View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9054_low_1 (Length: 1089)

Name: NF9054_low_1
Description: NF9054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9054_low_1
NF9054_low_1
[»] chr6 (33 HSPs)
chr6 (19-1089)||(31680397-31681484)
chr6 (616-777)||(8693323-8693483)
chr6 (616-777)||(19402504-19402664)
chr6 (616-784)||(12653970-12654137)
chr6 (616-779)||(4660735-4660897)
chr6 (616-777)||(23654559-23654718)
chr6 (616-777)||(23101060-23101220)
chr6 (616-747)||(2488461-2488591)
chr6 (616-777)||(1106515-1106679)
chr6 (616-777)||(15589777-15589937)
chr6 (616-777)||(21507506-21507666)
chr6 (616-784)||(12481031-12481198)
chr6 (616-784)||(30813359-30813526)
chr6 (616-784)||(9043782-9043951)
chr6 (623-786)||(8978415-8978577)
chr6 (637-783)||(14782828-14782973)
chr6 (616-750)||(35219565-35219698)
chr6 (629-777)||(4394079-4394226)
chr6 (732-784)||(20028482-20028534)
chr6 (694-786)||(20845293-20845390)
chr6 (732-784)||(29285036-29285088)
chr6 (710-784)||(20496480-20496554)
chr6 (694-787)||(31748241-31748334)
chr6 (702-778)||(15176099-15176175)
chr6 (702-778)||(15469993-15470069)
chr6 (694-789)||(34020885-34020980)
chr6 (616-774)||(6295901-6296058)
chr6 (616-774)||(6302711-6302868)
chr6 (618-679)||(6419533-6419594)
chr6 (694-787)||(13233845-13233938)
chr6 (717-786)||(16913610-16913679)
chr6 (694-747)||(29920646-29920699)
chr6 (616-777)||(31705474-31705634)
[»] chr5 (39 HSPs)
chr5 (616-777)||(39179497-39179657)
chr5 (616-777)||(26293919-26294079)
chr5 (616-784)||(11734497-11734664)
chr5 (618-777)||(6281353-6281511)
chr5 (635-777)||(2555021-2555162)
chr5 (616-777)||(17331637-17331797)
chr5 (623-783)||(3740634-3740794)
chr5 (616-777)||(17732039-17732198)
chr5 (616-777)||(17699862-17700022)
chr5 (616-777)||(26294726-26294886)
chr5 (616-777)||(39531060-39531224)
chr5 (616-777)||(17095893-17096053)
chr5 (616-777)||(18654091-18654251)
chr5 (616-777)||(20483495-20483655)
chr5 (616-784)||(7151098-7151265)
chr5 (629-777)||(28040938-28041085)
chr5 (687-777)||(980748-980841)
chr5 (616-747)||(42781340-42781470)
chr5 (616-777)||(23881768-23881928)
chr5 (694-786)||(6074473-6074565)
chr5 (696-787)||(20145958-20146049)
chr5 (616-783)||(32347375-32347541)
chr5 (623-789)||(39415926-39416090)
chr5 (616-750)||(7771473-7771606)
chr5 (618-748)||(42396164-42396293)
chr5 (629-750)||(177769-177889)
chr5 (715-784)||(39532099-39532168)
chr5 (732-784)||(14535185-14535237)
chr5 (732-784)||(29098082-29098134)
chr5 (616-752)||(32309830-32309965)
chr5 (694-781)||(20271004-20271091)
chr5 (694-781)||(23428548-23428635)
chr5 (710-781)||(27241360-27241431)
chr5 (616-679)||(34431470-34431533)
chr5 (700-787)||(40564900-40564987)
chr5 (686-783)||(1419317-1419414)
chr5 (709-774)||(3079078-3079143)
chr5 (616-777)||(6635557-6635717)
chr5 (625-682)||(17566131-17566188)
[»] chr3 (64 HSPs)
chr3 (636-784)||(2148042-2148189)
chr3 (616-777)||(40012932-40013092)
chr3 (616-784)||(44984525-44984692)
chr3 (616-783)||(30155950-30156116)
chr3 (618-777)||(54706394-54706552)
chr3 (623-777)||(1074561-1074714)
chr3 (616-777)||(11819392-11819553)
chr3 (616-777)||(13701662-13701822)
chr3 (616-780)||(105708-105870)
chr3 (616-784)||(41867993-41868159)
chr3 (616-783)||(55455165-55455331)
chr3 (616-784)||(33637696-33637863)
chr3 (623-783)||(40883542-40883701)
chr3 (618-777)||(4206221-4206374)
chr3 (624-783)||(4817548-4817706)
chr3 (618-781)||(48401397-48401559)
chr3 (694-787)||(28995046-28995139)
chr3 (618-783)||(31462417-31462581)
chr3 (616-777)||(48855186-48855346)
chr3 (618-750)||(2192414-2192545)
chr3 (629-777)||(4082017-4082164)
chr3 (709-784)||(3312729-3312804)
chr3 (616-783)||(49627764-49627930)
chr3 (618-772)||(3457236-3457389)
chr3 (616-777)||(14585771-14585931)
chr3 (616-777)||(24483356-24483516)
chr3 (616-777)||(53155090-53155250)
chr3 (1049-1089)||(11149512-11149552)
chr3 (616-784)||(48652109-48652276)
chr3 (634-777)||(54238697-54238840)
chr3 (694-781)||(34960665-34960752)
chr3 (625-760)||(53402947-53403081)
chr3 (616-774)||(31270621-31270778)
chr3 (635-777)||(38530233-38530374)
chr3 (694-787)||(1165133-1165226)
chr3 (623-784)||(3961449-3961609)
chr3 (700-777)||(22485274-22485351)
chr3 (694-787)||(33076569-33076662)
chr3 (616-777)||(45047806-45047966)
chr3 (1049-1089)||(8860657-8860697)
chr3 (1049-1089)||(10888677-10888717)
chr3 (1049-1089)||(11131684-11131724)
chr3 (1049-1089)||(11153802-11153842)
chr3 (1049-1089)||(11162776-11162816)
chr3 (687-787)||(20200788-20200888)
chr3 (687-787)||(20202970-20203070)
chr3 (687-787)||(43839247-43839347)
chr3 (618-690)||(48212728-48212800)
chr3 (634-777)||(35175017-35175158)
chr3 (694-781)||(48401141-48401228)
chr3 (616-679)||(55090359-55090422)
chr3 (709-787)||(1806211-1806289)
chr3 (1051-1089)||(11160675-11160713)
chr3 (694-784)||(21586186-21586276)
chr3 (717-787)||(22286511-22286581)
chr3 (618-780)||(34103420-34103580)
chr3 (726-784)||(41598245-41598303)
chr3 (1049-1086)||(13160351-13160388)
chr3 (1049-1086)||(13170402-13170439)
chr3 (1049-1086)||(13289036-13289073)
chr3 (1049-1086)||(13332275-13332312)
chr3 (1049-1086)||(13343460-13343497)
chr3 (616-720)||(19148341-19148445)
chr3 (634-671)||(51742197-51742234)
[»] chr1 (44 HSPs)
chr1 (616-777)||(4882029-4882188)
chr1 (616-777)||(15390904-15391064)
chr1 (662-784)||(15312325-15312446)
chr1 (694-787)||(13691500-13691593)
chr1 (616-777)||(44517457-44517617)
chr1 (616-784)||(12871908-12872075)
chr1 (616-781)||(28677791-28677955)
chr1 (616-777)||(29205577-29205737)
chr1 (687-787)||(34566965-34567065)
chr1 (726-785)||(10599165-10599224)
chr1 (700-787)||(2350906-2350993)
chr1 (688-786)||(33125543-33125641)
chr1 (624-783)||(33486696-33486857)
chr1 (629-682)||(25689518-25689571)
chr1 (634-750)||(27535033-27535148)
chr1 (687-787)||(36621635-36621735)
chr1 (687-787)||(38644527-38644627)
chr1 (616-772)||(42276669-42276824)
chr1 (618-777)||(3233080-3233238)
chr1 (709-784)||(28399088-28399163)
chr1 (710-781)||(40862579-40862650)
chr1 (661-784)||(47551382-47551504)
chr1 (694-787)||(21326757-21326850)
chr1 (700-777)||(29726332-29726409)
chr1 (616-784)||(32878995-32879162)
chr1 (694-777)||(10627308-10627391)
chr1 (616-671)||(18344011-18344066)
chr1 (700-775)||(20413094-20413169)
chr1 (626-737)||(33938706-33938816)
chr1 (694-777)||(45750787-45750870)
chr1 (732-787)||(48003496-48003551)
chr1 (717-787)||(1768211-1768281)
chr1 (694-784)||(8893579-8893669)
chr1 (734-784)||(8960791-8960841)
chr1 (732-782)||(10188659-10188709)
chr1 (616-750)||(11877114-11877247)
chr1 (616-779)||(13152732-13152896)
chr1 (616-690)||(16141006-16141080)
chr1 (717-787)||(38646868-38646938)
chr1 (616-747)||(42491211-42491338)
chr1 (717-787)||(44562509-44562579)
chr1 (687-752)||(2597303-2597368)
chr1 (694-787)||(15276183-15276276)
chr1 (621-682)||(29938603-29938664)
[»] scaffold0294 (1 HSPs)
scaffold0294 (616-777)||(3719-3879)
[»] chr7 (51 HSPs)
chr7 (616-777)||(21990971-21991131)
chr7 (618-784)||(45482357-45482519)
chr7 (623-777)||(32643277-32643430)
chr7 (623-784)||(38273191-38273351)
chr7 (616-777)||(48304044-48304204)
chr7 (616-781)||(3266682-3266843)
chr7 (616-783)||(46025707-46025873)
chr7 (629-783)||(36719225-36719379)
chr7 (617-783)||(37375709-37375873)
chr7 (616-777)||(6667704-6667864)
chr7 (616-781)||(32741048-32741212)
chr7 (616-777)||(21603767-21603927)
chr7 (616-769)||(45457208-45457360)
chr7 (616-780)||(4621032-4621195)
chr7 (629-777)||(42644964-42645111)
chr7 (616-777)||(9785626-9785786)
chr7 (624-777)||(40761897-40762049)
chr7 (629-777)||(10574673-10574821)
chr7 (616-776)||(17508856-17509015)
chr7 (616-776)||(17544199-17544358)
chr7 (618-774)||(24319877-24320032)
chr7 (715-785)||(6646359-6646429)
chr7 (623-777)||(10094749-10094902)
chr7 (616-782)||(17473413-17473578)
chr7 (616-782)||(17579636-17579801)
chr7 (623-777)||(22747168-22747321)
chr7 (616-750)||(41288292-41288425)
chr7 (616-777)||(37593392-37593552)
chr7 (629-784)||(5238239-5238390)
chr7 (618-750)||(11833354-11833485)
chr7 (700-787)||(47750018-47750105)
chr7 (717-787)||(8611384-8611454)
chr7 (700-786)||(29804422-29804508)
chr7 (703-781)||(34594268-34594346)
chr7 (726-783)||(5684658-5684715)
chr7 (726-783)||(5709708-5709765)
chr7 (629-738)||(15674028-15674136)
chr7 (694-787)||(40775551-40775644)
chr7 (694-787)||(47156669-47156762)
chr7 (618-777)||(1280791-1280949)
chr7 (700-787)||(21552198-21552285)
chr7 (616-679)||(43847379-43847442)
chr7 (694-784)||(9137243-9137333)
chr7 (635-781)||(42603450-42603595)
chr7 (735-781)||(44482652-44482698)
chr7 (625-682)||(14762420-14762477)
chr7 (715-784)||(21954583-21954652)
chr7 (694-787)||(26017395-26017488)
chr7 (616-657)||(35544813-35544854)
chr7 (717-786)||(42490988-42491057)
chr7 (726-787)||(49167209-49167270)
[»] chr2 (62 HSPs)
chr2 (616-784)||(4603968-4604135)
chr2 (616-777)||(17267778-17267938)
chr2 (616-777)||(35333814-35333974)
chr2 (616-781)||(9978330-9978494)
chr2 (616-777)||(20560785-20560945)
chr2 (616-777)||(27095998-27096158)
chr2 (616-777)||(34416415-34416575)
chr2 (616-746)||(4739669-4739798)
chr2 (616-777)||(13878661-13878821)
chr2 (616-777)||(14018786-14018946)
chr2 (616-777)||(33012357-33012517)
chr2 (700-777)||(34471269-34471346)
chr2 (616-777)||(18089064-18089226)
chr2 (616-784)||(25068143-25068310)
chr2 (623-784)||(11798197-11798356)
chr2 (616-750)||(12890769-12890902)
chr2 (623-777)||(44942595-44942748)
chr2 (710-786)||(5071123-5071199)
chr2 (618-777)||(4426313-4426471)
chr2 (709-783)||(7072718-7072792)
chr2 (629-774)||(38534970-38535114)
chr2 (687-784)||(11931159-11931256)
chr2 (616-784)||(15920161-15920322)
chr2 (616-777)||(36868317-36868477)
chr2 (623-775)||(5754593-5754744)
chr2 (732-784)||(19904795-19904847)
chr2 (702-778)||(23256375-23256451)
chr2 (694-777)||(11937595-11937678)
chr2 (646-777)||(22597444-22597575)
chr2 (617-679)||(28261558-28261620)
chr2 (694-783)||(30933536-30933625)
chr2 (629-777)||(32314734-32314881)
chr2 (616-777)||(43473797-43473957)
chr2 (687-787)||(3465213-3465313)
chr2 (629-777)||(12704996-12705142)
chr2 (700-784)||(17056212-17056296)
chr2 (700-784)||(17068659-17068743)
chr2 (700-784)||(17095229-17095313)
chr2 (624-679)||(7071435-7071490)
chr2 (616-747)||(9689637-9689767)
chr2 (709-787)||(2251099-2251177)
chr2 (717-787)||(3603269-3603339)
chr2 (717-787)||(5930707-5930777)
chr2 (616-750)||(16136414-16136547)
chr2 (717-787)||(25516776-25516846)
chr2 (726-784)||(31271663-31271721)
chr2 (623-777)||(31908476-31908629)
chr2 (694-784)||(34480252-34480342)
chr2 (717-787)||(43567157-43567227)
chr2 (694-787)||(3397716-3397809)
chr2 (629-690)||(5172174-5172235)
chr2 (694-787)||(7640093-7640186)
chr2 (715-784)||(11580895-11580964)
chr2 (616-745)||(11942709-11942837)
chr2 (726-787)||(18141250-18141311)
chr2 (726-787)||(25771729-25771790)
chr2 (694-787)||(35353924-35354017)
chr2 (726-787)||(36508213-36508274)
chr2 (616-781)||(38384118-38384282)
chr2 (616-745)||(40038975-40039103)
chr2 (694-787)||(43929037-43929130)
chr2 (726-787)||(44167480-44167541)
[»] chr8 (31 HSPs)
chr8 (616-777)||(24790830-24790988)
chr8 (616-777)||(2024884-2025044)
chr8 (616-777)||(14600358-14600518)
chr8 (616-777)||(30026542-30026702)
chr8 (623-784)||(32778639-32778799)
chr8 (616-777)||(37612945-37613105)
chr8 (616-783)||(13570427-13570591)
chr8 (618-777)||(4757457-4757615)
chr8 (616-750)||(43936840-43936973)
chr8 (616-777)||(39067350-39067510)
chr8 (694-781)||(10338568-10338655)
chr8 (616-781)||(31202754-31202917)
chr8 (616-777)||(5526111-5526271)
chr8 (616-781)||(10148241-10148405)
chr8 (694-786)||(18190588-18190680)
chr8 (687-787)||(27534142-27534242)
chr8 (616-747)||(11162225-11162355)
chr8 (618-777)||(41362041-41362200)
chr8 (688-778)||(11298493-11298583)
chr8 (618-771)||(2968830-2968982)
chr8 (732-784)||(6219886-6219938)
chr8 (616-777)||(9501878-9502037)
chr8 (700-781)||(12357085-12357166)
chr8 (629-746)||(13575882-13575998)
chr8 (700-781)||(19489118-19489199)
chr8 (629-750)||(28296788-28296908)
chr8 (616-747)||(2234130-2234260)
chr8 (694-787)||(8054545-8054638)
chr8 (717-786)||(16996649-16996718)
chr8 (732-777)||(37128263-37128308)
chr8 (700-777)||(40490276-40490353)
[»] chr4 (50 HSPs)
chr4 (616-784)||(6882249-6882413)
chr4 (618-783)||(7060617-7060781)
chr4 (616-777)||(8712816-8712977)
chr4 (616-777)||(393926-394086)
chr4 (616-747)||(27091047-27091177)
chr4 (616-783)||(36124009-36124175)
chr4 (646-783)||(22757388-22757523)
chr4 (637-783)||(51152418-51152563)
chr4 (616-777)||(20887409-20887569)
