 aatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatg 229  Q
    ||||||||||||||||||  |||||||| | ||||| |||||  |||||||||||||| || |||  ||||||| ||||||| |||  ||||||||||||    
T  25250760 aatgttggtctaagttgta-aagttgtaagttgttgttccaagatattggagtcatataagttgttgaagttgtctaagttgtaagttgttgagtccatg 25250858  T
Q  230 catactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| ||||||||||||||||||||||    
T  25250859 catactcatataagttgagggcttgatgccct 25250890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 130 - 261
Target Start/End: Original strand, 25314545 - 25314675
Alignment:
Q  130 aatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatg 229  Q
    ||||||||||||||||||  |||||||| | ||||| |||||  |||||||||||||| || |||  ||||||| ||||||| |||  ||||||||||||    
T  25314545 aatgttggtctaagttgta-aagttgtaagttgttgttccaagatattggagtcatataagttgttgaagttgtctaagttgtaagttgttgagtccatg 25314643  T
Q  230 catactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| ||||||||||||||||||||||    
T  25314644 catactcatataagttgagggcttgatgccct 25314675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 21741666 - 21741916
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||| | ||||||| | ||||||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||    
T  21741666 ttgtgaaagatgcttatatgaaatcgtaatggttgtatttgacgattattgttgatgttgacttgctgcatattatttaatggtgttgccttacggttgt 21741765  T
Q  118 g----attaggat--------gctaatgttggtctaagttgtttaagttg---------tatgatgttgatccaaattattggagtcatatgagatgtct 196  Q
    |    ||||  ||         ||||||||||| ||||||||||||||||         || |||||||  ||||||||||||||||||| |||||||||    
T  21741766 gacgtattaatatcatgaagatctaatgttggtttaagttgtttaagttgtttaagttataagatgttggcccaaattattggagtcataagagatgtct 21741865  T
Q  197 aagttgtttaagttgcaagacgttgagtcca-tgcatactcatttaagttg 246  Q
    |||||||| || |   |||| |||||||||| |||||||||||||| ||||    
T  21741866 aagttgttaaattgttaagatgttgagtccattgcatactcatttacgttg 21741916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 261
Target Start/End: Complemental strand, 15796441 - 15796331
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| |||||||||||||||||||||| |||||  ||||||| | ||| | ||||||| |||| |||||||||||||||||||||||| ||| ||    
T  15796441 taagatgtaagatgttgatccaaattattggaatcata--agatgtcgatgttttctaagttgtaagatgttgagtccatgcatactcatttatgtttag 15796344  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  15796343 ggcttgatgccct 15796331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 36460271 - 36460178
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgc 111  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| || |||||||||||||||||| ||||||||||||||| |||||    
T  36460271 ttgtgaaagacgttgatatgaaattgtaattgttatatatgatgattattattaatgttgacttgctgcatattatttaatggtgttgtcttgc 36460178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 19920782 - 19920725
Alignment:
Q  200 ttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19920782 ttgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatg 19920725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 258
Target Start/End: Original strand, 36509696 - 36509805
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| | ||||| |||||  ||||||||||||||||| |||  ||||||| ||||||| ||| ||||||||||||||||| |||||| ||||||||    
T  36509696 aagttgtaagttgttgttccaagatattggagtcatatgagttgttgaagttgtctaagttgtaagtcgttgagtccatgcatattcatttgaagttgag 36509795  T
Q  249 ggcttgatgc 258  Q
    ||||||||||    
T  36509796 ggcttgatgc 36509805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 21871694 - 21871763
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 87  Q
    ||||||| |||| |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  21871694 ttgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctgca 21871763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 21875974 - 21876043
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgca 87  Q
    ||||||| |||| |||||||||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  21875974 ttgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctgca 21876043  T

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Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 30615725 - 30615669
Alignment:
Q  148 ttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  30615725 ttaagttgtaagatgttgatccaaattattggagtcgtatgagatgtctaagttgtt 30615669  T

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Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 20470013 - 20470124
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||| || ||||||| ||| || |||  ||||||| ||||||| | |  | ||||||||||||||||||||||||||||||    
T  20470013 aagttgtaagttgttgttccaaaatactggagtcgtataagttgttgaagttgtctaagttgtaggttgctgagtccatgcatactcatttaagttgagg 20470112  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  20470113 gcttgatgccct 20470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 5889446 - 5889534
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagacgttgagtcca-tgcatactcatttaagttg 246  Q
    ||||||| |||||||||||||||||||| ||||||||||||||| ||||||||  |||| |||||||||| |||||||||||||| ||||    
T  5889446 gatgttggtccaaattattggagtcataagagatgtctaagttg-ttaagttgttaagatgttgagtccattgcatactcatttacgttg 5889534  T

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Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 21406566 - 21406665
Alignment:
Q  161 tgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgcc 259  Q
    ||||| |||||  ||| ||||||| ||||| |||  ||||||| ||||||| |||  ||||||||||||||||||||||| |||||||||||||||||||    
T  21406566 tgttgttccaagatatcggagtcacatgagttgttgaagttgtctaagttgtaagttgttgagtccatgcatactcatttgaagttgagggcttgatgcc 21406665  T

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Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 24212469 - 24212398
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||| | |||||| ||||||||||||||    
T  24212469 ttgtgaaagacgttgatatgaagttgtaattgttatatatgatgattaatattgatggtgacttgctgcata 24212398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 30615857 - 30615786
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||||||||||| |||||| | ||||||||||  ||||| ||||||||||||||    
T  30615857 ttgtgaaagacgttgatatgaagttgtaattgttataattgatgattattaatgatggtgacttgctgcata 30615786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 35852724 - 35852653
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||| ||||||| |||||||  |||||||||| |||||| || |||||||||||    
T  35852724 ttgtgaaagacgttgatatgaaattgtaattgttatatacgatgattattattgatggtggcttgctgcata 35852653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 17875310 - 17875244
Alignment:
Q  23 aaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    ||||| |||||||||||||| |||| |||||||  |||||||||| |||||| ||||||||||||||    
T  17875310 aaagacgttgatatgaagttctaattgttatatatgatgattattattgatggtgacttgctgcata 17875244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 8504700 - 8504741
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  8504700 tgagtccatgcatactcattaaagttgagggcttgatgccct 8504741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 14026867 - 14026908
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  14026867 tgagtccatgcatactcattaaagttgagggcttgatgccct 14026908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 25742923 - 25742882
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  25742923 tgagtccatgcatactcattcaagttgagggcttgatgccct 25742882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 21618954 - 21619018
Alignment:
Q  193 gtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatg 257  Q
    |||||||||||||||||||   |  |||||||||||||||||||||| |||||||||| ||||||    
T  21618954 gtctaagttgtttaagttgttggttgttgagtccatgcatactcattaaagttgagggtttgatg 21619018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 21731564 - 21731670
