View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9050_low_22 (Length: 209)

Name: NF9050_low_22
Description: NF9050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9050_low_22
NF9050_low_22
[»] chr6 (46 HSPs)
chr6 (14-190)||(27283707-27283883)
chr6 (20-190)||(27623058-27623228)
chr6 (12-185)||(26927427-26927608)
chr6 (12-185)||(27209574-27209755)
chr6 (12-185)||(27239473-27239654)
chr6 (12-185)||(16756496-16756677)
chr6 (12-186)||(22928198-22928380)
chr6 (12-166)||(24870402-24870564)
chr6 (13-185)||(24299105-24299285)
chr6 (12-158)||(15405874-15406028)
chr6 (12-158)||(15417661-15417815)
chr6 (20-185)||(33369781-33369954)
chr6 (20-187)||(27064174-27064349)
chr6 (20-187)||(30551331-30551506)
chr6 (20-185)||(29508096-29508269)
chr6 (20-185)||(29556231-29556404)
chr6 (12-180)||(27025822-27025998)
chr6 (12-180)||(27031701-27031877)
chr6 (20-187)||(4539110-4539285)
chr6 (12-185)||(13292288-13292470)
chr6 (20-185)||(14138752-14138925)
chr6 (20-160)||(27200897-27201045)
chr6 (20-160)||(27248188-27248336)
chr6 (20-187)||(13517545-13517720)
chr6 (20-187)||(34457837-34458012)
chr6 (20-190)||(28214138-28214316)
chr6 (20-180)||(4764442-4764610)
chr6 (20-187)||(29579707-29579882)
chr6 (20-192)||(26109752-26109933)
chr6 (20-185)||(26792491-26792664)
chr6 (20-185)||(27014399-27014572)
chr6 (20-187)||(27491811-27491987)
chr6 (20-187)||(27355434-27355609)
chr6 (19-127)||(20131253-20131369)
chr6 (19-127)||(22201501-22201617)
chr6 (20-187)||(4531967-4532142)
chr6 (20-187)||(26665988-26666163)
chr6 (20-187)||(26771959-26772134)
chr6 (20-166)||(28167188-28167342)
chr6 (73-187)||(4779584-4779698)
chr6 (20-160)||(8899028-8899176)
chr6 (20-187)||(16937357-16937532)
chr6 (73-187)||(16680832-16680946)
chr6 (19-62)||(20175368-20175411)
chr6 (19-62)||(22160580-22160623)
chr6 (20-61)||(16680966-16681007)
[»] chr7 (34 HSPs)
chr7 (12-190)||(26508968-26509154)
chr7 (12-166)||(16048027-16048189)
chr7 (12-186)||(16443264-16443446)
chr7 (12-185)||(5154758-5154939)
chr7 (20-187)||(26663179-26663354)
chr7 (20-187)||(26678371-26678546)
chr7 (12-186)||(16511708-16511890)
chr7 (12-185)||(2161247-2161427)
chr7 (20-187)||(31083890-31084066)
chr7 (20-187)||(16744787-16744962)
chr7 (12-166)||(10848299-10848461)
chr7 (12-185)||(5165059-5165240)
chr7 (12-185)||(11418062-11418243)
chr7 (20-187)||(26313130-26313306)
chr7 (11-185)||(10910208-10910390)
chr7 (20-185)||(2779919-2780092)
chr7 (20-187)||(31557671-31557847)
chr7 (20-187)||(4206069-4206244)
chr7 (20-187)||(26441938-26442113)
chr7 (73-187)||(45393913-45394027)
chr7 (20-187)||(26596349-26596525)
chr7 (73-185)||(3451926-3452038)
chr7 (20-185)||(22148563-22148736)
chr7 (20-185)||(22152790-22152963)
chr7 (20-185)||(22208705-22208878)
chr7 (20-160)||(31130616-31130765)
chr7 (20-187)||(4138512-4138687)
chr7 (73-187)||(11447582-11447696)
chr7 (73-187)||(26519501-26519615)
chr7 (20-187)||(24585802-24585978)
chr7 (20-187)||(26268353-26268527)
chr7 (20-166)||(39206431-39206585)
chr7 (20-166)||(45737995-45738149)
chr7 (20-152)||(5140604-5140744)
[»] chr2 (40 HSPs)
chr2 (12-186)||(21696553-21696735)
chr2 (14-186)||(27397031-27397211)
chr2 (12-180)||(34268287-34268463)
chr2 (20-187)||(13929983-13930158)
chr2 (12-185)||(23117471-23117652)
chr2 (20-187)||(3789138-3789313)
chr2 (20-187)||(19409856-19410031)
chr2 (12-166)||(19449776-19449939)
chr2 (20-187)||(37932072-37932247)
chr2 (20-187)||(16822710-16822885)
chr2 (20-187)||(16898595-16898770)
chr2 (20-187)||(21670545-21670720)
chr2 (12-185)||(20844590-20844771)
chr2 (20-187)||(254024-254199)
chr2 (20-187)||(11628557-11628732)
chr2 (20-187)||(16168173-16168348)
chr2 (20-187)||(27810398-27810573)
chr2 (20-187)||(32056447-32056622)
chr2 (20-175)||(34297856-34298019)
chr2 (20-187)||(39896764-39896939)
chr2 (12-185)||(28888929-28889110)
chr2 (20-187)||(9343359-9343534)
chr2 (12-166)||(27427837-27428000)
chr2 (20-187)||(37679270-37679445)
chr2 (20-187)||(37694535-37694710)
chr2 (20-187)||(37945237-37945412)
chr2 (20-187)||(39045254-39045430)
chr2 (20-187)||(12593509-12593684)
chr2 (20-166)||(37384371-37384525)
chr2 (12-185)||(31868173-31868354)
chr2 (20-166)||(31882987-31883141)
chr2 (13-185)||(12662165-12662346)
chr2 (20-187)||(22921516-22921691)
chr2 (20-187)||(34161536-34161711)
chr2 (20-185)||(12709996-12710169)
chr2 (73-187)||(34868329-34868443)
chr2 (20-166)||(27123216-27123370)
chr2 (20-187)||(27782918-27783093)
chr2 (20-160)||(40240245-40240393)
chr2 (20-61)||(3790473-3790514)
[»] chr5 (51 HSPs)
chr5 (12-178)||(22895118-22895292)
chr5 (20-187)||(15752142-15752317)
chr5 (12-186)||(23898578-23898761)
chr5 (20-187)||(30036128-30036303)
chr5 (12-185)||(23726921-23727102)
chr5 (12-180)||(22992417-22992593)
chr5 (20-187)||(6880995-6881170)
chr5 (73-187)||(31819766-31819880)
chr5 (20-187)||(33523086-33523261)
chr5 (12-185)||(24608929-24609110)
chr5 (12-185)||(24976528-24976709)
chr5 (13-180)||(23632659-23632834)
chr5 (13-180)||(25206998-25207173)
chr5 (13-180)||(25271154-25271329)
chr5 (20-187)||(32589559-32589734)
chr5 (20-187)||(37351948-37352123)
chr5 (20-187)||(40466833-40467008)
chr5 (20-187)||(28953079-28953254)
chr5 (20-185)||(9544012-9544185)
chr5 (20-187)||(9324165-9324341)
chr5 (12-180)||(11556043-11556219)
chr5 (20-187)||(26487075-26487251)
chr5 (20-187)||(12138864-12139039)
chr5 (20-187)||(33881808-33881983)
chr5 (20-187)||(18494052-18494227)
chr5 (15-185)||(30941314-30941492)
chr5 (22-160)||(37745635-37745781)
chr5 (20-185)||(2517749-2517922)
chr5 (20-180)||(18121717-18121886)
chr5 (12-185)||(33299220-33299401)
chr5 (12-185)||(33784166-33784347)
chr5 (20-187)||(43084956-43085124)
chr5 (12-152)||(13180093-13180241)
chr5 (20-187)||(3796235-3796410)
chr5 (20-187)||(30158722-30158897)
chr5 (73-187)||(37761676-37761790)
chr5 (20-185)||(15652045-15652218)
chr5 (20-185)||(31438141-31438314)
chr5 (20-187)||(11330336-11330511)
chr5 (20-187)||(30175170-30175345)
chr5 (20-187)||(34623201-34623376)
chr5 (20-166)||(8658777-8658931)
chr5 (20-185)||(24730653-24730826)
chr5 (20-166)||(41681408-41681564)
chr5 (20-187)||(5644502-5644677)
chr5 (20-187)||(28655947-28656122)
chr5 (20-187)||(13318110-13318285)
chr5 (20-187)||(13435953-13436128)
chr5 (20-185)||(37664788-37664961)
chr5 (20-187)||(18368814-18368989)
chr5 (20-61)||(13178783-13178824)
[»] chr4 (28 HSPs)
chr4 (12-186)||(15234526-15234708)
chr4 (12-186)||(1906975-1907157)
chr4 (12-186)||(24585747-24585929)
chr4 (20-187)||(54840097-54840272)
chr4 (12-166)||(15276002-15276164)
chr4 (12-166)||(15379614-15379776)
chr4 (12-166)||(14671717-14671879)
chr4 (20-187)||(31119894-31120069)
chr4 (13-185)||(17019737-17019917)
chr4 (20-187)||(20331819-20331994)
chr4 (20-187)||(21976410-21976585)
chr4 (20-187)||(27156710-27156885)
chr4 (20-185)||(6576544-6576718)
chr4 (20-185)||(14752900-14753073)
chr4 (20-181)||(5012593-5012763)
chr4 (20-166)||(39857342-39857496)
chr4 (20-185)||(36323721-36323894)
chr4 (20-185)||(36337930-36338103)
chr4 (20-187)||(40099017-40099192)
chr4 (20-166)||(5701256-5701410)
chr4 (20-160)||(18794027-18794175)
chr4 (73-187)||(33667246-33667360)
chr4 (20-186)||(34182341-34182515)
chr4 (20-187)||(14105250-14105425)
chr4 (20-185)||(24119349-24119523)
chr4 (73-187)||(30760470-30760584)
chr4 (20-61)||(24814685-24814726)
chr4 (20-61)||(24813781-24813822)
[»] chr3 (60 HSPs)
chr3 (16-186)||(19701055-19701233)
chr3 (12-185)||(4728265-4728446)
chr3 (12-185)||(5658773-5658954)
chr3 (12-185)||(6208534-6208715)
chr3 (20-187)||(28109388-28109564)
chr3 (20-187)||(24334835-24335010)
chr3 (12-186)||(15886157-15886339)
chr3 (12-185)||(18057907-18058088)
chr3 (12-185)||(22381020-22381201)
chr3 (12-185)||(29142194-29142375)
chr3 (12-180)||(18337268-18337444)
chr3 (13-186)||(15367903-15368085)
chr3 (12-186)||(16422845-16423027)
chr3 (20-187)||(18231851-18232026)
chr3 (12-185)||(4790071-4790252)
chr3 (20-185)||(11103809-11103982)
chr3 (12-180)||(16617907-16618084)
chr3 (22-187)||(17978378-17978551)
chr3 (12-185)||(35887399-35887580)
chr3 (12-180)||(8282900-8283076)
chr3 (14-158)||(15734558-15734710)
chr3 (12-166)||(22041087-22041250)
chr3 (12-186)||(4690313-4690495)
chr3 (20-185)||(31029691-31029864)
chr3 (23-187)||(5717714-5717886)
chr3 (23-187)||(5728624-5728796)
chr3 (23-187)||(5763572-5763744)
chr3 (20-187)||(5020370-5020545)
chr3 (20-187)||(6536168-6536343)
chr3 (20-187)||(10649730-10649904)
chr3 (20-187)||(29658392-29658567)
chr3 (20-185)||(4340124-4340297)
chr3 (20-185)||(5473628-5473801)
chr3 (20-185)||(18285804-18285977)
chr3 (20-185)||(18301105-18301278)
chr3 (20-185)||(32445791-32445964)
chr3 (20-187)||(5589781-5589956)
chr3 (20-187)||(22864289-22864464)
chr3 (20-187)||(22879348-22879523)
chr3 (20-185)||(4423557-4423730)
chr3 (20-185)||(4630420-4630593)
chr3 (20-187)||(17970305-17970481)
chr3 (20-187)||(47030114-47030290)
chr3 (20-187)||(28345830-28346005)
chr3 (20-187)||(32297290-32297465)
chr3 (20-187)||(5602738-5602913)
chr3 (20-187)||(20570281-20570456)
chr3 (20-187)||(16404217-16404392)
chr3 (73-187)||(51788681-51788795)
chr3 (84-185)||(7079867-7079968)
chr3 (20-166)||(20072693-20072847)
chr3 (20-166)||(48472590-48472744)
chr3 (20-160)||(31957881-31958029)
chr3 (20-187)||(18249377-18249552)
chr3 (20-187)||(10402811-10402986)
chr3 (20-160)||(21681406-21681554)
chr3 (20-187)||(28027930-28028105)
chr3 (73-187)||(8218284-8218398)
chr3 (20-61)||(7080022-7080063)
chr3 (20-61)||(16599406-16599447)
[»] chr8 (25 HSPs)
chr8 (12-185)||(2130623-2130804)
chr8 (12-185)||(15774250-15774431)
chr8 (20-187)||(29836023-29836198)
chr8 (12-166)||(22074267-22074429)
chr8 (12-180)||(22139595-22139771)
chr8 (12-166)||(18797404-18797566)
chr8 (12-185)||(33249039-33249220)
chr8 (12-180)||(14569836-14570012)
chr8 (12-186)||(16260613-16260795)
chr8 (12-186)||(19654681-19654863)
chr8 (12-186)||(19694791-19694973)
chr8 (12-180)||(21341525-21341702)
chr8 (20-187)||(28355299-28355474)
chr8 (20-166)||(18716177-18716331)
chr8 (20-187)||(31483218-31483393)
chr8 (20-187)||(33265420-33265595)
chr8 (20-190)||(12086075-12086253)
chr8 (12-158)||(19910522-19910676)
chr8 (12-185)||(27602268-27602449)
chr8 (20-149)||(31361267-31361404)
chr8 (20-187)||(19201730-19201906)
chr8 (73-187)||(44567680-44567794)
chr8 (73-187)||(19681156-19681270)
chr8 (20-187)||(9361304-9361478)
chr8 (20-61)||(15775288-15775329)
[»] chr1 (15 HSPs)
chr1 (12-180)||(16201407-16201583)
chr1 (12-180)||(20333793-20333969)
chr1 (12-185)||(14692293-14692474)
chr1 (12-185)||(14694975-14695156)
chr1 (12-185)||(14697659-14697840)
chr1 (12-175)||(14700340-14700511)
chr1 (12-186)||(21891126-21891308)
chr1 (14-186)||(20467484-20467664)
chr1 (20-187)||(51644921-51645096)
chr1 (20-187)||(10951791-10951966)
chr1 (20-185)||(10969344-10969517)
chr1 (20-187)||(3647846-3648021)
chr1 (20-185)||(41786718-41786891)
chr1 (20-187)||(28591780-28591955)
chr1 (20-166)||(28156425-28156579)
[»] scaffold0109 (1 HSPs)
scaffold0109 (15-186)||(27992-28169)
[»] scaffold0093 (1 HSPs)
scaffold0093 (12-189)||(467-652)
[»] scaffold0241 (1 HSPs)
scaffold0241 (12-166)||(25946-26108)
[»] scaffold0322 (2 HSPs)
scaffold0322 (12-166)||(12769-12931)
scaffold0322 (20-187)||(2354-2529)
[»] scaffold0240 (1 HSPs)
scaffold0240 (15-185)||(24353-24531)
[»] scaffold0792 (1 HSPs)
scaffold0792 (12-185)||(3992-4173)
[»] scaffold0547 (1 HSPs)
scaffold0547 (12-180)||(9037-9214)
[»] scaffold0143 (2 HSPs)
scaffold0143 (13-185)||(33971-34151)
scaffold0143 (20-187)||(10615-10791)
[»] scaffold0038 (1 HSPs)
scaffold0038 (20-190)||(14636-14814)
[»] scaffold0237 (1 HSPs)
scaffold0237 (20-166)||(8325-8479)
[»] scaffold0159 (2 HSPs)
scaffold0159 (20-187)||(2561-2736)
scaffold0159 (110-187)||(18505-18582)
[»] scaffold0099 (1 HSPs)
scaffold0099 (73-185)||(40067-40181)
[»] scaffold0418 (1 HSPs)
scaffold0418 (20-185)||(12715-12888)
[»] scaffold0336 (1 HSPs)
scaffold0336 (73-187)||(16273-16387)
[»] scaffold0089 (1 HSPs)
scaffold0089 (119-185)||(6741-6807)


Alignment Details
Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 27283707 - 27283883
Alignment:
Q  14 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaagtcctctttggagataacgccgttgggagacgtaccggaacc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27283707 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccggaacc 27283806  T
Q  114 atggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatg 190  Q
    ||||||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  27283807 atggctgagggtagatagctaatcaacttactggggatagaattctggaagacccgactggggataacgccgttatg 27283883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 27623058 - 27623228
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcatagaagtcctctttggagataacgccgttgggagacgtaccggaaccatggct 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  27623058 agacaagacattagagtattgggcacgtagtggctcgtgctacatcatagaaatcctctttggagataacgccgttgggagacgtaccagaaccatggct 27623157  T
Q  120 gagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatg 190  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27623158 gagggtagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatg 27623228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 26927608 - 26927427
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||||||||||||||||    
T  26927608 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgccgttgggagacg 26927509  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || |||||||| ||||||||  |||||||||||||||| |||||||||||||||| || |||| | |||||| |||| ||||    
T  26927508 tatcggaaccaaggctgaggatagatagctaatcaactcgctggggatagaatctcgggagactctactgggaataatgccg 26927427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 27209755 - 27209574
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||       || |||||||||||||||||| ||||||||||||    
T  27209755 gcagagatagacaagacattggagtattgggcacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacg 27209656  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  27209655 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 27209574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 27239473 - 27239654
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||  ||||       || |||||||||||||||||| ||||||||||||    
T  27239473 gcagagatagacaagacattggagtattgggcacgtagtggctcgtgctagattacatattccagtaaatcctctttggagataacgtcgttgggagacg 27239572  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  27239573 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 27239654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 16756677 - 16756496
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  16756677 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 16756578  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  16756577 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 16756496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 22928198 - 22928380
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||||||  |||||||||| |    
T  22928198 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacatcgttgggagatg 22928297  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||| ||||||| |||||    
T  22928298 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactagggataatgccgt 22928380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 24870564 - 24870402
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  24870564 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 24870465  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  24870464 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 24870402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 24299105 - 24299285
Alignment:
Q  13 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgt 104  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||    
T  24299105 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgt 24299204  T
Q  105 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    | ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24299205 atcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24299285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 15405874 - 15406028
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||| ||||||||||||    
T  15405874 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 15405973  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 158  Q
    || ||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15405974 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 15406028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 15417661 - 15417815
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||| ||||||||||||    
T  15417661 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 15417760  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 158  Q
    || ||| ||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15417761 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatct 15417815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 33369781 - 33369954
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  33369781 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 33369880  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  33369881 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 33369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 27064349 - 27064174
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| | |||    
T  27064349 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 27064250  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||||||||||||  |  ||  | ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  27064249 ccatggctgagggcaggcaagtatgcgacttgctggagatagaatcttggaagacccgactggggaaaacgccgtt 27064174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 30551331 - 30551506
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||| ||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  30551331 agacaagatatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 30551430  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  30551431 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 30551506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 29508269 - 29508096
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  29508269 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 29508170  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||   ||||||||||||||||||||| ||||||| | |||||| |||||||||    
T  29508169 ccatggctgagggcaggtaggtatgtaacttgctggggatagaatctcggaagactctactgggaataacgccg 29508096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 29556404 - 29556231
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||| |||| |||| |||||||||||||||||| |||||    
T  29556404 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctttttgaagatgacgccgttgggagacgtatcggaa 29556305  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||||||||||||||||||||  |  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  29556304 ccatggctgagggcagataggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 29556231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 27025998 - 27025822
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||| ||||||||||||    
