View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9051_low_11 (Length: 220)

Name: NF9051_low_11
Description: NF9051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9051_low_11
NF9051_low_11
[»] chr1 (38 HSPs)
chr1 (48-204)||(8275962-8276118)
chr1 (48-178)||(38056671-38056801)
chr1 (1-87)||(44822110-44822196)
chr1 (69-178)||(28476733-28476842)
chr1 (1-87)||(24723440-24723526)
chr1 (6-87)||(7052011-7052092)
chr1 (94-178)||(50544841-50544925)
chr1 (87-179)||(24719509-24719600)
chr1 (87-178)||(12710829-12710920)
chr1 (91-177)||(22145666-22145752)
chr1 (87-178)||(24007224-24007315)
chr1 (114-178)||(17901793-17901857)
chr1 (101-178)||(6834152-6834229)
chr1 (87-178)||(39061283-39061373)
chr1 (114-178)||(34392757-34392821)
chr1 (117-178)||(635003-635064)
chr1 (114-178)||(8306595-8306659)
chr1 (114-178)||(35895088-35895152)
chr1 (40-86)||(51324420-51324466)
chr1 (114-178)||(45499531-45499595)
chr1 (87-178)||(21188033-21188123)
chr1 (48-89)||(4595933-4595974)
chr1 (52-177)||(19676639-19676763)
chr1 (40-87)||(7320683-7320730)
chr1 (139-178)||(7703136-7703175)
chr1 (52-87)||(20633723-20633758)
chr1 (87-178)||(20708058-20708148)
chr1 (87-129)||(40390112-40390155)
chr1 (97-135)||(14792604-14792642)
chr1 (123-177)||(20588636-20588690)
chr1 (123-177)||(20593174-20593228)
chr1 (97-135)||(21243799-21243837)
chr1 (87-135)||(18121565-18121614)
chr1 (87-135)||(38887128-38887177)
chr1 (125-178)||(42913049-42913102)
chr1 (114-178)||(12327742-12327806)
chr1 (125-177)||(21046049-21046101)
chr1 (114-178)||(51336468-51336532)
[»] chr7 (58 HSPs)
chr7 (6-178)||(708428-708600)
chr7 (71-178)||(19195558-19195664)
chr7 (1-86)||(14274209-14274294)
chr7 (87-179)||(43745618-43745710)
chr7 (2-190)||(47974807-47974994)
chr7 (69-178)||(15575648-15575757)
chr7 (89-190)||(8513740-8513842)
chr7 (69-178)||(20252181-20252290)
chr7 (87-178)||(47095414-47095505)
chr7 (89-190)||(8488081-8488183)
chr7 (69-179)||(4690661-4690771)
chr7 (69-178)||(18874664-18874772)
chr7 (115-178)||(38299738-38299801)
chr7 (87-177)||(43276744-43276834)
chr7 (69-179)||(48212725-48212837)
chr7 (114-178)||(16250221-16250285)
chr7 (99-163)||(34958319-34958383)
chr7 (114-178)||(58412-58476)
chr7 (114-178)||(13315081-13315145)
chr7 (69-140)||(16186857-16186928)
chr7 (124-178)||(3287743-3287797)
chr7 (87-137)||(42565872-42565922)
chr7 (120-177)||(19283051-19283108)
chr7 (114-178)||(13744509-13744573)
chr7 (109-173)||(15700887-15700951)
chr7 (40-87)||(15095726-15095773)
chr7 (40-87)||(15140129-15140176)
chr7 (87-178)||(15700734-15700824)
chr7 (114-177)||(25943256-25943319)
chr7 (52-178)||(12127162-12127287)
chr7 (41-87)||(33002078-33002124)
chr7 (87-135)||(9743120-9743169)
chr7 (41-82)||(17070384-17070425)
chr7 (99-163)||(831864-831928)
chr7 (99-163)||(1197044-1197108)
chr7 (47-87)||(8135326-8135366)
chr7 (114-178)||(8930764-8930828)
chr7 (114-178)||(18570636-18570700)
chr7 (86-178)||(21661218-21661309)
chr7 (52-87)||(12465349-12465384)
chr7 (48-87)||(13132410-13132449)
chr7 (52-87)||(13147561-13147596)
chr7 (87-129)||(15119354-15119397)
chr7 (52-87)||(20620214-20620249)
chr7 (125-187)||(20214147-20214209)
chr7 (88-178)||(33060402-33060491)
chr7 (52-177)||(8851159-8851283)
chr7 (54-87)||(13698728-13698761)
chr7 (87-135)||(14160897-14160946)
chr7 (125-178)||(14180397-14180450)
chr7 (87-135)||(14318034-14318083)
chr7 (125-178)||(20586352-20586405)
chr7 (125-177)||(11067468-11067520)
chr7 (125-177)||(12372274-12372326)
chr7 (125-177)||(12465260-12465312)
chr7 (52-88)||(16999361-16999397)
chr7 (125-177)||(32433589-32433641)
chr7 (124-188)||(35771430-35771494)
[»] chr4 (37 HSPs)
chr4 (48-178)||(9638933-9639063)
chr4 (69-178)||(14631079-14631188)
chr4 (87-178)||(16296900-16296991)
chr4 (69-178)||(25513795-25513904)
chr4 (1-87)||(14549637-14549723)
chr4 (71-171)||(35660902-35661002)
chr4 (69-179)||(26446151-26446261)
chr4 (87-177)||(33186864-33186955)
chr4 (87-177)||(12424290-12424383)
chr4 (87-179)||(2424385-2424477)
chr4 (111-178)||(15239815-15239882)
chr4 (117-188)||(13847193-13847264)
chr4 (4-57)||(19434668-19434721)
chr4 (99-163)||(15747787-15747851)
chr4 (99-160)||(17142996-17143057)
chr4 (87-178)||(14477594-14477684)
chr4 (87-178)||(18462986-18463076)
chr4 (114-178)||(9622478-9622542)
chr4 (114-178)||(10273372-10273436)
chr4 (114-178)||(55583185-55583249)
chr4 (52-178)||(37019598-37019723)
chr4 (87-135)||(12623278-12623327)
chr4 (87-135)||(19565959-19566008)
chr4 (87-135)||(45314124-45314173)
chr4 (88-135)||(26921550-26921598)
chr4 (52-87)||(16998453-16998488)
chr4 (52-87)||(25091581-25091616)
chr4 (52-87)||(53630563-53630598)
chr4 (125-178)||(15115222-15115275)
chr4 (159-196)||(19739772-19739809)
chr4 (159-196)||(27996825-27996862)
chr4 (102-135)||(46741177-46741210)
chr4 (125-177)||(11425943-11425995)
chr4 (125-177)||(19610324-19610376)
chr4 (125-177)||(25091653-25091705)
chr4 (125-177)||(42875797-42875849)
chr4 (125-177)||(53630474-53630526)
[»] scaffold0220 (2 HSPs)
scaffold0220 (48-196)||(13872-14019)
scaffold0220 (124-190)||(19953-20019)
[»] scaffold0328 (1 HSPs)
scaffold0328 (48-178)||(18639-18770)
[»] chr6 (37 HSPs)
chr6 (48-178)||(19825485-19825615)
chr6 (69-204)||(15998833-15998968)
chr6 (87-179)||(21683073-21683164)
chr6 (89-178)||(18982536-18982625)
chr6 (87-178)||(23658050-23658142)
chr6 (89-177)||(20410512-20410600)
chr6 (34-83)||(18585715-18585764)
chr6 (114-178)||(29045260-29045324)
chr6 (87-178)||(1818915-1819005)
chr6 (1-52)||(18585665-18585716)
chr6 (40-87)||(28948490-28948537)
chr6 (71-178)||(34140455-34140560)
chr6 (52-178)||(15890711-15890836)
chr6 (87-137)||(24506155-24506205)
chr6 (114-178)||(10446206-10446270)
chr6 (87-190)||(31734669-31734772)
chr6 (48-99)||(17318200-17318251)
chr6 (71-178)||(34153071-34153176)
chr6 (87-135)||(7217285-7217333)
chr6 (89-132)||(18982379-18982422)
chr6 (87-135)||(22557210-22557259)
chr6 (87-178)||(25921963-25922054)
chr6 (52-87)||(7827900-7827935)
chr6 (52-87)||(23150376-23150411)
chr6 (48-87)||(23501595-23501634)
chr6 (52-87)||(27330070-27330105)
chr6 (52-87)||(27390810-27390845)
chr6 (100-178)||(13285723-13285801)
chr6 (159-196)||(16966800-16966837)
chr6 (159-196)||(18259155-18259192)
chr6 (52-177)||(19655231-19655355)
chr6 (159-196)||(20183754-20183791)
chr6 (159-196)||(22152200-22152237)
chr6 (87-135)||(23431488-23431537)
chr6 (125-177)||(7827972-7828024)
chr6 (124-188)||(12041609-12041673)
chr6 (125-177)||(23150287-23150339)
[»] chr3 (55 HSPs)
chr3 (48-178)||(14641547-14641677)
chr3 (69-178)||(17208468-17208577)
chr3 (102-190)||(14152386-14152474)
chr3 (87-178)||(14520408-14520499)
chr3 (89-178)||(29907603-29907692)
chr3 (89-178)||(29948769-29948858)
chr3 (89-178)||(29997923-29998012)
chr3 (87-177)||(5215608-5215699)
chr3 (88-178)||(15566706-15566797)
chr3 (114-178)||(22841278-22841342)
chr3 (101-170)||(45803338-45803407)
chr3 (99-163)||(2247880-2247944)
chr3 (71-178)||(3160626-3160732)
chr3 (72-178)||(21845651-21845756)
chr3 (114-178)||(2841505-2841569)
chr3 (40-87)||(9511005-9511052)
chr3 (40-87)||(9518980-9519027)
chr3 (114-177)||(54875474-54875537)
chr3 (68-190)||(16050871-16050992)
chr3 (87-137)||(48631294-48631344)
chr3 (101-178)||(12917305-12917382)
chr3 (114-178)||(3527156-3527220)
chr3 (114-178)||(6156700-6156763)
chr3 (114-178)||(6159394-6159458)
chr3 (87-188)||(17684824-17684926)
chr3 (115-179)||(24548952-24549016)
chr3 (6-44)||(13522391-13522429)
chr3 (71-116)||(13520404-13520449)
chr3 (42-87)||(49968948-49968993)
chr3 (87-135)||(53646100-53646149)
chr3 (87-135)||(54330348-54330397)
chr3 (114-178)||(14442164-14442228)
chr3 (125-177)||(17539106-17539158)
chr3 (87-178)||(6003148-6003238)
chr3 (52-87)||(10563636-10563671)
chr3 (52-87)||(17044894-17044929)
chr3 (52-87)||(17518962-17518997)
chr3 (52-87)||(17533824-17533859)
chr3 (52-87)||(40807924-40807959)
chr3 (52-87)||(49900658-49900693)
chr3 (52-87)||(50348115-50348150)
chr3 (87-178)||(50350815-50350908)
chr3 (41-87)||(19568297-19568343)
chr3 (124-178)||(33565086-33565140)
chr3 (54-87)||(11563654-11563687)
chr3 (125-178)||(24177735-24177788)
chr3 (114-179)||(24547189-24547254)
chr3 (125-178)||(40807996-40808049)
chr3 (125-178)||(44274418-44274471)
chr3 (125-177)||(11259431-11259483)
chr3 (125-177)||(17044966-17045018)
chr3 (125-177)||(17047126-17047178)
chr3 (125-177)||(17541434-17541486)
chr3 (125-177)||(22306583-22306635)
chr3 (52-84)||(41172463-41172495)
[»] chr5 (23 HSPs)
chr5 (1-86)||(30138064-30138149)
chr5 (1-87)||(31456837-31456923)
chr5 (71-178)||(16063697-16063804)
chr5 (2-177)||(36508633-36508807)
chr5 (1-87)||(17876081-17876166)
chr5 (69-178)||(18744818-18744927)
chr5 (69-177)||(23199207-23199315)
chr5 (71-178)||(6551289-6551396)
chr5 (87-179)||(660752-660842)
chr5 (69-173)||(1627071-1627176)
chr5 (87-190)||(26762364-26762467)
chr5 (114-178)||(32607315-32607379)
chr5 (87-179)||(1626916-1627008)
chr5 (87-135)||(14025848-14025897)
chr5 (87-179)||(26749993-26750085)
chr5 (159-214)||(21914455-21914510)
chr5 (87-129)||(24068191-24068234)
chr5 (124-178)||(21398643-21398697)
chr5 (87-135)||(8833247-8833296)
chr5 (101-178)||(20313253-20313328)
chr5 (52-85)||(20566482-20566515)
chr5 (125-178)||(21300043-21300096)
chr5 (87-132)||(21504102-21504147)
[»] chr8 (38 HSPs)
chr8 (71-179)||(36732410-36732518)
chr8 (69-177)||(18816295-18816403)
chr8 (69-177)||(21514635-21514743)
chr8 (87-178)||(22208230-22208322)
chr8 (69-179)||(4380615-4380725)
chr8 (87-177)||(22258306-22258397)
chr8 (87-178)||(12577841-12577932)
chr8 (71-178)||(21676592-21676697)
chr8 (72-178)||(21678845-21678949)
chr8 (90-178)||(21676499-21676585)
chr8 (114-173)||(22483775-22483834)
chr8 (99-163)||(18023570-18023634)
chr8 (114-178)||(21399706-21399770)
chr8 (114-178)||(21794199-21794263)
chr8 (114-178)||(22345153-22345217)
chr8 (114-178)||(22356813-22356877)
chr8 (114-178)||(22610266-22610330)
chr8 (99-163)||(38184926-38184990)
chr8 (101-163)||(22483914-22483976)
chr8 (48-89)||(20022120-20022161)
chr8 (38-87)||(22318000-22318049)
chr8 (87-177)||(21579206-21579296)
chr8 (115-178)||(36305988-36306050)
chr8 (40-86)||(22532222-22532268)
chr8 (40-86)||(22536907-22536953)
chr8 (87-135)||(12037205-12037254)
chr8 (125-190)||(17906836-17906901)
chr8 (52-177)||(20083638-20083762)
chr8 (87-135)||(22474718-22474767)
chr8 (87-135)||(29762909-29762958)
chr8 (52-87)||(5082301-5082336)
chr8 (114-177)||(18834412-18834474)
chr8 (52-87)||(19140693-19140728)
chr8 (87-129)||(22966772-22966815)
chr8 (125-188)||(39694266-39694329)
chr8 (48-87)||(45469309-45469348)
chr8 (87-135)||(17978457-17978506)
chr8 (87-135)||(41680174-41680223)
[»] chr2 (31 HSPs)
chr2 (1-87)||(357758-357844)
chr2 (1-87)||(1383632-1383718)
chr2 (5-87)||(24884351-24884433)
chr2 (87-178)||(21315475-21315566)
chr2 (87-178)||(21335265-21335356)
chr2 (1-81)||(22501846-22501926)
chr2 (1-81)||(22509780-22509860)
chr2 (69-179)||(23610570-23610680)
chr2 (69-178)||(21369237-21369346)
chr2 (87-137)||(25584302-25584352)
chr2 (114-178)||(23801485-23801549)
chr2 (123-178)||(149500-149555)
chr2 (90-137)||(19647199-19647246)
chr2 (87-178)||(20005970-20006060)
chr2 (101-178)||(34491239-34491316)
chr2 (114-178)||(28344987-28345051)
chr2 (69-135)||(28652593-28652660)
chr2 (52-178)||(24516114-24516239)
chr2 (54-87)||(25142133-25142166)
chr2 (98-178)||(45535899-45535978)
chr2 (48-87)||(3539760-3539799)
chr2 (52-87)||(5031218-5031253)
chr2 (52-87)||(9975857-9975892)
chr2 (52-87)||(17307414-17307449)
chr2 (52-87)||(19201289-19201324)
chr2 (52-87)||(22251537-22251572)
chr2 (52-87)||(24780929-24780964)
chr2 (125-178)||(17307486-17307539)
chr2 (125-178)||(40912320-40912373)
chr2 (125-177)||(5031129-5031181)
chr2 (125-177)||(24780840-24780892)
[»] scaffold0676 (1 HSPs)
scaffold0676 (71-178)||(2827-2934)
[»] scaffold1186 (1 HSPs)
scaffold1186 (69-178)||(1964-2073)
[»] scaffold0338 (2 HSPs)
scaffold0338 (1-86)||(114-199)
scaffold0338 (159-192)||(10747-10780)
[»] scaffold0005 (1 HSPs)
scaffold0005 (69-178)||(186195-186304)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-83)||(6778-6860)
[»] scaffold0156 (1 HSPs)
scaffold0156 (5-87)||(16485-16567)
[»] scaffold0056 (1 HSPs)
scaffold0056 (69-179)||(18219-18329)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-87)||(106140-106226)
[»] scaffold0149 (2 HSPs)
scaffold0149 (2-87)||(21489-21574)
scaffold0149 (53-87)||(29662-29696)
[»] scaffold0878 (1 HSPs)
scaffold0878 (87-178)||(3421-3512)
[»] scaffold0247 (1 HSPs)
scaffold0247 (85-177)||(1036-1128)
[»] scaffold0061 (2 HSPs)
scaffold0061 (89-178)||(14585-14674)
scaffold0061 (89-178)||(23643-23732)
[»] scaffold0007 (3 HSPs)
scaffold0007 (89-178)||(16418-16507)
scaffold0007 (101-178)||(18700-18777)
scaffold0007 (89-132)||(18902-18945)
[»] scaffold0231 (1 HSPs)
scaffold0231 (87-178)||(17520-17611)
[»] scaffold0203 (1 HSPs)
scaffold0203 (69-178)||(17939-18048)
[»] scaffold0505 (1 HSPs)
scaffold0505 (87-177)||(4898-4988)
[»] scaffold1256 (1 HSPs)
scaffold1256 (90-179)||(2198-2287)
[»] scaffold0516 (1 HSPs)
scaffold0516 (87-179)||(5303-5395)
[»] scaffold0853 (1 HSPs)
scaffold0853 (69-177)||(2454-2564)
[»] scaffold0213 (2 HSPs)
scaffold0213 (87-178)||(19169-19260)
scaffold0213 (87-124)||(19123-19160)
[»] scaffold0431 (1 HSPs)
scaffold0431 (87-177)||(5592-5685)
[»] scaffold0369 (1 HSPs)
scaffold0369 (69-178)||(15615-15723)
[»] scaffold0108 (1 HSPs)
scaffold0108 (97-178)||(6390-6471)
[»] scaffold0032 (2 HSPs)
scaffold0032 (87-178)||(61847-61937)
scaffold0032 (159-204)||(68331-68376)
[»] scaffold0174 (4 HSPs)
scaffold0174 (116-178)||(5445-5507)
scaffold0174 (101-177)||(11592-11668)
scaffold0174 (114-178)||(19845-19909)
scaffold0174 (52-87)||(11318-11353)
[»] scaffold0594 (1 HSPs)
scaffold0594 (101-178)||(2223-2300)
[»] scaffold1766 (1 HSPs)
scaffold1766 (52-204)||(669-820)
[»] scaffold0092 (1 HSPs)
scaffold0092 (87-178)||(38441-38531)
[»] scaffold0058 (1 HSPs)
scaffold0058 (71-178)||(59655-59761)
[»] scaffold0020 (3 HSPs)
scaffold0020 (125-204)||(168972-169051)
scaffold0020 (87-190)||(174183-174286)
scaffold0020 (125-177)||(143611-143663)
[»] scaffold0139 (2 HSPs)
scaffold0139 (87-178)||(40160-40253)
scaffold0139 (94-178)||(23503-23587)
[»] scaffold0004 (5 HSPs)
scaffold0004 (101-178)||(66071-66148)
scaffold0004 (109-190)||(111344-111425)
scaffold0004 (114-177)||(73076-73139)
scaffold0004 (114-178)||(75926-75990)
scaffold0004 (52-87)||(328379-328414)
[»] scaffold0298 (1 HSPs)
scaffold0298 (99-163)||(359-423)
[»] scaffold0337 (1 HSPs)
scaffold0337 (87-178)||(3167-3257)
[»] scaffold0017 (2 HSPs)
scaffold0017 (87-174)||(26689-26776)
scaffold0017 (87-178)||(23576-23666)
[»] scaffold0439 (2 HSPs)
scaffold0439 (6-47)||(12212-12253)
scaffold0439 (87-179)||(4383-4475)
[»] scaffold0086 (1 HSPs)
scaffold0086 (101-178)||(35185-35262)
[»] scaffold0180 (1 HSPs)
scaffold0180 (99-163)||(10570-10633)
[»] scaffold0076 (1 HSPs)
scaffold0076 (157-213)||(22463-22519)
[»] scaffold0394 (1 HSPs)
scaffold0394 (87-178)||(7513-7603)
[»] scaffold0037 (3 HSPs)
scaffold0037 (51-88)||(117889-117926)
scaffold0037 (51-87)||(113057-113093)
scaffold0037 (58-87)||(81501-81530)
[»] scaffold0371 (1 HSPs)
scaffold0371 (87-190)||(10433-10536)
[»] scaffold0031 (1 HSPs)
scaffold0031 (114-178)||(127342-127406)
[»] scaffold0379 (1 HSPs)
scaffold0379 (114-177)||(10937-10999)
[»] scaffold0125 (1 HSPs)
scaffold0125 (87-137)||(28513-28564)
[»] scaffold0021 (2 HSPs)
scaffold0021 (94-137)||(17075-17118)
scaffold0021 (94-137)||(26606-26649)
[»] scaffold1941 (1 HSPs)
scaffold1941 (52-178)||(66-191)
[»] scaffold0555 (1 HSPs)
scaffold0555 (112-178)||(8745-8811)
[»] scaffold0217 (1 HSPs)
scaffold0217 (75-137)||(28664-28726)
[»] scaffold0162 (1 HSPs)
scaffold0162 (69-127)||(23932-23990)
[»] scaffold0148 (1 HSPs)
scaffold0148 (124-178)||(8843-8897)
[»] scaffold0083 (2 HSPs)
scaffold0083 (41-87)||(10842-10888)
scaffold0083 (55-87)||(5124-5156)
[»] scaffold0848 (1 HSPs)
scaffold0848 (42-87)||(2110-2155)
[»] scaffold0385 (1 HSPs)
scaffold0385 (87-135)||(307-356)
[»] scaffold0001 (4 HSPs)
scaffold0001 (52-177)||(31922-32046)
scaffold0001 (52-177)||(37229-37353)
scaffold0001 (125-178)||(77687-77740)
scaffold0001 (159-196)||(499092-499129)
[»] scaffold0098 (1 HSPs)
scaffold0098 (114-178)||(40096-40160)
[»] scaffold0048 (1 HSPs)
scaffold0048 (114-178)||(68725-68789)
[»] scaffold0035 (1 HSPs)
scaffold0035 (114-178)||(43786-43848)
[»] scaffold1800 (1 HSPs)
scaffold1800 (87-178)||(570-660)
[»] scaffold1633 (2 HSPs)
scaffold1633 (52-87)||(1133-1168)
scaffold1633 (125-177)||(1205-1257)
[»] scaffold1283 (2 HSPs)
scaffold1283 (52-87)||(557-592)
scaffold1283 (125-177)||(468-520)
[»] scaffold0737 (1 HSPs)
scaffold0737 (52-87)||(4803-4838)
[»] scaffold0632 (2 HSPs)
scaffold0632 (52-87)||(1093-1128)
scaffold0632 (125-178)||(1165-1218)
[»] scaffold0241 (2 HSPs)
scaffold0241 (52-87)||(2492-2527)
scaffold0241 (52-87)||(3110-3145)
[»] scaffold0165 (1 HSPs)
scaffold0165 (87-178)||(31892-31982)
[»] scaffold0145 (1 HSPs)
scaffold0145 (87-129)||(8086-8129)
[»] scaffold0120 (1 HSPs)
scaffold0120 (87-129)||(29273-29316)
[»] scaffold0111 (1 HSPs)
scaffold0111 (52-87)||(12622-12657)
[»] scaffold0080 (1 HSPs)
scaffold0080 (52-87)||(21882-21917)
[»] scaffold0059 (1 HSPs)
scaffold0059 (87-178)||(49692-49782)
[»] scaffold0462 (2 HSPs)
scaffold0462 (87-121)||(1279-1313)
scaffold0462 (87-121)||(6785-6819)
[»] scaffold1939 (1 HSPs)
scaffold1939 (87-132)||(90-135)