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| |||| || |||||||||||||||| | || ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||    
T  21731564 tgtaagatgatgttccaaattattggagttacataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggctt 21731662  T
Q  254 gatgccct 261  Q
    ||||||||    
T  21731663 gatgccct 21731670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 21809684 - 21809790
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| |||| || |||||||||||||||| | || ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||    
T  21809684 tgtaagatgatgttccaaattattggagttacataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggctt 21809782  T
Q  254 gatgccct 261  Q
    ||||||||    
T  21809783 gatgccct 21809790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 25575763 - 25575869
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| ||||||| |||||| ||||||||| |||| ||||||| | ||| | |||| |  |||  |||||||||||||||||||||| || ||| ||||||    
T  25575763 tgtaagatgttgttccaaaatattggagttatataagatgtcgatgtt-tctaagatttaagttgttgagtccatgcatactcattcaaattgggggctt 25575861  T
Q  254 gatgccct 261  Q
    ||||||||    
T  25575862 gatgccct 25575869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 29914384 - 29914345
Alignment:
Q  222 agtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29914384 agtccatgcatactcattaaagttgagggcttgatgccct 29914345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 261
Target Start/End: Original strand, 25578149 - 25578242
Alignment:
Q  167 tccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||| ||||||||| |||| ||||||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||||||||||    
T  25578149 tccaaaatattggagttatataagatgtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcacgttgggggcttgatgccct 25578242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 26761525 - 26761487
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  26761525 tgagtccatgcatactcattaaagttgagggcttgatgc 26761487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 20198711 - 20198752
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  20198711 tgagtccttgcatactcattaaagttgagggcttgatgccct 20198752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 16227431 - 16227393
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||||| ||| ||||||||    
T  16227431 gagtccatgcatactcatttaagttgggggtttgatgcc 16227393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 20565533 - 20565471
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||||| ||||||| |||  | ||||||||||||||||||||| |||||||||| |||||||    
T  20565533 aagttgtctaagttgtaagttgatgagtccatgcatactcatttaaagttgagggtttgatgc 20565471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 21330512 - 21330554
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| |||||| |||||||    
T  21330512 ttgagtccatgcatactcattaaagttgggggcttaatgccct 21330554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 23469751 - 23469713
Alignment:
Q  223 gtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  23469751 gtccatgcatactcatataagttgggggcttgatgccct 23469713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 26749086 - 26749048
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  26749086 tgagtccatgcataatcattaaagttgagggcttgatgc 26749048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 6551462 - 6551506
Alignment:
Q  218 gttgagtccatgcatactcatttaa-gttgagggcttgatgccct 261  Q
    |||||||||||||||||| || ||| |||||||||||||||||||    
T  6551462 gttgagtccatgcatacttatctaaagttgagggcttgatgccct 6551506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 10953069 - 10953025
Alignment:
Q  218 gttgagtccatgcatactca-tttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  10953069 gttgagtccatgcatactcattttaagttgagggtttgctgccct 10953025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 16605390 - 16605430
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||| ||||| |||||| ||||||||||||||    
T  16605390 gagtccatgcataatcattaaagttgggggcttgatgccct 16605430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 23202699 - 23202739
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||| | |||| ||||||||||||||    
T  23202699 gagtccatgcatactcattcatgttgggggcttgatgccct 23202739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 92; Significance: 9e-45; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 362990 - 362795
Alignment:
Q  21 tgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtgat 120  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| | | || || |||||||||||||||||  |||||    
T  362990 tgaaagatgttgatatgaagttgtaatgattgtattagatgattattgttgatgttgacttgctgtaaattaattgatggtgttgccttgctgatgtgat 362891  T
Q  121 -------------taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
                 || ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||    
T  362890 gtattaatatcattaagatgctaatgttggtttaagttgtttaagttgtaagatgttgatccaaattattggattcataagagatgtctaagttgt 362795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 109265 - 109225
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  109265 gagtccatgcatactcatttaagttgagggcttgatgccct 109225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 259
Target Start/End: Complemental strand, 332326 - 332230
Alignment:
Q  162 gttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||| |||||||||||||||| |||| |||||||   ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||||||||    
T  332326 gttgttccaaattattggagttatataagatgtcggtgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggcttgatgcc 332230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 14440 - 14198
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtg 118  Q
    ||||||||| ||||||||||||||||||| |||||||  |||||||||| |||||| ||||||| ||||||   || |||| ||||| |||||||| |||    
T  14440 tgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgctgttgtg 14341  T
Q  119 at----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaa 214  Q
    ||    ||  |   | | | || ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||    
T  14340 atgaattaataccattaagatg-tctaagttgtt-aagttgtaagattttgatccaaattattggagtcatatgagatgtctaagttg-ttaagtcgtaa 14244  T
Q  215 gacgttgagtcca-tgcatactcatttaagttgagggcttgatgcc 259  Q
    || |||||||||| ||||||||||||||||||||||||||||||||    
T  14243 gatgttgagtccattgcatactcatttaagttgagggcttgatgcc 14198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 3033 - 2791
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| | | ||| | |||||||||||||||||  ||    
T  3033 ttgtgaaagatgttgatatgaagttgtaatggttgtatttgatgattattgttgatgatgacttgctgtaaattatatgatggtgttgccttgctgatgt 2934  T
Q  118 g-------------attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |             |||| ||||||||||||||| |||||| |||||||| || ||||||| || ||||||||||||||||| |||||||||||||||||    
T  2933 gatgtattaatatcattaagatgctaatgttggtttaagttttttaagttataagatgttggtctaaattattggagtcataagagatgtctaagttgtt 2834  T
Q  205 taagttgcaagacgttgagtcca-tgcatactcatttaagttg 246  Q
     |  ||  |||| ||||||| || |||||||||||||| ||||    
T  2833 aagtttttaagatgttgagtgcattgcatactcatttacgttg 2791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 6810 - 6947
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||||||| |||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||||||||||| |||||| |||||||    
T  6810 ttgtgaaagacgttgatatggagttgtaatgattatatttgatgattattgttcatgttgacttgctgcatattatttaatggtgctgccttactgtcgt 6909  T
Q  118 gattagga-tgctaatgttggtctaagttgtttaagttg 155  Q
    |||||||| || ||||| |||||||||||||||||||||    
T  6910 gattaggattgataatg-tggtctaagttgtttaagttg 6947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 46923 - 47050
Alignment:
Q  119 attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacg 218  Q
    |||| ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| |||||||| || | |    