T  27025998 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 27025899  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || ||| |||| |||||||||| | ||| ||  ||||||||||||||||||||||||| |||| | |||||| ||||    
T  27025898 tatcgggaccaaggctgagggccggtagttatgcaacttgctggggatagaatcttgggagactctactgggaataa 27025822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 27031877 - 27031701
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  27031877 gcagagacagacaagacactggagcattgggcacgtaatggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 27031778  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || ||||||||||||||||||||| ||| ||  ||||||||||||||||| |||| ||||||| | |||||| ||||    
T  27031777 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggataggatctcggaagactctactgggaataa 27031701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 4539110 - 4539285
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  4539110 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 4539209  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |  ||||   ||||||||||| ||||||    
T  4539210 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgccgtt 4539285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 13292288 - 13292470
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| ||||||| ||||    
T  13292288 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggggacg 13292387  T
Q  104 taccggaaccatggctgagggcagatag-ctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| |||| |||||||||| | ||| |||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  13292388 tatcgggaccaaggctgagggccggtagtctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 13292470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 14138752 - 14138925
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  14138752 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14138851  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | |||||| |||| ||||    
T  14138852 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 14138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 27201045 - 27200897
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  27201045 agacaagacatcagagtattgggcacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 27200946  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  27200945 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttg 27200897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 27248188 - 27248336
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  27248188 agacaagacatcagagtattgggcacgtagtggctcgagctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 27248287  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  27248288 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttg 27248336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 13517545 - 13517720
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    ||||||||| || ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| ||| |    
T  13517545 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 13517644  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||  |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  13517645 cctaggctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 13517720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 34457837 - 34458012
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  34457837 agacaagacattagagtattgggcacatagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 34457936  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| |||||| |||||||||||| ||||||||| || ||||||    
T  34457937 ccatagctgagggcaggtagatatgcaacttgctggagatagagtcttggaagacctgactggggaaaatgccgtt 34458012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 28214316 - 28214138
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  28214316 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28214217  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatg 190  Q
    |||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||| ||||||||||||    
T  28214216 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatg 28214138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 4764610 - 4764442
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||  ||||    
T  4764610 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 4764511  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   |||||||||||    
T  4764510 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggataa 4764442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 29579882 - 29579707
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||| ||||||| || | |        ||| |||||| ||||||| ||| |||||||||||||| |||||    
T  29579882 agacaagacattagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 29579783  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| |   ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  29579782 ccatggccgagggccggtaggtgtgcaacttgctggagatagaatcttggaagacctgactggggagaatgccgtt 29579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 26109752 - 26109933
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta--------catcatagaagtcctctttggagataacgccgtt-gggagacgtaccgga 110  Q
    |||| ||||||  |||||||||||||||||||||||||||||        | || | ||| |||||||||||||| ||| |||| |||||||||| ||||    
T  26109752 agacgagacatcagagtattgggcacgtagtggctcgtgctatgttacaccttcttggaaatcctctttggagatgacgtcgtttgggagacgtatcgga 26109851  T
Q  111 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatgat 192  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||| |  ||||   ||||||||||| |||||| ||||    
T  26109852 accatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgccgttgtgat 26109933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 26792664 - 26792491
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||  ||| ||||||||||||||  ||||    
T  26792664 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacgtattggaa 26792565  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  26792564 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggataatgccg 26792491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 27014572 - 27014399
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||  ||||    
T  27014572 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 27014473  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  | ||| |||||||||||||||| ||||||| | |||||| |||| ||||    
T  27014472 ccatggctgagggcaggtaggtatgcgactcgctggggatagaatctcggaagactctactgggaataatgccg 27014399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 27491987 - 27491811
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  |||||||||||||||||| |||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  27491987 agacaagacatcagagtattgggcacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 27491888  T
Q  112 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||| |||||||| ||||||||||||||||  |||||  || ||||| |||||||||    
T  27491887 ccatggctgagggcaggtaggtaaacaacttgcttggggatagaatcttgagagacctcaccggggaaaacgccgtt 27491811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 27355434 - 27355609
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||| ||||||| |||||| ||||     
T  27355434 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggag 27355533  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| |||||||||||| ||| ||  ||||||||||||||||||||||||  |||||  || ||||| |||||||||    
T  27355534 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacctcaccggggaaaacgccgtt 27355609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 20131369 - 20131253
Alignment:
Q  19 cagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccgga 110  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||| |        ||| ||||||||||||||| || |||||||||||||| || |    
T  20131369 cagacaagacatcggagtgttgggcacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaa 20131270  T
Q  111 accatggctgagggcag 127  Q
    |||||||||||||||||    
T  20131269 accatggctgagggcag 20131253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 22201501 - 22201617
Alignment:
Q  19 cagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccgga 110  Q
    |||||||||||| ||||| |||||||||||||||||||||||| |||| |        ||| ||||||||||||||| || |||||||||||||| || |    
T  22201501 cagacaagacatcggagtgttgggcacgtagtggctcgtgctatatcacacattcctggaaatcctctttggagatatcgtcgttgggagacgtatcgaa 22201600  T
Q  111 accatggctgagggcag 127  Q
    |||||||||||||||||    
T  22201601 accatggctgagggcag 22201617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 4532142 - 4531967
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  |||||||||||||||||||||||| |||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  4532142 agacaagacatcagagtattgggcacgtagtggctcgagctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 4532043  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||  ||||   ||||||||||| ||||||    
T  4532042 cctaggctgagggctggtagctatgcaacttgctggggatagaatcttgagagactttactggggataatgccgtt 4531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 26665988 - 26666163
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  26665988 agacaagacattagagtattgggcacgtagtggctcgtgctatatgacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 26666087  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||  |||||||||  |  || ||  ||||||||||| ||||||||||||||||||   |||||||| |||||||||    
T  26666088 cctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 26666163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 26771959 - 26772134
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  26771959 agacaagacattagagtattgggcacgtagtggctcgtgctatatgacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 26772058  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||  |||||||||  |  || ||  ||||||||||| ||||||||||||||||||   |||||||| |||||||||    
T  26772059 cctaggctgagggtgggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 26772134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 28167342 - 28167188
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  28167342 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 28167243  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||  |||||||||| | ||||||  |||||||||||||||||| |||||| ||||    
T  28167242 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagac 28167188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 4779698 - 4779584
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||  ||| |||  ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||    
T  4779698 tcctctttggagatgacgtcgttgggagacgtttcgggacctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 4779599  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  4779598 ggggaaaacgccgtt 4779584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 8899028 - 8899176
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||| |||||||||||||| |||||    
T  8899028 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 8899127  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||    
T  8899128 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttg 8899176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 16937357 - 16937532
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  | |||| ||||||| ||| |||||||||||||| |||||    
T  16937357 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagattctctatggagatgacgtcgttgggagacgtatcggaa 16937456  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||    |||||||||||||||| |||||  |||| | |||||||| |||||||||    
T  16937457 ccatggccgagggccggtaggtatgtgacttgctggggatagagtcttgagagactccactggggaaaacgccgtt 16937532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 16680946 - 16680832
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | ||     
T  16680946 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccacc 16680847  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  16680846 ggggaaaacgccgtt 16680832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 20175411 - 20175368
Alignment:
Q  19 cagacaagacattggagtattgggcacgtagtggctcgtgctac 62  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||    
T  20175411 cagacgagacatcggagtattgagcacgtagtggctcgtgctac 20175368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 22160580 - 22160623
Alignment:
Q  19 cagacaagacattggagtattgggcacgtagtggctcgtgctac 62  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||    
T  22160580 cagacgagacatcggagtattgagcacgtagtggctcgtgctac 22160623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 16681007 - 16680966
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta 61  Q
    |||||||||||  ||||||||||||| |||||||||||||||    
T  16681007 agacaagacatcagagtattgggcacatagtggctcgtgcta 16680966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 1e-67; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 12 - 190
Target Start/End: Original strand, 26508968 - 26509154
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |        ||| |||||||||||||||||| ||||||||||||    
T  26508968 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctggaaatcctctttggagataacgtcgttgggagacg 26509067  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatg 190  Q
    || ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26509068 tatcggaaccatggctgagggcaggtagctaatcaacttgctgggggtagaatcttggaagacccgactggggataacgccgttatg 26509154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 16048189 - 16048027
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||| | ||||||||||||    
T  16048189 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataaagtcgttgggagacg 16048090  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  16048089 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 16048027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 16443264 - 16443446
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  16443264 gcagagacagacaagacattgaagtattgggcatgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 16443363  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || |||| |||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |  |||||||||| |||||    
T  16443364 tatcggagccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgt 16443446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 5154939 - 5154758
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  5154939 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 5154840  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  5154839 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 5154758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 26663179 - 26663354
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  26663179 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26663278  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  26663279 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 26663354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 26678371 - 26678546
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  26678371 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26678470  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  26678471 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 26678546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 16511708 - 16511890
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| || ||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  16511708 gcagagacagacaagacactggagtattgggcacgtaatgactcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 16511807  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| |||||    
T  16511808 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccgt 16511890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 2161427 - 2161247
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||  ||| ||||||||||||    
T  2161427 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagacgacgtcgttgggagacg 2161328  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  2161327 tgtcggaaccatggctgagggcag-tagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 2161247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 31083890 - 31084066
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  31083890 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31083989  T
Q  112 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||  |||| | || ||||| |||||||||    
T  31083990 ccatggctgagggcaggtagctaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgtt 31084066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 16744787 - 16744962
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  16744787 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgacggaa 16744886  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  16744887 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 16744962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 10848461 - 10848299
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |        ||| |||||||||||||||||| | ||||||||||    
T  10848461 gcagagacagacaagacattggagtattgggcacgtagtggctcgcgctatatcacacattcttggaaatcctctttggagataacgtcattgggagacg 10848362  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||| | | ||||  | |||||||||||| ||||||| |||||||    
T  10848361 tatcggaaccatggctgagggcgggttgctacgcgacttgctggggacagaatctcggaagac 10848299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 5165240 - 5165059
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| ||||||||||||    
T  5165240 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 5165141  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| |||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | ||| ||||||| ||||    
T  5165140 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactagggataatgccg 5165059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 11418062 - 11418243
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| || |        | ||| |||||||||||||| ||| ||||||||||||    
T  11418062 gcagagacagacaagacattagagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 11418161  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| |||  |||||||||| | ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  11418162 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 11418243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 26313130 - 26313306
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  26313130 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26313229  T
Q  112 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| |||||||||    
T  26313230 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgtt 26313306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 11 - 185
Target Start/End: Original strand, 10910208 - 10910390
Alignment:
Q  11 agcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagac 102  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| |||  ||||||||||    
T  10910208 agcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgttgttgggagac 10910307  T
Q  103 gtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||| ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| | |||||| |||| ||||    
T  10910308 gtatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgccg 10910390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 2780092 - 2779919