chr4 (616-777)||(45350722-45350882)
chr4 (616-777)||(45360201-45360361)
chr4 (700-784)||(6082174-6082258)
chr4 (629-780)||(53647912-53648063)
chr4 (624-747)||(3171284-3171405)
chr4 (618-781)||(7083475-7083637)
chr4 (694-780)||(47466208-47466294)
chr4 (616-777)||(11209965-11210125)
chr4 (616-777)||(13965852-13966012)
chr4 (624-784)||(31932549-31932708)
chr4 (616-783)||(477673-477839)
chr4 (700-783)||(26742207-26742290)
chr4 (616-750)||(29266556-29266688)
chr4 (635-781)||(626230-626375)
chr4 (616-746)||(8517111-8517240)
chr4 (629-783)||(38943822-38943975)
chr4 (616-777)||(43244033-43244193)
chr4 (616-755)||(18502494-18502632)
chr4 (618-777)||(50801511-50801669)
chr4 (687-781)||(3673778-3673872)
chr4 (623-777)||(31522255-31522408)
chr4 (717-787)||(34115416-34115486)
chr4 (623-777)||(39837903-39838056)
chr4 (694-787)||(9662137-9662230)
chr4 (1049-1086)||(17853581-17853618)
chr4 (694-787)||(23926325-23926418)
chr4 (616-705)||(24826019-24826108)
chr4 (616-784)||(3159264-3159431)
chr4 (694-774)||(25658479-25658559)
chr4 (732-784)||(26623980-26624032)
chr4 (687-787)||(35658261-35658361)
chr4 (687-746)||(6408770-6408829)
chr4 (616-671)||(24611450-24611505)
chr4 (635-774)||(32616530-32616668)
chr4 (726-777)||(39523719-39523770)
chr4 (694-784)||(5814633-5814723)
chr4 (616-690)||(19745785-19745859)
chr4 (616-690)||(19793947-19794021)
chr4 (735-784)||(9229701-9229750)
chr4 (726-787)||(9549723-9549784)
chr4 (694-787)||(50981451-50981544)
[»] scaffold0155 (1 HSPs)
scaffold0155 (616-784)||(35377-35544)
[»] scaffold0112 (1 HSPs)
scaffold0112 (694-787)||(25249-25342)
[»] scaffold0056 (1 HSPs)
scaffold0056 (616-777)||(74473-74633)
[»] scaffold1379 (1 HSPs)
scaffold1379 (732-784)||(848-900)
[»] scaffold0321 (1 HSPs)
scaffold0321 (623-777)||(6788-6942)
[»] scaffold0288 (1 HSPs)
scaffold0288 (616-772)||(20907-21062)
[»] scaffold0045 (1 HSPs)
scaffold0045 (726-787)||(9427-9488)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1049-1086)||(136549-136586)
scaffold0002 (1049-1086)||(146600-146637)


Alignment Details
Target: chr6 (Bit Score: 792; Significance: 0; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 792; E-Value: 0
Query Start/End: Original strand, 19 - 1089
Target Start/End: Complemental strand, 31681484 - 31680397
Alignment:
Q  19 cgtcgtaataaagtggatttggatggagactggccagggcgtccgacgcaggtggaaggtagagtttcaaggtgacgatggagaaggaagatggaaagag 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31681484 cgtcgtaataaagtggatttggatggagactggccagggcgtccgacgcaggtggaaggtagagtttcaaggtgacgatggagaatgaagatggaaagag 31681385  T
Q  119 tgagaaagaaggaaaaa----gaacagtttaatttcatatttactaacttatttggtttactttcgaattaataatttaatttataagaaccgacaccgt 214  Q
    ||||||||||  |||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31681384 tgagaaagaaaaaaaaaaaaggaacagtttaatttcatatttactaacttatttggtttactttcgaattaataatttaatttataagaaccggcaccgt 31681285  T
Q  215 aattatttttacatatgtatctaatcaaaatcattaaacaatatcctttttaatgnnnnnnnncttatgactaatatcattttcaatgttagttctaaaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||||||||||||    
T  31681284 aattatttttacatatgtatctaatcaaaatcattaaacaatatcatttttaatgttttttttcttatgactaatatcattttcaatgttagttctaaaa 31681185  T
Q  315 tatctctacaaacatatatttgacatgatatgattgaaagtacgtgtaaaaatattttacatggtctgtacaaaaaattaatctcttgagttatgtttta 414  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31681184 tatctctacaaacatatatttaacatgatatgattgaaagtacgtgtaaaaatattttacatggtctgtacaaaaaattaatctcttgagttatgtttta 31681085  T
Q  415 tgttaatagttagtttgcattcccattagacaagccacttagccacgtattttcacaaaagggatgttcacatggtttgagcatattccaagaatatgtg 514  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31681084 tgataatagctagtttgcattcccattagacaagccacttagccacgtattttcacaaaagggatgttcacatggtttgagcaaattccaagaatatgtg 31680985  T
Q  515 ggttaataacgaataaattatggtttagggtcttactgacgcatactctcggagattgaataagaattttaaacgaagaaattattctttaaannnnnnn 614  Q
    ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||       ||||||||||||||||||||           
T  31680984 ggttaataatgaataaattatggtttagggtcttattgaggcatactctcggagactgaataagaa-------cgaagaaattattctttaaaatttttt 31680892  T
Q  615 nacaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacg 714  Q
     |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||||  ||||||||||||||||||||     
T  31680891 tacaaaagtaaacaatatttattcattcaagttgatagagtatattgatacaatacaaatctaaagtcgttaaaaaacaaaaagaatgaatatatgaaca 31680792  T
Q  715 aactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatcatttacaacatcgacgatgccaaagtc 814  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31680791 aactcacaacttccatattaatagcataaaacggcagaatacatatatttacaaatataactatattcaaatcatttacaacatcgacgatgccaaagtc 31680692  T
Q  815 attaatctcttgaattatgttttatgttcacaaggtatgaacacactccaaaaaattctgggctaatgatataataacttttcatgctatgctatcatca 914  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31680691 attaatctcttgaattatgttttatgttcacaaggtatgaacacactccaaaaaattctgggctaatgatataataacttttcatactatgctatcatca 31680592  T
Q  915 atcatcacatcaaaaattgtattttattccatatatctcacatgtcctaggtttcttacccttgacttgttctccacctat------------------- 995  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||                       
T  31680591 atcatcacatcaagaattgtattttattccatctatctcacatgtcctaggtttcttacccttgacttgttctccacctatacatatatatgtgtgtgta 31680492  T
Q  996 ---atatataaggtaccccgtactcaattcattcagaattaaaccaacnnnnnnnntggctgcaactttggtgggaggtgcatttctctctgcttct 1089  Q
       || |||||||||||  |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||    
T  31680491 tgtatgtataaggtacc--gtactcaattcattcagaattaaaccaacaaaaaaaatggctgcaactttggtgggaggtgcatttctctctgcttct 31680397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 8693323 - 8693483
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||||||||  | ||||||||||| ||||||| ||| | |||||  ||||| |||||| | ||||| |    
T  8693323 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatccaaattcact-aaaaacaaaaaggatgaatctgtgaacaa 8693421  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  8693422 actcacaacatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 8693483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 19402504 - 19402664
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| || || |||||  ||||| |||||||| ||||| |    
T  19402504 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgtt-aaaaacaaaaaggatgaatatgtgaacaa 19402602  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| |   ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  19402603 actcacagtatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 19402664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 616 - 784
Target Start/End: Original strand, 12653970 - 12654137
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||||||||||  |||||||||  ||||||   ||| || ||||| |  |||| |    
T  12653970 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaattccaaagtcgctaaaaacaaaaatga-tgaatctgcgaacaa 12654068  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | ||||| |||||||||||||||| || |||||||||  ||||||||||||||||||||||    
T  12654069 actcacatcatccatgttaatagcataaaacgacaaaatacatatgcctacaaatatgactatattcaa 12654137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 616 - 779
Target Start/End: Complemental strand, 4660897 - 4660735
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||||||||||  |||||| ||| ||||||   ||||| |||||| ||||||| |    
T  4660897 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaattccaaattcactaaaaaca-aaaaggatgaatctatgaacaa 4660799  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactata 779  Q
    ||||| | | ||||| |||||||||||||||| || | |||||||  |||||||||||| ||||    
T  4660798 actcacatcatccatgttaatagcataaaacgacaaagtacatatgcctacaaatatgattata 4660735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 23654718 - 23654559
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  23654718 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaac--aaaaggatgaatctgtgaacaa 23654621  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| |||||||||||||||||||   |||||||  |||||||||||||||    
T  23654620 actcacatcatccatgttaatagcataaaacggcaagttacatatgcctacaaatatgacta 23654559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 23101060 - 23101220
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||| ||| |||||||||||  | ||||||||||| |||||||  |  |||||||  ||||| |||||| | ||||| |    
T  23101060 acaaaaataaacgatattcattcat-caaattgatagagtacatcgatacaatacaaatccaaatccgctaaaaaacaaaaaggatgaatctgtgaacaa 23101158  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||| ||  |||||||||||||||    
T  23101159 actcacaacatccatgttaatagcataaaacggcaaagtacacatgcctacaaatatgacta 23101220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 616 - 747
Target Start/End: Complemental strand, 2488591 - 2488461
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||||||||  | ||||||||||| |||||||||||||| ||||  ||||| || |||||  |||| |    
T  2488591 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatccaaagtcatta-aaaacaaaaaggataaatatgcgaacaa 2488493  T
Q  716 actcagaacttccatattaatagcataaaacg 747  Q
    ||| | ||| || || ||||||||||||||||    
T  2488492 acttacaacatctatgttaatagcataaaacg 2488461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 1106515 - 1106679
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcatta---aaaaattaaaagaatgaatatatgaa 712  Q
    |||||| ||||| ||||| |||||||||  |||||||||||  | ||||||||||| ||||||| ||  ||   |||||  ||||| |||||| | ||||    
T  1106515 acaaaaataaacgatattcattcattcagattgatagagtacatcgatacaatacaaatccaaattcgctagctaaaaacgaaaaggatgaatttctgaa 1106614  T
Q  713 cgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    | |||||| | | ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  1106615 caaactcacatcatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 1106679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 15589777 - 15589937
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||| | ||||||| |   ||||||   ||||| |||||| | ||||| |    
T  15589777 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaatccaaatttgctaaaaaca-aaaaggatgaatctgtgaacca 15589875  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| | ||| |||| |||||||||||||||    
T  15589876 actcacagcatccatgttaatagcataaaacggcaaagtacgtatacctacaaatatgacta 15589937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 21507506 - 21507666
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||||||||||  ||||||||||  |  |||||||||| ||||||| ||  ||||||   ||||| |||||||| ||||| |    
T  21507506 acaaaaataaacgatattcattcattcaaactgatagagtacatcaatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatatgtgaacaa 21507604  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  21507605 actcacatcatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 21507666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 616 - 784
Target Start/End: Original strand, 12481031 - 12481198
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| ||||||| |   ||||||   ||||| |||||| | ||||| |    
T  12481031 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaatttgctaaaaacaaaaaag-atgaatctgtgaacaa 12481129  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | ||||| |||||||||||||||||||   ||| |||  ||||||||||||||||||||||    
T  12481130 actcacatcatccatgttaatagcataaaacggcaaggtacctatgcctacaaatatgactatattcaa 12481198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 30813526 - 30813359
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| || |||| ||  | |||||  ||||| |||||| | ||||| |    
T  30813526 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 30813428  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | ||||| |||||||||||||||| ||   ||| |||  ||||||||||||||||||||||    
T  30813427 actcacatcatccatgttaatagcataaaacgccaaggtacctatgcctacaaatatgactatattcaa 30813359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 616 - 784
Target Start/End: Original strand, 9043782 - 9043951
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| | ||| ||||||||||| | || |||||||||||| | ||||| ||||| | |||||||| || |||||| ||||  ||| |||| ||||| |    
T  9043782 acaaaaattaacgatatttattcaattaaattgatagagtatatcgatacgatacaaaaccaaagtcgtt-aaaaataaaaatgatggatatgtgaacaa 9043880  T
Q  716 actcagaacttccatattaatagcataaaacggcag--aatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | ||||| |||||| |||||||||| ||  || ||||||| ||||||||||||| ||||||||    
T  9043881 actcaaagcatccatgttaatatcataaaacggtagataacacatatacctacaaatatgacaatattcaa 9043951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 623 - 786