[»] scaffold0630 (1 HSPs)
scaffold0630 (87-135)||(9025-9074)
[»] scaffold0261 (1 HSPs)
scaffold0261 (87-127)||(6468-6509)
[»] scaffold0205 (1 HSPs)
scaffold0205 (101-178)||(5615-5690)
[»] scaffold0175 (1 HSPs)
scaffold0175 (40-81)||(8557-8598)
[»] scaffold0113 (1 HSPs)
scaffold0113 (125-178)||(35490-35543)
[»] scaffold0065 (1 HSPs)
scaffold0065 (159-196)||(55975-56012)
[»] scaffold0063 (1 HSPs)
scaffold0063 (87-135)||(62680-62729)
[»] scaffold0047 (2 HSPs)
scaffold0047 (52-85)||(78992-79025)
scaffold0047 (125-177)||(79049-79101)
[»] scaffold0859 (1 HSPs)
scaffold0859 (47-87)||(4605-4645)
[»] scaffold0121 (1 HSPs)
scaffold0121 (85-124)||(20159-20199)
[»] scaffold0036 (1 HSPs)
scaffold0036 (125-177)||(78185-78237)
[»] scaffold0019 (1 HSPs)
scaffold0019 (125-177)||(24131-24183)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 8276118 - 8275962
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 147  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8276118 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaaatatcaacaactacaaggttaaaccctttttcagaattataccactcatta 8276019  T
Q  148 ttagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctct 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8276018 ttagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctct 8275962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 38056801 - 38056671
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 147  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  38056801 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatta 38056702  T
Q  148 ttagataaagctagtcacacccttaccttag 178  Q
     |||| |||||||||| ||||||||||||||    
T  38056701 ctagagaaagctagtcccacccttaccttag 38056671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44822196 - 44822110
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44822196 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 44822110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 28476842 - 28476733
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||    
T  28476842 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaactcattattagagaaatctagtcccacc 28476743  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  28476742 cttaccttag 28476733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 24723526 - 24723440
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  24723526 caaccctaacttcattaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacataattctcaaa 24723440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 7052092 - 7052011
Alignment:
Q  6 ctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7052092 ctaacttctttaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaatttctaaacctaattcccaaa 7052011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 50544841 - 50544925
Alignment:
Q  94 aaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  50544841 aaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 50544925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 24719600 - 24719509
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||    
T  24719600 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtc-cacccttaccatagg 24719509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 12710829 - 12710920
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||||| || | |||||||||    
T  12710829 aacatcaaaactaacaacaactacaagattaaaccctttttcagaattatacaacccaatattagagaaagctagtcccatctttaccttag 12710920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 22145752 - 22145666
Alignment:
Q  91 tcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| ||||| |||||||||||||    
T  22145752 tcaaacctaacaacaactacaaggttaaaccctttttcagaattaaacaacccattattagagaaagttagtcccacccttacctta 22145666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 24007315 - 24007224
Alignment:
Q  87 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||||| ||| |||||||||| ||||||||||||||    
T  24007315 aacatcaaaactaacaacaactacaaaggttaaaccttttttcagaattatacaa-tcattatcagagaaagctagtcccacccttaccttag 24007224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 17901857 - 17901793
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  17901857 gttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 17901793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 6834152 - 6834229
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || | ||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||| ||||||    
T  6834152 caacaacaaccatgttaaaccctttttcagaattatacaactcattattagagaaagctagtatcacccttgccttag 6834229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 39061283 - 39061373
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| |||| | || | ||||| ||| ||||||||||    
T  39061283 aacatcaaaactatcaacaactacaaggttaaaccttttttcagaattata-tactcatgattacagaaggttagtcccactcttaccttag 39061373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 34392757 - 34392821
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  34392757 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttag 34392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 635064 - 635003
Alignment:
Q  117 aaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||| |||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  635064 aaacccttttttagaattatacaacctattattagagaaagctagtctcacccttaccttag 635003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 8306595 - 8306659
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||||||||||| |||||||||| |||||||||| ||| ||||||||||    
T  8306595 gttaaacccctttttagaattatacaacccattattagagaaagctagtcccactcttaccttag 8306659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 35895088 - 35895152
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||| ||||||||||||| ||||||| |||||||||||||||||||||  |||| ||||||||    
T  35895088 gttaaaacctttttcagaatcatacaacccattattagataaagctagtcctacccataccttag 35895152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 51324420 - 51324466
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaa 86  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  51324420 ttctactattaaaacaaccaattacaacttttaaacctaattcccaa 51324466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 45499531 - 45499595
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||  ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  45499531 gttaaacccctttatagaatcatacaacccattattagagaaagctagtctcacccttaccttag 45499595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 21188123 - 21188033
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||||||||  ||||| ||||| ||| |||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  21188123 aacatcaaaactatcaacaactacaaaattaaatcctttctcaaaattata-tactcatgattaaaaaaggttagtcccacccttaccttag 21188033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 4595974 - 4595933
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaac 89  Q
    ||||| ||||||||||||||||||||| ||||||||||||||    
T  4595974 ttaaatcaaccaattacaacttctaaatctaattcccaaaac 4595933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 19676639 - 19676763
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||||||||   ||| |||||  | | || || | | ||||| |  |||||||||||||||||| |  |||||    
T  19676639 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac-atgctaaactcaatttcagaattatacaacttagaattag 19676737  T
Q  152 ataaagctagtcacacccttacctta 177  Q
    | |||| ||||| |||||||||||||    
T  19676738 agaaagttagtcccacccttacctta 19676763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 7320730 - 7320683
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||| |||||| |||||||||||||| ||||||| |||||||||||    
T  7320730 ttctactattaaatcaaccaattacaacatctaaacataattcccaaa 7320683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 178
Target Start/End: Original strand, 7703136 - 7703175
Alignment:
Q  139 aactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  7703136 aactcattattagagaaagctagtcccacccttaccttag 7703175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 20633758 - 20633723
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20633758 aacaaccaattacaacttcaaaacctaattcccaaa 20633723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 20708148 - 20708058
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || ||||||||||  ||| ||||| |||||||||||||||||| |||||| | ||| | || | ||||| ||||||||||||||    
T  20708148 aacatcacaattatcaacaacatcaaagttaacccctttttcagaattatagaactca-tgttaaagaaggttagtcccacccttaccttag 20708058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 40390112 - 40390155
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 129  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  40390112 aacatcaaaacctattaacaactacaaggttaaaccctttttca 40390155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 14792642 - 14792604
Alignment:
Q  97 ctatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  14792642 ctattaacaactacaaggttaaaccctttttcaggatta 14792604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 20588636 - 20588690
Alignment:
Q  123 tttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||| ||||| ||||||| |||||||||| ||||||| || |||||||||||||    
T  20588636 ttttttagaatcatacaacccattattagagaaagctaatcccacccttacctta 20588690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 20593174 - 20593228
Alignment:
Q  123 tttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||| ||||| ||||||| |||||||||| ||||||| || |||||||||||||    
T  20593174 ttttttagaatcatacaacccattattagagaaagctaatcccacccttacctta 20593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 135
Target Start/End: Complemental strand, 21243837 - 21243799
Alignment:
Q  97 ctatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  21243837 ctattaacaactacaaggttaaaccctttttcaggatta 21243799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 18121565 - 18121614
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  18121565 aacatcaaaacctattaacaactacaaggttaaatcctttttcaggatta 18121614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 38887177 - 38887128
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||| ||||    
T  38887177 aacatcaaaacctattaacaactacaagattaaaccctttttcaggatta 38887128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 42913049 - 42913102
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  42913049 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 42913102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 12327806 - 12327742
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||| || |||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||    
T  12327806 gttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttag 12327742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 21046101 - 21046049
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  21046101 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 21046049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 51336468 - 51336532
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||| || |||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||    
T  51336468 gttaaatccattttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttag 51336532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 708600 - 708428
Alignment:
Q  6 ctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaaca 105  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| || ||    
T  708600 ctaacttctttaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcctataacatcaaaactaacagca 708501  T
Q  106 actacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| ||||||||    
T  708500 actacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccctaccttag 708428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 178
Target Start/End: Original strand, 19195558 - 19195664
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  19195558 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaaccctttt-cagaattatacaactcattattagagaaagctagtcccaccct 19195656  T
Q  171 taccttag 178  Q
    ||||||||    
T  19195657 taccttag 19195664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 14274209 - 14274294
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaa 86  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14274209 caaccctaacttcattaacaccttaattccaacaatcaattctacaattaaaacaacaaattacaacttctaaacctaattcccaa 14274294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 43745618 - 43745710
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  43745618 aacatcaaaactaacaacaactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtcccacccttaccttagg 43745710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 190
Target Start/End: Complemental strand, 47974994 - 47974807
Alignment:
Q  2 aaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatc 101  Q
    |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    ||||||||      
T  47974994 aaccctaacttcattagcatcttaatttcaacaatcaactctacaattaaaacaaccaattacaacttctaaacataattcccaaatttccaaaactaca 47974895  T
Q  102 aacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 190  Q
    | | || ||   |||||| ||  ||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  47974894 acctaccac-ctgttaaatccagtttcagaatcatacaacttagaattagagaaagttagtctcacccttaccttaggttaatcgatcg 47974807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 15575757 - 15575648
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  15575757 tctaaccctaatttctataacatcaaaactaacaacaagtacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacc 15575658  T
Q  169 cttaccttag 178  Q
    | ||||||||    
T  15575657 cctaccttag 15575648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 8513842 - 8513740
Alignment:
Q  89 catcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 187  Q
    ||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||||||    
T  8513842 catcaaaacctataaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcga 8513743  T
Q  188 tcg 190  Q
    |||    
T  8513742 tcg 8513740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 20252290 - 20252181
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  20252290 tctaatcctaatttctataacattaaaactaataacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcctacc 20252191  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  20252190 cttaccttag 20252181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 47095414 - 47095505
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  47095414 aacatcaaacctaacaacaactacaaggttaaaccatttttcagaattattcaacccattattagagaaagctagtcccacccttaccttag 47095505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 8488183 - 8488081
Alignment:
Q  89 catcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 187  Q
    ||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||||||    
T  8488183 catcaaaacctataaacaactataaggttaaacccttttttagaattatacaacccattattagagaaagttagtcccacccttaccttaggttaatcga 8488084  T
Q  188 tcg 190  Q
    |||    
T  8488083 tcg 8488081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 4690771 - 4690661
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  4690771 tctaaccctaatttctataacatcaaaagtaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacc 4690672  T
Q  169 cttaccttagg 179  Q
     ||||||||||    
T  4690671 tttaccttagg 4690661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 18874772 - 18874664
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcaca 166  Q
    ||||| ||||||| | | ||||||||||||| ||||   |||||||||||||||  ||||||||||||||||||| |||||||||| |||||||||| ||    
T  18874772 tctaaccctaatttctataacatcaaaactaccaac---tacaaggttaaaccccttttttcagaattatacaacccattattagagaaagctagtctca 18874676  T
Q  167 cccttaccttag 178  Q
    ||||||||||||    
T  18874675 cccttaccttag 18874664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 38299738 - 38299801
Alignment:
Q  115 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  38299738 ttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 38299801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 43276834 - 43276744
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||| |||||||||| |||| ||||| |||||||||||||    
T  43276834 aacatcaaaacctattaacaactacaaggttaaaccatttt-cagaattatacaacccattattagagaaagttagtcccacccttacctta 43276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 48212837 - 48212725
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcaca 166  Q
    ||||| ||||||| | | ||||||||||||| |||||| ||||| |||||||||  ||||| ||||| |||||||  |||||| || |||||||||||||    
T  48212837 tctaaccctaatttctataacatcaaaactaacaacaattacaatgttaaacccctttttttagaatcatacaacctattattggagaaagctagtcaca 48212738  T
Q  167 cccttaccttagg 179  Q
    |||||||||||||    
T  48212737 cccttaccttagg 48212725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 16250285 - 16250221
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||| |||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  16250285 gttaaaccctttttcaaaattatacaactcattattagagaaagttagtcccacccttaccttag 16250221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 34958319 - 34958383
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||  ||||| ||||||||||    
T  34958319 atcaacaactacaatgttaaatcctttttcagaattatacaactcatctttagagaaagctagtc 34958383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 58476 - 58412
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  58476 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 58412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 13315145 - 13315081