T  46923 attaagatgctaatgttggtctaagttgtttaagttataagatgttgatccaaattgttggagtcatatgagatgtctaagttg-ttaagttgtaaaatg 47021  T
Q  219 ttgagtcca-tgcatactcatttaagttg 246  Q
    ||||||||| |||||||||||||| ||||    
T  47022 ttgagtccattgcatactcatttacgttg 47050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 1667 - 1425
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||||| ||||||||||||||||||| |||||||  |||||||||| |||||| ||||||| ||||||   || |||| ||||| |||| ||| ||    
T  1667 ttgtgaaagacgttgatatgaagttgtaattgttatataagatgattattattgatggtgacttgatgcatatgtttaaatgatgttgtcttgttgttgt 1568  T
Q  118 gat----taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgca 213  Q
    |||    ||  |   | | | || ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||| | |    
T  1567 gatgaattaataccattaagatg-tctaagttgtt-aagttgtaagatgttgatccaaattattggagttatatgagatgtctaagttg-ttaagtcgta 1471  T
Q  214 agacgttgagtcca-tgcatactcatttaagttgagggcttgatgc 258  Q
    ||| || ||||| | ||||||||||| |||||||||||||||||||    
T  1470 agatgtcgagtctattgcatactcatgtaagttgagggcttgatgc 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 241
Target Start/End: Complemental strand, 106439 - 106316
Alignment:
Q  119 attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagac 217  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||||||  ||||     
T  106439 attaagatgctaatgttggtttaagttgtttaagttgtaagatgttgatccaagttattggagtcataagagatgtctaagttg-ttaagttgttaagat 106341  T
Q  218 gttgagtcca-tgcatactcattta 241  Q
    |||||||||| ||||||||||||||    
T  106340 gttgagtccattgcatactcattta 106316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 261
Target Start/End: Original strand, 19320 - 19441
Alignment:
Q  141 aagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagacgttgagtcca-tgcatactcat 238  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||| |||||||||| |||||||||||    
T  19320 aagttgttcaagtcgtaagatgttgatccaaattattggagtcatatgagatgtctaagttg-ttaagttgttaagatgttgagtccattgcatactcat 19418  T
Q  239 ttaagttgagggcttgatgccct 261  Q
    |||||||||||| ||| ||||||    
T  19419 ttaagttgagggtttgttgccct 19441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 15478 - 15579
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||| |||||||||||||||||  || |||||||| |||||||||  |||||||||| ||||||||| |||||||||| || ||||||| ||| ||    
T  15478 ttgtgaaaaatgttgatatgaagttgcgattgttatattcgatgattatcattgatgttgatttgctgcat-atatttaatgttgatgccttgttgttgt 15576  T
Q  118 gat 120  Q
    |||    
T  15577 gat 15579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 24536 - 24637
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgt 117  Q
    |||||||| |||||||||||||||||  || |||||||| |||||||||  |||||||||| ||||||||| |||||||||| || ||||||| ||| ||    
T  24536 ttgtgaaaaatgttgatatgaagttgcgattgttatattcgatgattatcattgatgttgatttgctgcat-atatttaatgttgatgccttgttgttgt 24634  T
Q  118 gat 120  Q
    |||    
T  24635 gat 24637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 36181 - 36248
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctg 85  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36181 ttgtgaaagatgttgatatgaagttgtaatggttatattagatgattattgttgatgttgacttgctg 36248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 6043 - 5945
Alignment:
Q  163 ttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||| |||||||||| ||| ||||||  | ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  6043 ttgatccaaactattggagtcgtataagatgttcatgttgtttaagttgtaagatgttgattccatgcatactcatttaagttgagggcttgatgccct 5945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 11002 - 11092
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgcct 108  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | | ||||| ||||||||||||    
T  11002 ttgtaaaagatgttgatatgaagttgtaatggttgtattagatgattattgttgatgttgacttgctgtaaattatttgatggtgttgcct 11092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 75928 - 76040
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    |||| |||| ||||||| |||||| | |||||||||||| ||||||| | ||||| ||||||  |||| |||||||||||||||||| ||||||||||||    
T  75928 taagatgtaagatgttgttccaaaatgttggagtcatataagatgtcgatgttgtctaagttataagatgttgagtccatgcatactgatttaagttgag 76027  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  76028 ggcttgatgccct 76040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 65943 - 65981
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  65943 tgagtccatgcatactcattaaagttgagggcttgatgc 65981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 78292 - 78356
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  78292 aagttgtttaagttgtaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 78356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 243 - 141
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagacgttgagtcca-tgcatactcatttaa 242  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||  |||| |||||||||| ||||||||||||||     
T  243 tgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg-ttaagttgttaagatgttgagtccattgcatactcatttac 145  T
Q  243 gttg 246  Q
    ||||    
T  144 gttg 141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 203
Target Start/End: Complemental strand, 414 - 232
Alignment:
Q  33 atatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgcct--tgctgtcgtg----------at 120  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||||||| || | | ||||  ||||||||||||  || |||  ||          ||    
T  414 atatgaagttataatgattatatttgatgattattgttgatgttgacttgttgtaaattattcgatggtgttgcctgctgatgtgatgtattaatatcat 315  T
Q  121 taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    || ||||||||||||||| ||||| |||| |||| || ||||||| ||||| |||||||||||||||||||||| ||||||||    
T  314 taagatgctaatgttggtttaagtcgtttgagttataagatgttggtccaatttattggagtcatatgagatgtttaagttgt 232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 23657 - 23759
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttg-caagacgttgagtcca-tgcatactcatttaa 242  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||  |||| |||||||||| ||||||||||||||     
T  23657 tgtttaagttgtaagatgttgatccaaattattggagtcataagagatgtctaagttg-ttaagttgttaagatgttgagtccattgcatactcatttac 23755  T
Q  243 gttg 246  Q
    ||||    
T  23756 gttg 23759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 203
Target Start/End: Original strand, 23486 - 23668
Alignment:
Q  33 atatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgcct--tgctgtcgtg----------at 120  Q
    |||||||||| ||||| ||||||| ||||||||||||||||||||||||| || | | ||||  ||||||||||||  || |||  ||          ||    
T  23486 atatgaagttataatgattatatttgatgattattgttgatgttgacttgttgtaaattattcgatggtgttgcctgctgatgtgatgtattaatatcat 23585  T
Q  121 taggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    || ||||||||||||||| ||||| |||| |||| || ||||||| ||||| |||||||||||||||||||||| ||||||||    
T  23586 taagatgctaatgttggtttaagtcgtttgagttataagatgttggtccaatttattggagtcatatgagatgtttaagttgt 23668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 298 - 205
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgc 111  Q
    |||||||||| ||||||||||| ||||||| |||||||  ||| |||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  298 ttgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgccttgc 205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 4716 - 4623
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgc 111  Q
    |||||||||| ||||||||||| ||||||| |||||||  ||| |||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  4716 ttgtgaaagacgttgatatgaaattgtaattgttatatatgattattattattgatgttgacttgatgcatattatttaatggtgttgccttgc 4623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 10874 - 10759
Alignment:
Q  137 gtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtcca-tgcatact 235  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||| ||||||  |||||| | |||| |||||||||| ||||||||    