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| ||||||||| |||| |||||||||||||||||| |||||    
T  2780092 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttgaagatgacgccgttgggagacgtatcggaa 2779993  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  2779992 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 2779919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 31557671 - 31557847
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  |||||||||||||||||| |||||||||| || | |        ||| ||||||||||||||  || |||||||||||||| |||||    
T  31557671 agacaagacatcagagtattgggcacgtagtagctcgtgctatattacaccttcttggaaatcctctttggagatggcgtcgttgggagacgtatcggaa 31557770  T
Q  112 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||   |||||||| |||||||||    
T  31557771 ccatggctgagggcaggtaggtaaacaacttgcttggggatagaatcttggaagactttactggggaaaacgccgtt 31557847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 4206244 - 4206069
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||| |||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||| ||||||    
T  4206244 agacaagacattagagtgttgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtgccggaa 4206145  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||| |||||||||    
T  4206144 ccatggccgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 4206069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 26442113 - 26441938
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||| |||||||||||||| |||||    
T  26442113 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 26442014  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||  ||||||||||||||||||||||||  |||||| || ||||| |||||||||    
T  26442013 ccatggccgagggccggtaggtatgcaacttgctggggatagaatcttgagagaccccaccggggaaaacgccgtt 26441938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 45394027 - 45393913
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| ||||| |||||||| ||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |||    
T  45394027 tcctctttggagatgacgtcgttgagagacgtatcggaaccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttact 45393928  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  45393927 ggggaaaacgccgtt 45393913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 26596525 - 26596349
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||| ||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  26596525 agacaagacattagagtattgggcacgtagtggctcatgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 26596426  T
Q  112 cca-tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  26596425 ccaatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 26596349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 73 - 185
Target Start/End: Complemental strand, 3452038 - 3451926
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| ||||||||||||||||||| ||| |||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||    
T  3452038 tcctctttggagatgacgtcgttgggagacgtaccggagccaaggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctact 3451939  T
Q  173 ggggataacgccg 185  Q
    ||| |||| ||||    
T  3451938 gggaataatgccg 3451926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 22148736 - 22148563
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  22148736 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22148637  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | |||||| |||| ||||    
T  22148636 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgccg 22148563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 22152963 - 22152790
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  22152963 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22152864  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | |||||| |||| ||||    
T  22152863 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgccg 22152790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 22208878 - 22208705
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  22208878 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 22208779  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||| |||  |  ||||| ||||||||||| |||| ||||||| | |||||| |||| ||||    
T  22208778 ccctggctgagggcaggtaggcatgcaactggctggggataggatctcggaagactctactgggaataatgccg 22208705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 31130765 - 31130616
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||  ||||    
T  31130765 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 31130666  T
Q  112 cca-tggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    ||| ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  31130665 ccaatggctgagggcaggtagctatgcaacttgctggggatagaatcttg 31130616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 4138512 - 4138687
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  4138512 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 4138611  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| |||||||||||  || ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  4138612 ccatagctgagggcaggcaggtatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 4138687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 11447696 - 11447582
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||    
T  11447696 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 11447597  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  11447596 ggggaaaacgccgtt 11447582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 26519615 - 26519501
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||    
T  26519615 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 26519516  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  26519515 ggggaaaacgccgtt 26519501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 24585802 - 24585978
Alignment:
Q  20 agacaagacattg-gagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccgga 110  Q
    ||||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||||    
T  24585802 agacaagacatttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 24585901  T
Q  111 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||| ||||| ||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  24585902 accatagctgaaggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 24585978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 26268353 - 26268527
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||||     
T  26268353 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggac 26268452  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    | | ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||| |||||||||    
T  26268453 cta-ggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 26268527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 39206431 - 39206585
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  39206431 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 39206530  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||  |||||||||| | ||||||  |||||||||| |||||||||||||| ||||    
T  39206531 cctaggctgagggccggtagctatgcaacttgctgaggatagaatcttgggagac 39206585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 45738149 - 45737995
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  45738149 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 45738050  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||  |||||||||| | ||||||  ||| ||||||||||||||||||||| ||||    
T  45738049 cctaggctgagggccggtagctatgcaatttgctggggatagaatcttgggagac 45737995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 5140604 - 5140744
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgct-------acatcatagaag-tcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||       ||||  | | || |||||| ||||||| ||| | |||||||||||| |||||    
T  5140604 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcattgggagacgtatcggaa 5140703  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggata 152  Q
    ||||||| |||||| | ||| ||   |||||||||||||||    
T  5140704 ccatggccgagggccggtaggtatgtaacttgctggggata 5140744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 21696553 - 21696735
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgc-----taca---tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||     ||||   || | ||| |||||||||||||||||||||||||||||||    
T  21696553 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgcaatattacacattcctggaaatcctctttggagataacgccgttgggagacg 21696652  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||| | | ||||||||||| |||||    
T  21696653 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactggggataatgccgt 21696735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 27397211 - 27397031
Alignment:
Q  14 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgta 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |        ||| |||||||||||||||||| ||||||||||||||    
T  27397211 agagacagacaagacattggagtattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgta 27397112  T
Q  106 ccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
     ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| |  |||||||||| |||||    
T  27397111 tcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactccgctggggataatgccgt 27397031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 34268287 - 34268463
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       ||| | | ||| |||||||||||||||||| ||||||||||||    
T  34268287 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatgttacacattcctggaaatcctctttggagataacgtcgttgggagacg 34268386  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||||||||    
T  34268387 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactggggataa 34268463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 13929983 - 13930158
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  13929983 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 13930082  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  13930083 ccatggctgagggcaggtagctaaacaacttgctggagatagaatcttgggagacctgactggggagaacgccgtt 13930158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 23117652 - 23117471
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||| ||    
T  23117652 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggaggcg 23117553  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  23117552 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 23117471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 3789313 - 3789138
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  3789313 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 3789214  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||    
T  3789213 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgtt 3789138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 19409856 - 19410031
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||| |||||||||||||| |||||    
T  19409856 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 19409955  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  || ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  19409956 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgtt 19410031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 19449776 - 19449939
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatca--------tagaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||        ||||| |||||||||||||||||| ||||||||||||    
T  19449776 gcagagacagacaagacattggagtattgggcacgtagtggctcgcgctatatcacacattcttagaaatcctctttggagataacgtcgttgggagacg 19449875  T
Q  104 taccggaaccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||| | |||| ||  |||||||||||||||||||||| |||||||    
T  19449876 tatcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagac 19449939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 37932247 - 37932072
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||| ||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  37932247 agacaagacatcagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 37932148  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||    
T  37932147 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgtt 37932072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 16822710 - 16822885
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  16822710 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16822809  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  16822810 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 16822885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 16898770 - 16898595
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  16898770 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16898671  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  16898670 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 16898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 21670545 - 21670720
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  21670545 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 21670644  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  21670645 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaacgccgtt 21670720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 20844771 - 20844590
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||||| || | |        ||| || ||||||||||| ||| ||||||||||||    
T  20844771 gcagagacagacaagacactggagtattaggcacgtaatggctcgtgctatattacacattcctggaaatcatctttggagatgacgtcgttgggagacg 20844672  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  20844671 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 20844590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 254024 - 254199
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  254024 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 254123  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  254124 ccatagctgagggcaggtagatatacaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 254199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 11628557 - 11628732
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  11628557 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 11628656  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||| |||||||||    
T  11628657 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 11628732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 16168348 - 16168173
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  16168348 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 16168249  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  16168248 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 16168173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 27810573 - 27810398
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  27810573 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 27810474  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  27810473 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 27810398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 32056622 - 32056447
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||| ||  |||||    
T  32056622 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagatgtgtcggaa 32056523  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  32056522 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 32056447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 34298019 - 34297856
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  34298019 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 34297920  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 175  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | ||||||    
T  34297919 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactggg 34297856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 39896939 - 39896764
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  39896939 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 39896840  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||||||||   |||||||| |||||||||    
T  39896839 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaagactttactggggaaaacgccgtt 39896764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 28889110 - 28888929
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  28889110 gcagagacagacaagatgttggagtattgggcatgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 28889011  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  28889010 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 28888929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 9343359 - 9343534
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  9343359 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 9343458  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  9343459 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 9343534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 27427837 - 27428000
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| ||||| |||||||| ||| ||||||||||||    
T  27427837 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctccttggagatgacgtcgttgggagacg 27427936  T
Q  104 taccggaaccatggctgagggcagatagctaat-caacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||||| ||||| || |||||||||||||| ||||||| |||||||    
T  27427937 tatcggaaccatggctgagggcaggtagcttatgcaacttgctggggacagaatctcggaagac 27428000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 37679270 - 37679445
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||| |||||||||||||| |||||    
T  37679270 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 37679369  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  37679370 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 37679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 37694535 - 37694710
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||| |||||||||||||| |||||    
T  37694535 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 37694634  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  37694635 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 37694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 37945237 - 37945412
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||| ||  |||||    
T  37945237 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagatgtgtcggaa 37945336  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  37945337 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 37945412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 39045254 - 39045430
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | ||| |||||||||||||| ||| |||||||||||||  |||||    
T  39045254 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 39045353  T
Q  112 ccatggctgagggcagatagctaatcaac-ttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  |||| ||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  39045354 ccatagctgagggcaggtagatatgcaactttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 39045430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 12593684 - 12593509
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||| |||||||||||||| |||||    