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||||||||| ||||||| |||||||||| |||| ||||| ||||||||||||||    
T  13315145 gttaaaccccttttcagaatcatacaacccattattagagaaagatagtctcacccttaccttag 13315081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 140
Target Start/End: Original strand, 16186857 - 16186928
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaa 140  Q
    ||||| ||||||| | | |||||||||||||  |||||| | ||||||||||||||||||||||||||||||    
T  16186857 tctaaccctaatttctataacatcaaaactactaacaaccataaggttaaaccctttttcagaattatacaa 16186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 3287743 - 3287797
Alignment:
Q  124 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  3287743 ttttcagaattatacaacctattattagagaaagctagtctcacccttaccttag 3287797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 42565922 - 42565872
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 137  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||    
T  42565922 aacaacaaaattatcaacaactacaagattaaaccctttttcagaattata 42565872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 19283051 - 19283108
Alignment:
Q  120 ccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||||||| |||| ||||| |||| ||||| |||||||||||||    
T  19283051 ccctttttcagaattatacaacccattcttagagaaagttagtctcacccttacctta 19283108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 13744573 - 13744509
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||| ||| |||||||||| |||||||||| ||||||||||||||    
T  13744573 gttaaacccctttttagaatcataaaacccattattagagaaagctagtcccacccttaccttag 13744509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 15700951 - 15700887
Alignment:
Q  109 acaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttac 173  Q
    |||| ||||||||| |||| ||||| |||||||||||||||||| |||||||||| | |||||||    
T  15700951 acaatgttaaacccctttttagaatcatacaactcattattagagaaagctagtctcccccttac 15700887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 15095773 - 15095726
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||| |||||| |||| |||||||||||||||||||||||||||||    
T  15095773 ttctactattaaatcaactaattacaacttctaaacctaattcccaaa 15095726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 15140129 - 15140176
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||| |||||| |||||||||||||||| |||||||||||||||||    
T  15140129 ttctactattaaatcaaccaattacaacttttaaacctaattcccaaa 15140176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 15700824 - 15700734
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||| ||||||| ||||||||||| | |||||||| |||| ||||  ||||||| |||||||||| |||||||||  || |||||||||||    
T  15700824 aacattaaaactaacaacaactacatg-ttaaacccctttttagaaccatacaacccattattagagaaagctagtatcatccttaccttag 15700734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 25943256 - 25943319
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||| |||||| ||  ||||||| |||||||||| |||||||||| |||||||||||||    
T  25943256 gttaaaccccttttcaaaaacatacaacccattattagagaaagctagtcccacccttacctta 25943319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 178
Target Start/End: Complemental strand, 12127287 - 12127162
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||||||||    || |||||  | | || || | ||||||| |  |||||||||||||||||| |  |||||    
T  12127287 aacaaccaattacaacttcaaaacctaattcccaaatttccataactaaaacctacaac-atgttaaactcaatttcagaattatacaacttagaattag 12127189  T
Q  152 ataaagctagtcacacccttaccttag 178  Q
    | |||| ||||| ||||||||||||||    
T  12127188 agaaagttagtcccacccttaccttag 12127162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 33002078 - 33002124
Alignment:
Q  41 tctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||||    
T  33002078 tctactattacaacaaccaattacaacttctaaccctaattcccaaa 33002124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 9743169 - 9743120
Alignment:
Q  87 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaatta 135  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  9743169 aacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 9743120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 17070425 - 17070384
Alignment:
Q  41 tctacaattaaaacaaccaattacaacttctaaacctaattc 82  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  17070425 tctacacttaaatcaaccaattacaacttctaaacctaattc 17070384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 831928 - 831864
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    |||||||||||||| |||||||||||||| |||||| |||||| |||  ||||| ||| ||||||    
T  831928 atcaacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaaactagtc 831864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 1197108 - 1197044
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    |||||||||||||| |||||||||||||| |||||| |||||| |||  ||||| ||| ||||||    
T  1197108 atcaacaactacaatgttaaacccttttttagaattgtacaacccatctttagagaaaactagtc 1197044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 8135366 - 8135326
Alignment:
Q  47 attaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||| ||||||||||||||||||||||||||||| ||||    
T  8135366 attaaatcaaccaattacaacttctaaacctaattctcaaa 8135326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 8930828 - 8930764
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||  ||||| ||||||||||||||    
T  8930828 gttaaacccctttttagaatcatacaacccattattagagaaatgtagtcccacccttaccttag 8930764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 18570636 - 18570700
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||  |||||  |||||| |||||||||| |||||||||| ||||||||||||||    
T  18570636 gttaaacccctttctagaatcttacaacccattattagagaaagctagtctcacccttaccttag 18570700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 178
Target Start/End: Original strand, 21661218 - 21661309
Alignment:
Q  86 aaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||| || ||||||||||  ||| ||||  |||||||||||||||||| |||||| ||||| | || | ||||| ||||||||||||||    
T  21661218 aaacatcacaattatcaacaacatcaaagttagcccctttttcagaattatataactca-tattaaagaaggttagtcccacccttaccttag 21661309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 12465384 - 12465349
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12465384 aacaaccaattacaacttcaaaacctaattcccaaa 12465349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 13132449 - 13132410
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  13132449 ttaaatcaaccgattacaacttctaaacctaattcccaaa 13132410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 13147596 - 13147561
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  13147596 aacaaccaattacaacttcaaaacctaattcccaaa 13147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 15119397 - 15119354
Alignment:
Q  87 aacatcaaaa-ctatcaacaactacaaggttaaaccctttttca 129  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  15119397 aacatcaaaatctattaacaactacaaggttaaaccctttttca 15119354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 20620214 - 20620249
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  20620214 aacaaccaattacaacttcaaaacctaattcccaaa 20620249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 20214147 - 20214209
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcga 187  Q
    ||||||||||||||||||||  ||| || |||| ||||| ||||||||||||||  |||||||    
T  20214147 tttcagaattatacaactcagaatttgagaaagttagtcccacccttaccttagattaatcga 20214209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 33060402 - 33060491
Alignment:
Q  88 acatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| ||| |||||| ||||  |||||||||||| ||||||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  33060402 acatcaaaattataaacaacaacaaaattaaacccttttccagaattata-gactcatgattaaagaaggttagtcccacccttaccttag 33060491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 8851283 - 8851159
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| |||||||||| |||||   ||| |||||  | | || ||| | | |||| |  |||||||||||||||||| |  |||||    
T  8851283 aacaaccaattacaacttcaaaacctaatttccaaattctcataactacaacctacaacatgct-aaactcaatttcagaattatacaacttagaattag 8851185  T
Q  152 ataaagctagtcacacccttacctta 177  Q
    | |||| ||||| |||||||||||||    
T  8851184 agaaagttagtcccacccttacctta 8851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 13698761 - 13698728
Alignment:
Q  54 caaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||| |||||||||||||    
T  13698761 caaccaattacaacttctaaccctaattcccaaa 13698728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 14160946 - 14160897
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||||||||||||||||| ||||||| ||||    
T  14160946 aacatcaaaacctattaacaactacaaggttaaaccccttttcaggatta 14160897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 14180450 - 14180397
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||  ||||||||||||||||||||    
T  14180450 tttcagaattatacaacttagaattagagaaaattagtcacacccttaccttag 14180397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 14318034 - 14318083
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||||| ||||    
T  14318034 aacatcaaaacctattaacaactgcaaggttaaaccctttttcaggatta 14318083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 20586352 - 20586405
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  20586352 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 20586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 11067468 - 11067520
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11067468 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 11067520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 12372274 - 12372326
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  12372274 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12372326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 12465312 - 12465260
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  12465312 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 12465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 16999361 - 16999397
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaa 88  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  16999361 aacaaccgattacaacttcaaaacctaattcccaaaa 16999397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 32433641 - 32433589
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  32433641 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 32433589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 35771494 - 35771430
Alignment:
Q  124 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 188  Q
    ||||||||||||||  ||| |  |||||| |||| ||||| ||||||||||||||| ||||||||    
T  35771494 ttttcagaattatatcacttagaattagagaaagttagtcccacccttaccttaggttaatcgat 35771430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 3e-56; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 48 - 178
Target Start/End: Original strand, 9638933 - 9639063
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 147  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9638933 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaattatcaacaactacaaggttaaaccctttttcagaattacacaactcatta 9639032  T
Q  148 ttagataaagctagtcacacccttaccttag 178  Q
    ||||| |||||||||| ||||||||||||||    
T  9639033 ttagagaaagctagtcccacccttaccttag 9639063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 14631079 - 14631188
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  14631079 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 14631178  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  14631179 cttaccttag 14631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 16296900 - 16296991
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16296900 aacatcaaaactaacaacaactaccaggttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacccttaccttag 16296991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 25513795 - 25513904
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  25513795 tctaaccctaatttctataacatcaaaactaacaacaactacaatgttaaaccctttttcagaattatacaactcattattagagaaagctagtcccacc 25513894  T
Q  169 cttaccttag 178  Q
     |||||||||    
T  25513895 attaccttag 25513904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14549637 - 14549723
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  14549637 caaccctaacttcattaacatcctaattttaacaatcaattctacaattaaaacacctaattacaacttctaaacctaattcccaaa 14549723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 35660902 - 35661002
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||||  | ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||| ||||||    
T  35660902 taaacctaattcatataacatcaaaactaacaacaactacaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccaccct 35661001  T
Q  171 t 171  Q
    |    
T  35661002 t 35661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 26446151 - 26446261
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||  |||    
T  26446151 tctaaccctaatttctataacatcaaaactaacaacaactacaagattaaaccatttttcagaattatacaacccattattagagaaagctagtcctacc 26446250  T
Q  169 cttaccttagg 179  Q
    ||||| |||||    
T  26446251 cttactttagg 26446261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 33186864 - 33186955
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||||    
T  33186864 aacatcaaaacctattaacaaccacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccctacctta 33186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 12424383 - 12424290
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaacccttttt--cagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||  |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  12424383 aacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 12424290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 2424477 - 2424385
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    |||||||||||||  |||||||||||| ||||||||||||||| |||||||||||| |  |||||| |||| ||||| |||||||||||||||    
T  2424477 aacatcaaaactaataacaactacaagattaaaccctttttcaaaattatacaacttagaattagagaaagttagtctcacccttaccttagg 2424385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 15239882 - 15239815
Alignment:
Q  111 aaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||||    
T  15239882 aaggttaaaccctttttcagatttatacaattcattattagagaaagctagtctcacccttaccttag 15239815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 188
Target Start/End: Original strand, 13847193 - 13847264
Alignment:
Q  117 aaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 188  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||    
T  13847193 aaaccattttttagaattatacaacccattattagagaaagctagtctcacccttaccttaggttaatcgat 13847264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 19434721 - 19434668
Alignment:
Q  4 ccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaac 57  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  19434721 ccctaacttcattaacatcttaatttcaacaatcaattctacatttaaaacaac 19434668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 15747851 - 15747787
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  ||||| |||| |||||    
T  15747851 atcaacaactacaatgttaaaccctttttcagaattatacaactcatctttagagaaagttagtc 15747787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 17142996 - 17143057
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagcta 160  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||  ||||| |||||||    
T  17142996 atcaacaactacaatgttaaaccccttttcagaattatacaactcatctttagagaaagcta 17143057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 14477594 - 14477684
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||  |||||| |||| | || | ||||  ||||||||||||||    
T  14477594 aacatcaaaactatcaacgactacaagatcaaaccctttttcagaattata-tactcatgattaaagaaggttagtgccacccttaccttag 14477684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 18462986 - 18463076
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||| |||| | || | ||||| |||| |||||||||    
T  18462986 aacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcccacctttaccttag 18463076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 9622478 - 9622542
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| | ||||| |||||||||| |||||||||| ||||||||||||||    
T  9622478 gttaaacccctttttagaatcagacaacccattattagagaaagctagtcccacccttaccttag 9622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 10273372 - 10273436
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||| |||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  10273372 gttatacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 10273436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 55583185 - 55583249
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| | ||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  55583185 gttaaacccctttttataatcatacaacccattattagagaaagctagtcccacccttaccttag 55583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 37019598 - 37019723
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||| ||||    || |||||  | | || ||| | |||||| |  |||||||||||||||||| |  |||||    
T  37019598 aacaaccaattacaacttcaaaacctaattctcaaattcccataactacaacctacaacatg-ttaaactcaatttcagaattatacaacttaaaattag 37019696  T
Q  152 ataaagctagtcacacccttaccttag 178  Q
    | |||| ||||||||||||||||||||    
T  37019697 agaaagttagtcacacccttaccttag 37019723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 12623278 - 12623327
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  12623278 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 12623327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 19566008 - 19565959