T  10874 gtctaagttgtt-aagttgtaagatgttgatccaaattattggagttatatgaggtgtataagtt-attaagtcgtaagatgttgagtccattgcatact 10777  T
Q  236 catttaagttgagggctt 253  Q
    |||||| |||||||||||    
T  10776 catttaggttgagggctt 10759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 10996 - 10900
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgt 114  Q
    |||||||||| ||||||||||| || |||| |||||||  |||||||||| |||||  ||||||||||||||   || |||| ||||| ||||||||    
T  10996 ttgtgaaagacgttgatatgaatttttaattgttatatatgatgattattattgattgtgacttgctgcatatgtttaaatgatgttgtcttgctgt 10900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 15400 - 15500
Alignment:
Q  161 tgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccc 260  Q
    ||||| |||||  ||||||||||||||||| |||  ||||||| ||||||| |||  || ||||||||||||||||||||||||||||||||||||||||    
T  15400 tgttgttccaagatattggagtcatatgagttgttgaagttgtctaagttgtaagttgtcgagtccatgcatactcatttaagttgagggcttgatgccc 15499  T
Q  261 t 261  Q
    |    
T  15500 t 15500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 95479 - 95340
Alignment:
Q  119 attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagtt-gtttaagttgcaagac 217  Q
    |||| ||||| |||||||||||||||||   |||| ||| ||||||| ||||| ||||||||||||||| || |||  ||||| || ||||||| |||      
T  95479 attaagatgcaaatgttggtctaagttgca-aagtcgtaagatgttgttccaagttattggagtcatataagttgttcaagtttgtctaagttgtaagtt 95381  T
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  95380 gttgagtccatgcatactcattaaagttgagggcttgatgc 95340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 4653 - 4787
Alignment:
Q  126 tgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtc 225  Q
    |||| ||||| ||| |||||||| |||||||| ||||||| |||||| ||||||| |||||| || |||  | |||||  |||||| |||  ||||||||    
T  4653 tgcttatgttagtcaaagttgtt-aagttgtaagatgttgttccaaagtattggattcatataagttgtggatgttgtccaagttgtaagttgttgagtc 4751  T
Q  226 catgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| |||||||||||||||||||||    
T  4752 catgcatactcattcaagttgagggcttgatgccct 4787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 261
Target Start/End: Original strand, 14699 - 14833
Alignment:
Q  126 tgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtc 225  Q
    |||| ||||| ||| |||||||| |||||||| ||||||| |||||| ||||||| |||||| |  |||| | ||||| ||||||| |||  |||||| |    
T  14699 tgcttatgttagtcaaagttgtt-aagttgtaagatgttgttccaaagtattggattcatataaattgtcgatgttgtctaagttgtaagttgttgagac 14797  T
Q  226 catgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| |||||||| ||||||||||||    
T  14798 catgcatactcattcaagttgagtgcttgatgccct 14833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 8417 - 8512
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    ||||||| |||| |||||||||||||||||| || |||| ||||||||||||||||||||||||| |||| | ||||| ||| |||||||||||||    
T  8417 ttgtgaatgatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgttgcaaattatttgatgttgttgccttgctg 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 60439 - 60313
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||  |||||  ||||||||  |||| || |||  ||||||| ||||||| |||  ||||||||||||||    
T  60439 tgttggtctaagttgta-aagttgtaagttgttattccaagatattggaggtatataagttgttgaagttgtctaagttgtaagttgttgagtccatgca 60341  T
Q  232 tactcatttaagttgagggcttgatgcc 259  Q
    ||||||| ||||||||||||||||||||    
T  60340 tactcatataagttgagggcttgatgcc 60313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 8605 - 8658
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaa 198  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||||||||    
T  8605 tgtttaagttgtaatatgttgatccaaattattggagtcataagagatgtctaa 8658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 11159 - 11048
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||| |||||| |||||||||||||| ||||||| | |||||  |||||| | || |||  |||||||||||||||||||||||| ||    
T  11159 aagttgtaagatgttgttccaaaatattggagtcatataagatgtcgatgttgtccaagttgtaggatgtttggtccatgcatactcatttaagttgggg 11060  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  11059 gcttgatgccct 11048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 22259 - 22148
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||| |||||| |||||||||||||| ||||||| | |||||  |||||| ||||  || || |||||||||||||||||||||| ||    
T  22259 aagttgtaagatgttgttccaaaatattggagtcatataagatgtcgatgttgtccaagttgtaagatatttaggccatgcatactcatttaagttgggg 22160  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  22159 gcttgatgccct 22148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 102061 - 102104
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  102061 gttgagtccatgcatactcatttacgttgagggcttgatgccct 102104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 11350 - 11221
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| |||||||  |||||||| | |||||||||||| |||||||||||||| ||||||| | | |||  | |||| |||  |||||||||||||    
T  11350 atgttggtcaaagttgtc-aagttgtaagttgttgatccaaagtattggagtcatataagatgtcgatgatgtccatgttgtaagttgttgagtccatgc 11252  T
Q  231 atactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| | |||||||||||||||||||    
T  11251 atactcattcatgttgagggcttgatgccct 11221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 3551 - 3510
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| ||||| || ||||||||||||||||||    
T  3551 tgagtccatgcatagtcattaaatttgagggcttgatgccct 3510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 7585 - 7642
Alignment:
Q  146 gtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7585 gtttaagttgtaagatgttgatccaaattattggagtcatatgagatgtctaagttgt 7642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 11696 - 11807
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||||| |||||| ||||||| |||||| || |||| | |||||  |||||| |||  | ||||||||| ||||||||||||||||||||    
T  11696 aagttgtaagatgttgttccaaagtattggaatcatataagttgtcgatgttgtccaagttgtaagttgctgagtccatacatactcatttaagttgagg 11795  T
Q  250 gcttgatgccct 261  Q
    ||||||||||||    
T  11796 gcttgatgccct 11807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 24785 - 24872
Alignment:
Q  26 gatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    |||| |||||||||||||||||| || |||| |||||||||||||||||||||||||||| | | ||||| ||| |||||||||||||    
T  24785 gatgatgatatgaagttgtaatgattgtatttgatgattattgttgatgttgacttgctgtaaattatttgatgttgttgccttgctg 24872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 63055 - 63173
Alignment:
Q  141 aagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt 240  Q
    ||||||| |||||| |||| ||||| |||||| |||||||||| ||   | |||  | ||||| ||||||| |||  |||||||||||||||||||||||    
T  63055 aagttgtctaagttatatgttgttgttccaaagtattggagtcgtagatgttgttgacgttgtctaagttgtaagttgttgagtccatgcatactcattt 63154  T
Q  241 aagttgagggcttgatgcc 259  Q
    |||||||||||||||||||    
T  63155 aagttgagggcttgatgcc 63173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 204
Target Start/End: Complemental strand, 353 - 282
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  353 atgttggtc-aagttgtt-aagttgtaagatgttgatccaaattattggagtcatatgagatatctaagttgtt 282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 5579 - 5467
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| ||||||| |||||| |||| ||||||||| || |||  | |||||  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  5579 aagttgtaagatgttgttccaaagtatttgagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatactcatttgaagttgag 5480  T
Q  249 ggcttgatgccct 261  Q
    |||||||||||||    
T  5479 ggcttgatgccct 5467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 7876 - 7917
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  7876 tgagtccatgcatactcattaaagttgagggcttgatgccct 7917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 3210 - 3167
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  3210 gttgagtccaagcatactcatttaagttgacggcttgatgccct 3167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 48; Significance: 2e-18; HSPs: 5)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 13375 - 13316