T  12593684 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 12593585  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  12593584 ccatggccgagggccggtaggtatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 12593509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 37384525 - 37384371
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| || ||| ||||||| ||| |||||||||||||| |||||    
T  37384525 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatgacgtcgttgggagacgtatcggaa 37384426  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| |||||||    
T  37384425 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagac 37384371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 31868173 - 31868354
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| ||||||||||||    
T  31868173 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 31868272  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| |||  |||||||||| | ||| ||   |||||| |||||||||||||| ||||||| | |||||| |||| ||||    
T  31868273 tatcgggacctaggctgagggccggtaggtatgaaacttgatggggatagaatctcggaagactctactgggaataatgccg 31868354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 31883141 - 31882987
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| | |||    
T  31883141 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 31883042  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||    
T  31883041 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac 31882987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 12662346 - 12662165
Alignment:
Q  13 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgt 104  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||    
T  12662346 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 12662247  T
Q  105 accggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccg 185  Q
    | ||| ||||||||||||||||| ||| ||  |||||||| || ||||||||||| ||||||| | |||||| |||| ||||    
T  12662246 atcgggaccatggctgagggcaggtaggtatgcaacttgcttgaggatagaatctcggaagactctactgggaataatgccg 12662165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 22921516 - 22921691
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  22921516 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 22921615  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  22921616 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 22921691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 34161711 - 34161536
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | ||| |||||||||||||| ||| |||||||||||||| | ||     
T  34161711 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagag 34161612  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| |||||||||| | ||| ||  ||||||||||||||||||||||||  |||| | || ||||| |||||||||    
T  34161611 ccaaggctgagggctggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 34161536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 12709996 - 12710169
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||| ||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||  ||||    
T  12709996 agacaagacatcagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 12710095  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  | ||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  12710096 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgccg 12710169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 34868443 - 34868329
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||    
T  34868443 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 34868344  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  34868343 ggggaaaacgccgtt 34868329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 27123370 - 27123216
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  27123370 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 27123271  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  27123270 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 27123216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 27783093 - 27782918
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| | | |||||| ||||||| |||||    
T  27783093 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgatgtcgttggtagacgtatcggaa 27782994  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||   |||||||||||||||||||||||  |||| | |||||| | |||||||||    
T  27782993 ccatggccgagggccggtaggtatgtaacttgctggggatagaatcttgagagactccactgggaaaaacgccgtt 27782918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 40240393 - 40240245
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    ||||||||| || |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||| |||||||||||||| |||||    
T  40240393 agacaagacgttagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 40240294  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||    
T  40240293 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttg 40240245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 3790514 - 3790473
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta 61  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  3790514 agacaagacattagagtattgggcacgtggtggctcgtgcta 3790473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 12 - 178
Target Start/End: Complemental strand, 22895292 - 22895118
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  22895292 gcagagacagacaagtcattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 22895193  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggat 178  Q
    || ||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| | |||||||||    
T  22895192 tatcggaaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactggggat 22895118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 15752142 - 15752317
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||| |||||||||||||| |||||    
T  15752142 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 15752241  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||    
T  15752242 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgtt 15752317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 23898761 - 23898578
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  23898761 gcagagacagacaagacattggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 23898662  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||||||||||||||||||||| ||||||  |||||||| |||||||||||||| ||||||| | ||||||||||| |||||    
T  23898661 tatcggaaccatggctgagggcaggtagctatgcaacttgcttggggatagaatctcggaagactctactggggataatgccgt 23898578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 30036303 - 30036128
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||| |||||||||||||| |||||    
T  30036303 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 30036204  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  || |||||||||||||||||||||||||||||||||||||| |||||||||    
T  30036203 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgactggggaaaacgccgtt 30036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 23727102 - 23726921
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  23727102 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 23727003  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  23727002 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 23726921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 22992417 - 22992593
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  22992417 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 22992516  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| ||||    
T  22992517 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataa 22992593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 6881170 - 6880995
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  6881170 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 6881071  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||||||||||    
T  6881070 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataacgccgtt 6880995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 31819766 - 31819880
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||    
T  31819766 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgact 31819865  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  31819866 ggggaaaacgccgtt 31819880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 33523261 - 33523086
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  33523261 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 33523162  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  33523161 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 33523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 24609110 - 24608929
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||| ||||| ||||||    
T  24609110 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgagagacg 24609011  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24609010 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24608929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 24976709 - 24976528
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  24976709 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 24976610  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24976609 tatcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24976528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 23632834 - 23632659
Alignment:
Q  13 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgt 104  Q
    ||||||||||||||||| |||||| |||||||||  ||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||    
T  23632834 cagagacagacaagacactggagtgttgggcacgcggtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgt 23632735  T
Q  105 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    | ||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| | |||||| ||||    
T  23632734 atcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactgggaataa 23632659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 25207173 - 25206998
Alignment:
Q  13 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgccgttgggagacgt 104  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| | | |        | |||||||||||||||||| ||| |||||||||    
T  25207173 cagagatagtcaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgt 25207074  T
Q  105 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    | | |||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||| ||||||    
T  25207073 atcagaaccagggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgaggataa 25206998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 25271329 - 25271154
Alignment:
Q  13 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgccgttgggagacgt 104  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| | | |        | |||||||||||||||||| ||| |||||||||    
T  25271329 cagagatagtcaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctgggaatcctctttggagataacgtcgtcgggagacgt 25271230  T
Q  105 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    | | |||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||| ||||||    
T  25271229 atcagaaccagggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgaggataa 25271154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 32589559 - 32589734
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||| |||||||||||||  |||||    
T  32589559 agacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtgtcggaa 32589658  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||| ||||| ||||||||| |||||||||    
T  32589659 ccatagctgagggcaggtagatatacaacttgctggagatagaatcttgggagacctgactggggagaacgccgtt 32589734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 37351948 - 37352123
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  37351948 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 37352047  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||| |  ||||   ||||||||||| ||||||    
T  37352048 ccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgagagactttactggggataatgccgtt 37352123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 40466833 - 40467008
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  40466833 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 40466932  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  40466933 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 40467008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 28953079 - 28953254
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacat--catag------aagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  ||||       || |||||||||||||| ||| |||||||||||||| ||| |    
T  28953079 agacaagacattggagtattgggcacgtagtggctcgtgctatattacatattcttgaaaatcctctttggagatgacgtcgttgggagacgtatcggga 28953178  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  || ||||||||||| ||||||| |||||||   |||||||| |||||||||    
T  28953179 ccatggctgagggcaggtagctatgcatcttgctggggacagaatctcggaagactttactggggaaaacgccgtt 28953254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 9544012 - 9544185
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  9544012 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 9544111  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | |||||| |||| ||||    
T  9544112 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 9544185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 9324341 - 9324165
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  9324341 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 9324242  T
Q  112 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| |||||||||    
T  9324241 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgtt 9324165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 11556219 - 11556043
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| ||||||||||||    
T  11556219 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 11556120  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || ||| |||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | |||||| ||||    
T  11556119 tatcgggacctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataa 11556043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 26487251 - 26487075
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  26487251 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 26487152  T
Q  112 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| |||||||||    
T  26487151 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgtt 26487075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 12139039 - 12138864
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| ||||     
T  12139039 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 12138940  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||| |||||||||    
T  12138939 ccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 12138864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 33881983 - 33881808
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    ||||||||| || ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| ||| |    
T  33881983 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggga 33881884  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||  |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  33881883 cctaggctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 33881808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 18494052 - 18494227
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||| |||||||||||||||       ||| | | ||| |||||||||||||| ||| |||||||||||||| |||||    
T  18494052 agacaagacatcagagtattgggcacatagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18494151  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||||||||||   ||||||  ||||||||||||||||||||||||| |||| | || ||||| |||||||||    
T  18494152 ccatggctgagggccagtagctatgcaacttgctggggatagaatcttgggagactctaccggggaaaacgccgtt 18494227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 30941492 - 30941314
Alignment:
Q  15 gagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtac 106  Q
    ||||||||||||||| |||||||||||||||  |||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||     
T  30941492 gagacagacaagacactggagtattgggcacacagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtat 30941393  T
Q  107 cggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| | |||||| |||| ||||    
T  30941392 cgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgccg 30941314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 37745635 - 37745781
Alignment:
Q  22 acaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaacc 113  Q
    |||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||||    
T  37745635 acaagacatcagagtattgggcacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaacc 37745734  T
Q  114 atggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    |||||||||||||| ||||||  ||||| ||||||||||||||||||    
T  37745735 atggctgagggcaggtagctatgcaactcgctggggatagaatcttg 37745781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 2517922 - 2517749
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||||||||     
T  2517922 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtaccggag 2517823  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||| ||||||||||||  || ||  ||||||||||| |||||||||||| |||||   ||||||||||| ||||    
T  2517822 ccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggataatgccg 2517749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 18121717 - 18121886
Alignment:
Q  20 agacaagacattg-gagtattgggcacgtagtggctcgtgctacatca--------tagaagtcctctttggagataacgccgttgggagacgtaccgga 110  Q
    ||||||||||||  ||||||||||||||||||||||||||||| ||||        | ||| |||||||||||||| ||| |||||||||||||  ||||    
T  18121717 agacaagacatttagagtattgggcacgtagtggctcgtgctatatcacgcattcctggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 18121816  T
Q  111 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    |||| |||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| ||||    
T  18121817 accaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataa 18121886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 33299401 - 33299220
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| ||||||||||||    
T  33299401 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 33299302  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| |||  ||| |||||| | ||||||  |||||||||||||||||||| | || |||| | |||||| |||| ||||    
T  33299301 tatcgggacctaggcggagggccggtagctatgcaacttgctggggatagaatatcgggagactctactgggaataatgccg 33299220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 33784347 - 33784166
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| ||||||||||||    
T  33784347 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacgcattcctggaaatcctctttggagatgacgtcgttgggagacg 33784248  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| |||   | ||||||| | ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  33784247 tatcgggacctaagttgagggccggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 33784166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 43085124 - 43084956