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  19566008 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 19565959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 45314173 - 45314124
Alignment:
Q  87 aacatcaaaactatcaacaactacaag-gttaaaccctttttcagaatta 135  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  45314173 aacatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 45314124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 26921598 - 26921550
Alignment:
Q  88 acatcaaaactatcaacaactacaag-gttaaaccctttttcagaatta 135  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  26921598 acatcaaaactaacaacaactacaaatgttaaaccctttttcagaatta 26921550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 16998453 - 16998488
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16998453 aacaaccaattacaacttcaaaacctaattcccaaa 16998488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 25091581 - 25091616
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  25091581 aacaaccaattacaacttcaaaacctaattcccaaa 25091616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 53630598 - 53630563
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  53630598 aacaaccaattacaacttcaaaacctaattcccaaa 53630563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 15115222 - 15115275
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  15115222 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 15115275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 19739772 - 19739809
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  19739772 tagtctcacccttaccttaggataatcgattggcagcc 19739809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 27996825 - 27996862
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  27996825 tagtcccacccttaccttaggataatcgattggcagcc 27996862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 135
Target Start/End: Original strand, 46741177 - 46741210
Alignment:
Q  102 aacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||||||||||||||||||||| ||||    
T  46741177 aacaactacaaggttaaaccctttttcaggatta 46741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 11425943 - 11425995
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11425943 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 11425995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 19610324 - 19610376
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  19610324 tttcagaattatacaacttaaaattagagaaagttagtctcacccttacctta 19610376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 25091653 - 25091705
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  25091653 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 25091705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 42875797 - 42875849
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||| |||||| ||||| |||||||||||||    
T  42875797 tttcagaattatacaacttagaattatataaagttagtcccacccttacctta 42875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 53630526 - 53630474
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  53630526 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 53630474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 13872 - 14019
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 147  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| |||||    
T  13872 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaacttcaaggttaaaccctttttcagaattttacaacccatta 13971  T
Q  148 ttagataaagctagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| |||||||||| ||||||||||||| ||| | ||||||||||||    
T  13972 ttagagaaagctagtcccacccttacctta-gattaacgatcggcagcc 14019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 19953 - 20019
Alignment:
Q  124 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 190  Q
    ||||||||||||||  ||| |  |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  19953 ttttcagaattataacacttagaattagagaaagttagtcccacccttaccttaggttaatcgatcg 20019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 18770 - 18639
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaatta-tacaactcatt 146  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  18770 ttaaatcaaccaattacaacttctaaacctaattcccaaaacatcaaaactaacaacaactacaaggttaaaccttttttcaaaattattacaactcatt 18671  T
Q  147 attagataaagctagtcacacccttaccttag 178  Q
    |||||| |||||||||| ||||||||||||||    
T  18670 attagagaaagctagtcccacccttaccttag 18639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 19825615 - 19825485
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 147  Q
    ||||| |||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||| |||| |||||    
T  19825615 ttaaatcaaccaattacaacttctaaacataattctcaaaacatcaaaactaacaacaactacaaggttaaaacctttttcagaattatgcaacccatta 19825516  T
Q  148 ttagataaagctagtcacacccttaccttag 178  Q
    ||||| |||||||||| ||||||||||||||    
T  19825515 ttagagaaagctagtctcacccttaccttag 19825485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 15998833 - 15998968
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  15998833 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacttagaattagagaaagttagtctcacc 15998932  T
Q  169 cttaccttaggataatcgatcggcagcccttcctct 204  Q
    ||||||||||||||||||| ||  ||||||||||||    
T  15998933 cttaccttaggataatcgaccgatagcccttcctct 15998968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 21683164 - 21683073
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  21683164 aacatcaaaacta-caacaactacaaggttaaaccctttttctgaattatacaacccattattagagaaagctagtcccacccttaccttagg 21683073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 18982536 - 18982625
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || |||| |||||||||    
T  18982536 catcaaacctagcaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatcccaccgttaccttag 18982625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 23658050 - 23658142
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||||  |||||||||| ||||||||||||||    
T  23658050 aacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacctattattagggaaagctagtcccacccttaccttag 23658142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 20410600 - 20410512
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |  |||||||||||||    
T  20410600 catcaaaactaataacaactacaaggttaaatcctttttcagaattatacaacccattattagagaaagctatttccacccttacctta 20410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 18585715 - 18585764
Alignment:
Q  34 aatcaattctacaattaaaacaaccaattacaacttctaaacctaattcc 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18585715 aatcaattctacaattaaaacaaccaattacaacttctaaacctaattcc 18585764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 29045260 - 29045324
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  29045260 gttaaaccctttttcaaaattatacaacccattattagagaaagctagtctcacccttaccttag 29045324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 1818915 - 1819005
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||  |||||| |||| | || | ||||| ||||||||||||||    
T  1818915 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tactcatgattaaagaaggttagtctcacccttaccttag 1819005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 18585665 - 18585716
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaa 52  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  18585665 caaccctaacttcattaacatcttaatttcaaaaatcaattctacaattaaa 18585716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 28948490 - 28948537
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||    
T  28948490 ttctactattaaaacaaccaattacaacttctaaacctaattcccaaa 28948537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 178
Target Start/End: Complemental strand, 34140560 - 34140455
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||| |||||||   ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  34140560 taaacttaattcctataacatcaaaactaacaacaactacaagattaaaccagatttcaaaattata-aacccattattaga-gaagctagtcccaccct 34140463  T
Q  171 taccttag 178  Q
    ||||||||    
T  34140462 taccttag 34140455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 178
Target Start/End: Complemental strand, 15890836 - 15890711
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||||||||  | ||||||||  | | || || | ||||||| |  |||||||||||||||||| |  |||||    
T  15890836 aacaaccaattacaacttcaaaacctaattcccaaattaacaaaactacaacctacaac-atgttaaactcaatttcagaattatacaacttagaattag 15890738  T
Q  152 ataaagctagtcacacccttaccttag 178  Q
    | |||| ||||| ||||||||||||||    
T  15890737 agaaagttagtcccacccttaccttag 15890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 24506205 - 24506155
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 137  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  24506205 aacatcaaaactatcaacaactacaaaattaaaccctttttcagaattata 24506155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 10446206 - 10446270
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  10446206 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 10446270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 31734669 - 31734772
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 185  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||||||||| |  ||| || |||| | || | ||||| ||||||||||||||| |||||    
T  31734669 aacatcaaaacctattaacaactgcaaggttaaaccctttttcagaattaca-tacttatgattaaagaaggttagtcccacccttaccttaggttaatc 31734767  T
Q  186 gatcg 190  Q
    |||||    
T  31734768 gatcg 31734772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 17318251 - 17318200
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaacta 99  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  17318251 ttaaatcaactaatcacaacttctaaacctaattcccaaaacatcaaaacta 17318200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 178
Target Start/End: Complemental strand, 34153176 - 34153071
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||| ||||||| | ||||||||||||| ||||||||||||| ||||| |   ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  34153176 taaacttaattcctataacatcaaaactaacaacaactacaagattaaaacagatttcaaaattata-aacccattattaga-gaagctagtcccaccct 34153079  T
Q  171 taccttag 178  Q
    ||||||||    
T  34153078 taccttag 34153071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 7217333 - 7217285
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  7217333 aacatcaaacctattaacaactacaaggttaaaccctttttcaggatta 7217285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 18982379 - 18982422
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaa 132  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  18982379 catcaaaactatcaacaactacaaaattaaaccctttttcagaa 18982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 22557210 - 22557259
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  22557210 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 22557259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 25921963 - 25922054
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||| ||| |||||||||||||||||||||||||| || |||| |  ||| || |||| |||| | ||||| ||||||||||||||    
T  25921963 aacatcaaaacctattaacaactacaaggttaaacccttttttaggattaca-tacttatgattaaataaggttagtcccacccttaccttag 25922054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 7827900 - 7827935
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7827900 aacaaccaattacaacttcaaaacctaattcccaaa 7827935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 23150411 - 23150376
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23150411 aacaaccaattacaacttcaaaacctaattcccaaa 23150376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 23501595 - 23501634
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  23501595 ttaaatcaacaaattacaacttctaaacctaattcccaaa 23501634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 27330105 - 27330070
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27330105 aacaaccaattacaacttcaaaacctaattcccaaa 27330070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 27390845 - 27390810
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  27390845 aacaaccaattacaacttcaaaacctaattcccaaa 27390810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 13285723 - 13285801
Alignment:
Q  100 tcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||| |||| | ||||||| |||||||||||||  ||||||| |||| | || | ||||| ||||||||||||||    
T  13285723 tcaacaacaacaatggtaaaccccttttcagaattatgaaactcatgattatagaaggttagtcccacccttaccttag 13285801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 16966800 - 16966837
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  16966800 tagtctcacccttaacttaggataatcgatcggcagcc 16966837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 18259192 - 18259155
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  18259192 tagtcccacccttaccttaggataatcgattggcagcc 18259155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 19655355 - 19655231
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    |||||| |||||||||||| ||||||||||||||||    || |||||  | | || ||| | |||||| |  |||||||||||||||||| |  |||||    
T  19655355 aacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatg-ttaaactcaatttcagaattatacaacttagaattag 19655257  T
Q  152 ataaagctagtcacacccttacctta 177  Q
    | |||| ||||| |||||||||||||    
T  19655256 agaaagttagtctcacccttacctta 19655231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 20183754 - 20183791
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  20183754 tagtcccacccttaccttaggttaatcgatcggcagcc 20183791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 22152237 - 22152200
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  22152237 tagtcccacccttaccttaggttaatcgatcggcagcc 22152200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 23431537 - 23431488
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||| ||||    
T  23431537 aacatcaaaacctattagcaactacaaggttaaaccctttttcaggatta 23431488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 7827972 - 7828024
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  7827972 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 7828024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 12041673 - 12041609
Alignment:
Q  124 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 188  Q
    ||||||||||||||||||| |  |||| | || | ||||| ||||||||||||||| ||||||||    
T  12041673 ttttcagaattatacaacttagaattaaagaaggttagtcccacccttaccttaggttaatcgat 12041609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 23150339 - 23150287
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  23150339 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 23150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 178
Target Start/End: Complemental strand, 14641677 - 14641547
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcatta 147  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||    
T  14641677 ttaaatcaacaaattacaacttctaaacctaattcccaaaacatcaatactaacaacaactacaaggttaaacccttttttagaattatacaacccatta 14641578  T
Q  148 ttagataaagctagtcacacccttaccttag 178  Q
    ||||| ||||||| || ||||||||||||||    
T  14641577 ttagagaaagctaatcccacccttaccttag 14641547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 17208468 - 17208577
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  17208468 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaactcattattagagaaagctagtcccacc 17208567  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  17208568 cttaccttag 17208577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 14152474 - 14152386
Alignment:
Q  102 aacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 190  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||| |||||    
T  14152474 aacaactacaaggttaaaccctttttcagaatgatacaactcattattagagaaagctagtcccacccttaccttaggttaatggatcg 14152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 14520408 - 14520499
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||| | |||||||||| ||||||||||||||    
T  14520408 aacatcaaaactaacaacaactacaaggttaaacctttttttagaattatacaacccattattaaagaaagctagtcccacccttaccttag 14520499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 29907603 - 29907692
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29907603 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29907692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 29948769 - 29948858
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29948769 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29948858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 29997923 - 29998012
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || ||||| | |||||||||| ||||||||||||||    
T  29997923 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccaatattaaagaaagctagtcccacccttaccttag 29998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 5215608 - 5215699
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||| ||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||    
T  5215608 aacatcaaaacctattaataactacaaggttaaaccctttttcataattatacaactcattattagagaaagctagtgccacccttacctta 5215699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 15566706 - 15566797
Alignment:
Q  88 acatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||||| ||||    
T  15566706 acatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttactttag 15566797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 22841342 - 22841278