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  13375 tgtttaatttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 13316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 25076 - 25017
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    ||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  25076 tgtttaatttgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 25017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 13561 - 13467
Alignment:
Q  19 tgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    |||||| |||| ||||||||||||||||||  | |||| ||||||||||||||||||||||||| |||| | ||| | ||| |||||||||||||    
T  13561 tgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgattattgttgatgttgacttgttgcaaattatatgatgttgttgccttgctg 13467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 25149 - 25065
Alignment:
Q  119 attaggatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    |||| ||||||||||||||| ||||| |||| |||| || ||||| |  |||| |||||||||||||||||||||| ||| ||||    
T  25149 attaagatgctaatgttggtttaagtcgtttgagttataagatgtcggcccaatttattggagtcatatgagatgtttaatttgt 25065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 13443 - 13364
Alignment:
Q  124 gatgctaatgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgt 203  Q
    ||||||||||||||| ||||| |||| |||| || ||||| |  |||| |||||||||||||||||||||| ||| ||||    
T  13443 gatgctaatgttggtttaagtcgtttgagttataagatgtcggcccaatttattggagtcatatgagatgtttaatttgt 13364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 261
Target Start/End: Complemental strand, 24304 - 24217
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| || |||  | ||||| ||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||    
T  24304 tattggagtcatataagttgttgatgttgtctaagttgtaagttgctgagtccatgcatactcatttaagttgagggcttgatgccct 24217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 47432 - 47562
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| |||||||  |||||||| | ||||| | |||  |||||||||||| |||| |||  ||||||| ||||||| |||  |||||||||||||    
T  47432 atgttggtcaaagttgtc-aagttgtaagttgttgtttcaagatattggagtcatgtgagttgttgaagttgtctaagttgtaagttgttgagtccatgc 47530  T
Q  231 atactcattt-aagttgagggcttgatgccct 261  Q
    |||||||||| |||||||||| ||||||||||    
T  47531 atactcatttgaagttgagggattgatgccct 47562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 28460 - 28331
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||   |||||||| | ||| | |||||  |||||||||||||| || |||  |||||||  || | | |||  ||||||||||||||    
T  28460 tgttggtctaagttgca-aagttgtaagttgtcgttccaagatattggagtcatataagttgttgaagttgtccaaatagtaagttgttgagtccatgca 28362  T
Q  232 tactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||    
T  28361 tactcatttaaagttgagggcttgatgccct 28331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 39279 - 39169
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| ||||||| || ||| |||||||||||||| || |||  | |||||  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  39279 aagttgtaagatgttgttctaaagtattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatactcatttaaagttgag 39180  T
Q  249 ggcttgatgcc 259  Q
    |||||||||||    
T  39179 ggcttgatgcc 39169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 34948 - 34903
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  34948 gatgttgatccaaattattggagtcataagagatgtctaagttgtt 34903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 2688 - 2579
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| | ||||| |||||  ||||||||||||||||| |||  ||||||| ||||||| |||  | |||||||||||||| |||||| ||||||||    
T  2688 aagttgtaagttgttgttccaagatattggagtcatatgagttgttgaagttgtctaagttgtaagttgctgagtccatgcatattcatttgaagttgag 2589  T
Q  249 ggcttgatgc 258  Q
    ||||||||||    
T  2588 ggcttgatgc 2579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 2906 - 2866
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||| ||||||||| ||||    
T  2906 gagtccatgcatactcatttaagttgggggcttgataccct 2866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 55034 - 54925
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgag 248  Q
    |||||||| ||||||| |||||| |||||||||||||| || |||  | ||| |  |||||| |||  ||||||||||||||||||||||| ||||||||    
T  55034 aagttgtaagatgttgttccaaagtattggagtcatataagttgttgatgttatccaagttgtaagttgttgagtccatgcatactcatttaaagttgag 54935  T
Q  249 ggcttgatgc 258  Q
    ||||||||||    
T  54934 ggcttgatgc 54925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 53591 - 53635
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||    
T  53591 gttgagtccatgcatactcatttgaagttgagggtttgatgccct 53635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 807 - 934
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||| |||||  |||||||||||||| || |||  ||||||| ||||||| |||  | | ||||||||||    
T  807 tgttggtctaagttgta-aagttgtaagttgttgttccaagatattggagtcatataagttgttgaagttgtctaagttgtaagttgctaagtccatgca 905  T
Q  232 tactcat-ttaagttgagggcttgatgcc 259  Q
    ||||||| | |||||||||||||||||||    
T  906 tactcatctaaagttgagggcttgatgcc 934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 6111 - 6238
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    ||||||||||||||||  |||||||| | ||||| |||||  |||||||||||||| || |||  ||||||| ||||||| |||  | | ||||||||||    
T  6111 tgttggtctaagttgta-aagttgtaagttgttgttccaagatattggagtcatataagttgttgaagttgtctaagttgtaagttgctaagtccatgca 6209  T
Q  232 tactcat-ttaagttgagggcttgatgcc 259  Q
    ||||||| | |||||||||||||||||||    
T  6210 tactcatctaaagttgagggcttgatgcc 6238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 11578 - 11707
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||| |  |||||||| | ||||| | |||  |||||||||||||| |  |||  ||||||| ||||||| |||  | ||||||||||||    
T  11578 tgttggtctaagttata-aagttgtaagttgttgtttcaagatattggagtcatataatttgttgaagttgtctaagttgtaagttgctgagtccatgca 11676  T
Q  232 tactcat-ttaagttgagggcttgatgccct 261  Q
    ||||||| | |||||||||||||||||||||    
T  11677 tactcatctaaagttgagggcttgatgccct 11707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 18459 - 18546
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttg 105  Q
    ||||||| |||| ||||||||||||||||||  | |||| ||||||||||||||||||||||||| |||| | ||||| ||| |||||    
T  18459 ttgtgaatgatgatgatatgaagttgtaatgaatgtatttgatgattattgttgatgttgacttgttgcaaattatttgatgttgttg 18546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 7439 - 7480
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  7439 tgagtccttgcatactcattaaagttgagggcttgatgccct 7480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 19106 - 19149
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  19106 gttgagtccatgcatactcatttaagttgagggcttgatgccct 19149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 36133 - 36090
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36133 gttgagtccatgcatactcatttaagttgagggcttgatgccct 36090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 221 - 259
Target Start/End: Original strand, 10597 - 10635
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  10597 gagtccatgcatactcatttaagttgggggcttgatgcc 10635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 74656 - 74597
Alignment:
Q  145 tgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtt 204  Q
    ||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  74656 tgtttaattcgtaagatgttgatccaaattattggagtcataagagatgtctaagttgtt 74597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 261
Target Start/End: Original strand, 7540 - 7651
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| ||||| | |||||| ||||||| |||||| || | || | |||||  |||||| |||  |||||||||||||||||||||| |||||||||    
T  7540 aagttgtaagatgtagttccaaagtattggaatcatataagttttcgatgttgtccaagttgtaagttgttgagtccatgcatactcattcaagttgagg 7639  T
Q  250 gcttgatgccct 261  Q