Target Start/End: Original strand, 8978415 - 8978577
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||||| ||| ||||||||||  ||||||||||| || |||||||||| || |||||||   |||||   |||||| ||||  |  |||| |||||| |    
T  8978415 taaacaacattcattcattcaaactgatagagtatattaatacaatacaaattcaaagtcgccaaaaacaaaaaaga-tgaaattgcgaacaaactcaca 8978513  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    || ||||| || ||| ||||||||| || | |||||||  ||||||||||||||||||||||||    
T  8978514 acatccatgttcataacataaaacgacatagtacatatgcctacaaatatgactatattcaaat 8978577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 637 - 783
Target Start/End: Original strand, 14782828 - 14782973
Alignment:
Q  637 tcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaat 736  Q
    |||||||| |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |||||| |   ||||| |||||    
T  14782828 tcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaaactcacattatccatgttaat 14782926  T
Q  737 agcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||||||| |||| | ||| |||  |||||||||||||||||||||    
T  14782927 agcataaaatggcaaagtacctatgcctacaaatatgactatattca 14782973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 616 - 750
Target Start/End: Original strand, 35219565 - 35219698
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| ||| |||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  35219565 acaaaaataaacgatattcattcattcaaattggtagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 35219663  T
Q  716 actcagaacttccatattaatagcataaaacggca 750  Q
    ||||||| | || || |||||||||||||||||||    
T  35219664 actcagagcatcaatgttaatagcataaaacggca 35219698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 629 - 777
Target Start/End: Complemental strand, 4394226 - 4394079
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||  ||||||||||||| ||||||| |   | |||||  ||| | |||||| | ||||| |||||  ||| |||    
T  4394226 atattcattcattcaaattgatagagtacattgatacaatacaaatccaaatttgct-aaaaacaaaacggatgaatctgtgaacaaactctcaacatcc 4394128  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || ||||||||||||||||||| | ||  |||  |||||||||||||||    
T  4394127 atgttaatagcataaaacggcaaagtatctatgcctacaaatatgacta 4394079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 732 - 784
Target Start/End: Original strand, 20028482 - 20028534
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||||| |||||||||||||||| ||||  ||||||||||||||||||||||    
T  20028482 ttaatagtataaaacggcagaatatatatgcctacaaatatgactatattcaa 20028534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 694 - 786
Target Start/End: Complemental strand, 20845390 - 20845293
Alignment:
Q  694 aaaagaatgaatatatgaac-gaac----tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||||||||||||||||| ||||    ||| ||| ||||| |||||||||||||||| || | |||| || |||||||||||||||||||| ||||    
T  20845390 aaaagaatgaatatatgaacagaacagactcacaacatccatgttaatagcataaaacgacaaagtacaaatgtctacaaatatgactatatttaaat 20845293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 732 - 784
Target Start/End: Complemental strand, 29285088 - 29285036
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| |||||||||| ||| |||||||| ||||||||||||||||||||||    
T  29285088 ttaataacataaaacggaagagtacatatagctacaaatatgactatattcaa 29285036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 710 - 784
Target Start/End: Complemental strand, 20496554 - 20496480
Alignment:
Q  710 gaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||| |||||| ||| ||||||||||||||||||||||||| | |||| |   ||||| ||||||||||||||||    
T  20496554 gaacaaactcacaacatccatattaatagcataaaacggcaaagtacaaaagcctacacatatgactatattcaa 20496480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 787
Target Start/End: Complemental strand, 31748334 - 31748241
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| | ||||| | |||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  31748334 aaaaggatgaatctgtgaacaagctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 31748241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 702 - 778
Target Start/End: Complemental strand, 15176175 - 15176099
Alignment:
Q  702 gaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactat 778  Q
    |||||||| ||| |||||| ||| | ||| |||||| |||||||||| ||| |||||||  ||||||||||||||||    
T  15176175 gaatatataaacaaactcataacattcatgttaatatcataaaacggtagagtacatattcctacaaatatgactat 15176099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 702 - 778
Target Start/End: Original strand, 15469993 - 15470069
Alignment:
Q  702 gaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactat 778  Q
    |||||| ||||| |||| | ||| ||||| |||||| |||||||||| ||| |||||||  ||||||||||||||||    
T  15469993 gaatatgtgaacaaacttacaacatccatgttaatatcataaaacggtagagtacatattcctacaaatatgactat 15470069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 694 - 789
Target Start/End: Complemental strand, 34020980 - 34020885
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatcat 789  Q
    ||||| |||||| | ||||| |||||| | | | ||| |||||||||||||||| || | ||||||   ||||||||||||||||||| |||||||    
T  34020980 aaaaggatgaatctgtgaacaaactcacatcatacatgttaatagcataaaacgacaaagtacataagcctacaaatatgactatattaaaatcat 34020885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 774
Target Start/End: Original strand, 6295901 - 6296058
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| |||| |||||| |||||||||| |||||||||||  | ||||||||||| || |||| |   ||||||   ||| ||  ||||   ||||| |    
T  6295901 acaaaaataaataatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaaatgac-gaatccgtgaacaa 6295999  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatga 774  Q
    ||||| ||| ||||| |||||| |||||||||||| | ||| ||| |||||||||||||    
T  6296000 actcacaacatccatgttaataacataaaacggcaaagtacttatgtctacaaatatga 6296058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 774
Target Start/End: Original strand, 6302711 - 6302868
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| |||| |||||| |||||||||| |||||||||||  | ||||||||||| || |||| |   ||||||   ||| ||  ||||   ||||| |    
T  6302711 acaaaaataaataatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaaatgac-gaatccgtgaacaa 6302809  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatga 774  Q
    ||||| ||| ||||| |||||| |||||||||||| | ||| ||| |||||||||||||    
T  6302810 actcacaacatccatgttaataacataaaacggcaaagtacttatgtctacaaatatga 6302868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 618 - 679
Target Start/End: Original strand, 6419533 - 6419594
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaa 679  Q
    |||||||||| ||||| |||||||||| |||||||| ||  | ||||||||||| |||||||    
T  6419533 aaaagtaaacgatattcattcattcaaattgatagactacatcgatacaatacaaatccaaa 6419594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 13233845 - 13233938
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||||| |||||   |||| ||| ||||| |||||||||||||||| || ||||||  |  ||||| ||||||||||||| |||||    
T  13233845 aaaaggatgaatatgtgaacaggctcacaacatccatgttaatagcataaaacgacaaaatacagttgcctacacatatgactatatttaaatc 13233938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 717 - 786
Target Start/End: Complemental strand, 16913679 - 16913610
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| ||||    
T  16913679 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaat 16913610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 747
Target Start/End: Original strand, 29920646 - 29920699
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacg 747  Q
    ||||| |||||| ||||||| |||||| ||| ||||| ||||||||||||||||    
T  29920646 aaaaggatgaatctatgaacaaactcacaacatccatgttaatagcataaaacg 29920699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 31705634 - 31705474
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||||||| || |||||||||||  | ||||||||||| || |||| |   | |||||| ||||| || ||| | ||||| |    
T  31705634 acaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattcaaattggct-aaaaataaaaaggataaatctgtgaacaa 31705536  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| || || |||||||||||||||  || | ||| |||  |||||||||||||||    
T  31705535 actcacaacatctatgttaatagcataaaacaacaaagtacctatgcctacaaatatgacta 31705474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 1e-28; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 39179497 - 39179657
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| ||||||| ||  ||||||   |||||||||||| ||||||| |    
T  39179497 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaagaatgaatttatgaacaa 39179595  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||||||||||||| || | ||||||||||||||||||||||||    
T  39179596 actcacaacatccatgttaatagcataaaacgacaaagtacatatatctacaaatatgacta 39179657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 26294079 - 26293919
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| | ||||||||| || ||||||||||| || |||| ||  ||||||   ||||| |||||||| ||||| |    
T  26294079 acaaaaataaacgatattcattcattcaaatagatagagtacgtcgatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatatgtgaacaa 26293981  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||||||||||||||||||||||| | ||| |||  |||||||||||||||    
T  26293980 actcacaacatccatattaatagcataaaacggcaaagtacttatgcctacaaatatgacta 26293919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 616 - 784
Target Start/End: Original strand, 11734497 - 11734664
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| || |||| ||  ||||||   ||||| |||||||| ||||| |    
T  11734497 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatatgtgaacaa 11734595  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| |||  |||| ||||||||||||||||||| | |||||||  ||||||||||||||||||||||    
T  11734596 actcacaacaaccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactatattcaa 11734664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 618 - 777
Target Start/End: Complemental strand, 6281511 - 6281353
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||||||||| ||||| |||||||||| |||||||||||| | ||||||||||| || |||| ||  ||||||   ||||| |||||| | ||||| |||    
T  6281511 aaaagtaaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatctgtgaacaaac 6281413  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| | | ||||| ||||||||||||||| ||| |||||||||  |||||||||||||||    
T  6281412 tcacatcatccatgttaatagcataaaacagcaaaatacatatgcctacaaatatgacta 6281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 635 - 777
Target Start/End: Original strand, 2555021 - 2555162
Alignment:
Q  635 attcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatatta 734  Q
    |||||||||| |||||||||||  | ||||||||||| ||||||| |  |||||||   ||||| |||||||| ||||| |||||| ||| ||||| |||    
T  2555021 attcattcaaattgatagagtacatcgatacaatacaaatccaaatttcttaaaaaca-aaaaggatgaatatgtgaacaaactcacaacatccatgtta 2555119  T
Q  735 atagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| |||||||||| |||||||||  |||||||||||||||    
T  2555120 atagcgtaaaacggcaaaatacatatgcctacaaatatgacta 2555162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 17331797 - 17331637
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  17331797 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 17331699  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| |  |||||| |||||||||||||||||||  |||| |||  |||||||||||||||    
T  17331698 actcacatattccatgttaatagcataaaacggcaagatacctatgcctacaaatatgacta 17331637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 623 - 783
Target Start/End: Complemental strand, 3740794 - 3740634
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| |||||||||||  |||||||||| || || |||| ||  ||||||   ||| |||||||| ||||||| |||||| |    
T  3740794 taaacgatattcattcattcaaattgatagagtacattgatacaatccaaattcaaattcgctaaaaacaaaaaggaatgaatctatgaacaaactcaca 3740695  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    || ||||| ||| ||||||||| ||||| | ||| |||  ||| |||||||||||||||||    
T  3740694 acatccatgttactagcataaagcggcaaagtacctatgcctataaatatgactatattca 3740634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 17732039 - 17732198
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaaga-atgaatatatgaacg 714  Q
    |||||| ||||  ||||| | |||||||| |||||||||||  | ||||||||||| ||||||| ||| ||||||    ||||| |||||| | |||||     
T  17732039 acaaaaataaatgatattcactcattcaaattgatagagtacatcgatacaatacaaatccaaattcactaaaaac---aaagagatgaatctgtgaaca 17732135  T
