View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9051_low_8 (Length: 287)
Name: NF9051_low_8
Description: NF9051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9051_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 23 - 273
Target Start/End: Original strand, 46224498 - 46224748
Alignment:
| Q |
23 |
ttcgtgttcttgattgttatattaattttgaattagaaaaataatttatttagcacaagtgactttaatgaaaacctaattttattaaactgtgatttta |
122 |
Q |
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| T |
46224498 |
ttcgtgttcttgattgttatattaattttgaattagaaaaataatttatttagcacaagtgactttaatgaaaacctaattttattaaactgtgatttta |
46224597 |
T |
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| Q |
123 |
tgaaagtcaattgttatgccgaattaccttattcagatgatgtgctatgaatttgttttgaatggttctgtgataccaaatgtgttactgctcttatata |
222 |
Q |
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| T |
46224598 |
tgaaagtcaattgttatgccgaattaccttattcagatgatgtgctatgaatttgttttgaatggttctgtgataccaaatgtgttactgctcttatata |
46224697 |
T |
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| Q |
223 |
catatatacaaaacattcttcgatgtactgccttgttcctatgaattaatt |
273 |
Q |
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| T |
46224698 |
catatatacaaaacattcttcgatgtactgccttgttcctatgaattaatt |
46224748 |
T |
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