    ||||||| ||||    
T  7640 gcttgataccct 7651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 600 - 557
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  600 gttgagtccatgcatactcatttaagttgagggcttgatgccct 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 261
Target Start/End: Original strand, 127329 - 127416
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| || |||  ||||||| ||||||| |||  | ||||||||||||||||||||||||| || |||||||| ||||    
T  127329 tattggagtcatataagttgttcaagttgtctaagttgtaagttgctgagtccatgcatactcatttaagtagatggcttgattccct 127416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 1206 - 1078
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatg-tctaagttgtttaagttgcaagacgttgagtccatg 229  Q
    ||||||||| |||||||  |||||||| | ||||| |||||  ||||||||||||||||| || |  ||||||| ||||||| |||  ||||| ||||||    
T  1206 atgttggtcaaagttgtc-aagttgtaagttgttgttccaagatattggagtcatatgagttgttggaagttgtctaagttgtaagttgttgattccatg 1108  T
Q  230 catactcattt-aagttgagggcttgatgc 258  Q
    |||| |||||| ||||||||||||||||||    
T  1107 catattcatttgaagttgagggcttgatgc 1078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 261
Target Start/End: Complemental strand, 1050 - 950
Alignment:
Q  161 tgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccc 260  Q
    ||||| |||||| |||||||||||||| || |||  | ||||| ||||||| |||  | |||||||||||||||||||| |||||||||  |||||||||    
T  1050 tgttgttccaaagtattggagtcatataagttgttgatgttgtctaagttgtaagttgctgagtccatgcatactcattcaagttgaggttttgatgccc 951  T
Q  261 t 261  Q
    |    
T  950 t 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 18335 - 18375
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18335 gttgagtccatgcatactcatttaagttgagggcttgatgc 18375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 7398 - 7342
Alignment:
Q  205 taagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  7398 taagttgtaagatgttgagtccatgcatactcattcaagttgagggtttgatgccct 7342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 14517 - 14461
Alignment:
Q  205 taagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||    
T  14517 taagttgtaagatgttgagtccatgcatactcattcaagttgagggtttgatgccct 14461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 19766 - 19809
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  19766 gttgagtccatgcatactcatttacgttgagggcttgatgccct 19809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 261
Target Start/End: Complemental strand, 78184 - 78092
Alignment:
Q  169 caaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||| |||||||||||||| || |||  | |||||  |||||| |||  ||||||||||||||| |||||||||||||||||||| |||||||    
T  78184 caaagtattggagtcatataagttgttgatgttgtccaagttgtaagttgttgagtccatgcatcctcatttaagttgagggcttaatgccct 78092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 22290 - 22189
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||||| |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| |||||||||||    
T  22290 gatgttgttccaaattattggagttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggcttgatgc 22192  T
Q  259 cct 261  Q
    |||    
T  22191 cct 22189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 585 - 514
Alignment:
Q  18 ttgtgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcata 89  Q
    |||||||||| ||||||||||| || |||| |||||||  |||||||||| |||||| ||||||||||||||    
T  585 ttgtgaaagacgttgatatgaaattataattgttatatatgatgattattattgatggtgacttgctgcata 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 10924 - 10881
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  10924 gttgagtccatgcatactcatttacgttgagggcttgatgccct 10881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 17456 - 17413
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  17456 gttgagtccatgcatactcatttaagttgggggcttgatgccct 17413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 4)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 55787 - 55893
Alignment:
Q  154 tgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggctt 253  Q
    |||| ||||||| |||||||||||||||| |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| ||||||    
T  55787 tgtaagatgttgttccaaattattggagttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggctt 55885  T
Q  254 gatgccct 261  Q
    ||||||||    
T  55886 gatgccct 55893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 14171 - 14127
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  14171 gttgagtccatgcatactcatttgaagttgagggcttgatgccct 14127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 33515 - 33466
Alignment:
Q  213 aagacgttgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||||    
T  33515 aagatgttgagtccattgcatactcatttaagttgagggattgatgccct 33466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 257
Target Start/End: Complemental strand, 3002 - 2962
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatg 257  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  3002 gttgagtccatgcatactcatttgaagttgagggcttgatg 2962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 8114 - 8071
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  8114 gttgagtctatgcatactcatttaagttgagggcttgatgccct 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 659 - 616
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  659 gttgagtccatgcatactcatttacgttgaaggcttgatgccct 616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 66115 - 66076
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  66115 tgagtccatgcatactcatttaagttgagggcttgatgcc 66076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 113611 - 113654
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  113611 gttgagtccatgcatactcatttaagttgggggcttgatgccct 113654  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 125720 - 125677
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  125720 gttgagtccatgcatactcatttaagttgggggcttgatgccct 125677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 38321 - 38363
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  38321 ttgagtccatgcatactcattaaagttgggggcttgatgccct 38363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 13713 - 13755
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  13713 ttgagtccatgcatactcatttaagttgggggcttgatgccct 13755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 261
Target Start/End: Original strand, 13007 - 13116
Alignment:
Q  151 agttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgaggg 250  Q
    ||||||| ||||||| |||||| |||||||||| ||| || |||  | |||||  |||||| |||  |||||||||||||||||||| || ||||||| |    
T  13007 agttgtaagatgttgttccaaagtattggagtcgtataagttgttgacgttgtccaagttgtaagttgttgagtccatgcatactca-ttgagttgagag 13105  T
Q  251 cttgatgccct 261  Q
    |||||||||||    
T  13106 cttgatgccct 13116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 261
Target Start/End: Original strand, 14229 - 14330
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||||| |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| |||||||||||    
T  14229 gatgttgttccaaattattggagttatataagaggtcgatgtt-tctaagatgtaagttgttgagtccatgcatactcattcatgttgggggcttgatgc 14327  T
Q  259 cct 261  Q
    |||    
T  14328 cct 14330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 3834 - 3793
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  3834 tgagtccatgcatactcattaaagttgagggcttgatgccct 3793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 20978 - 21019
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  20978 tgagtccatgcatactcattaaagttgagggcttgatgccct 21019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 10811 - 10896
Alignment:
Q  174 tattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    |||| |||||||||| | |||  ||||||| ||| ||| |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  10811 tattagagtcatatgtgttgttgaagttgtctaacttgtaagttgttgagtccatgcatactcatttgaagttgagggcttgatgc 10896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 221376 - 221417