Q  715 aactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||| ||| ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  17732136 aactcacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 17732198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 17700022 - 17699862
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||| | |||| |||||||||||  | ||||||| ||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  17700022 acaaaaataaacgatattcattgaatcaaattgatagagtacatcgatacaaaacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 17699924  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | ||| ||| ||||||||||||||||    
T  17699923 actcacaacatccatgttaatagcataaaacggcaaagtacctatgtctacaaatatgacta 17699862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 26294726 - 26294886
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| |||||  |||| |||||||||| |||||||||||| | ||||||||||| ||| ||| ||  | |||||  ||||  |||||| | ||||| |    
T  26294726 acaaaaataaacggtattcattcattcaaattgatagagtatatcgatacaatacaaatctaaattcgct-aaaaacaaaaatgatgaatctgtgaacaa 26294824  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| ||||| |||  |||||||||||||||    
T  26294825 actcacatcatccatgttaatagcataaaacggcaaaatacttatgcctacaaatatgacta 26294886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 39531060 - 39531224
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcatta---aaaaattaaaagaatgaatatatgaa 712  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||||||||   ||||||| ||  ||   |||||  ||||| |||||| | ||||    
T  39531060 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatatgaatccaaattcgctagctaaaaacgaaaaggatgaatttgtgaa 39531159  T
Q  713 cgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    | |||||| | | ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  39531160 caaactcacatcatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 39531224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 17095893 - 17096053
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| | ||| |||||||||| |||||||||||  | ||||||||||| || |||| ||  ||||||   ||||| |||||| | ||||| |    
T  17095893 acaaaaataaacgacattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 17095991  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  17095992 actcacatcatccatgttaatagcataaaacggcaaagtacttatgcctacaaatatgacta 17096053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 18654251 - 18654091
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||| | ||||| |||||||||| |||||||| ||  ||||||||||| | ||||||| ||  ||||||   ||||| || ||| | ||||| |    
T  18654251 acaaaaataagcgatattcattcattcaaattgatagactacattgatacaatataaatccaaattcgctaaaaaca-aaaaggataaatttgtgaacaa 18654153  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| ||||| |||  |||||||||||||||    
T  18654152 actcacagcatccatgttaatagcataaaacggcaaaatacttatgcctacaaatatgacta 18654091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 20483655 - 20483495
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| || ||||||||  | |||| |||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  20483655 acaaaaataaacgatattcattcattcaaattaatagagtacatcgatataatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 20483557  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||||||||||| || | | |||||||  |||||||||||||||    
T  20483556 actcacaacatccatgttaatagcataaaatggaaaagtacatatgcctacaaatatgacta 20483495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 7151265 - 7151098
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||||||| || | |||||||||  ||||||||||||| || ||||||| |||||||   ||||| ||||||  | |||| |    
T  7151265 acaaaaataaacgatattcattcattaaaatcgatagagtaaattgatacaatacaaattcaaagtcgttaaaaacaaaaaag-atgaatccacgaacaa 7151167  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||||  |  |||| |||||| ||||||||| || | |||||| | ||||||| ||||||||||||||    
T  7151166 actcagtgcaaccatgttaataacataaaacgacaaagtacataaacctacaaacatgactatattcaa 7151098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 629 - 777
Target Start/End: Complemental strand, 28041085 - 28040938
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||| | ||||||||||| ||||||| |   | |||||  ||||| |||||||| |||   |||||| | | |||    
T  28041085 atattcattcattcaaattgatagagtatatcgatacaatacaaatccaaatttgct-aaaaacaaaaaggatgaatatgtgagtaaactcacatcatcc 28040987  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || ||| ||||||||||||||| | |||||||  |||||||||||||||    
T  28040986 atgttagtagcataaaacggcaaagtacatatgcctacaaatatgacta 28040938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 687 - 777
Target Start/End: Original strand, 980748 - 980841
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatatt---aatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||| ||||| |||||||| ||||| |||||| ||| ||||| ||   ||||||||||||||||| |||||||||  |||||||||||||||    
T  980748 aaaaataaaaaggatgaatatgtgaacaaactcacaacatccatgttgttaatagcataaaacggcaaaatacatatgcctacaaatatgacta 980841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 616 - 747
Target Start/End: Complemental strand, 42781470 - 42781340
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||||||| |||||| ||||||||||   | ||||||||||| || |||||||  | |||||| ||||| |||||| | | ||| |    
T  42781470 acaaaaataaacgatatttatttattcaaattgatagagtgcatcgatacaatacaaattcaaagtcgct-aaaaataaaaaggatgaatttgttaacaa 42781372  T
Q  716 actcagaacttccatattaatagcataaaacg 747  Q
    ||||| ||| ||||| ||||||||||||||||    
T  42781371 actcacaacatccatgttaatagcataaaacg 42781340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 23881768 - 23881928
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||   ||||||  ||||| |||||| | || || |    
T  23881768 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattc-gcaaaaaagaaaaaggatgaatttgtggacaa 23881866  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||| || || | ||  |||  |||||||||||||||    
T  23881867 actcacaacatccatgttaatagcataaaccgacaaagtatctatgactacaaatatgacta 23881928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 694 - 786
Target Start/End: Original strand, 6074473 - 6074565
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    ||||| |||||| ||||||| |||||| ||| ||||| ||||||||| ||||||||| |  |||||  |||||||| ||||||||||| ||||    
T  6074473 aaaaggatgaatctatgaacaaactcacaacatccatgttaatagcacaaaacggcatagaacataagtctacaaacatgactatattaaaat 6074565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 696 - 787
Target Start/End: Original strand, 20145958 - 20146049
Alignment:
Q  696 aagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||||||||||| ||||| |||||| ||| || || |||||||||||||| | || | ||||||   ||||||||||||||||||| |||||    
T  20145958 aagaatgaatatgtgaacaaactcacaacatcaatgttaatagcataaaatgacaaagtacataagcctacaaatatgactatattaaaatc 20146049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 616 - 783
Target Start/End: Original strand, 32347375 - 32347541
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| |||| || |||  | ||||||||||  || |||| ||  ||||||   ||| | |||||| | ||||| |    
T  32347375 acaaaagtaaacgatattcattcattcaaattgacagtgtacatcgatacaatacgaattcaaattcgctaaaaaca-aaatggatgaatctgtgaacaa 32347473  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    |||||  || ||||| ||||||||||||||||||| | ||  |||  |||||||||||||||||||||    
T  32347474 actcaatacatccatgttaatagcataaaacggcaaagtagttatgcctacaaatatgactatattca 32347541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 623 - 789
Target Start/End: Original strand, 39415926 - 39416090
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| |||||||||||||||| |||||  ||||  | ||||||||||| || |||||||  |  ||||  | ||| ||||||||   ||| |||||| |    
T  39415926 taaacgatatttattcattcaaattgattaagtacatcgatacaatacatattcaaagtcgctggaaaa--agaaggatgaatattcaaacaaactcaca 39416023  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatcat 789  Q
    |  ||||| ||||||||| |||| | |||| |||||||  ||||||||||||||||||||| |||||    
T  39416024 aaatccattttaatagcaaaaaatgacagagtacatatgcctacaaatatgactatattcatatcat 39416090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 616 - 750
Target Start/End: Original strand, 7771473 - 7771606
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||| ||||  | ||||||||||| ||| ||| ||  | |||||  ||||| |||||| | ||||| |    
T  7771473 acaaaaataaacgatatttattcattcaaattgatatagtacatcgatacaatacaaatctaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 7771571  T
Q  716 actcagaacttccatattaatagcataaaacggca 750  Q
     |||| | | ||||| |||||||||||||||||||    
T  7771572 gctcacatcatccatgttaatagcataaaacggca 7771606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 618 - 748
Target Start/End: Original strand, 42396164 - 42396293
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||| ||| | ||||||||||| ||||||| ||| | |||||  ||| | || ||||| ||||| |||    
T  42396164 aaaaataaacgatattcattcattcaaattgatagaatatatcgatacaatacaaatccaaattcact-aaaaacaaaagggattaatatgtgaacaaac 42396262  T
Q  718 tcagaacttccatattaatagcataaaacgg 748  Q
    ||| ||| | ||| |||||| ||||||||||    
T  42396263 tcacaacattcatgttaataacataaaacgg 42396293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 629 - 750
Target Start/End: Original strand, 177769 - 177889
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| ||||| |||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |||||| ||| |||    
T  177769 atattcattcattcaaattgatggagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaaactcacaacatcc 177867  T
Q  729 atattaatagcataaaacggca 750  Q
    || |||||||| ||||||||||    
T  177868 atgttaatagcctaaaacggca 177889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 715 - 784
Target Start/End: Original strand, 39532099 - 39532168
Alignment:
Q  715 aactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| ||| || || |||||||||||||||||  || |||||||  ||||||||||||||||||||||    
T  39532099 aactcacaacatcaattttaatagcataaaacggtcgagtacatatgcctacaaatatgactatattcaa 39532168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 732 - 784
Target Start/End: Complemental strand, 14535237 - 14535185
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||||| ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  14535237 ttaataggataaaacggcagagtacatatgtctataaatatgattatattcaa 14535185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 732 - 784
Target Start/End: Complemental strand, 29098134 - 29098082
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||||||||||||||||   |||||||  ||||||||||||||||||||||    
T  29098134 ttaatagcataaaacggcaaggtacatatgcctacaaatatgactatattcaa 29098082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 752
Target Start/End: Complemental strand, 32309965 - 32309830
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||| |||| | || ||||||| || |||||| ||||  |||||| |  |||| |    
T  32309965 acaaaaataaacgatattgattcattcaaattgatagagtacatcgatataatataaattcaaagtcgtt-aaaaataaaaaagatgaatctgcgaacaa 32309867  T
Q  716 actcagaacttccatattaatagcataaaacggcaga 752  Q
    ||||| ||| ||||| ||||||| |||||||| ||||    
T  32309866 actcacaacatccatgttaataggataaaacgacaga 32309830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 694 - 781
Target Start/End: Complemental strand, 20271091 - 20271004
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||||||||||| | ||||| |||||| ||| ||||| |||||||||||||||| || | |||  |  |||||| |||||||||||||    
T  20271091 aaaagaatgaatctgtgaacaaactcacaacatccatgttaatagcataaaacgacaaagtactaaagtctacacatatgactatatt 20271004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 694 - 781
Target Start/End: Complemental strand, 23428635 - 23428548
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| || ||||| ||||| |||||| | | ||||| ||||||||||||||||| | | ||| |||  |||||||||||||||||||    
T  23428635 aaaaggataaatatgtgaacaaactcacatcatccatgttaatagcataaaacggaaaagtacctatgcctacaaatatgactatatt 23428548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 710 - 781
Target Start/End: Complemental strand, 27241431 - 27241360
Alignment:
Q  710 gaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||| |||||| ||| ||||  ||||||||||||||||||| ||||| ||   |||||||||||||||||||    
T  27241431 gaacaaactcacaacatccacgttaatagcataaaacggcaaaatacctaggcctacaaatatgactatatt 27241360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 616 - 679
Target Start/End: Complemental strand, 34431533 - 34431470
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaa 679  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| |||||||    