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||| ||||    
T  22841342 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttacattag 22841278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 170
Target Start/End: Complemental strand, 45803407 - 45803338
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  45803407 caacaacaacgatgttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 45803338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 2247944 - 2247880
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  2247944 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 2247880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 178
Target Start/End: Complemental strand, 3160732 - 3160626
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||| | | || ||||||||||||||||||||||| ||||||||| |||| |||||||||  |||||| |||| | || | ||||| ||||||    
T  3160732 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaacccatttttagaattata-tactcatgattaaagaaggttagtctcaccct 3160634  T
Q  171 taccttag 178  Q
    ||||||||    
T  3160633 taccttag 3160626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 21845756 - 21845651
Alignment:
Q  72 aaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccctt 171  Q
    |||||||||| | | |||||||||||||| |||||||||||| |||||||||||||||||| ||||  ||| || |||| | || | ||||| |||||||    
T  21845756 aaacctaatttctataacatcaaaactattaacaactacaagcttaaaccctttttcagaactata-tacttatgattaaagaaggttagtcccaccctt 21845658  T
Q  172 accttag 178  Q
    |||||||    
T  21845657 accttag 21845651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 2841569 - 2841505
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||  |||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  2841569 gttaaacctctttttagaatcatacaacccattattagagaaagctagtcacacccttaccttag 2841505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 9511052 - 9511005
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  9511052 ttctactattaaaacaaccaattacaacttctaaacctaattctcaaa 9511005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 9519027 - 9518980
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  9519027 ttctactattaaaacaaccaattacaacttctaaacctaattctcaaa 9518980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 54875537 - 54875474
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| |||||||||||||    
T  54875537 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttacctta 54875474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 16050871 - 16050992
Alignment:
Q  68 ttctaaacctaattcccaaaacatcaaaactatcaacaactacaag--gttaaaccctttttcagaattatacaactcattattagataaagctagtcac 165  Q
    ||||||||||||||| |||| | ||||||||| |||||  |||||   |||||||||  ||||||||| |||||||| |  |||||| |||| ||||| |    
T  16050871 ttctaaacctaattctcaaatcctcaaaacta-caaca--tacaacttgttaaacccaatttcagaatcatacaacttagaattagagaaagttagtccc 16050967  T
Q  166 acccttaccttaggataatcgatcg 190  Q
    |||||||||||||| ||||||||||    
T  16050968 acccttaccttaggttaatcgatcg 16050992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 48631294 - 48631344
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 137  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  48631294 aacatcaaaactattaacaactacaagcttaaaccctttttcagaactata 48631344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 12917382 - 12917305
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || | |||||||||||||| ||||| ||||||| |||||||||| |||| ||||| |||||||| |||||    
T  12917382 caacaacaaccatgttaaacccttttttagaatcatacaacccattattagagaaagttagtcccacccttatcttag 12917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 3527220 - 3527156
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| | ||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  3527220 gttaaacccctttttaaaatcatacaacccattattagagaaagctagtcccacccttaccttag 3527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 6156700 - 6156763
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  6156700 gttaaacccctttt-agaatcatacaacccattattagagaaagctagtcccacccttaccttag 6156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 6159394 - 6159458
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| ||||| |||| ||||||||||||||    
T  6159394 gttaaacccctttttagaatcatacaacccattattagagaaagcgagtctcacccttaccttag 6159458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 17684926 - 17684824
Alignment:
Q  87 aacatcaaaactatcaacaactacaag--gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataat 184  Q
    ||||||||||||| ||| ||| |||||  ||||||||| |||| ||||| ||||||| |||||||| | ||| |||||| ||||||||||||| || |||    
T  17684926 aacatcaaaactaacaa-aacaacaagatgttaaacccctttttagaatcatacaacccattattacagaaaactagtcccacccttaccttaagaaaat 17684828  T
Q  185 cgat 188  Q
    ||||    
T  17684827 cgat 17684824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 24549016 - 24548952
Alignment:
Q  115 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    |||||||| |||| ||||| ||||||| ||||||||||||||| ||||| ||||||||| |||||    
T  24549016 ttaaacccctttttagaatcatacaacccattattagataaagttagtctcacccttactttagg 24548952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 13522429 - 13522391
Alignment:
Q  6 ctaacttcattaacatcttaattccaacaatcaattcta 44  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  13522429 ctaacttcattaacatcttaatttcaacaatcaattcta 13522391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 13520404 - 13520449
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggtt 116  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||    
T  13520404 taaacctaattcctataacatcaaaactaacaacaactacaaggtt 13520449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 49968993 - 49968948
Alignment:
Q  42 ctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||    
T  49968993 ctactattaaatcaaccaattacaacttataaacctaattcccaaa 49968948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 53646149 - 53646100
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  53646149 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 53646100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 54330397 - 54330348
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  54330397 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 54330348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 14442164 - 14442228
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||  |||| ||||| ||||||| |||||||| | |||||||||| ||||||||||||||    
T  14442164 gttaaaccgctttttagaatcatacaacccattattacagaaagctagtcccacccttaccttag 14442228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 17539106 - 17539158
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  ||||||||||| ||||| |||||||||||||    
T  17539106 tttcagaattatacaacttagaattagataaagttagtctcacccttacctta 17539158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 6003148 - 6003238
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || ||||||||||  ||| ||||  |||||||||||||||||| |||||| ||||| | || | ||||| ||||||||||||||    
T  6003148 aacatcacaattatcaacaacatcaaagttagcccctttttcagaattatagaactca-tattaaagaaggttagtcccacccttaccttag 6003238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 10563636 - 10563671
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10563636 aacaaccaattacaacttcaaaacctaattcccaaa 10563671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 17044894 - 17044929
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17044894 aacaaccaattacaacttcaaaacctaattcccaaa 17044929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 17518997 - 17518962
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17518997 aacaaccaattacaacttcaaaacctaattcccaaa 17518962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 17533859 - 17533824
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17533859 aacaaccaattacaacttcaaaacctaattcccaaa 17533824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 40807924 - 40807959
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  40807924 aacaaccaattacaacttcaaaacctaattcccaaa 40807959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 49900658 - 49900693
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  49900658 aacaaccaattacaacttcaaaacctaattcccaaa 49900693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 50348150 - 50348115
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  50348150 aacaaccaattacaacttcaaaacctaattcccaaa 50348115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 50350908 - 50350815
Alignment:
Q  87 aacatcaaaactatcaacaactac-aaggttaaaccc--tttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||| ||| |||||| ||||||||||||  |||||||||||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  50350908 aacatcaaaactaacaaaaactacaaaggttaaaccccttttttcagaattata-tactcatgattaaagaaggttagtcccacccttaccttag 50350815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 19568343 - 19568297
Alignment:
Q  41 tctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||| |||| ||| |||||||||||||||||| |||||||||||||    
T  19568343 tctactattacaactaccaattacaacttctaaccctaattcccaaa 19568297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 33565086 - 33565140
Alignment:
Q  124 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||| ||| |  |||||| |||| ||||||||||||||||||||    
T  33565086 ttttcagaattataccacttagaattagagaaagttagtcacacccttaccttag 33565140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 11563654 - 11563687
Alignment:
Q  54 caaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||| |||||||||||||||||    
T  11563654 caaccaattacaacttttaaacctaattcccaaa 11563687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 24177788 - 24177735
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| || |||||| |||| | ||| ||||||||||||||    
T  24177788 tttcagaattatacaacttataattagagaaagtttgtcccacccttaccttag 24177735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 24547189 - 24547254
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    ||||||| | |||| ||||| ||||||| |||||||||| |||| ||||| || ||||||||||||    
T  24547189 gttaaactcctttttagaatcatacaacccattattagagaaagatagtctcatccttaccttagg 24547254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 40807996 - 40808049
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  40807996 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40808049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 44274418 - 44274471
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  44274418 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 44274471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 11259431 - 11259483
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  11259431 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 11259483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 17044966 - 17045018
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17044966 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17045018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 17047126 - 17047178
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17047126 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17047178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 17541434 - 17541486
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  17541434 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 17541486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 22306635 - 22306583
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  22306635 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 22306583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 41172495 - 41172463
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattccc 84  Q
    ||||||||||||||||||| |||||||||||||    
T  41172495 aacaaccaattacaacttcaaaacctaattccc 41172463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 30138149 - 30138064
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaa 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30138149 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaa 30138064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 31456837 - 31456923
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31456837 caaccctaacttcattaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaatttccaaa 31456923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 71 - 178
Target Start/End: Original strand, 16063697 - 16063804
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||| ||||| ||||||    
T  16063697 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaacccttttttagaattatacaacccattattagagaaaggtagtcccaccct 16063796  T
Q  171 taccttag 178  Q
    ||||||||    
T  16063797 taccttag 16063804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 36508807 - 36508633
Alignment:
Q  2 aaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatc 101  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||||||      
T  36508807 aaccctaacttcattaacatcttaatttcatcaatcaattctacaattaaaacaaccaattacaacttctaaacataattcccaaatttccaaaactaca 36508708  T
Q  102 aacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    | | || ||   |||||| || |||||||||| |||||||| |  |||||| |||| ||||| |||||||||||||    
T  36508707 acctaccac-ctgttaaatccattttcagaatcatacaacttagaattagagaaagttagtctcacccttacctta 36508633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17876081 - 17876166
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17876081 caaccctaact-cattaacatcttaattccaacaatcaattctacaattaagacaaccaattacaacttctaaacctaattcccaaa 17876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 18744818 - 18744927
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| ||||    
T  18744818 tctaaccctaatttctataacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagttagtcccacc 18744917  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  18744918 cttaccttag 18744927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 23199315 - 23199207
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | |||||||||||||  |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||| ||||    
T  23199315 tctaaccctaatttctataacatcaaaactactaacaactacaaggttaaaccatttttcagaattatacaacccattattagagaaagctagtcccacc 23199216  T
Q  169 cttacctta 177  Q
    |||||||||    
T  23199215 cttacctta 23199207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 178
Target Start/End: Complemental strand, 6551396 - 6551289
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||    
T  6551396 taaacctaattcctataacatcaaatctaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtctcaccct 6551297  T
Q  171 taccttag 178  Q
    ||||||||    
T  6551296 taccttag 6551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 660752 - 660842
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||| | |||||||||||||    
T  660752 aacatcaaaactaacaacaactacaaggttaaa-cctttttcagaattatacaaccccttattagagaaagctagtc-cccccttaccttagg 660842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 1627176 - 1627071
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttc-agaattatacaactcattattagataaagctagtcacac 167  Q
    ||||| ||||||| | | ||||||||||||| ||| || ||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||| |||    
T  1627176 tctaaccctaatttctataacatcaaaactaacaataaatacaagggtaaaccctttttttagaattatacaactcattattagagaaagctagtcccac 1627077  T
Q  168 ccttac 173  Q
    ||||||    
T  1627076 ccttac 1627071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 26762364 - 26762467
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 185  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| | || | || |||| | || | ||||| ||||||||||||||| |||||    
T  26762364 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattacataa-ttatgattaaagaaggttagtcccacccttaccttaggttaatc 26762462  T
Q  186 gatcg 190  Q
    |||||    
T  26762463 gatcg 26762467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 32607379 - 32607315
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  32607379 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 32607315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 1627008 - 1626916
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| |  ||| || |||| | || | |||||||||||||||||||||    
T  1627008 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacacccttaccttagg 1626916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 14025897 - 14025848
Alignment:
Q  87 aacatcaaaa-ctatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  14025897 aacatcaaaatctattaacaactacaaggttaaaccctttttcaggatta 14025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 26749993 - 26750085
Alignment:
Q  87 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    |||||||||||| || ||||||||||||||||||||| ||||||| ||||||  ||| || |||| | || | ||||| |||||||||||||||    
T  26749993 aacatcaaaacttattaacaactacaaggttaaaccccttttcaggattata-tacttatgattaaaaaaggttagtctcacccttaccttagg 26750085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 21914510 - 21914455
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcccttcctctctgcttctcc 214  Q
    ||||| ||||||||||||||| ||||||||||||||||  |||||| || ||||||    
T  21914510 tagtcccacccttaccttaggttaatcgatcggcagcctctcctctttggttctcc 21914455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 24068191 - 24068234
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 129  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  24068191 aacatcaaaacctattaacaactacaaggttaaaccctttttca 24068234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 21398697 - 21398643