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctaca-tcatagaagtcctctttggagataacgccgttgggagacgtaccggaaccatggc 118  Q
    |||||||||||| |||||||||||||||| |||||||||||| | || | ||| |||||| ||||||| ||| |||||||||||||| ||||||||||||    
T  43085124 agacaagacattagagtattgggcacgtaatggctcgtgctatattcttggaaatcctctctggagatgacgtcgttgggagacgtatcggaaccatggc 43085025  T
Q  119 tgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
     |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||| |||||||||    
T  43085024 cgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgtt 43084956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 13180093 - 13180241
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| ||||||||||||    
T  13180093 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 13180192  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggata 152  Q
    || ||| ||||||||||||||||| ||| ||  ||||| ||||||||||    
T  13180193 tatcgggaccatggctgagggcaggtaggtatgcaactcgctggggata 13180241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 3796410 - 3796235
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| ||||     
T  3796410 agacaagacattagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 3796311  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||| |||||||||    
T  3796310 ccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 3796235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 30158897 - 30158722
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| | |||    
T  30158897 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 30158798  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| ||||||||  || ||| ||  ||||||||||| ||||||||||||||||||  ||||||||| || ||||||    
T  30158797 ccaaggctgaggataggtaggtatgcaacttgctggagatagaatcttggaagacttgactggggaaaatgccgtt 30158722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 37761790 - 37761676
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    ||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||| |||||   ||||||||||| ||||||||||||||||||   |||    
T  37761790 tcctctttgaagatgacgtcgttgggagacgtatcggaaccatggctgagggcaggtagctgtgcaacttgctggagatagaatcttggaagactttact 37761691  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  37761690 ggggaaaacgccgtt 37761676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 15652045 - 15652218
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| | | |||||||||||||  || ||    
T  15652045 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgatgtcgttgggagacgtgtcgaaa 15652144  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||| |||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  15652145 ccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 15652218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 31438314 - 31438141
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||  ||||    
T  31438314 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 31438215  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||  ||  ||||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  31438214 ccatggctgagggcaggtaagtatgcaacttgctggggatagaatcttgagagactttactggggataatgccg 31438141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 11330511 - 11330336
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||| ||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  11330511 agacaagacattagagtattgggcacgtagcggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 11330412  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||  ||||| ||||||||| || ||||||    
T  11330411 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagacctgactggggaaaatgccgtt 11330336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 30175345 - 30175170
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| || ||||||||||| ||| |||||||||||||  |||||    
T  30175345 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcttctttggagatgacgtcgttgggagacgtgtcggaa 30175246  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  30175245 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 30175170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 34623376 - 34623201
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| ||||     
T  34623376 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 34623277  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| ||||| |||||| ||| ||  ||||||||||||||||||||||||  |||| | || ||||| |||||||||    
T  34623276 ccaaggctgggggcaggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 34623201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 8658777 - 8658931
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  |||| |||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| || ||||||||||| |||||    
T  8658777 agacaagacatcagagtgttgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgctgggagacgtatcggaa 8658876  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    |||||||||||||||| ||||||  |||||||||||  ||||||||| |||||||    
T  8658877 ccatggctgagggcaggtagctatgcaacttgctggaaatagaatctcggaagac 8658931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 24730826 - 24730653
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||| ||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||  ||||    
T  24730826 agacaagacatcagagtattgggcacgtagtggcccgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 24730727  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  | ||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  24730726 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgccg 24730653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 41681564 - 41681408
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacat----cat------agaagtcctctttggagataacgccgttgggagacgtaccgg 109  Q
    ||||||| |||| ||||||||||||||||||||||||||||| ||    |||      | || |||||||||||||| ||| |||||||||||||  |||    
T  41681564 agacaagtcattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaaaatcctctttggagatgacgtcgttgggagacgtgtcgg 41681465  T
Q  110 aaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||||||| |||||||||| || |||  |||||||||||||||||||||| |||||||    
T  41681464 aaccatgactgagggcaggtaactatgcaacttgctggggatagaatctcggaagac 41681408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 5644677 - 5644502
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  5644677 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5644578  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||  || |||||||||  || | | |||||||| |||||||||    
T  5644577 ccatagctgagggcaggtagatatgcaacttgctgtagacagaatcttgagaggctccactggggaaaacgccgtt 5644502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 28656122 - 28655947
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | ||| || ||||||||||| ||| |||||||||||||| ||||     
T  28656122 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcttctttggagatgacgtcgttgggagacgtatcggag 28656023  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
     || |||||||||||| ||| ||  || |||||||||||||||||||||  |||| | || ||||| |||||||||    
T  28656022 tcaaggctgagggcaggtaggtatgcaccttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 28655947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 13318110 - 13318285
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  13318110 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 13318209  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||  ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||||||| |||||||||    
T  13318210 cctaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 13318285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 13435953 - 13436128
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| | |||||||||||| | ||     
T  13435953 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcattgggagacgtatcagag 13436052  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| |||||||||| | ||| ||  ||||||||||||||||||||||||  |||| | || ||||| |||||||||    
T  13436053 ccaaggctgagggctggtaggtatgcaacttgctggggatagaatcttgagagactccaccggggaaaacgccgtt 13436128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 37664788 - 37664961
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    ||||||||| || ||||||||||||||||||||||||||||| |        || | ||| |||||||||||||| ||| |||||||||||||  |||||    
T  37664788 agacaagacgttagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 37664887  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||| |||||||||  |  || ||  ||||||||||| |||||||||||| |||||   |||||||| |||||||    
T  37664888 ccaaggctgagggtgggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggaaaacgccg 37664961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 18368814 - 18368989
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  | |||| ||||||| ||| |||||||||||||| |||||    
T  18368814 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagattctctatggagatgacgtcgttgggagacgtatcggaa 18368913  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||   |||||||||||||||||  ||||  |||| | |||||||| |||||||||    
T  18368914 ccatggccgagggccggtaggtatgtaacttgctggggatagagccttgagagactccactggggaaaacgccgtt 18368989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 13178783 - 13178824
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta 61  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  13178783 agacaagacattagagtattgggcacgtggtggctcgtgcta 13178824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 4e-46; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 15234708 - 15234526
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  15234708 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 15234609  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||||| |  |||||||||| |||||    
T  15234608 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgt 15234526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 1907157 - 1906975
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||| | ||||||||||    
T  1907157 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcattgggagacg 1907058  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||| | | ||||||||||| |||||    
T  1907057 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactggggataatgccgt 1906975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 24585747 - 24585929
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  24585747 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 24585846  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||| ||||||||||||||||||||||||  |||||||||||||||||||||| || |||| | |||||| |||| |||||    
T  24585847 tatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccgt 24585929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 54840272 - 54840097
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    ||||||||||||||| |||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  54840272 agacaagacattggattattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 54840173  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  54840172 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgtt 54840097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 15276002 - 15276164
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |        ||| ||||||||||||||||||  |||||||||||    
T  15276002 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggagataacgttgttgggagacg 15276101  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||||| ||||||  | |||||||||||| ||||||| |||||||    
T  15276102 tatcggaaccatggctgagggcaggtagctatgcgacttgctggggacagaatctcggaagac 15276164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 15379614 - 15379776
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |        ||| ||||||||||| |||||| ||||||||||||    
T  15379614 gcagagacagacaagacattggaatattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacg 15379713  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  15379714 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 15379776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 14671879 - 14671717
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  14671879 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 14671780  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  14671779 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 14671717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 31119894 - 31120069
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  31119894 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 31119993  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  31119994 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 31120069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 17019917 - 17019737
Alignment:
Q  13 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgt 104  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||    
T  17019917 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 17019818  T
Q  105 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    | ||||||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  17019817 atcggaaccatggctgagggcaggtagttatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 17019737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 20331819 - 20331994
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  20331819 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 20331918  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  20331919 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 20331994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 21976585 - 21976410
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||| ||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  21976585 agacaagatatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 21976486  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  21976485 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 21976410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 27156710 - 27156885
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  27156710 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 27156809  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  27156810 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 27156885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 6576718 - 6576544
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctcttt-ggagataacgccgttgggagacgtaccgga 110  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||| |||||| ||| |||||||||||||| ||||    
T  6576718 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctcttttggagatgacgtcgttgggagacgtatcgga 6576619  T
Q  111 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||||||||||||||||| ||  ||  |||||||||||||||||||||| ||||||| | ||||||||||| ||||    
T  6576618 accatggctgagggcaggtaagtatgcaacttgctggggatagaatctcggaagactccactggggataatgccg 6576544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 14752900 - 14753073
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  14752900 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14752999  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  14753000 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 14753073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 181
Target Start/End: Complemental strand, 5012763 - 5012593
Alignment:
Q  20 agacaagacattggagtattggg-cacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccgga 110  Q
    |||||||||||| |||| ||||| ||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||||    
T  5012763 agacaagacattagagtgttggggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcgga 5012664  T
Q  111 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataac 181  Q
    |||| |||||||||||| ||| ||  ||||||||||||||||||||||||  |||||||||||||||||||    
T  5012663 accacggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacccgactggggataac 5012593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 39857496 - 39857342
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| || ||| ||||||| ||| |||||||||||||| |||||    
T  39857496 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaattcttctgtggagatgacgtcgttgggagacgtatcggaa 39857397  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| |||||||    
T  39857396 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagac 39857342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 36323721 - 36323894
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        ||| ||||| |||||||| ||| |||||||||||||| |||||    
T  36323721 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctccttggagatgacgtcgttgggagacgtatcggaa 36323820  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  36323821 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 36323894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 36337930 - 36338103
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        ||| ||||| |||||||| ||| |||||||||||||| |||||    
T  36337930 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctccttggagatgacgtcgttgggagacgtatcggaa 36338029  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| |||  |  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  36338030 ccatggctgagggcaggtaggcatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 36338103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 40099017 - 40099192
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  40099017 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 40099116  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  40099117 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 40099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 5701410 - 5701256
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| | |||    
T  5701410 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 5701311  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||    
T  5701310 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac 5701256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 18794027 - 18794175
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  18794027 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18794126  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||    
T  18794127 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttg 18794175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 33667246 - 33667360
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||    
T  33667246 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 33667345  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  33667346 ggggaaaacgccgtt 33667360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 186
Target Start/End: Original strand, 34182341 - 34182515
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||| ||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  34182341 agacaagacattagagtattgggcacatagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggga 34182440  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    ||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | |||||| |||| |||||    
T  34182441 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgccgt 34182515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 14105425 - 14105250