T  34431533 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaa 34431470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 700 - 787
Target Start/End: Original strand, 40564900 - 40564987
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||||| | ||||| |||||| ||| || || |||||||||||||||| || | ||||||   ||||||||||||||||||| |||||    
T  40564900 atgaatttgtgaacaaactcacaacatctatgttaatagcataaaacgacaaagtacataagcctacaaatatgactatattaaaatc 40564987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 686 - 783
Target Start/End: Complemental strand, 1419414 - 1419317
Alignment:
Q  686 aaaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    |||||| |||||| | ||||||  |||| |||||| ||  | ||| ||||||| ||||||| |||| ||||||||  ||||||||| |||||||||||    
T  1419414 aaaaaaataaaagtacgaatattcgaacaaactcacaatatacatgttaatagaataaaactgcagcatacatatgcctacaaatacgactatattca 1419317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 709 - 774
Target Start/End: Original strand, 3079078 - 3079143
Alignment:
Q  709 tgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatga 774  Q
    ||||| |||||| | | ||||| |||||| |||||||||||| |||||||||  ||||||||||||    
T  3079078 tgaacaaactcacagcatccatgttaataacataaaacggcaaaatacatatgcctacaaatatga 3079143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 6635717 - 6635557
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| || || |||||||||| |||||||||||  | ||||||||| | || |||| || || |||||  ||||| |||||| | ||||| |    
T  6635717 acaaaaataaacgattttcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgtt-aaaaacaaaaaggatgaatctgtgaacaa 6635619  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| |   |||||  ||||||||||||||| || | ||| |||  |||||||||||||||    
T  6635618 actcacagtatccatgataatagcataaaacgacaaagtacctatgcctacaaatatgacta 6635557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 625 - 682
Target Start/End: Original strand, 17566131 - 17566188
Alignment:
Q  625 aacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtc 682  Q
    |||||||||||||||||||| |||||||| ||  ||||||| ||||| || |||||||    
T  17566131 aacaatatttattcattcaaattgatagattacattgatactatacaaattcaaagtc 17566188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 1e-25; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 636 - 784
Target Start/End: Complemental strand, 2148189 - 2148042
Alignment:
Q  636 ttcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaa 735  Q
    ||||||||| ||||||||||| |||||||||||| | || |||||||| || |||   ||||| |||||| |  |||| |||||| ||| ||||||||||    
T  2148189 ttcattcaaattgatagagtacgttgatacaatataaattcaaagtcactataaaca-aaaaggatgaatttgcgaacaaactcacaacatccatattaa 2148091  T
Q  736 tagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||||||||||||| | |||| || |||||||||||||||||||||||    
T  2148090 tagcataaaacggcaaagtacaaatgtctacaaatatgactatattcaa 2148042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 40012932 - 40013092
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||||||||| | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||| | |    
T  40012932 acaaaaataaacgatatttattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgatcaa 40013030  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||||||||||||||||   |||||||  |||||||||||||||    
T  40013031 actcacaacatccatgttaatagcataaaacggcaacgtacatatccctacaaatatgacta 40013092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 616 - 784
Target Start/End: Original strand, 44984525 - 44984692
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||  ||||||| || |||||||||||| ||||||||||||| || |||| ||  ||||||   ||| | || || ||  |||| |    
T  44984525 acaaaaataaacgatatccattcatttaaattgatagagtatattgatacaatacaaattcaaaatctctaaaaaca-aaagggataaacatgcgaacaa 44984623  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||||| | ||||||||||||| ||||||| | ||| |||||||||||||||||||||||||||||||    
T  44984624 actcagagcatccatattaatagtataaaacagaagagtacatatatctacaaatatgactatattcaa 44984692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 616 - 783
Target Start/End: Original strand, 30155950 - 30156116
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||| | |||||||||| |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||| ||| |||||| ||||| |    
T  30155950 acaaaaataaacgatactcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaaaggaa-gaatatgtgaacaa 30156048  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| ||| ||||| |||||||||||||||| || | || ||||  |||||||||||||||||||||    
T  30156049 actcacaacatccatgttaatagcataaaacgacaaagtatatatgcctacaaatatgactatattca 30156116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 618 - 777
Target Start/End: Original strand, 54706394 - 54706552
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||||||  | | ||||||||| ||||| | ||  ||||||   |||||| ||||||| ||||| |||    
T  54706394 aaaaataaacgatattcattcattcaaattgatagagtacatcgttacaatacaaatccatattcgctaaaaacaaaaaaga-tgaatatgtgaacaaac 54706492  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| ||| ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  54706493 tcacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 54706552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 623 - 777
Target Start/End: Original strand, 1074561 - 1074714
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| |||||||||||  | |||| |||||| ||||||| ||  ||||||   ||||| |||||||| ||||| |||||| |    
T  1074561 taaacgatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaaca-aaaaggatgaatatgtgaacaaactcaca 1074659  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
     | ||||| ||||||||||||||||||| | || |||| ||||||||||||||||    
T  1074660 tcatccatgttaatagcataaaacggcaaagtaaatatgtctacaaatatgacta 1074714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 11819553 - 11819392
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcatta-aaaaattaaaagaatgaatatatgaacg 714  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  || |||||  ||||| |||||||| |||||     
T  11819553 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctataaaaacaaaaaggatgaatatgtgaaca 11819454  T
Q  715 aactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||| | | ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  11819453 aactcacatcatccatgttaatagcataaaacggca-agtacctatgcctacaaatatgacta 11819392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 13701662 - 13701822
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| || |||| ||  ||||||   ||||| |||||| | ||||| |    
T  13701662 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatctttgaacaa 13701760  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  13701761 actcacaacatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 13701822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 616 - 780
Target Start/End: Original strand, 105708 - 105870
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||||||||| |||||||||| |||||||||||  ||||||||||||| || |||||||| | || ||  ||||| |||||| |  |||| |    
T  105708 acaaaaataaacaatattcattcattcaaattgatagagtacattgatacaatacaaat-caaagtcact-aagaacaaaaaggatgaatctccgaacaa 105805  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatat 780  Q
    ||||| | | ||||| |||||||||||||||| || | ||| |||  ||||||||||||||||||    
T  105806 actcacatcatccatgttaatagcataaaacgacaaagtacctatgcctacaaatatgactatat 105870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 616 - 784
Target Start/End: Original strand, 41867993 - 41868159
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||  |||||||||| |||||||||||  | ||||||||||| || |||| ||  ||||||   ||||| |||||||| ||||| |    
T  41867993 acaaaaataaacgatatgcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatatgtgaacaa 41868091  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | || || ||||||||||||||||||| | ||| ||| |||||||||||||||||||||||    
T  41868092 actcacaccatc-atgttaatagcataaaacggcaaagtacctatgtctacaaatatgactatattcaa 41868159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 616 - 783
Target Start/End: Complemental strand, 55455331 - 55455165
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  ||||||||||||| || |||| ||  ||||||   | ||| |||||| | ||||  |    
T  55455331 acaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaattcaaattcgctaaaaaca-agaaggatgaatctgtgaataa 55455233  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| | | ||||| ||||||||||||||||||| | |||||||   ||||||||||||||||||||    
T  55455232 actcacatcatccatgttaatagcataaaacggcaaagtacatatgcttacaaatatgactatattca 55455165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 33637863 - 33637696
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  33637863 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 33637765  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | ||||| |||||||||||||| ||||   ||| |||  ||||||||||||||||||||||    
T  33637764 actcacatcatccatgttaatagcataaaatggcaaggtacctatgcctacaaatatgactatattcaa 33637696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 623 - 783
Target Start/End: Original strand, 40883542 - 40883701
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||||||||| |||||||||| |||||||||||  ||||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |||||| |    
T  40883542 taaacaatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaaactcaca 40883640  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
     | ||| | |||||||||||||||| || | |||  |   |||||||||||||||||||||    
T  40883641 tcatccgtgttaatagcataaaacgacaaagtacccaagcctacaaatatgactatattca 40883701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 618 - 777
Target Start/End: Original strand, 4206221 - 4206374
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| |||||||| || |||||||||| |||||||||||| | ||||||||| | ||||||| || |||||| |     ||| | ||| ||||||| |||    
T  4206221 aaaaataaacaatgttcattcattcaaattgatagagtatatcgatacaatataaatccaaattcgttaaaata-----aga-taaatttatgaacaaac 4206314  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| ||| ||||||||||||| ||||||||||| | |||||||   ||||||||||||||    
T  4206315 tcacaacatccatattaatagtataaaacggcaaagtacatatgcttacaaatatgacta 4206374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 624 - 783
Target Start/End: Original strand, 4817548 - 4817706
Alignment:
Q  624 aaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaa 723  Q
    ||||||||||||||||||||| |||||||||||  ||| ||||||| | || |||| || || |||||  ||||| |||||||| ||||| |||||| ||    
T  4817548 aaacaatatttattcattcaaattgatagagtacattggtacaatataaattcaaattcgtt-aaaaacaaaaagcatgaatatgtgaacaaactcacaa 4817646  T
Q  724 cttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    | ||||| ||||||| |||||| || | | ||| |||  | | |||||||||||||||||    
T  4817647 catccatgttaatagtataaaatggaaaagtacttatgccaataaatatgactatattca 4817706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 618 - 781
Target Start/End: Complemental strand, 48401559 - 48401397
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||||||  | ||||||||| | || |||| ||  |||||| | ||||| |||||| | ||||| |||    
T  48401559 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaa-taaaaaggatgaatctgtgaacaaac 48401461  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||| | | ||||| ||||||||||| ||| ||| | |||||||  |||||||||||||||||||    
T  48401460 tcacatcatccatgttaatagcatataacagcaaagtacatatgcctacaaatatgactatatt 48401397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 28995046 - 28995139
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| ||||||| |||||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  28995046 aaaaggatgaatctatgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 28995139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 618 - 783
Target Start/End: Original strand, 31462417 - 31462581
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||||||||| ||||| |||||||||| |||||| ||||  | ||||||||||| ||  ||| ||  ||||||   ||| || |||||||  |||| |||    
T  31462417 aaaagtaaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatttaaattcgctaaaaacaaaaatga-tgaatatgcgaacaaac 31462515  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||| ||| ||||| ||||||| ||||||||||| | |||||||  |||||||||||| ||||||||    
T  31462516 tcaaaacatccatgttaatagaataaaacggcaaagtacatatgcctacaaatatgattatattca 31462581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 48855346 - 48855186
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | || |||||||| ||||||| ||  | |||||  ||||| |||||| ||||||  |    