Alignment:
Q  124 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||| ||||| ||||||| |||||||||| ||||||| || ||||||||||||||    
T  21398697 tttttagaatcatacaacccattattagagaaagctaatcccacccttaccttag 21398643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 8833296 - 8833247
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| |||||||| |||||||||||||||||||| ||||    
T  8833296 aacatcaaaacctattaacaactataaggttaaaccctttttcaggatta 8833247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 20313253 - 20313328
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || | |||||||||| ||||||||||||| ||| || |||||||  ||||||||| ||||||||||||||    
T  20313253 caacaacaaccatgttaaaccctatttcagaattata-aacccactattaga-gaagctagtcccacccttaccttag 20313328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 20566482 - 20566515
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattccca 85  Q
    ||||||||||||||||||| ||||||||||||||    
T  20566482 aacaaccaattacaacttcaaaacctaattccca 20566515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 21300096 - 21300043
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  21300096 tttcagaattatacaacttaaaattagagaaagttagtcccacccttaccttag 21300043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 21504102 - 21504147
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaa 132  Q
    |||||||||||||  |||||||||||  ||||||||||||||||||    
T  21504102 aacatcaaaactactaacaactacaaacttaaaccctttttcagaa 21504147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 36732518 - 36732410
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  36732518 taaacctaattcctataacatcaaaactaacaacaactacaaggttaaactctttttcagaattatacaacccattattagagaaagctagtcacaccct 36732419  T
Q  171 taccttagg 179  Q
    |||||||||    
T  36732418 taccttagg 36732410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 18816403 - 18816295
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| ||||    
T  18816403 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccatttttagagaaagctagtcccacc 18816304  T
Q  169 cttacctta 177  Q
    |||||||||    
T  18816303 cttacctta 18816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 21514635 - 21514743
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||| ||||    
T  21514635 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttaagaattatacaactcattattagagaaatctagtcccacc 21514734  T
Q  169 cttacctta 177  Q
    |||||||||    
T  21514735 cttacctta 21514743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 22208230 - 22208322
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  22208230 aacatcaaaacctattaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 22208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 4380725 - 4380615
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  4380725 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacc 4380626  T
Q  169 cttaccttagg 179  Q
    |||||||||||    
T  4380625 cttaccttagg 4380615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 22258397 - 22258306
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  22258397 aacatcaaaacctatcaacaactgcaaggttaaacccttttttggaattatacaactcattattagagaaagctagtctcacccttacctta 22258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 12577841 - 12577932
Alignment:
Q  87 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||| ||||||||| || |||||||||||||||| ||||||||||||| ||||||||| |||| ||||| ||||||||||||||    
T  12577841 aacatcaaaactaacaacaactataaaggttaaaccctttttcggaattatacaact-attattagagaaagttagtcccacccttaccttag 12577932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 178
Target Start/End: Complemental strand, 21676697 - 21676592
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||| | | || ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| ||||||    
T  21676697 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccaccct 21676600  T
Q  171 taccttag 178  Q
    ||||||||    
T  21676599 taccttag 21676592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 72 - 178
Target Start/End: Complemental strand, 21678949 - 21678845
Alignment:
Q  72 aaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccctt 171  Q
    |||||||||| | | || ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| |||||||    
T  21678949 aaacctaattgctataatatcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccaccctt 21678852  T
Q  172 accttag 178  Q
    |||||||    
T  21678851 accttag 21678845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 21676585 - 21676499
Alignment:
Q  90 atcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||||| ||| ||||||||||  ||||||||| ||||||||||||||    
T  21676585 atcaaaactatcaacaactacaaagttaaaccctatttcataattata-aacccattattaga-gaagctagtcccacccttaccttag 21676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 22483775 - 22483834
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttac 173  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  22483775 gttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttac 22483834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 18023634 - 18023570
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  18023634 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 18023570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 21399706 - 21399770
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  21399706 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 21399770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 21794199 - 21794263
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  21794199 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 21794263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 22345153 - 22345217
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| ||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  22345153 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttag 22345217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 22356813 - 22356877
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| ||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  22356813 gttaaaccccttttcggaatcatacaacccattattagagaaagctagtcccacccttaccttag 22356877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 22610330 - 22610266
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| ||||| ||||||||||||||    
T  22610330 gttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttaccttag 22610266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 38184990 - 38184926
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  38184990 atcaataactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 38184926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 22483914 - 22483976
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    ||||||| || | |||||||||||||| |||||||||||||||||||||||| |||| |||||    
T  22483914 caacaacaaccatgttaaaccctttttaagaattatacaactcattattagagaaagttagtc 22483976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 20022161 - 20022120
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaaac 89  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  20022161 ttaaatcaaccaattacaacttctaaacctaattcccaaaac 20022120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 22318049 - 22318000
Alignment:
Q  38 aattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  22318049 aattctactattaaaccaaccaattacaacttctaaacctaaatcccaaa 22318000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 21579296 - 21579206
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| |  ||| || |||| | || | |||||||||||||||||||    
T  21579296 aacatcaaaacatattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcacacccttacctta 21579206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 36305988 - 36306050
Alignment:
Q  115 ttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||| ||||||||||||| ||||||| | |||||||| |||||||||| ||||||||||||||    
T  36305988 ttaaaacctttttcagaatcatacaac-cgttattagagaaagctagtctcacccttaccttag 36306050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 22532268 - 22532222
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaa 86  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||||    
T  22532268 ttctactattaaaacaatcaattacaacttttaaacctaattcccaa 22532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 86
Target Start/End: Complemental strand, 22536953 - 22536907
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaattcccaa 86  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||||    
T  22536953 ttctactattaaaacaatcaattacaacttttaaacctaattcccaa 22536907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 12037254 - 12037205
Alignment:
Q  87 aacatcaaaa-ctatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  12037254 aacatcaaaagctattaacaactacaaggttaaaccctttttcaggatta 12037205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 17906901 - 17906836
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 190  Q
    ||||||||| |||||||| |  |||||| |||| ||||| ||||||||||||||| ||||||||||    
T  17906901 tttcagaatcatacaacttagaattagagaaagttagtcccacccttaccttaggttaatcgatcg 17906836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 177
Target Start/End: Complemental strand, 20083762 - 20083638
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||||||||   ||| |||||  | | || || | | ||||| |  |||||||||||||||||| |  |||||    
T  20083762 aacaaccaattacaacttcaaaacctaattcccaaattctcataactacaacctacaac-atgctaaactcaatttcagaattatacaacttagaattag 20083664  T
Q  152 ataaagctagtcacacccttacctta 177  Q
    | |||| ||||| |||||||||||||    
T  20083663 agaaagttagtctcacccttacctta 20083638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 22474718 - 22474767
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  22474718 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 22474767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 29762958 - 29762909
Alignment:
Q  87 aacatcaaaact-atcaacaactacaaggttaaaccctttttcagaatta 135  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  29762958 aacatcaaaacttattaacaactacaaggttaaaccctttttcaggatta 29762909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 5082336 - 5082301
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5082336 aacaaccaattacaacttcaaaacctaattcccaaa 5082301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 18834412 - 18834474
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||| |||| ||||| ||||||  |||||||||| |||||||||| |||||||||||||    
T  18834412 gttaaacccctttt-agaatcatacaatccattattagagaaagctagtcccacccttacctta 18834474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 19140693 - 19140728
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19140693 aacaaccaattacaacttcaaaacctaattcccaaa 19140728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 22966772 - 22966815
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 129  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  22966772 aacatcaaaacctattaacaactacaaggttaaaccctttttca 22966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 39694329 - 39694266
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgat 188  Q
    ||||||||| |||||||| || |||||| |||||||||||| ||||||| ||||| || |||||    
T  39694329 tttcagaatcatacaacttataattagagaaagctagtcacgcccttacattaggttagtcgat 39694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 45469348 - 45469309
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  45469348 ttaaatcaaccaattacaacttctaaacataattcccaaa 45469309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 17978506 - 17978457
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||| ||||    
T  17978506 aacatcaaaacctattaacaactacaaggttaaatcctttttcaggatta 17978457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 41680223 - 41680174
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||| ||||    
T  41680223 aacatcaaaacctattaacaactacaaggttaaaccctttatcaggatta 41680174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 357758 - 357844
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  357758 caaccctaacttcattaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 357844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 1383718 - 1383632
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1383718 caaccctaacttcattaacatcttaatttctacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 1383632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 24884351 - 24884433
Alignment:
Q  5 cctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24884351 cctaacttcattaatatcttaattccaacaatcaattctacaattaagacaaccaattacaacttctaaacctaattcccaaa 24884433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 21315566 - 21315475
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  21315566 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 21315475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 21335356 - 21335265
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  21335356 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccacccttaccttag 21335265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22501846 - 22501926
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaatt 81  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  22501846 caaccctaacttcgttaacatcttaattccaacaatcaattttacaattaaaacaaccaatcacaacttctaaccctaatt 22501926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 22509780 - 22509860
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaatt 81  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  22509780 caaccctaacttcgttaacatcttaattccaacaatcaattttacaattaaaacaaccaatcacaacttctaaccctaatt 22509860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 23610570 - 23610680
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||| | ||||||||| ||||||||||| ||||||| ||||||||||| |||||||||| |||||||||| ||||    
T  23610570 tctaaccctaatttctataacatcaaaacaaacaacaactagaaggttaaaccatttttcataattatacaacccattattagagaaagctagtcccacc 23610669  T
Q  169 cttaccttagg 179  Q
    |||||||||||    
T  23610670 cttaccttagg 23610680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 21369237 - 21369346
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | |||||||||||||  |  ||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||| ||||    
T  21369237 tctaaccctaatttctataacatcaaaactaatataaactacaaggttaaaccctttttcagaattatacaacccattgttagagaaagcttgtcccacc 21369336  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  21369337 cttaccttag 21369346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 25584352 - 25584302
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 137  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  25584352 aacatcaaaactatcatcaacgacaaggttaaaccctttttcagaattata 25584302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 23801485 - 23801549
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  23801485 gttaaacccctttttagaatcatacaacccattattagagaaagctagtcccacccttaccttag 23801549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 149555 - 149500
Alignment:
Q  123 tttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||| |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  149555 ttttttagaattatacaactcattattagagaaagctagttccacccttaccttag 149500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 19647199 - 19647246
Alignment:
Q  90 atcaaaactatcaacaactacaaggttaaaccctttttcagaattata 137  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||    
T  19647199 atcaaaactattaacaactacaagattaaaccctttttcagaattata 19647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 20006060 - 20005970
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||| ||| |||||| ||||  |||||||||||||||||||||||  |||||| |||| | || ||||||| ||||||||||||||    
T  20006060 aacatcaaaattattaacaacaacaaaattaaaccctttttcagaattata-gactcatgattaaagaaggctagtcccacccttaccttag 20005970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 34491316 - 34491239
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcatta-ttagataaagctagtcacacccttaccttag 178  Q
    ||||||| || | |||||||||||||||||||||||||||||| ||| |||||  ||||||||| ||||||||||||||    
T  34491316 caacaacaaccatgttaaaccctttttcagaattatacaactcgttatttaga-gaagctagtcccacccttaccttag 34491239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 28345051 - 28344987
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||| | |||||||||| ||||||||||||||||||| |||||    
T  28345051 gttaaacccctttttagaatcatacagcccattattagagaaagctagtcacacccttatcttag 28344987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 28652660 - 28652593
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactac-aaggttaaaccctttttcagaatta 135  Q
    ||||| ||||||| | | ||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  28652660 tctaaccctaatttctataacatcaaaactaacaacaactacaaaggctaaaccctttttcagaatta 28652593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 24516114 - 24516239
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||||||||    || |||||  | | || || | ||||||| |  |||||||||||||||||| |  |||||    
T  24516114 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac-atgttaaactcaatttcagaattatacaacttagaattag 24516212  T
Q  152 ataaagctagtcacacccttaccttag 178  Q
    | |||| ||||| ||||||||||||||    
T  24516213 agaaagttagtcccacccttaccttag 24516239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 87
Target Start/End: Original strand, 25142133 - 25142166
Alignment:
Q  54 caaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||||||||||||||||||    
T  25142133 caaccaattacaacttctaaacctaattcccaaa 25142166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 178
Target Start/End: Original strand, 45535899 - 45535978
Alignment:
Q  98 tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||| ||||| |||||||||||||||||||||||  |||| | |||| | || | ||||| ||||||||||||||    
T  45535899 tatcaacaacaacaagattaaaccctttttcagaattata-gactcgtgattaaagaaggttagtcccacccttaccttag 45535978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 3539760 - 3539799
Alignment:
Q  48 ttaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  3539760 ttaaatcaaccaattacaacttctaaacctaattctcaaa 3539799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 5031253 - 5031218
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  5031253 aacaaccaattacaacttcaaaacctaattcccaaa 5031218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 9975857 - 9975892
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  9975857 aacaaccaattacaacttcaaaacctaattcccaaa 9975892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 17307414 - 17307449
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17307414 aacaaccaattacaacttcaaaacctaattcccaaa 17307449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 19201324 - 19201289
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19201324 aacaaccaattacaacttcaaaacctaattcccaaa 19201289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 22251572 - 22251537
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  22251572 aacaaccaattacaacttcaaaacctaattcccaaa 22251537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 24780964 - 24780929
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  24780964 aacaaccaattacaacttcaaaacctaattcccaaa 24780929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 17307486 - 17307539
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  17307486 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 17307539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 40912320 - 40912373
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  40912320 tttcagaattatacaacttagaattagagaaagttagtcccacccttaccttag 40912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 5031181 - 5031129
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  5031181 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 5031129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 24780892 - 24780840
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  24780892 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24780840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 178
Target Start/End: Original strand, 2827 - 2934
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  2827 taaacctaattcctataacatcgaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcccaccct 2926  T
Q  171 taccttag 178  Q
    ||||||||    
T  2927 taccttag 2934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 1964 - 2073
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  1964 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 2063  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  2064 cttaccttag 2073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 114 - 199
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaa 86  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  114 caaccttaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaatttccaa 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 192
Target Start/End: Complemental strand, 10780 - 10747
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggc 192  Q
    ||||| ||||||||||||||||||||||||||||    
T  10780 tagtcccacccttaccttaggataatcgatcggc 10747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 186304 - 186195
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  186304 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacc 186205  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  186204 cttaccttag 186195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 6860 - 6778
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcc 83  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6860 caaccctaacttcattaacatcttaatttcaaaaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcc 6778  T

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Target: scaffold0156 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 16485 - 16567
Alignment:
Q  5 cctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16485 cctaacttcattaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattgccaaa 16567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 18219 - 18329
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | || |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  18219 tctaaccctaatttctataaaatcaaaaccaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagagaaagctagtcacacc 18318  T
Q  169 cttaccttagg 179  Q
    |||||||||||    
T  18319 cttaccttagg 18329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 106226 - 106140
Alignment:
Q  1 caaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  106226 caaccctaacttcgttaacatcttaatttcaacaatcaattctacaattaaaacaaccaattacaacgtctaaacctaattcccaaa 106140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 21489 - 21574
Alignment:
Q  2 aaccctaacttcattaacatcttaattccaacaatcaattctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21489 aaccctaacttcattaacatcttaatttaaacaatcaattctacaattaaaacaaccaattacaacttctaaacataattcccaaa 21574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 29696 - 29662
Alignment:
Q  53 acaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||| ||||||||||||||||    
T  29696 acaaccaattacaacttcaaaacctaattcccaaa 29662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 3512 - 3421
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||    
T  3512 aacatcaaaactaacaacaactacaaggttaaaccctttttcagaatcatacaacgcattattagagaaagctagtcccacccttaccttag 3421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 1036 - 1128
Alignment:
Q  85 aaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||| |||||||||||||    
T  1036 aaaacatcaaaactaacaacatctacaaggttaaaccctttttcagaattatacaatccattattagagaaagctagtctcacccttacctta 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 14674 - 14585
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  14674 catcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 14585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 23732 - 23643
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||    
T  23732 catcaaaactaacaacaactacaaatttaaaccctttttcagaattatacaacccattattagagaaagctagtctcacccttaccttag 23643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 66; Significance: 2e-29; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 89 - 178
Target Start/End: Complemental strand, 16507 - 16418
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || || ||||||||||||||    
T  16507 catcaaacctaacaacaactacaaggttaaaccctttttcagaattatacaacccattattagataaagttaatctcacccttaccttag 16418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 18777 - 18700
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||| |||| || || |||||| |||||||    
T  18777 caacaactacaaggctaaaccgtttttaagaattatacaactcattattagagaaagttaatcccaccctcaccttag 18700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 18945 - 18902
Alignment:
Q  89 catcaaaactatcaacaactacaaggttaaaccctttttcagaa 132  Q
    ||||||||||||||||||||||||  ||||||| ||||||||||    
T  18945 catcaaaactatcaacaactacaaaattaaaccttttttcagaa 18902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 17611 - 17520
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||||    
T  17611 aacagcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaatccattattagaaaaagctagtccgacccttaccttag 17520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 18048 - 17939
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |  |||||| |||| ||||| ||||    
T  18048 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaatcctttttcagaattatacaacttagaattagagaaagttagtcccacc 17949  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  17948 cttaccttag 17939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 4898 - 4988
Alignment:
Q  87 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||||| |||||||||||| |||||||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  4898 aacatcaaaactaacaacaactacaaaggttaaacccttttacagaattatacaac-cattattagagaaagctagtcccacccttacctta 4988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 2287 - 2198
Alignment:
Q  90 atcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |  |||||| |||  ||||| |||||||||||||||    
T  2287 atcaaaactaacaacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaaattagtcccacccttaccttagg 2198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 87 - 179
Target Start/End: Complemental strand, 5395 - 5303
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||| |  |||||| |||| ||||| |||||||||||||||    
T  5395 aacatcaaaacgaacaacaactacaaggttaaaccctttttaagaattatacaacttaaaattagagaaagttagtcccacccttaccttagg 5303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 2564 - 2454
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaacccttttt--cagaattatacaactcattattagataaagctagtcaca 166  Q
    ||||| ||||||| | | |||||||||||||  ||| |||||||||||||||| |||||  |||||||||||||| |||||||||| |||||||||| ||    
T  2564 tctaaccctaatttctataacatcaaaactaataacgactacaaggttaaaccatttttttcagaattatacaacccattattagagaaagctagtccca 2465  T
Q  167 cccttacctta 177  Q
    |||||||||||    
T  2464 cccttacctta 2454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 19169 - 19260
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |  |||||| |||| ||||| ||||||||| ||||    
T  19169 aacatcaaaactaataacaactacaaggttaaaccctttttcagaattatacaacttagaattagagaaagttagtcccacccttacgttag 19260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 19123 - 19160
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctt 124  Q
    ||||||||||||||||||||||||||||||||||||||    
T  19123 aacatcaaaactatcaacaactacaaggttaaaccctt 19160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 5592 - 5685
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttt--tcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  5592 aacatcaaaacctattaacaactacaaagttaaaccctttttttcagaattatacaacccattattagagaaagctagtcccacccttacctta 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 15723 - 15615
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacc 168  Q
    ||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||  ||||||||||  ||| ||||| ||||    
T  15723 tctaaccctaatttctataacatcaaaactaacaacaactacaaggttaaacccttttttagaatcatacaaaccattattaga-gaagttagtcccacc 15625  T
Q  169 cttaccttag 178  Q
    ||||||||||    
T  15624 cttaccttag 15615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 6390 - 6471
Alignment:
Q  97 ctatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||| |||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||    
T  6390 ctataaacaactacaagattaatccctttttcagaattacacaactcattattagagaaagctagtcttacccttaccttag 6471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 61937 - 61847
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  61937 aacatcaaaactaacaacaactacaaggttaaatcc-ttttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 61847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 68331 - 68376
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcccttcctct 204  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||    
T  68331 tagtcccacccttaccttaagataatcgatcgacagcccttcctct 68376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 5445 - 5507
Alignment:
Q  116 taaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  5445 taaaccctttttcagaattatacaactcattattagagaaaggtagtcccacccttaccttag 5507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 11592 - 11668
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||| || | |||||||||||||||||||||||||||| |||| ||||| |||  ||||| |||||||| ||||    
T  11592 caacaacaacgatgttaaaccctttttcagaattatacaacccatttttagagaaatttagtcccacccttatctta 11668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 19845 - 19909
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| ||| ||||||  |||||||||||||    
T  19845 gttaaacccctttttagaatcatacaacccattattagagaaatctagtcctacccttaccttag 19909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 11318 - 11353
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  11318 aacaaccaattacaacttcaaaacctaattcccaaa 11353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 2223 - 2300
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||||    
T  2223 caacaacaactatgttaaaccctttttcagaattatacaacccattattatagaaagctagtcccacccttaccttag 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 52 - 204
Target Start/End: Complemental strand, 820 - 669
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    |||||| |||||||||||| ||||||||||||||||    || |||||  | | || ||| | |||||| |  |||||||||||||||||| |  |||||    
T  820 aacaactaattacaacttcaaaacctaattcccaaattcccataactacaacctacaacatg-ttaaactcaatttcagaattatacaacttagaattag 722  T
Q  152 ataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctct 204  Q
    | |||| ||||| ||||| |||||||||||||| |||||||||||||||||||    
T  721 agaaagttagtcccacccctaccttaggataattgatcggcagcccttcctct 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 38531 - 38441
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||| |||| | || | ||||||||||||||||||||    
T  38531 aacatcaaaactattaacaactacaaaattaaaccctttttcagaattata-tactcatgattaaagaaggttagtcacacccttaccttag 38441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 178
Target Start/End: Complemental strand, 59761 - 59655
Alignment:
Q  71 taaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacaccct 170  Q
    ||||||||||| | | || ||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||| | || | ||| | ||||||    
T  59761 taaacctaatttctataatatcaaaactatcaacaactacaaagttaaaccctttttcagaattata-tactcatgattaaagaaggttagacccaccct 59663  T
Q  171 taccttag 178  Q
    ||||||||    
T  59662 taccttag 59655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 169051 - 168972
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcggcagcccttcctct 204  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||| |||||||||||||| |||||||||||||||||||    
T  169051 tttcagaattatacaacttagaattagagaaagttagtcccacccctaccttaggataattgatcggcagcccttcctct 168972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 174183 - 174286
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 185  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| |||| |  ||| || |||| | || | ||||| ||||||||| ||||| |||||    
T  174183 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccacccttactttaggttaatc 174281  T
Q  186 gatcg 190  Q
    |||||    
T  174282 gatcg 174286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 143611 - 143663
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| |||||||||||||||||||    
T  143611 tttcagaattatacaacttagaattagagaaagttagtcacacccttacctta 143663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 40253 - 40160
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaatta-taca-actcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||| || | |||||| |||||| || | ||||| ||||||||||||||    
T  40253 aacatcaaaactatcaacaactacatggttaaacccttttttagaattattatatactcatgattagagaaggttagtcccacccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 23503 - 23587
Alignment:
Q  94 aaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||| |||||||| ||||||| ||||| |||| ||| ||||||||| |||||||||| ||||||||||  |||||||||||||    
T  23503 aaactaacaacaactgcaaggtttaacccctttttagatttatacaacccattattagagaaagctagtcctacccttaccttag 23587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 66148 - 66071
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || | |||||||||||||||||||||||||||| |||||||| | ||| |||||| ||||||||||||||    
T  66148 caacaacaaccatgttaaaccctttttcagaattatacaacccattattaaagaaatctagtcccacccttaccttag 66071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 111344 - 111425
Alignment:
Q  109 acaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatcgatcg 190  Q
    |||| ||||||||| |||| ||||| ||||||| |||||||||| |||||||| | ||||||||||||||  ||||||||||    
T  111344 acaatgttaaacccctttttagaatcatacaacccattattagagaaagctagccccacccttaccttagattaatcgatcg 111425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 73076 - 73139
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    ||||||||| |||| ||||| |||||||||||||||||| |||| ||||| |||||||||||||    
T  73076 gttaaacccctttttagaatcatacaactcattattagagaaagttagtcccacccttacctta 73139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 75926 - 75990
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| ||||||| || |||||||||| ||||||||||||||    
T  75926 gttaaacccctttttagaatcatacaacccattattggagaaagctagtcccacccttaccttag 75990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 328414 - 328379
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  328414 aacaaccaattacaacttcgaaacctaattcccaaa 328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 359 - 423
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  359 atcaacaactacaatgttaaaccctttttcagaattatacaacccatctttagagaaagctagtc 423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 3167 - 3257
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||||||  |||||| |||| | || | ||||| ||||||||||||||    