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||| |||||||||||||| |||||    
T  14105425 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 14105326  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||  | ||| ||   ||||||||||||||||| |||||  |||| | |||||||| |||||||||    
T  14105325 ccatggccgagggtcggtaggtatgtaacttgctggggatagagtcttgagagactccactggggaaaacgccgtt 14105250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 24119523 - 24119349
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcataga---------agtcctctttggagataacgccgttgggagacgtaccgga 110  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | | |         | |||||||||||||| ||  |||||||||||||| |||     
T  24119523 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaaatcctctttggagatgacatcgttgggagacgtatcggg 24119424  T
Q  111 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||| ||||||||||   ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24119423 accaaggctgagggccagtagatatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24119349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 30760584 - 30760470
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||| ||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||    
T  30760584 tcctttttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 30760485  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  30760484 ggggaaaacgccgtt 30760470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 24814685 - 24814726
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta 61  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  24814685 agacaagacattagagtattgggcacgtagtggctcgtgcta 24814726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 24813781 - 24813822
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta 61  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  24813781 agacaagacattagagtattgggcacgtggtggctcgtgcta 24813822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 19701233 - 19701055
Alignment:
Q  16 agacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| || ||||||||||||||||| |||||||||||| |    
T  19701233 agacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcttctttggagataacgccattgggagacgtatc 19701134  T
Q  108 ggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    ||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||||| | ||||||||||| |||||    
T  19701133 ggaaccatgactgagggcaggtagctatacaacttgctggggatagaatctcggaagactctactggggataatgccgt 19701055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 4728446 - 4728265
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  4728446 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 4728347  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  4728346 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 4728265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 5658954 - 5658773
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  5658954 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacaccttcctggaaatcctctttggagatgacgtcgttgggagacg 5658855  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  5658854 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 5658773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 6208715 - 6208534
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  6208715 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 6208616  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  ||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  6208615 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 6208534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 28109388 - 28109564
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  28109388 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28109487  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagaccc-gactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||| |||| ||||||||| |||||||||    
T  28109488 ccatggctgagggcaggtagctaaacaacttgctggagatagaatcttggaaaaccctgactggggaaaacgccgtt 28109564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 24335010 - 24334835
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||| ||| ||| |||||||||||||| |||||    
T  24335010 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggggatgacgtcgttgggagacgtatcggaa 24334911  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  || ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  24334910 ccatggctgagggcaggtagctatgcatcttgctggggatagaatcttggaagaccccactggggaaaacgccgtt 24334835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 15886157 - 15886339
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  15886157 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 15886256  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||||||||||||||||||||| ||||||  || ||||||||||||||||||| ||||||| | |||||| |||| |||||    
T  15886257 tatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactctactgggaataatgccgt 15886339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 18058088 - 18057907
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  18058088 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 18057989  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  18057988 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 18057907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 22381020 - 22381201
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||        ||| |||||||||||||| ||| ||||||||||||    
T  22381020 gcagagacagacaggacattggagtattgggcacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacg 22381119  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  22381120 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 22381201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 29142194 - 29142375
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| ||||||| |||||| ||| ||||||||||||    
T  29142194 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacg 29142293  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  29142294 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 29142375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 18337444 - 18337268
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| || |||        ||| |||||||||||||| ||| ||||||||||||    
T  18337444 gcagagacagacaggacattggagtattgggcacgtagtggctcgtgctatattatactttcctggaaatcctctttggagatgacgtcgttgggagacg 18337345  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    |  ||||||| ||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| ||||    
T  18337344 tgtcggaaccctggctgagggcaggtagctacgcaacttgctggggatagaatcttgggagactctactgggaataa 18337268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 13 - 186
Target Start/End: Complemental strand, 15368085 - 15367903
Alignment:
Q  13 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |        ||| |||||||||||||||||| | |||||||||||    
T  15368085 cagagacagacaagacattggagtattgggcacgtagtggctcgcgctacatcacacattcttggaaatcctctttggagataacgtcattgggagacgt 15367986  T
Q  105 accggaaccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    | ||||||||||| ||||||| | |||| ||  |||||||||||||||||||||| ||||||| |  |||||||||| |||||    
T  15367985 atcggaaccatggttgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactctgctggggataatgccgt 15367903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 16423027 - 16422845
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||| || |||||||||||| |||||||||||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  16423027 gcagagacagacaaggcactggagtattgggtacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacg 16422928  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||||||||||||||||||||| ||| ||  |||||||| ||||||||||||| ||||||| | ||||||||||| |||||    
T  16422927 tatcggaaccatggctgagggcaggtagttatgcaacttgcaggggatagaatctcggaagactctactggggataatgccgt 16422845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 18232026 - 18231851
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  18232026 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 18231927  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18231926 ccatagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 18231851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 4790071 - 4790252
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| || | |        ||| ||||||| |||||| ||| ||||||||||||    
T  4790071 gcagagacagacaagacattggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctcttcggagatgacgtcgttgggagacg 4790170  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||||||  |||||||||  |||||||||||||| |||| | |||||| |||| ||||    
T  4790171 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctactgggaataatgccg 4790252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 11103809 - 11103982
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  11103809 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 11103908  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  11103909 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 11103982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 16617907 - 16618084
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |        ||| ||||||||||||||| || ||||||||||||    
T  16617907 gcagagacagacaagacattggagtattgggcacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacg 16618006  T
Q  104 taccggaaccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
     | ||||||||||||||||||| | |||| ||  |||||||||||||||||||||| ||||||| |  ||||||||||    
T  16618007 catcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagactccgctggggataa 16618084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 22 - 187
Target Start/End: Original strand, 17978378 - 17978551
Alignment:
Q  22 acaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaacc 113  Q
    |||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||||    
T  17978378 acaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacc 17978477  T
Q  114 atggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    || ||||||||||| ||||||  || |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  17978478 atagctgagggcaggtagctatgcatcttgctggggatagaatcttggaagacccgaccggggaaaacgccgtt 17978551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 35887580 - 35887399
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcataga--------agtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || | | |        | |||||||||||||| ||| ||||||||||||    
T  35887580 gcagagacagacaagacattgaagtattgggcacgtagtggctcgtgctatattacacattcctgaaaatcctctttggagatgacgtcgttgggagacg 35887481  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  ||||||||||||||||||||| ||||||  |||||||||||||||||| |||||| |||| | |||||| |||| ||||    
T  35887480 tgtcggaaccatggctgagggcaggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgccg 35887399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 8282900 - 8283076
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  8282900 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 8282999  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| ||||    
T  8283000 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggtataa 8283076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 15734558 - 15734710
Alignment:
Q  14 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgta 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||    
T  15734558 agagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgta 15734657  T
Q  106 ccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 158  Q
     ||| ||||||| ||||||||| ||||||  ||||||||||||||||||||||    
T  15734658 tcgggaccatggttgagggcaggtagctatgcaacttgctggggatagaatct 15734710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 22041250 - 22041087
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |        ||| ||||||||||||||| || ||||||||||||    
T  22041250 gcagagacagacaagacattggagtattgggcacgtagtagctcgtgctatatcacacattcttggaaatcctctttggagatatcgtcgttgggagacg 22041151  T
Q  104 taccggaaccatggctgagggcagatagc-taatcaacttgctggggatagaatcttggaagac 166  Q
     | ||||||||||||||||||| | |||| ||  |||||||||||||||||||||| |||||||    
T  22041150 catcggaaccatggctgagggcgggtagcatatgcaacttgctggggatagaatctcggaagac 22041087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 4690495 - 4690313
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  4690495 gcagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 4690396  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| |||||    
T  4690395 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccgt 4690313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 31029691 - 31029864
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  31029691 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31029790  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  31029791 ccacggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 31029864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 187
Target Start/End: Complemental strand, 5717886 - 5717714
Alignment:
Q  23 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaacca 114  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||||||||    
T  5717886 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5717787  T
Q  115 tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  5717786 tagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 5717714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 187
Target Start/End: Complemental strand, 5728796 - 5728624
Alignment:
Q  23 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaacca 114  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||||||||    
T  5728796 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5728697  T
Q  115 tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  5728696 tagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 5728624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 187
Target Start/End: Original strand, 5763572 - 5763744
Alignment:
Q  23 caagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaacca 114  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||||||||    
T  5763572 caagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaacca 5763671  T
Q  115 tggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    | ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  5763672 tagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 5763744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 5020545 - 5020370
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  5020545 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 5020446  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   |||||||| |||||||||    
T  5020445 ccatagctgagggcaggtagatatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccgtt 5020370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 6536168 - 6536343
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||| |||||||||||||| |||||    
T  6536168 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 6536267  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |||||||| |||||||||    
T  6536268 ccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 6536343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 10649904 - 10649730
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  10649904 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggaa 10649805  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||||||| |  |||||||| |||||||||    
T  10649804 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttggaaga-cttactggggaaaacgccgtt 10649730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 29658392 - 29658567
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||       ||| | | ||| |||||||||||||| ||| |||||||||||||   ||||    
T  29658392 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgttggaa 29658491  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  29658492 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 29658567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 4340124 - 4340297
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| ||||     
T  4340124 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggag 4340223  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||| |||||||||||| ||| ||  ||||||||||||||||||||||||| |||| | ||||||||||| ||||    
T  4340224 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactctactggggataatgccg 4340297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 5473801 - 5473628
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  5473801 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 5473702  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  ||||| |||||||||||||||| ||||||| | |||||| |||| ||||    
T  5473701 ccatggctgagggcaggtaggtatgcaactcgctggggatagaatctcggaagactctactgggaataatgccg 5473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 18285804 - 18285977
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  18285804 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18285903  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  18285904 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 18285977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 18301105 - 18301278
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||| ||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  18301105 agacgagacatcagagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 18301204  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  18301205 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 18301278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 32445964 - 32445791
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  |||||||||||||||||||||||||||||       ||| | | ||| |||||||||| ||| ||| |||||||||||||  |||||    
T  32445964 agacaagacatcagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatgacgtcgttgggagacgtgtcggaa 32445865  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| |||| | |||||| |||| ||||    
T  32445864 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagactctactgggaataatgccg 32445791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 5589781 - 5589956
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  5589781 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5589880  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||| | ||||||||||||||||||| ||||||||| || ||||||    
T  5589881 ccatagctgagggcaggtaggtatgcaacttgctagagatagaatcttggaagacctgactggggaaaatgccgtt 5589956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 22864289 - 22864464
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||| |||||||||||||| |||||    
T  22864289 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 22864388  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||| ||||   |||||||| |||||||||    
T  22864389 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactttactggggaaaacgccgtt 22864464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 22879348 - 22879523
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||| |||||||||||||| |||||    
T  22879348 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 22879447  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||| ||||   |||||||| |||||||||    