T  48855346 acaaaaataaacgatattaattcattcaaattgatagagtacatcgaaacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctatgaataa 48855248  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||| ||||||||||||   ||| |||  |||||||||||||||    
T  48855247 actcacaacatccatgttaataacataaaacggcaatgtacctatgcctacaaatatgacta 48855186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 618 - 750
Target Start/End: Complemental strand, 2192545 - 2192414
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| || |||| ||  |||||| | ||||| |||||| | ||||| ||     
T  2192545 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaa-taaaaaggatgaatctgtgaacaaat 2192447  T
Q  718 tcagaacttccatattaatagcataaaacggca 750  Q
    ||| ||| ||||| |||||||||||||||||||    
T  2192446 tcacaacatccatgttaatagcataaaacggca 2192414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 629 - 777
Target Start/End: Complemental strand, 4082164 - 4082017
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  |||||    ||||| |||||| | | ||| |||||| ||| |||    
T  4082164 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaacca-aaaaggatgaatctgtaaacaaactcacaacatcc 4082066  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || ||||||||||||||||| | | |||||||  |||||||||||||||    
T  4082065 atgttaatagcataaaacggaaaagtacatatggctacaaatatgacta 4082017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 709 - 784
Target Start/End: Complemental strand, 3312804 - 3312729
Alignment:
Q  709 tgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| || ||| ||| ||||| ||||||||||||||||||| ||||| |||  ||||||||||||||||||||||    
T  3312804 tgaacaaagtcacaacatccatgttaatagcataaaacggcaaaatacctatgcctacaaatatgactatattcaa 3312729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 616 - 783
Target Start/End: Original strand, 49627764 - 49627930
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||| | ||||||| ||  ||||||   ||| | |||||| | ||||| |    
T  49627764 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaaca-aaatggatgaatttgtgaacaa 49627862  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
     | || | | ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||||||||    
T  49627863 tcccacatcatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgactatattca 49627930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 618 - 772
Target Start/End: Complemental strand, 3457389 - 3457236
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| ||||||| || |||||||||||  ||||||||||||| ||||||| ||  | |||||  ||||  |||||| |  |||| |||    
T  3457389 aaaaataaacgatattcattcatttaaattgatagagtacattgatacaatacaaatccaaattcgct-aaaaacaaaaatgatgaatttgcgaacaaac 3457291  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatat 772  Q
    ||| ||| ||||| |||||||||||||||| || | |||||||  ||||||||||    
T  3457290 tcacaacatccatgttaatagcataaaacgacaaagtacatatgcctacaaatat 3457236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 14585931 - 14585771
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  |  |||||||||| || |||| ||  ||||||   ||||| |||||| | ||| | |    
T  14585931 acaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatctgtgagcaa 14585833  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||   | ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  14585832 actcacggcatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 14585771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 24483356 - 24483516
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||| |||||| ||||||| ||  | |||||| ||||| || ||  | ||||| |    
T  24483356 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatagaatacaaatccaaattcgct-aaaaataaaaaggataaacctgtgaacaa 24483454  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||| |||||||||||| | | | |||  |||||||||||||||    
T  24483455 actcacaacatccatgttaatatcataaaacggcaaagtccttatgcctacaaatatgacta 24483516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 53155090 - 53155250
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||||||| || |||||||||||  | ||||||||||| || |||| ||  ||||||   ||| |||| ||| | ||||| |    
T  53155090 acaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaaatgaat-aatctgtgaacaa 53155188  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||||| ||||| |||| | |||||||  |||||||||||||||    
T  53155189 actcacaacatccatgttaatagcgtaaaaaggcaaagtacatatgcctacaaatatgacta 53155250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1049 - 1089
Target Start/End: Complemental strand, 11149552 - 11149512
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgcttct 1089  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  11149552 tggctgcaactttggttggaggtgcatttctctctgcttct 11149512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 616 - 784
Target Start/End: Original strand, 48652109 - 48652276
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||  ||||| |||||||||| |||||| ||||  | |||||||||||  |||||| ||  ||||||   ||||| |||||| | ||||| |    
T  48652109 acaaaaataaatgatattcattcattcaaattgataaagtacatcgatacaatacaactccaaattcgctaaaaaca-aaaagcatgaatctgtgaacaa 48652207  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | ||||| ||||||||||||||| |||   ||| |||  ||||||||||||||||||||||    
T  48652208 actcacatcatccatgttaatagcataaaacagcaaggtacctatgcctacaaatatgactatattcaa 48652276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 634 - 777
Target Start/End: Original strand, 54238697 - 54238840
Alignment:
Q  634 tattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatatt 733  Q
    ||||||||||| |||||| ||||  ||||||||||||| || |||| ||  | |||||| ||||| |||||| | ||||| |||||| |||  |||| ||    
T  54238697 tattcattcaaattgataaagtacattgatacaatacaaattcaaattcgct-aaaaataaaaaggatgaatctgtgaacaaactcacaacaaccatgtt 54238795  T
Q  734 aatagcataaaacggcagaata-catatatctacaaatatgacta 777  Q
    || ||||| |||||||| | || ||||| ||||||||||||||||    
T  54238796 aacagcatgaaacggcaaagtaccatatgtctacaaatatgacta 54238840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 694 - 781
Target Start/End: Original strand, 34960665 - 34960752
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| |||||||| | ||| |||||| | ||||||| |||||| |||||||||||| ||||| |||  |||||||||||||| ||||    
T  34960665 aaaaggatgaatatgtaaacaaactcacagcttccatgttaataacataaaacggcaaaatacttatgcctacaaatatgactgtatt 34960752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 625 - 760
Target Start/End: Complemental strand, 53403081 - 53402947
Alignment:
Q  625 aacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaac 724  Q
    ||||||||| || ||||||| |||||||||||  | ||||||||||| ||| ||| ||  | |||||  ||||  |||||||| ||||| |||| | |||    
T  53403081 aacaatattcatgcattcaaattgatagagtacatcgatacaatacaaatctaaattcgct-aaaaacaaaaatgatgaatatgtgaacaaactaacaac 53402983  T
Q  725 ttccatattaatagcataaaacggcagaatacatat 760  Q
     ||||| ||||||||||||||||||| | |||||||    
T  53402982 atccatgttaatagcataaaacggcaaagtacatat 53402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 616 - 774
Target Start/End: Complemental strand, 31270778 - 31270621
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| || || |||||||||||||||| | |||||||||  |  |||||||||| || |||| ||  ||||||   ||||| |||||| | ||||| |    
T  31270778 acaaaaatatacgatatttattcattcaaatggatagagtacatcaatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 31270680  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatga 774  Q
    ||||| ||| ||||| ||||| ||||| ||||||| | |||||||  ||||||||||||    
T  31270679 actcacaacatccatgttaattgcatacaacggcaaagtacatatgcctacaaatatga 31270621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 635 - 777
Target Start/End: Complemental strand, 38530374 - 38530233
Alignment:
Q  635 attcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatatta 734  Q
    |||||||||| |||||||||||  | ||||||||||| | ||||| |  |||||||   ||||| |||||| | ||||  |||||| | | ||||| |||    
T  38530374 attcattcaaattgatagagtacatcgatacaatacaaacccaaattttttaaaaaca-aaaaggatgaatctgtgaagaaactcaaagcatccatgtta 38530276  T
Q  735 atagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| |||||||||||| | |||||||  |||||||||||||||    
T  38530275 ataacataaaacggcaaagtacatatgcctacaaatatgacta 38530233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 1165133 - 1165226
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||| | ||||  | |||||| ||||||||||||| |||||    
T  1165133 aaaaggatgaatatgtgaacagactcacatcatccatgttaatagcataaaacggcaaagtacaattgtctacacatatgactatatttaaatc 1165226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 623 - 784
Target Start/End: Original strand, 3961449 - 3961609
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| ||| |||||| |||||| ||||| | ||||||||||| || |||||||| || |||   ||| || ||||| |   ||| |||||| |    
T  3961449 taaacgatattcatttattcaaattgataaagtatatcgatacaatacaaattcaaagtcactataaacaaaaatga-tgaatttgcaaacaaactcaca 3961547  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    || |||||||||||| |||||||||   || || ||||  ||||||||||||||||||||||    
T  3961548 acatccatattaataacataaaacgatggagtatatatgcctacaaatatgactatattcaa 3961609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 700 - 777
Target Start/End: Complemental strand, 22485351 - 22485274
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||| ||||||| |||||| ||| ||||| || |||||||||||||||| | ||| |||  |||||||||||||||    
T  22485351 atgaatctatgaacaaactcacaacatccatgttcatagcataaaacggcaaagtacctatgcctacaaatatgacta 22485274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 787
Target Start/End: Complemental strand, 33076662 - 33076569
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||||| |||||  ||||| ||  ||||| ||||||||||||||||||| | |||| ||  | ||| |||||||||||||||||||    
T  33076662 aaaaggatgaatatgtgaacagactcacaatatccatgttaatagcataaaacggcaaagtacaaatgccaacacatatgactatattcaaatc 33076569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 45047966 - 45047806
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||  ||||| |||||||||| |||||||||||| | ||||||||||| ||||||| ||  | |||||  ||||  ||||||   ||||| |    
T  45047966 acaaaaataaatgatattcattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgct-aaaaacgaaaatgatgaatcagtgaacaa 45047868  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||| ||||||||||| | |||||||  ||||| |||| ||||    
T  45047867 actcacatcatccatgttaataggataaaacggcaaagtacatatgcctacatatataacta 45047806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1049 - 1089
Target Start/End: Original strand, 8860657 - 8860697
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgcttct 1089  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  8860657 tggcagcaactttggttggaggtgcatttctctctgcttct 8860697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1049 - 1089
Target Start/End: Original strand, 10888677 - 10888717
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgcttct 1089  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  10888677 tggcagcaactttggttggaggtgcatttctctctgcttct 10888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1049 - 1089
Target Start/End: Complemental strand, 11131724 - 11131684
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgcttct 1089  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  11131724 tggcagcaactttggttggaggtgcatttctctctgcttct 11131684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1049 - 1089
Target Start/End: Complemental strand, 11153842 - 11153802
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgcttct 1089  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  11153842 tggcagcaactttggttggaggtgcatttctctctgcttct 11153802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1049 - 1089
Target Start/End: Complemental strand, 11162816 - 11162776
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgcttct 1089  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  11162816 tggctgcaactttggttggaggtgcatttctatctgcttct 11162776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 687 - 787
Target Start/End: Original strand, 20200788 - 20200888
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| ||||| ||||||||  ||||  ||||| ||| ||||| ||||||| ||||||||||| | |||| ||  ||||| ||||||||||||| ||||    
T  20200788 aaaaatgaaaaggatgaatatgcgaacagactcacaacatccatgttaatagtataaaacggcaaagtacaaatgcctacacatatgactatatttaaat 20200887  T
Q  787 c 787  Q
    |    
T  20200888 c 20200888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 687 - 787
Target Start/End: Original strand, 20202970 - 20203070
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| ||||| ||||||||  ||||  ||||| ||| ||||| ||||||| ||||||||||| | |||| ||  ||||| ||||||||||||| ||||    