T  3167 aacatcaaaactatcaacaactacaaaattaaaccctttttcataattata-tactcatgattaaagaaggttagtcccacccttaccttag 3257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 174
Target Start/End: Original strand, 26689 - 26776
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacc 174  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||  |  |||||| |||| || || ||||||||||    
T  26689 aacatcaaagctaacaacaactacaaagttaaaccctttttcagaattatacaacctaaaattagagaaagttaatcccacccttacc 26776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 23576 - 23666
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||| |||||||||||  ||||||||||||| |||||||||  |||||| |||| | || |  |||| ||||||||||||||    
T  23576 aacatcaaaactattaacaactacaaaattaaacccttttttagaattata-tactcatgattaaagaaggtcagtcccacccttaccttag 23666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 12212 - 12253
Alignment:
Q  6 ctaacttcattaacatcttaattccaacaatcaattctacaa 47  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12212 ctaacttcattaacatcttaattccaacaatcaattctacaa 12253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 4383 - 4475
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttagg 179  Q
    ||||||||||| ||| |||||||||||||||||||| |||||| | ||||||  ||| || |||| | || | ||||| |||||||||||||||    
T  4383 aacatcaaaacctattaacaactacaaggttaaaccttttttcgggattata-tacttatgattaaagaaggttagtcccacccttaccttagg 4475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 35262 - 35185
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || | |||||||||||||| ||||||||||||| |||||||||  |||||||||  ||||||||||||||    
T  35262 caacaacaaccatgttaaacccttttttagaattatacaacccattattagggaaagctagtaccacccttaccttag 35185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 10570 - 10633
Alignment:
Q  99 atcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtc 163  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||  ||||| ||||||||||    
T  10570 atcaacaactacaatgttaaaccctttttcagaattatacaac-catctttagagaaagctagtc 10633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 22519 - 22463
Alignment:
Q  157 gctagtcacacccttaccttaggataatcgatcggcagcccttcctctctgcttctc 213  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||    
T  22519 gctagtctcacccttaccttagaataatcgatcggcagcccttcctctttggttctc 22463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 7603 - 7513
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||| |||  |||||| |||| | || | ||||| ||||||||||||||    
T  7603 aacatcaaaactatcaacaactataaaattaaaccctttttcagaatcata-tactcataattaaagaaggttagtcccacccttaccttag 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 117926 - 117889
Alignment:
Q  51 aaacaaccaattacaacttctaaacctaattcccaaaa 88  Q
    ||||||||||||||||||||||||||||||||||||||    
T  117926 aaacaaccaattacaacttctaaacctaattcccaaaa 117889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 113093 - 113057
Alignment:
Q  51 aaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||||||||||||||||||||||||||||||||||    
T  113093 aaacaaccaattacaacttctaaacctaattcccaaa 113057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 81501 - 81530
Alignment:
Q  58 caattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||||||||||||||    
T  81501 caattacaacttctaaacctaattcccaaa 81530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 190
Target Start/End: Complemental strand, 10536 - 10433
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttaggataatc 185  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||| |||| |  ||| || |||| | || | ||||| ||||||||||||||| |||||    
T  10536 aacatcaaaacctattaacaactacaatgttaaaccctttttcaggattaca-tacttatgattaaagaaggttagtcccacccttaccttaggttaatc 10438  T
Q  186 gatcg 190  Q
    |||||    
T  10437 gatcg 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 127406 - 127342
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||  |||||||||| |||||||||| ||||||||||||||    
T  127406 gttaaacccctttttagaatcatacaatccattattagagaaagctagtcccacccttaccttag 127342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 10937 - 10999
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||| ||||| ||||||| |||||||||| |||||||||  |||||||||||||    
T  10937 gttaaacccttttt-agaatcatacaacccattattagagaaagctagttccacccttacctta 10999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 137
Target Start/End: Original strand, 28513 - 28564
Alignment:
Q  87 aacatcaaaactatcaacaactacaa-ggttaaaccctttttcagaattata 137  Q
    ||||| ||||||| |||||||||||| |||||||||||||||||||||||||    
T  28513 aacataaaaactaacaacaactacaaaggttaaaccctttttcagaattata 28564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 17075 - 17118
Alignment:
Q  94 aaactatcaacaactacaaggttaaaccctttttcagaattata 137  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  17075 aaactatcaacaactacaaagttaaaccctttttaagaattata 17118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 26606 - 26649
Alignment:
Q  94 aaactatcaacaactacaaggttaaaccctttttcagaattata 137  Q
    ||||||||||||||||||| |||||||||||||| |||||||||    
T  26606 aaactatcaacaactacaaagttaaaccctttttaagaattata 26649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 178
Target Start/End: Original strand, 66 - 191
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||||||||    || |||||  | | || || | ||||||| |  |||||||||||||||||| |  |||||    
T  66 aacaaccaattacaacttcaaaacctaattcccaaattcccataactacaacctacaac-atgttaaactcaatttcagaattatacaacttagaattag 164  T
Q  152 ataaagctagtcacacccttaccttag 178  Q
    | |||| ||||| ||||||||||||||    
T  165 agaaagttagtcccacccttaccttag 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 8811 - 8745
Alignment:
Q  112 aggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||| ||||| |||| ||||| ||||||| ||||||||||  ||||||||| ||||||||||||||    
T  8811 aggttcaacccctttttagaatcatacaacccattattagagtaagctagtctcacccttaccttag 8745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 28664 - 28726
Alignment:
Q  75 cctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattata 137  Q
    ||||||||| | ||||  |||||||| |||||||||||| |||||| ||||||||||||||||    
T  28664 cctaattcctataacaataaaactattaacaactacaagattaaacgctttttcagaattata 28726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 23990 - 23932
Alignment:
Q  69 tctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaacccttttt 127  Q
    ||||| ||||||| | | |||||||||||||  ||||||||||||||||||||||||||    
T  23990 tctaaccctaatttctataacatcaaaactaataacaactacaaggttaaacccttttt 23932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 8843 - 8897
Alignment:
Q  124 ttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||| ||||||  ||||||||||||||||||||| |||||||| |||||    
T  8843 ttttcagaatcatacaatccattattagataaagctagtcccacccttaacttag 8897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 10888 - 10842
Alignment:
Q  41 tctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||| |||| |||||||||||||||||||||| |||||||||||||    
T  10888 tctactattacaacaaccaattacaacttctaaccctaattcccaaa 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 87
Target Start/End: Complemental strand, 5156 - 5124
Alignment:
Q  55 aaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| |||||||||||||    
T  5156 aaccaattacaacttctaaccctaattcccaaa 5124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 2155 - 2110
Alignment:
Q  42 ctacaattaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||| |||||| |||||||||||||||| |||||||||||||||||    
T  2155 ctactattaaaccaaccaattacaacttataaacctaattcccaaa 2110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 307 - 356
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  307 aacatcaaaacctattaacaactacaaggttaaaccctttttcaggatta 356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 31922 - 32046
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||||||||    || ||||| ||||   ||  | | ||||| |  |||||||||||||||||| |  |||||    
T  31922 aacaaccaattacaacttcaaaacctaattcccaaattcccataacta-caacctataacatgctaaactcaatttcagaattatacaacttagaattag 32020  T
Q  152 ataaagctagtcacacccttacctta 177  Q
    | |||| |||||||||||||||||||    
T  32021 agaaagttagtcacacccttacctta 32046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 177
Target Start/End: Original strand, 37229 - 37353
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaaacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattag 151  Q
    ||||||||||||||||||| ||||||||||||||||    || ||||| ||||   ||  | | ||||| |  |||||||||||||||||| |  |||||    
T  37229 aacaaccaattacaacttcaaaacctaattcccaaattcccataacta-caacctataacatgctaaactcaatttcagaattatacaacttagaattag 37327  T
Q  152 ataaagctagtcacacccttacctta 177  Q
    | |||| |||||||||||||||||||    
T  37328 agaaagttagtcacacccttacctta 37353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 77687 - 77740
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  77687 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 77740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 499092 - 499129
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  499092 tagtcccacccttaccttaggataatcgattggcagcc 499129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 40096 - 40160
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||||||| |||||||||| |||| ||||| || |||||||||||    
T  40096 gttaaacccctttttagaatcatacaacccattattagagaaagttagtcgcatccttaccttag 40160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 68789 - 68725
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||| |||| ||||| ||| ||| |||||||||| |||| ||||| ||||||||||||||    
T  68789 gttaaacccgtttttagaatcatataacccattattagagaaaggtagtcccacccttaccttag 68725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 43848 - 43786
Alignment:
Q  114 gttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||| ||||||||||||| ||| |||||||||| || ||||||| ||||||||||||||    
T  43848 gttaaaccctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttag 43786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 570 - 660
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||| |||||||||| ||||  ||||||| ||||| ||||||||| | ||||| |||| | || | ||||| ||||||||||||||    
T  570 aacatcaaaattatcaacaacaacaaaattaaaccatttttaagaattataga-ctcatgattaaagaaggttagtcccacccttaccttag 660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 1133 - 1168
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1133 aacaaccaattacaacttcaaaacctaattcccaaa 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 1205 - 1257
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  1205 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 1257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 592 - 557
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  592 aacaaccaattacaacttcaaaacctaattcccaaa 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 520 - 468
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  520 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 4838 - 4803
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4838 aacaaccaattacaacttcaaaacctaattcccaaa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 1093 - 1128
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  1093 aacaaccaattacaacttcaaaacctaattcccaaa 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 1165 - 1218
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||  |||| ||||||||||||||||||||    
T  1165 tttcagaattatacaacttagaattaggaaaagttagtcacacccttaccttag 1218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 2492 - 2527
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  2492 aacaaccaattacaacttcaaaacctaattcccaaa 2527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Original strand, 3110 - 3145
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3110 aacaaccaattacaacttcaaaacctaattcccaaa 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 31892 - 31982
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||| |||  |||||| |||| | |  | ||||| ||||||||||||||    
T  31892 aacatcaaaactattaacaactataaaattaaaccctttttcagaatcata-tactcatgattaaagatggttagtctcacccttaccttag 31982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 8086 - 8129
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 129  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  8086 aacatcaaaacctattaacaactacaaggttaaaccctttttca 8129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 29273 - 29316
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttca 129  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  29273 aacatcaaaacctattaacaactacaaggttaaaccctttttca 29316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 12657 - 12622
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12657 aacaaccaattacaacttcaaaacctaattcccaaa 12622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 87
Target Start/End: Complemental strand, 21917 - 21882
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattcccaaa 87  Q
    ||||||||||||||||||| ||||||||||||||||    
T  21917 aacaaccaattacaacttcaaaacctaattcccaaa 21882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 49692 - 49782
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||||||||||||||||  | ||  ||||||||||||||||||||||   |||||| |||| | || | ||||| ||||||||||||||    
T  49692 aacatcaaaactatcaacaaaaataaaattaaaccctttttcagaattat-ggactcatgattaaagaaggttagtcccacccttaccttag 49782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 1279 - 1313
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaacc 121  Q
    ||||||||||||||||||||||| |||||||||||    
T  1279 aacatcaaaactatcaacaactataaggttaaacc 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 6785 - 6819
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaacc 121  Q
    ||||||||||||||||||||||| |||||||||||    
T  6785 aacatcaaaactatcaacaactataaggttaaacc 6819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 90 - 135
Alignment:
Q  87 aacatcaaaactatcaacaactacaaggttaaaccctttttcagaa 132  Q
    |||||||||||||| |||||||||||  | ||||||||||||||||    
T  90 aacatcaaaactattaacaactacaaattaaaaccctttttcagaa 135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 9025 - 9074
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||| ||||    
T  9025 aacatcaaaacctattaacaactacaagattaaaccctttttcaggatta 9074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 6509 - 6468
Alignment:
Q  87 aacatcaaaactatcaacaactac-aaggttaaacccttttt 127  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  6509 aacatcaaaactaacaacaactacaaaggttaaacccttttt 6468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 5690 - 5615
Alignment:
Q  101 caacaactacaaggttaaaccctttttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    ||||||| || | |||||| ||| ||||||||||||| ||| |||||||||| || ||||||| ||||||||||||||    
T  5690 caacaacaaccatgttaaatcctatttcagaattata-aacccattattagagaa-gctagtcccacccttaccttag 5615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 8557 - 8598
Alignment:
Q  40 ttctacaattaaaacaaccaattacaacttctaaacctaatt 81  Q
    |||||| |||||| |||||||||||||||||||| |||||||    
T  8557 ttctactattaaatcaaccaattacaacttctaaccctaatt 8598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 35490 - 35543
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttaccttag 178  Q
    |||||||||||||||||| |  |||||| |||| ||||| ||||||||||||||    
T  35490 tttcagaattatacaacttagaattagagaaagttagtctcacccttaccttag 35543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 55975 - 56012
Alignment:
Q  159 tagtcacacccttaccttaggataatcgatcggcagcc 196  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  55975 tagtctcacccttaccttaggataatcgattggcagcc 56012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 62680 - 62729
Alignment:
Q  87 aacatcaaaac-tatcaacaactacaaggttaaaccctttttcagaatta 135  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||| ||||    
T  62680 aacatcaaaacctattaacaaccacaaggttaaaccctttttcaggatta 62729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 78992 - 79025
Alignment:
Q  52 aacaaccaattacaacttctaaacctaattccca 85  Q
    ||||||||||||||||||| ||||||||||||||    
T  78992 aacaaccaattacaacttcaaaacctaattccca 79025  T

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Target: scaffold0047; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 79049 - 79101
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  79049 tttcagaattatacaacttagaattagagaaagttagtctcacccttacctta 79101  T

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Target: scaffold0859 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 4605 - 4645
Alignment:
Q  47 attaaaacaaccaattacaacttctaaacctaattcccaaa 87  Q
    |||||| |||| |||||||||||||||||||||||| ||||    
T  4605 attaaaccaactaattacaacttctaaacctaattctcaaa 4645  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 124
Target Start/End: Original strand, 20159 - 20199
Alignment:
Q  85 aaaacatcaaaac-tatcaacaactacaaggttaaaccctt 124  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  20159 aaaacatcaaaacctattaacaactacaaggttaaaccctt 20199  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 78237 - 78185
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  78237 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 78185  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 24183 - 24131
Alignment:
Q  125 tttcagaattatacaactcattattagataaagctagtcacacccttacctta 177  Q
    |||||||||||||||||| |  |||||| |||| ||||| |||||||||||||    
T  24183 tttcagaattatacaacttagaattagagaaagttagtcccacccttacctta 24131  T

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