T  22879448 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgggagactttactggggaaaacgccgtt 22879523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 4423730 - 4423557
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||||  ||||    
T  4423730 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtattggaa 4423631  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  4423630 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggataatgccg 4423557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 4630593 - 4630420
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------cat-catagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  |||||||||||||||||||||||||||||       ||| | | ||| |||||||||| ||| ||| |||||||||||||  |||||    
T  4630593 agacaagacatcagagtattgggcacgtagtggctcgtgctatgttacacattcttggaaatcctctttggtgatgacgtcgttgggagacgtgtcggaa 4630494  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||  ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  4630493 ccatggctgagggcatgtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 4630420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 17970305 - 17970481
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||| ||  ||||    
T  17970305 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacatattggaa 17970404  T
Q  112 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| |||||||||    
T  17970405 ccatggctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgtt 17970481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 47030290 - 47030114
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  || |||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||| |||||||||||| | |||||    
T  47030290 agacaagacatcagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgcatcggaa 47030191  T
Q  112 ccatggctgagggcagatagctaatcaac-ttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  |||| ||||||| |||||||||||||||||| | |||||||| |||||||||    
T  47030190 ccatggctgagggcaggtagctatgcaactttgctggagatagaatcttggaagactccactggggaaaacgccgtt 47030114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 28346005 - 28345830
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  28346005 agacaagacattagagtattgggcacgtagtggctcgtgctatattacaccttcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 28345906  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  28345905 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 28345830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 32297465 - 32297290
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||| |||||||||||||| |||||    
T  32297465 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 32297366  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||  ||||| ||||| ||||||||||||||||||| ||||||||| || ||||||    
T  32297365 ccatggccgagggccggtaggtatgcaactcgctggagatagaatcttggaagacctgactggggaaaatgccgtt 32297290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 5602738 - 5602913
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  5602738 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 5602837  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  5602838 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 5602913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 20570281 - 20570456
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||| |||||||||||||| |||||    
T  20570281 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggagacgtatcggaa 20570380  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||| | | ||| ||   |||||||||||||||||||||||  |||| | |||||||| |||||||||    
T  20570381 ccatggccgaggaccggtaggtatgtaacttgctggggatagaatcttgagagactccactggggaaaacgccgtt 20570456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 16404217 - 16404392
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||| ||||||| |||||| ||||     
T  16404217 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggag 16404316  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| |||||||||||| ||| ||  ||||||||||||||||||||||||  |||||  || ||||| |||||||||    
T  16404317 ccaaggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagacctcaccggggaaaacgccgtt 16404392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 51788795 - 51788681
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||    
T  51788795 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 51788696  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  51788695 ggggaaaacgccgtt 51788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 7079968 - 7079867
Alignment:
Q  84 gataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgc 183  Q
    ||||||| |||||||||||||  |||||||| |||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||    
T  7079968 gataacgtcgttgggagacgtgtcggaaccaaggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgc 7079869  T
Q  184 cg 185  Q
    ||    
T  7079868 cg 7079867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 20072847 - 20072693
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  20072847 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 20072748  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  20072747 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 20072693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 48472744 - 48472590
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  48472744 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 48472645  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  48472644 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 48472590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 31957881 - 31958029
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||  ||||||||||||  |||||    
T  31957881 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgttgttgggagacgtgtcggaa 31957980  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||    
T  31957981 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttg 31958029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 18249552 - 18249377
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||| ||||||| ||| ||||||| |||||| |||||    
T  18249552 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctatggagatgacgtcgttgggggacgtatcggaa 18249453  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||  |||| | || ||||| |||||||||    
T  18249452 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgtt 18249377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 10402986 - 10402811
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||| |||||||||||||| |||||    
T  10402986 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 10402887  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| | |||| | ||| ||   ||||||||||||||||| |||||  |||||| || ||||| |||||||||    
T  10402886 ccatggccgggggccggtaggtatgtaacttgctggggatagagtcttgagagaccccaccggggaaaacgccgtt 10402811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 21681554 - 21681406
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||  |||||| ||||||| ||| |||||||||||||| |||||    
T  21681554 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 21681455  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttg 160  Q
    ||||||| |||||| | ||| ||   ||||||||||||||||| |||||    
T  21681454 ccatggccgagggccggtaggtatgtaacttgctggggatagagtcttg 21681406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 28028105 - 28027930
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| | |        ||| ||||||| |||||| ||| |||||||||||||  ||| |    
T  28028105 agacaagacattagagtaatgggcaagtagtggctcgtgctacattacacattcttggaaatcctcttcggagatgacgtcgttgggagacgtgtcggga 28028006  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||  |||||||||| | ||| ||  ||||||||||||||||||||||||  ||||   |||||||| |||||||||    
T  28028005 cctaggctgagggccggtaggtatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccgtt 28027930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 8218398 - 8218284
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||| ||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |||||||||| |||||| |||||  |||| | |||    
T  8218398 tcctctatggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaacttgctggagatagagtcttgagagactccact 8218299  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  8218298 ggggaaaacgccgtt 8218284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 7080063 - 7080022
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta 61  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  7080063 agacaagacattagagtattgggcacgtagtggctcgtgcta 7080022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 16599447 - 16599406
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta 61  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  16599447 agacaagacattagagtattgggcacgtagtggctcgtgcta 16599406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 4e-43; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 2130623 - 2130804
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  2130623 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 2130722  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  2130723 tatcgggaccatggctgagggcagatagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 2130804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 15774431 - 15774250
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |        ||| |||||||||||||| ||| ||||||||||||    
T  15774431 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 15774332  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| ||||||||||||||||| ||| ||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  15774331 tatcgggaccatggctgagggcaggtaggtatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 15774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 29836198 - 29836023
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  29836198 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 29836099  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  29836098 ccatggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagacccgactggggaaaacgccgtt 29836023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 22074267 - 22074429
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |        ||| ||||||||||| |||||| ||||||||||||    
T  22074267 gcagagacagacaagacattggaatattgggcacgtagtggctcgtgctatatcacacattcttggaaatcctctttggatataacgtcgttgggagacg 22074366  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||| ||||||||||||||||| ||||||  |||||||||||||||||||||| |||||||    
T  22074367 tatcgggaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagac 22074429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 22139771 - 22139595
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||| |||||||||||     
T  22139771 gcagagacagacaagacactggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 22139672  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||| ||||||| ||||||| | |||||||||||    
T  22139671 tatcggaaccatgactgagggcaggtagctatacaacttgctggggacagaatctcggaagactctactggggataa 22139595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 18797566 - 18797404
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  18797566 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 18797467  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||||| ||||||  |||||||||  |||||||||||||| ||||    
T  18797466 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagac 18797404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 185
Target Start/End: Complemental strand, 33249220 - 33249039
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  33249220 gcagagacaaacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 33249121  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| |||| |||||||||| | ||||||  |||||||||||||||||||||||||||||| | |||||| |||| ||||    
T  33249120 tatcgggaccaaggctgagggccggtagctatgcaacttgctggggatagaatcttggaagactctactgggaataatgccg 33249039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 180
Target Start/End: Complemental strand, 14570012 - 14569836
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| |        || | ||| |||||||||||||| ||| ||||||||||||    
T  14570012 gcagagacagacaagacattggagtattgggcacacagtggctcgtgctatactacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14569913  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || ||||||||||||||||||||| ||||||  ||||| |||||||||||||||| ||||||| | |||||| ||||    
T  14569912 tatcggaaccatggctgagggcaggtagctatgcaactcgctggggatagaatctcggaagactctactgggaataa 14569836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 16260795 - 16260613
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||||||| |||||||||||     
T  16260795 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 16260696  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||| | | |||||| |||| |||||    
T  16260695 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactgggaataatgccgt 16260613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 19654681 - 19654863
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||||||| |||||||||||     
T  19654681 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagact 19654780  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || |||||||||| |||||||||| ||||||  |||||||||||||||||||||| ||||| | | |||||| |||| |||||    
T  19654781 tatcggaaccatgactgagggcaggtagctatgcaacttgctggggatagaatctcggaaggctctactgggaataatgccgt 19654863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 186
Target Start/End: Complemental strand, 19694973 - 19694791
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||| || || | |        ||| |||||||||||||| ||| ||||| ||||||    
T  19694973 gcagagacagacaagacactggagtattgggcacgtaatggctcgtgttatattacacattcctggaaatcctctttggagatgacgtcgttgagagacg 19694874  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| |||||    
T  19694873 tatcggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccgt 19694791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 21341525 - 21341702
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  21341525 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 21341624  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataa 180  Q
    |  ||||||||||||||||||||| ||||||  |||||||| || ||||||||||| ||||||| | |||||| ||||    
T  21341625 tgtcggaaccatggctgagggcaggtagctatgcaacttgcttgaggatagaatctcggaagactctactgggaataa 21341702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 28355299 - 28355474
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  28355299 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 28355398  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  28355399 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 28355474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 18716331 - 18716177
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  18716331 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 18716232  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||    
T  18716231 ccatggctgagggcaggtagctatgcaacttgctggggatagaatcttgggagac 18716177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 31483218 - 31483393
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  31483218 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 31483317  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||| ||||||| ||||||||||||||||||   |||||||| |||||||||    
T  31483318 ccatagctgagggcaggtagatatgcaatttgctggagatagaatcttggaagactttactggggaaaacgccgtt 31483393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 33265595 - 33265420
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| ||||||||||| || ||| ||||||||||||||  ||||    
T  33265595 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggaaatgacgtcgttgggagacgtattggaa 33265496  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||||  ||||   |||||||| |||||||||    
T  33265495 ccatggctgagggcaggtaggtatgcaacttgctggggatagaatcttgagagactttactggggaaaacgccgtt 33265420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 190
Target Start/End: Original strand, 12086075 - 12086253
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  12086075 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 12086174  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatg 190  Q
    |||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||| ||||||||||||    
T  12086175 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatg 12086253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 158
Target Start/End: Original strand, 19910522 - 19910676
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  19910522 gcagagacagacaagacactggagtattgggcacacagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 19910621  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatct 158  Q
    || ||| ||||||||||||||||| ||||||  |||||||||| |||||||||||    
T  19910622 tatcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatct 19910676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 27602268 - 27602449
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||| |||||| |||||||||  ||||||||||||| || | |        ||| |||||||||||| | ||| ||||||||||||    
T  27602268 gcagagacagacaagacactggagtgttgggcacgcggtggctcgtgctatattacacattcttggaaatcctctttggagctgacgtcgttgggagacg 27602367  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||||||||||||||||||||| ||||||  |||||||||  |||||||||||||| |||| | |||||| |||| ||||    
T  27602368 tatcggaaccatggctgagggcaggtagctatgcaacttgctaaggatagaatcttgggagactctactgggaataatgccg 27602449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 31361404 - 31361267
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  31361404 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattctcggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 31361305  T
Q  112 ccatggctgagggcagatagctaatcaacttgctgggg 149  Q
    |||||||||||||||| ||| ||  |||||||||||||    
T  31361304 ccatggctgagggcaggtaggtatgcaacttgctgggg 31361267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 19201730 - 19201906
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  19201730 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 19201829  T
Q  112 ccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||  ||||||||||| || |||| |||||||| ||||||||||||||||  |||| | || ||||| |||||||||    
T  19201830 ccacagctgagggcaggtaactaaacaacttgcttggggatagaatcttgagagactccaccggggaaaacgccgtt 19201906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 44567794 - 44567680
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||  ||||||||||||||||| ||| ||||||  |||||||||||  |||||||||||||||||   |||    
T  44567794 tcctctttggagatgacgtcgttgggagacgtttcggaaccatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttact 44567695  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  44567694 ggggaaaacgccgtt 44567680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 19681270 - 19681156
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||| |||| ||| ||||||||||||  || ||  ||||||||||| ||||||||||||||||||   |||    