T  20202970 aaaaatgaaaaggatgaatatgcgaacagactcacaacatccatgttaatagtataaaacggcaaagtacaaatgcctacacatatgactatatttaaat 20203069  T
Q  787 c 787  Q
    |    
T  20203070 c 20203070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 687 - 787
Target Start/End: Original strand, 43839247 - 43839347
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| |||||||||||| | |||||  ||||| ||| ||||| |||||| |||||||||||| | |||| ||  ||||| |||||| |||||| ||||    
T  43839247 aaaaataaaaagaatgaatctgtgaacagactcacaacatccatgttaatatcataaaacggcaaagtacaaatgcctacacatatgattatatttaaat 43839346  T
Q  787 c 787  Q
    |    
T  43839347 c 43839347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 618 - 690
Target Start/End: Complemental strand, 48212800 - 48212728
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaa 690  Q
    |||| |||||||||||||||||||| | |||||||||||  | ||| ||||||| || ||||||| |||||||    
T  48212800 aaaaataaacaatatttattcattccaattgatagagtacatcgatgcaatacaaattcaaagtcgttaaaaa 48212728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 634 - 777
Target Start/End: Complemental strand, 35175158 - 35175017
Alignment:
Q  634 tattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatatt 733  Q
    ||||||||||| |||||| ||||  | ||||||||||| ||||||| ||| ||||||   ||| |||||||| | ||||| |||||| | | ||||| ||    
T  35175158 tattcattcaaattgatatagtac-tcgatacaatacaaatccaaattcactaaaaaca-aaaggaatgaatttgtgaacaaactcacatcatccatgtt 35175061  T
Q  734 aatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||||||||||| || | ||| |||  ||||| |||||||||    
T  35175060 aatagcataaaacgacaaagtacttatgcctacacatatgacta 35175017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 694 - 781
Target Start/End: Complemental strand, 48401228 - 48401141
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| |||||| | ||||| |||||| | | ||||| ||||||||||| ||| ||| | |||||||  |||||||||||||||||||    
T  48401228 aaaaggatgaatctgtgaacaaactcacatcatccatgttaatagcatataacagcaaagtacatatgcctacaaatatgactatatt 48401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 616 - 679
Target Start/End: Original strand, 55090359 - 55090422
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaa 679  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| |||||||    
T  55090359 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaa 55090422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 709 - 787
Target Start/End: Original strand, 1806211 - 1806289
Alignment:
Q  709 tgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| ||| ||| | |||||||||||| |||||| ||||||||   ||| ||||||||||||||| |||||    
T  1806211 tgaacaaactcacaacatccttgttaatagcataatacggcaaaatacataagcctataaatatgactatattaaaatc 1806289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1051 - 1089
Target Start/End: Complemental strand, 11160713 - 11160675
Alignment:
Q  1051 gctgcaactttggtgggaggtgcatttctctctgcttct 1089  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  11160713 gctgcaactttggttggaggtgcatttctatctgcttct 11160675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 784
Target Start/End: Complemental strand, 21586276 - 21586186
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| |||||||||||||| |||||| ||| || || ||||||||||||||| ||| | |||| |   ||||| |||| |||||||||||    
T  21586276 aaaaggatgaatatatgaacaaactcacaacatcgatgttaatagcataaaacagcaaagtacaaaaggctacacatatcactatattcaa 21586186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 22286511 - 22286581
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  22286511 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 22286581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 618 - 780
Target Start/End: Original strand, 34103420 - 34103580
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||||||||||||||| |||| ||||| |||||||||||| | |||| |||||| ||  | | ||  | |||||| || || |||||| | ||||| ||     
T  34103420 aaaagtaaacaatattcattcgttcaaattgatagagtatatcgatataatacaaatttatattcgct-aaaaataaagaggatgaat-tgtgaacaaat 34103517  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatat 780  Q
    ||| ||| ||||| ||||||||| ||||||||| | ||  |||  ||||||||||||||||||    
T  34103518 tcacaacatccatgttaatagcacaaaacggcaaagtatttatgactacaaatatgactatat 34103580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 726 - 784
Target Start/End: Original strand, 41598245 - 41598303
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| |||||| ||||||| |||||| |||||||  |||||||||||| |||||||||    
T  41598245 tccattttaataacataaaatggcagagtacatatgcctacaaatatgattatattcaa 41598303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1049 - 1086
Target Start/End: Original strand, 13160351 - 13160388
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgct 1086  Q
    |||||||||||||||||||||| || ||||||||||||    
T  13160351 tggctgcaactttggtgggaggggcttttctctctgct 13160388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1049 - 1086
Target Start/End: Original strand, 13170402 - 13170439
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgct 1086  Q
    |||||||||||||||||||||| || ||||||||||||    
T  13170402 tggctgcaactttggtgggaggggcttttctctctgct 13170439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1049 - 1086
Target Start/End: Original strand, 13289036 - 13289073
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgct 1086  Q
    |||||||||||||||||||||| || ||||||||||||    
T  13289036 tggctgcaactttggtgggaggagcttttctctctgct 13289073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1049 - 1086
Target Start/End: Original strand, 13332275 - 13332312
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgct 1086  Q
    |||||||||||||||||||||| || ||||||||||||    
T  13332275 tggctgcaactttggtgggaggggcttttctctctgct 13332312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1049 - 1086
Target Start/End: Original strand, 13343460 - 13343497
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgct 1086  Q
    |||||||||||||||||||||| || ||||||||||||    
T  13343460 tggctgcaactttggtgggaggggcttttctctctgct 13343497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 720
Target Start/End: Complemental strand, 19148445 - 19148341
Alignment:
Q  616 acaaaagtaaacaatattt-attcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacg 714  Q
    |||||| ||||| |||||| |||||||||| ||||||| |||  | ||||||||||| || |||| ||  |||||| ||||||| |||||||| |||||     
T  19148445 acaaaaataaacgatatttcattcattcaaattgatagtgtacatcgatacaatacaaattcaaattcgctaaaaa-ttaaaaggatgaatatgtgaaca 19148347  T
Q  715 aactca 720  Q
    ||||||    
T  19148346 aactca 19148341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 634 - 671
Target Start/End: Complemental strand, 51742234 - 51742197
Alignment:
Q  634 tattcattcaagttgatagagtatgttgatacaataca 671  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  51742234 tattcattcaaattgatagagtatattgatacaataca 51742197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 2e-24; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 4882029 - 4882188
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  |||||||  |||||||||||| | ||||| |    
T  4882029 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaa--aaaagaatgaatttgtgaacaa 4882126  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||| ||| | |||||||  |||||||||||||||    
T  4882127 actcacagcatccatgttaatagcataaaacagcaaagtacatatgcctacaaatatgacta 4882188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 15390904 - 15391064
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||| | |    
T  15390904 acaaaaataaacgatatttattcattcaacttgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgatcaa 15391002  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||||||||||||||||||||||| | ||| |||  |||||||||||||||    
T  15391003 actcacagcatccatattaatagcataaaacggcaaagtacctatgcctacaaatatgacta 15391064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 662 - 784
Target Start/End: Original strand, 15312325 - 15312446
Alignment:
Q  662 atacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatata 761  Q
    |||||||||| |||||||||| ||||||| | ||||| |||||| |  |||| |||||| ||| ||||| |||||| |||||||||||| |||||||||     
T  15312325 atacaatacaaatccaaagtcgttaaaaa-taaaaaggatgaatctgcgaacaaactcacaacatccatgttaataacataaaacggcataatacatatg 15312423  T
Q  762 tctacaaatatgactatattcaa 784  Q
     |||||||||||||||| |||||    
T  15312424 gctacaaatatgactatgttcaa 15312446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 13691500 - 13691593
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| ||||||| |||||| ||| ||||| ||||||||||||||||||| ||||||||   ||||||||||||||||||| |||||    
T  13691500 aaaaggatgaatctatgaacaaactcacaacatccatgttaatagcataaaacggcaaaatacataagcctacaaatatgactatattaaaatc 13691593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 44517617 - 44517457
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||| | |||||  ||||| |||| | | ||||| |    
T  44517617 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcact-aaaaacaaaaaggatgactctgtgaacaa 44517519  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||||||||||||||   | |||||||  |||||||||||||||    
T  44517518 actcacaacatccatgttaatagcataaaacggtgaagtacatatgcctacaaatatgacta 44517457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 12872075 - 12871908
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  ||||||||||||| ||||| | ||  | |||||  ||||| ||| || ||||||| |    
T  12872075 acaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccatattcgct-aaaaacaaaaaggatggatttatgaacaa 12871977  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | ||||| ||| |||||||||||| || | |||||||  |||||| |||||||||||||||    
T  12871976 actcacagcatccatgttattagcataaaacgacaaagtacatatgcctacaagtatgactatattcaa 12871908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 781
Target Start/End: Original strand, 28677791 - 28677955
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||| |||||| |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||| |  |||| |    
T  28677791 acaaaaataaacgatattcatttattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgcgaacaa 28677889  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| ||| ||||| ||||||||||||||||| | | ||| |||  |||||||||||||||||||    
T  28677890 actcacaacatccatgttaatagcataaaacggaaaagtacctatgcctacaaatatgactatatt 28677955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 29205737 - 29205577
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||| | ||||||| ||  ||||||   ||||| |||||| | ||||  |    
T  29205737 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaataaaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaataa 29205639  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||| ||  |||||||||||||||    
T  29205638 actcacaacatccatgttaatagcataaaacggcaaagtacacatgcctacaaatatgacta 29205577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 687 - 787
Target Start/End: Complemental strand, 34567065 - 34566965
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| ||||| |||||| | ||||| |||||| ||| ||||| ||||||||||||||||||| | ||||||   ||||||||||||||||||| ||||    
T  34567065 aaaaataaaaaggatgaatctgtgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacataagcctacaaatatgactatattaaaat 34566966  T
Q  787 c 787  Q
    |    
T  34566965 c 34566965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 726 - 785
Target Start/End: Complemental strand, 10599224 - 10599165
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaa 785  Q
    ||||||||||||||||| |||| || | ||||||||||||||||||||||||||||||||    
T  10599224 tccatattaatagcatagaacgacaaagtacatatatctacaaatatgactatattcaaa 10599165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 700 - 787
Target Start/End: Complemental strand, 2350993 - 2350906
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||||||| ||||| |||||| ||| ||||| ||||||||||||||||||| | |||| |   ||||||||||||||||||| |||||    
T  2350993 atgaatatgtgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacaaaagcctacaaatatgactatattaaaatc 2350906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 688 - 786
Target Start/End: Original strand, 33125543 - 33125641
Alignment:
Q  688 aaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    ||||| ||||| || |||||  |||| |||||| ||| ||||| |||||||||||||||| || ||||  ||| |||| ||||||||||||||||||||    
T  33125543 aaaataaaaaggataaatatgcgaacaaactcacaacgtccatgttaatagcataaaacgacaaaataattatgtctataaatatgactatattcaaat 33125641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 624 - 783