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  221376 tgagtccatgcatgctcatttaagttgagggcttgatgccct 221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 602 - 558
Alignment:
Q  218 gttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  602 gttgagtccatgcatactcatttgaagttgagggcttgatgccct 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 888 - 848
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  888 gagtccatgcatactcatttaagttgggggcttgatgccct 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 20831 - 20704
Alignment:
Q  131 atgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgc 230  Q
    ||||||||| |||||||  |||||||| ||||||| |||||| |||||||||||||| |  |||  | |||||  |||||| |||  ||||||||| |||    
T  20831 atgttggtcaaagttgtc-aagttgtaagatgttgttccaaagtattggagtcatataaattgttgatgttgtccaagttgtaagttgttgagtccgtgc 20733  T
Q  231 atactcattt-aagttgagggcttgatgc 258  Q
    |||||||||| |||||||||  |||||||    
T  20732 atactcatttgaagttgaggatttgatgc 20704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 7779 - 7867
Alignment:
Q  26 gatgttgatatgaagtt-gtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctg 113  Q
    |||| |||||||||||| |||||| || |||| ||||||||||||||| ||||||||||||   | ||||| ||| |||||||||||||    
T  7779 gatgatgatatgaagtttgtaatgattgtatttgatgattattgttgacgttgacttgctgtgaattatttgatgttgttgccttgctg 7867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 142531 - 142491
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  142531 gagtccatgcatactcatttaagttgggggcttgatgccct 142491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 25771 - 25811
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  25771 gttgagtccatgcatactcatttacgttgagggcttgatgc 25811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 1541 - 1584
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||||||||||| ||||| |||||||    
T  1541 gttgagtccatgcatactcatttaagttgatggcttcatgccct 1584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 3774 - 3731
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  3774 gttgagtccatgcatactcattaaagttgagggtttgatgccct 3731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 1761 - 1720
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| ||||||||| |||||||||||    
T  1761 tgagtccatgcatactcattaaagttgaggacttgatgccct 1720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 391 - 284
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||  |||||||||||||| || |||  ||||||||||||||| ||   | |||| |||||||||||||| || |||||||    
T  391 aagttgtaagttgttgttccaagatattggagtcatataagttgttgaagttgtttaagttgtaatttgatgagcccatgcatactcatatatgttgagg 292  T
Q  250 gcttgatg 257  Q
    | ||||||    
T  291 gtttgatg 284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 8646 - 8539
Alignment:
Q  150 aagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagg 249  Q
    |||||||| | ||||| |||||  |||||||||||||| || |||  ||||||||||||||| ||   | |||| |||||||||||||| || |||||||    
T  8646 aagttgtaagttgttgttccaagatattggagtcatataagttgttgaagttgtttaagttgtaatttgatgagcccatgcatactcatatatgttgagg 8547  T
Q  250 gcttgatg 257  Q
    | ||||||    
T  8546 gtttgatg 8539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 64926 - 64993
Alignment:
Q  192 tgtctaagttgtttaagttgcaagacgttgagtccatgcatactcat-ttaagttgagggcttgatgc 258  Q
    ||||||||||||||||||||   |  |||||||| |||||||||||| ||||||||||||||||||||    
T  64926 tgtctaagttgtttaagttgttggttgttgagtcaatgcatactcatattaagttgagggcttgatgc 64993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 1652 - 1610
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  1652 ttgagtccatgcatactcattaaagttgggggcttgatgccct 1610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 261
Target Start/End: Original strand, 2522 - 2623
Alignment:
Q  159 gatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    ||||||| |||||||||||||| | |||| ||| ||| | ||| | |||| || |||  |||||||||||||||||||||| | |||| |||||||||||    
T  2522 gatgttgttccaaattattggatttatataagaggtcgatgtt-tgtaagatgtaagttgttgagtccatgcatactcattcatgttgggggcttgatgc 2620  T
Q  259 cct 261  Q
    |||    
T  2621 cct 2623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 119
Target Start/End: Complemental strand, 1984 - 1887
Alignment:
Q  21 tgaaagatgttgatatgaagttgtaatggttatattggatgattattgttgatgttgacttgctgcataatatttaatggtgttgccttgctgtcgtga 119  Q
    |||||||||||||||||| ||| || | ||| |||  |||||||||| ||| |||||||||||||| || ||||  ||| |||||||||||||| ||||    
T  1984 tgaaagatgttgatatga-gttatacttgttgtatatgatgattattattgttgttgacttgctgcttattattagatgatgttgccttgctgttgtga 1887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 1860 - 1788
Alignment:
Q  133 gttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcat-atgagatgtctaagttgtt 204  Q
    ||||||| |||| ||| |||| ||| ||||||||||||| ||||||||||||| | ||| |||||||||||||    
T  1860 gttggtcaaagtcgttcaagtcgtaagatgttgatccaagttattggagtcataaagagttgtctaagttgtt 1788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 1522 - 1460
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||||| ||||||| |||  | ||||||||||||||||||||| ||||||||||||||||||    
T  1522 aagttgtctaagttgtaagttgctgagtccatgcatactcatttaaagttgagggcttgatgc 1460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 4665 - 4627
Alignment:
Q  221 gagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  4665 gagtccatgcatactcatttcaagttgagggcttgatgc 4627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 17525 - 17463
Alignment:
Q  199 gttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||| ||||||| |||  ||||||||||||||||||| | || |||||||||||||||||||    
T  17525 gttgtctaagttgtaagttgttgagtccatgcatactcctatatgttgagggcttgatgccct 17463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 13063 - 12998
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||| ||||||| | |  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  13063 aagttgtctaagttgtacgttgttgagtccatgcatactcatttgaagttgagagcttgatgccct 12998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 15881 - 15816
Alignment:
Q  197 aagttgtttaagttgcaagacgttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    ||||||||||||||  | |  ||||||| ||||||||||||||| |||||||||||||||||||||    
T  15881 aagttgtttaagttctacgttgttgagttcatgcatactcatttgaagttgagggcttgatgccct 15816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 41193 - 41235
Alignment:
Q  220 tgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  41193 tgagtccattgcatactcatttaagttgagggcttgatgccct 41235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 17086 - 17128
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  17086 ttgagtccatgcatactcattaaagttgggggcttgatgccct 17128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 26198 - 26240
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  26198 ttgagtccatgcatactcattaaagttgggggcttgatgccct 26240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 357 - 324
Alignment:
Q  228 tgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||||||||||||||||    
T  357 tgcatactcatttaagttgagggcttgatgccct 324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 3449 - 3321
Alignment:
Q  132 tgttggtctaagttgtttaagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgca 231  Q
    |||||||||||||||   ||||||||   ||||| |||||  ||||||| |||||| || ||   ||||||| ||||||| |||  | |||||| |||||    
T  3449 tgttggtctaagttgca-aagttgtaacttgttgttccaagatattggaatcatataagttgctgaagttgtctaagttgtaagttgctgagtctatgca 3351  T
Q  232 tactcatttaagttgagggcttgatgccct 261  Q
    ||||||| || |||||||||||||||||||    
T  3350 tactcatatatgttgagggcttgatgccct 3321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 2889 - 2930
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||| ||||||||| |||||||||||||||||||    
T  2889 gttgagtccatgtatactcattaaagttgagggcttgatgcc 2930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 18175 - 18134