T  19681270 tcctctttggagatgacgtcgttgggagacgtatcggagccaaggctgagggcaggcaggtatgcaacttgctggagatagaatcttggaagactttact 19681171  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  19681170 ggggaaaacgccgtt 19681156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 9361478 - 9361304
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| |        || |  || |||||||||||||| ||| ||||||| |||||| ||| |    
T  9361478 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttgaaaatcctctttggagatgacgtcgttgggggacgtatcgg-a 9361380  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||| | ||| ||   |||| |||||||||||| |||||  |||| | || ||||| |||||||||    
T  9361379 ccatagctgagggccggtaggtatgtaactggctggggatagagtcttgagagactccaccggggaaaacgccgtt 9361304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 15775329 - 15775288
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta 61  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  15775329 agacaagacattagagtattgggcacgtggtggctcgtgcta 15775288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 16201407 - 16201583
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| || | |        ||| ||||||||||||||||| |||||||||||||    
T  16201407 gcagagacagacaagacattggagtattgggcacgtagtggctcatgctatattacacattcctggaaatcctctttggagataacaccgttgggagacg 16201506  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || |||||||||| |||||||||| ||||||  ||||||||||||| |||||||| ||||||| | |||||||||||    
T  16201507 tatcggaaccatgactgagggcaggtagctatgcaacttgctgggggtagaatctcggaagactctactggggataa 16201583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 20333793 - 20333969
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  20333793 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagataacgtcgttgggagacg 20333892  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataa 180  Q
    || |||||||||||| |||||||| ||||||  ||||||||||||||||||||||  |||||| |  ||||||||||    
T  20333893 tatcggaaccatggccgagggcaggtagctatgcaacttgctggggatagaatctcagaagactctgctggggataa 20333969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 14692293 - 14692474
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  14692293 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14692392  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  |||||||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  14692393 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14692474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 14694975 - 14695156
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  14694975 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14695074  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  |||||||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  14695075 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14695156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 14697659 - 14697840
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  14697659 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14697758  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |  |||||||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  14697759 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 14697840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 14700340 - 14700511
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  14700340 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacg 14700439  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggg 175  Q
    |  |||||||||||||||| |||| ||||||  |||||||||||||||||||||| || |||| | ||||||    
T  14700440 tgtcggaaccatggctgagagcaggtagctatgcaacttgctggggatagaatctcgggagactctactggg 14700511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 186
Target Start/End: Original strand, 21891126 - 21891308
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||| || | |        ||| |||||||||||||| ||| ||||||||||||    
T  21891126 gcagagacatacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacg 21891225  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    || ||||||||||||||||||||| ||||||  || ||||||||||||||||||| ||||||| | |||||| |||| |||||    
T  21891226 tatcggaaccatggctgagggcaggtagctatgcatcttgctggggatagaatctcggaagactctactgggaataatgccgt 21891308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 20467664 - 20467484
Alignment:
Q  14 agagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgta 105  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||| || | |        ||| |||||||||||||||||| ||||||||||| ||    
T  20467664 agagacagacaaggcattggagtattggccacgtagtggctcgtgctatattacacattcctggaaatcctctttggagataacgtcgttgggagacata 20467565  T
Q  106 ccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
     |||||||||||||||||| || ||||||   ||||||||||||||||||||| ||||||| |  |||||||||| |||||    
T  20467564 tcggaaccatggctgagggtaggtagctatgtaacttgctggggatagaatctcggaagactctgctggggataatgccgt 20467484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 51645096 - 51644921
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| ||||||||| |||| ||| |||||||||||||| |||||    
T  51645096 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttgaagatgacgtcgttgggagacgtatcggaa 51644997  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||||||  ||||||||||| ||||||||||||||||||   |||||||| |||||||||    
T  51644996 ccatggctgagggcaggtagctatgcaacttgctggagatagaatcttggaagactttactggggaaaacgccgtt 51644921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 10951966 - 10951791
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  10951966 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 10951867  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||| |||||||||||| ||||||| ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  10951866 ccacggctgagggcaggtagctaaacaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 10951791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 10969517 - 10969344
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||| ||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  10969517 agacaagacattagagtattgggcacgtagtgactcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 10969418  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    |||||||||||||||| ||| ||  | ||||||||||||||||||||||  ||||   ||||||||||| ||||    
T  10969417 ccatggctgagggcaggtaggtatgccacttgctggggatagaatcttgagagactttactggggataatgccg 10969344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 3648021 - 3647846
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgcta-------catcatagaag-tcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| |||||||||||||||||||||||||||||       |||  | | || |||||| ||||||| ||| |||||||||||||| |||||    
T  3648021 agacaagacattagagtattgggcacgtagtggctcgtgctatgttacacattctcggagatcctctatggagatgacgtcgttgggagacgtatcggaa 3647922  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||||||||||||| ||| ||   ||||||||||||||||| |||||  |||| | || ||||| |||||||||    
T  3647921 ccatggctgagggcaggtaggtatgtaacttgctggggatagagtcttgagagactccaccggggaaaacgccgtt 3647846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 185
Target Start/End: Original strand, 41786718 - 41786891
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    ||||||||| |  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  41786718 agacaagacgtcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 41786817  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||| ||||||||||||  || ||  ||||||||||| |||||||||||| |||||   ||||||||||| ||||    
T  41786818 ccacggctgagggcaggcaggtatgcaacttgctggagatagaatcttgaaagactttactggggataatgccg 41786891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 28591955 - 28591780
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  28591955 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 28591856  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||| |||||| | ||| ||   |||||||| |||||||| |||||  |||| | |||||||| |||||||||    
T  28591855 ccatggccgagggctggtaggtatgtaacttgctagggatagagtcttgagagactccactggggaaaacgccgtt 28591780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 28156579 - 28156425
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  28156579 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtttcggga 28156480  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||  |||||||||| | ||||||  ||||||||||||||||||||||||| ||||    
T  28156479 cctaggctgagggccggtagctatgcaacttgctggggatagaatcttgggagac 28156425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 28169 - 27992
Alignment:
Q  15 gagacagacaagacattggagtattgggcacgtagtggctcgtgcta-----cat-catagaagtcctctttggagataacgccgttgggagacgtaccg 108  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||     ||| | | ||| |||||||||||||||||| |||||||||||||| ||    
T  28169 gagacagacaagacattggagtattgggcacgtagtggctcgttatatcacacattcttggaaatcctctttggagataacgtcgttgggagacgtatcg 28070  T
Q  109 gaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgt 186  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||||||| ||||||| |  |||||||||| |||||    
T  28069 gaaccatggctgagggcaggtagctatataacttgctggggatagaatctcggaagactccgctggggataatgccgt 27992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 652 - 467
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| || | |        ||| |||||||||||||||||| ||||||||||||    
T  652 gcagagacagacaagacattggagtattgggcacgtagtgtctcgtgctatattacacattcccggaaatcctctttggagataacgtcgttgggagacg 553  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttat 189  Q
    || | ||||||||| ||||||||| ||||||  |||| ||||||||||||||||| ||||||| |  |||||||||| ||||||||    
T  552 tatcagaaccatggttgagggcaggtagctatgcaacctgctggggatagaatctcggaagactctgctggggataatgccgttat 467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 25946 - 26108
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||| |||| |||||||| |||||||||||||||||||| ||||| |||| |        ||| |||||||||||||||||| ||||||||||||    
T  25946 gcagagacacacaaaacattggactattgggcacgtagtggctcatgctatatcacacattcttggaaatcctctttggagataacgtcgttgggagacg 26045  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || ||||||||||||||||||||| ||||||| |||||||||||||| ||||||| |||||||    
T  26046 tatcggaaccatggctgagggcaggtagctaagcaacttgctggggaaagaatctcggaagac 26108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 12931 - 12769
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacat--------catagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||        | | ||| |||||||||||||||||| ||||||||||||    
T  12931 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacattacacatccctggaaatcctctttggagataacgtcgttgggagacg 12832  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    || |||||||| ||| |||||||| ||||||   |||||| || ||||||||||| |||||||    
T  12831 tatcggaaccacggccgagggcaggtagctatgaaacttgttgcggatagaatctcggaagac 12769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 2529 - 2354
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||| ||||||||||||||||||||||||| || | |        ||| |||||||||||||| |||  ||||||||||||  |||||    
T  2529 agacaagacattagagcattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgttgttgggagacgtgtcggaa 2430  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||  ||||||||||| ||| ||  ||||||||||| ||||||||||||||||||| ||||||||| || ||||||    
T  2429 ccaaagctgagggcaggtagatatacaacttgctggagatagaatcttggaagacctgactggggaaaatgccgtt 2354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 185
Target Start/End: Original strand, 24353 - 24531
Alignment:
Q  15 gagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtac 106  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| || | |        ||| | |||||||||||| ||| ||||||||||||||     
T  24353 gagacagacaagacactggagtattgggcacgtaatggctcgtgctatattacacattcctggaaattctctttggagatgacgtcgttgggagacgtat 24452  T
Q  107 cggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  24453 cggaaccatggctgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 24531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0792 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0792
Description:

Target: scaffold0792; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 3992 - 4173
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacg 103  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| || | |        ||  |||||||||||||| ||| ||||||||||||    
T  3992 gcagagacagacaagacattggagtattgggcacgcagtggctcgtgctatattacacattcttggacatcctctttggagatgacgtcgttgggagacg 4091  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    || ||| ||||||||| ||||||| ||||||  |||||||||||||||||||||| || |||| | |||||| |||| ||||    
T  4092 tatcgggaccatggctaagggcaggtagctatgcaacttgctggggatagaatctcgggagactctactgggaataatgccg 4173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0547 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0547
Description:

Target: scaffold0547; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 9037 - 9214
Alignment:
Q  12 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctaca--------tcatagaagtcctctttggagataacgccgttgggagacg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |        || | ||  |||||||||||||| ||| ||||||||||||    
T  9037 gcagagacagacaagacattggagtattgggcacgtagtggctcgtgctatattacacattcctggacatcctctttggagatgacgtcgttgggagacg 9136  T
Q  104 taccggaaccatggctgagggcagatagctaatcaacttgc-tggggatagaatcttggaagacccgactggggataa 180  Q
    |  ||||||||||||||||||||| |||| |  |||||||| || ||||||||||| ||||||| | |||||| ||||    
T  9137 tgtcggaaccatggctgagggcaggtagccatgcaacttgcttgaggatagaatctcggaagactctactgggaataa 9214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 68; Significance: 1e-30; HSPs: 2)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 13 - 185
Target Start/End: Complemental strand, 34151 - 33971
Alignment:
Q  13 cagagacagacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgt 104  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||    
T  34151 cagagacagacaagacactggagtgttgggcacgcagtggctcgtgctatattacacattcctggaaatcctctttggagatgacgtcgttgggagacgt 34052  T
Q  105 accggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    | ||| ||||||||||||||||| ||||||  |||||||||| ||||||||||| || |||| | |||||| |||| ||||    
T  34051 atcgggaccatggctgagggcaggtagctatgcaacttgctgaggatagaatctcgggagactctactgggaataatgccg 33971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 10791 - 10615
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata---------gaagtcctctttggagataacgccgttgggagacgtaccgga 110  Q
    |||||||||||| || |||||||||||||||||||||||||| || | |         ||| |||||||||||||| ||| |||||||||||||  ||||    
T  10791 agacaagacattagaatattgggcacgtagtggctcgtgctatattacacatttcttggaaatcctctttggagatgacgtcgttgggagacgtttcgga 10692  T
Q  111 accatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    ||||||||||||| ||| ||||||  |||||||||||  |||||||||||||||||   |||||||| |||||||||    
T  10691 accatggctgaggacaggtagctatgcaacttgctggaaatagaatcttggaagactttactggggaaaacgccgtt 10615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 14814 - 14636
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| |||||    
T  14814 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcggaa 14715  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgttatg 190  Q
    |||||||||||||||| ||||||  |||||||||||  || |||||| ||||| |   |||||||| ||||||||||||    
T  14714 ccatggctgagggcaggtagctatacaacttgctggaaattgaatctcggaaggctttactggggaaaacgccgttatg 14636  T

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Target: scaffold0237 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 166
Target Start/End: Original strand, 8325 - 8479
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||| | |||    
T  8325 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtatcagaa 8424  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagac 166  Q
    ||| |||||||||||| ||| ||  ||||||||||| ||||||||||||||||||    
T  8425 ccaaggctgagggcaggtaggtatgcaacttgctggagatagaatcttggaagac 8479  T

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Target: scaffold0159 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 2561 - 2736
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||  ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  |||||    
T  2561 agacaagacatcagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggaa 2660  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  2661 ccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 2736  T

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Target: scaffold0159; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 18582 - 18505
Alignment:
Q  110 aaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccgtt 187  Q
    |||||| ||||||||||| ||| ||  ||||||||||| ||||||||||||  || | | |||||||| |||||||||    
T  18582 aaccatagctgagggcaggtagatatgcaacttgctggagatagaatcttgagaggctccactggggaaaacgccgtt 18505  T

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Target: scaffold0099 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 40067 - 40181
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctga-gggcagatagctaat-caacttgctggggatagaatcttggaagacccga 170  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| ||| |||| |||||||||||||||||||||| ||||||| | |    
T  40067 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggctgaggggcaggtagttaatgcaacttgctggggatagaatctcggaagactcta 40166  T
Q  171 ctggggataacgccg 185  Q
    ||||| |||| ||||    
T  40167 ctgggaataatgccg 40181  T

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Target: scaffold0418 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 20 - 185
Target Start/End: Complemental strand, 12888 - 12715
Alignment:
Q  20 agacaagacattggagtattgggcacgtagtggctcgtgctacatcata--------gaagtcctctttggagataacgccgttgggagacgtaccggaa 111  Q
    |||||||||||| ||||||||||||||||||||||||||||| || | |        ||| |||||||||||||| ||| |||||||||||||  ||| |    
T  12888 agacaagacattagagtattgggcacgtagtggctcgtgctatattacacattcttggaaatcctctttggagatgacgtcgttgggagacgtgtcggga 12789  T
Q  112 ccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||  |||||||||| | ||||||  |||||||||||||||||| |||||| |||| | |||||| |||| ||||    
T  12788 cctaggctgagggccggtagctatgcaacttgctggggatagagtcttgggagactctactgggaataatgccg 12715  T

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Target: scaffold0336 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 16387 - 16273
Alignment:
Q  73 tcctctttggagataacgccgttgggagacgtaccggaaccatggctgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgact 172  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||| |||||| | ||| ||   |||| |||||||||||| |||||  |||| | ||     
T  16387 tcctctttggagatgacgtcgttgggagacgtatcggaaccatggccgagggccggtaggtatgtaactggctggggatagagtcttgagagactccacc 16288  T
Q  173 ggggataacgccgtt 187  Q
    ||||| |||||||||    
T  16287 ggggaaaacgccgtt 16273  T

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Target: scaffold0089 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 6807 - 6741
Alignment:
Q  119 tgagggcagatagctaatcaacttgctggggatagaatcttggaagacccgactggggataacgccg 185  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||||||| | |||||| |||| ||||    
T  6807 tgagggcaggtagctatgcaacttgctggggatagaatctcggaagactctactgggaataatgccg 6741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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