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  18175 tgagtccatgcatactcattaaacttgagggcttgatgccct 18134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 25698 - 25657
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| ||||||||||||| |||||||    
T  25698 tgagtccatgcatactcattaaagttgagggcttcatgccct 25657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 261
Target Start/End: Complemental strand, 500 - 432
Alignment:
Q  193 gtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||   |  |||||||||||||||||||||| |||||  ||| ||||||||||    
T  500 gtctaagttgtttaagttgttggttgttgagtccatgcatactcattaaagttaggggtttgatgccct 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 605 - 645
Alignment:
Q  220 tgagtccat-gcatactcatttaagttgagggcttgatgcc 259  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  605 tgagtccattgcatactcatttaagttgagggcttgatgcc 645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 136503 - 136615
Alignment:
Q  149 taagttgtatgatgttgatccaaattattggagtcatatgagatgtctaagttgtttaagttgcaagacgttgagtccatgcatactcatttaagttgag 248  Q
    ||||||||| | ||||| |||||  | |||||||| ||| || |||  ||||||| |||||||   | ||||||||||||||||| ||||| ||||||||    
T  136503 taagttgtaagttgttgttccaagatgttggagtcgtataagctgttgaagttgtctaagttgttggtcgttgagtccatgcatagtcattaaagttgag 136602  T
Q  249 ggcttgatgccct 261  Q
    ||  |||||||||    
T  136603 ggtgtgatgccct 136615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 926 - 969
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  926 gttgagtccatgcatactcattcatgttgggggcttgatgccct 969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 386 - 429
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||    
T  386 gttgagtccattcatactcatttacgttgagggcttggtgccct 429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 7445 - 7406
Alignment:
Q  220 tgagtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7445 tgagtccatgcatactcatttaaagttgagggcttgatgc 7406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 7505 - 7462
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  7505 gttgagtccatgcatactcattcatgttgggggcttgatgccct 7462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 10116 - 10073
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||||    
T  10116 gttgagtccatacatactcatttaagttgggggtttgatgccct 10073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 7609 - 7566
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  7609 gttgagtccatgcatactcattcatgttgggggcttgatgccct 7566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 18752 - 18791
Alignment:
Q  221 gagtccatgcatactcatttaagttgagggcttgatgccc 260  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  18752 gagtccatgcatagtcattgaagttgagggcttgatgccc 18791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 117132 - 117089
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  117132 gttgagtccatgcatactcattcatgttgggggcttgatgccct 117089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 206692 - 206735
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  206692 gttgagtccatgcatactcattcatgttgggggcttgatgccct 206735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 96958 - 96915
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  96958 gttgagtccatgcatactcattcatgttgggggcttgatgccct 96915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 106236 - 106193
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| | |||| ||||||||||||||    
T  106236 gttgagtccatgcatactcattcatgttgggggcttgatgccct 106193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 397590 - 397547
Alignment:
Q  219 ttgagtccatgcatactcattt-aagttgagggcttgatgccct 261  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  397590 ttgagtccatgcatactcatttgaagttgagggtttgatgccct 397547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 140 - 178
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  140 tgagtccatgcatactcattaaagttgagggtttgatgc 178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 16023 - 15985
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  16023 tgagtccatgcataatcattaaagttgagggcttgatgc 15985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 19816 - 19858
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||    
T  19816 ttgagtcaatgcatactcattaaagttgggggcttgatgccct 19858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 4864 - 4906
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| | |||| ||||||||||||||    
T  4864 ttgagtccatgcatactcattcatgttgggggcttgatgccct 4906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 57769 - 57727
Alignment:
Q  219 ttgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||||||||| |||||| |||||| |||||||    
T  57769 ttgagtccatgcatactcattaaagttgggggcttaatgccct 57727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 258
Target Start/End: Complemental strand, 56144 - 56106
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgc 258  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  56144 tgagtccatgcataatcattaaagttgagggcttgatgc 56106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 345 - 386
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  345 tgagtccatgcatactcattaaaattgagggcttggtgccct 386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 10960 - 10911
Alignment:
Q  213 aagacgttgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    |||| ||||||||||| |||||||||||||||||||||| || |||||||    
T  10960 aagatgttgagtccattgcatactcatttaagttgagggtttaatgccct 10911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 378 - 419
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| ||||| |||||| ||||||||||||||    
T  378 tgagtccatgcataatcattaaagttgggggcttgatgccct 419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 1847 - 1807
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  1847 gttgagtccatgcatactca-ttaagttgagggattgatgcc 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 19603 - 19640
Alignment:
Q  222 agtccatgcatactcattt-aagttgagggcttgatgc 258  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  19603 agtccatgcatactcatttgaagttgagggcttgatgc 19640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 34379 - 34338
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| ||||| ||||||| |||||||||||||    
T  34379 tgagtccatgcatagtcattaaagttgaaggcttgatgccct 34338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 1934 - 1893
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||| ||||| |||||| ||||||||||||||    
T  1934 tgagtccatgcataatcattaaagttgggggcttgatgccct 1893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 864 - 913
Alignment:
Q  213 aagacgttgagtccat-gcatactcatttaagttgagggcttgatgccct 261  Q
    |||| ||||||||||| |||||||||||||||||||||| || |||||||    
T  864 aagatgttgagtccattgcatactcatttaagttgagggtttaatgccct 913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 17365 - 17332
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggctt 253  Q
    |||||||||||||||||||| |||||||||||||    
T  17365 tgagtccatgcatactcattaaagttgagggctt 17332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 61840 - 61799
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    |||||||||||||||||| | |||||| ||||||||||||||    
T  61840 tgagtccatgcatactcactaaagttgggggcttgatgccct 61799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 49124 - 49083
Alignment:
Q  218 gttgagtccatgcatactcatttaagttgagggcttgatgcc 259  Q
    |||||||||||||||| ||||| |||||| ||||||||||||    
T  49124 gttgagtccatgcataatcattaaagttgggggcttgatgcc 49083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 3981 - 4022
Alignment:
Q  220 tgagtccatgcatactcatttaagttgagggcttgatgccct 261  Q
    ||||||||||||||| |||| ||| |||||||||||||||||    
T  3981 tgagtccatgcatacccattaaagatgagggcttgatgccct 4022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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