Target Start/End: Original strand, 33486696 - 33486857
Alignment:
Q  624 aaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaa 723  Q
    |||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| || |||||||   ||||| |||||| | ||||| |||||| |     
T  33486696 aaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaaaag-atgaatctgtgaacaaactcacag 33486794  T
Q  724 cttccat----attaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    | |||||    |||||||||||||||||||| | ||| |||  |||||||||| ||||||||||    
T  33486795 catccatgttaattaatagcataaaacggcaaagtacctatgcctacaaatat-actatattca 33486857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 629 - 682
Target Start/End: Original strand, 25689518 - 25689571
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtc 682  Q
    |||||||||||||||| |||||||||||| ||||||||||||| || |||||||    
T  25689518 atatttattcattcaaattgatagagtatattgatacaatacaaattcaaagtc 25689571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 634 - 750
Target Start/End: Complemental strand, 27535148 - 27535033
Alignment:
Q  634 tattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatatt 733  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||| ||  ||||||   |||||||||||| | ||||| |||||| | | ||||| ||    
T  27535148 tattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaaca-aaaagaatgaatctgtgaacaaactcacatcatccatgtt 27535050  T
Q  734 aatagcataaaacggca 750  Q
    |||||||||||||||||    
T  27535049 aatagcataaaacggca 27535033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 687 - 787
Target Start/End: Complemental strand, 36621735 - 36621635
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| |||||||||||||| ||||| | |||| ||| ||||| |||||||||||||| |||| | |||| ||  ||||| |||||| |||||| ||||    
T  36621735 aaaaataaaaagaatgaatatgtgaacaagctcacaacatccatgttaatagcataaaatggcaaagtacaaatgcctacacatatgattatatttaaat 36621636  T
Q  787 c 787  Q
    |    
T  36621635 c 36621635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 687 - 787
Target Start/End: Original strand, 38644527 - 38644627
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    ||||| |||||| |||||||| ||||| | |||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| |||||||||| || ||||    
T  38644527 aaaaactaaaaggatgaatatgtgaacaagctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatttttaaat 38644626  T
Q  787 c 787  Q
    |    
T  38644627 c 38644627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 616 - 772
Target Start/End: Complemental strand, 42276824 - 42276669
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||||||||  |||| ||||| |||||||||||  | ||||||||||| || |||| |   | |||||| ||||| |||||| | ||||| |    
T  42276824 acaaaaataaacaatatgcattctttcaaattgatagagtacatcgatacaatacaaattcaaatttgct-aaaaataaaaaggatgaatctgtgaacaa 42276726  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatat 772  Q
    ||||| | | ||||| ||||||||||||||||||| | ||| |||  ||||||||||    
T  42276725 actcacagcatccatgttaatagcataaaacggcaaagtacctatgcctacaaatat 42276669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 618 - 777
Target Start/End: Complemental strand, 3233238 - 3233080
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||| ||  | ||||||||| | ||||||| ||  ||||||   ||| | || ||||| ||||| |||    
T  3233238 aaaaataaacgatattcattcattcaaattgatagattacatcgatacaatataaatccaaattcgctaaaaaca-aaacggattaatatgtgaacaaac 3233140  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| |||   ||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  3233139 tcacaacactcatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 3233080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 709 - 784
Target Start/End: Original strand, 28399088 - 28399163
Alignment:
Q  709 tgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| |||||| | | ||||| ||||||||||||||||||| | |||||||   |||||||||||||||||||||    
T  28399088 tgaacaaactcacatcatccatgttaatagcataaaacggcaaagtacatatgcttacaaatatgactatattcaa 28399163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 710 - 781
Target Start/End: Original strand, 40862579 - 40862650
Alignment:
Q  710 gaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||| |||||| ||| ||||| |||||||||||||||| |||| ||| |||  |||||||||||||||||||    
T  40862579 gaacaaactcaaaacatccatgttaatagcataaaacgacagagtacttatgcctacaaatatgactatatt 40862650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 661 - 784
Target Start/End: Complemental strand, 47551504 - 47551382
Alignment:
Q  661 gatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatat 760  Q
    ||||||||||| ||||||| ||  ||||||   ||||| |||||||| ||||| |||||| ||| || || |||||||||||||| |||| | ||  |||    
T  47551504 gatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatatgtgaacaaactcacaacatctatgttaatagcataaaatggcaaagtatctat 47551406  T
Q  761 atctacaaatatgactatattcaa 784  Q
      ||||||||||||||||||||||    
T  47551405 gcctacaaatatgactatattcaa 47551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 787
Target Start/End: Complemental strand, 21326850 - 21326757
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||||| ||||| | |||| ||| ||||| |||||||||||||||||||   |||| ||  ||||| ||||||||||||| |||||    
T  21326850 aaaaggatgaatatgtgaacaagctcacaacatccatgttaatagcataaaacggcaaggtacaaatgcctacacatatgactatatttaaatc 21326757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 700 - 777
Target Start/End: Original strand, 29726332 - 29726409
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||| | ||||| |||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  29726332 atgaatttgtgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 29726409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 32879162 - 32878995
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||| | |||||||||| |||||  ||||  | ||||||||||| ||||||||||  |||||| | ||||| || ||| |  ||||      
T  32879162 acaaaaataaacgataatcattcattcaaattgatttagtacatcgatacaatacaaatccaaagtcgctaaaaa-taaaaaggataaatctgcgaacat 32879064  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | |  |||| |||||||||||||||| || | ||| |||  ||||||||||||||||||||||    
T  32879063 actcacatcacccatgttaatagcataaaacgacaaagtacttatgcctacaaatatgactatattcaa 32878995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 694 - 777
Target Start/End: Complemental strand, 10627391 - 10627308
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| |||||| | ||||| |||||| ||| |||||||||||||  |||||||||| | |||||||  |||||||||| ||||    
T  10627391 aaaaggatgaatctgtgaacaaactcacaacatccatattaatagtctaaaacggcaaagtacatatgcctacaaatatcacta 10627308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 616 - 671
Target Start/End: Complemental strand, 18344066 - 18344011
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaataca 671  Q
    |||||| ||||| ||||||||| |||||| |||||||||||| | |||||||||||    
T  18344066 acaaaaataaacgatatttatttattcaaattgatagagtatatcgatacaataca 18344011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 700 - 775
Target Start/End: Complemental strand, 20413169 - 20413094
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgac 775  Q
    |||||| ||||||| |||||| | | ||||| |||||||||||||||| || | |||||||  |||||||||||||    
T  20413169 atgaatctatgaacaaactcacatcatccatgttaatagcataaaacgacaaagtacatatgcctacaaatatgac 20413094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 626 - 737
Target Start/End: Original strand, 33938706 - 33938816
Alignment:
Q  626 acaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaact 725  Q
    |||||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |||||| |||     
T  33938706 acaatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatttgtgaacaaactcacaaca 33938804  T
Q  726 tccatattaata 737  Q
    ||||| ||||||    
T  33938805 tccatgttaata 33938816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 694 - 777
Target Start/End: Complemental strand, 45750870 - 45750787
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| |||||| ||||||| |||||| | | ||||| |||||||||||||| |||| | ||| |||  |||||||||||||||    
T  45750870 aaaaggatgaatttatgaacaaactcacagcatccatgttaatagcataaaatggcaaagtacctatgcctacaaatatgacta 45750787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 732 - 787
Target Start/End: Complemental strand, 48003551 - 48003496
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||||||||||||||||| |||||||||   || || ||||||||||||||||||    
T  48003551 ttaatagcataaaacggcaaaatacatatgaatataattatgactatattcaaatc 48003496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 1768281 - 1768211
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| ||  |||||||||||||||| || |||||    
T  1768281 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacaaatatgactatgtttaaatc 1768211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 784
Target Start/End: Complemental strand, 8893669 - 8893579
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| |||||| || |||| |||||| ||| ||||| |||||||||||||||  |||| |||| |   ||||| ||||||||||||||||    
T  8893669 aaaaggatgaatctaggaacaaactcataacatccatgttaatagcataaaacaacagagtacaaaagcctacacatatgactatattcaa 8893579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 734 - 784
Target Start/End: Complemental strand, 8960841 - 8960791
Alignment:
Q  734 aatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||||||||| |||||| ||| ||| |||| ||||||||||||||||||    
T  8960841 aatagcataaaatggcagagtacgtatgtctataaatatgactatattcaa 8960791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 732 - 782
Target Start/End: Original strand, 10188659 - 10188709
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattc 782  Q
    ||||||||||||||| |  || |||||||| ||||||||||||||||||||    
T  10188659 ttaatagcataaaacagaggagtacatatacctacaaatatgactatattc 10188709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 750
Target Start/End: Original strand, 11877114 - 11877247
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||||||||| ||||||||| || || ||||||| ||| || ||||||  |||||||   |||||||||||  |  |||| |    
T  11877114 acaaaaataaacgatattaattcattcatgttgatagaatacgtcgatacaacacatattcaaagttgttaaaaaca-aaaagaatgaacttgcgaacaa 11877212  T
Q  716 actcagaacttccatattaatagcataaaacggca 750  Q
    ||||| | | ||||| |||||| ||||||||||||    
T  11877213 actcacagcatccatgttaataacataaaacggca 11877247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 779
Target Start/End: Complemental strand, 13152896 - 13152732
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagta--tgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaac 713  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |  |||||||| | |||||||  |  ||||| |  ||||| |||||| | |||||    
T  13152896 acaaaaataaacgatattcattcattcaaattgatagagtacatatcaatacaatataaatccaaatccgctaaaataa-aaaaggatgaatttgtgaac 13152798  T
Q  714 gaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactata 779  Q
     |||||| | | ||||| | ||||||||||||||||| | |||||||  ||||||||| |||||||    
T  13152797 aaactcacatcatccatgtcaatagcataaaacggcaaagtacatatgcctacaaatacgactata 13152732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 690
Target Start/End: Complemental strand, 16141080 - 16141006
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaa 690  Q
    |||||| ||||| ||||| |||||| ||| |||||||||||  | ||||||||||| ||||||| || |||||||    
T  16141080 acaaaaataaacgatattcattcatccaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaa 16141006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 38646938 - 38646868
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| ||||| |||||||||||||| |||| | |||| || |||||| ||||||||||||| |||||    
T  38646938 ctcacaacatccatgttaatagcataaaaaggcaaagtacaaatgtctacacatatgactatatttaaatc 38646868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 747
Target Start/End: Complemental strand, 42491338 - 42491211
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||||||||| |||||||||| |||||||||||  | ||||||||| | || |||| ||  |||||    ||||  |||||| | ||||| |    
T  42491338 acaaaaataaacaatattcattcattcaaattgatagagtacatcgatacaatataaattcaaattcgataaaa----aaaatgatgaatctgtgaacaa 42491243  T
Q  716 actcagaacttccatattaatagcataaaacg 747  Q
    ||||| ||| ||||| |||||| |||||||||    
T  42491242 actcacaacatccatgttaataacataaaacg 42491211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 44562509 - 44562579
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| ||||| |||||||||||||||||||  ||||| ||  ||||| ||||||||||||| |||||    
T  44562509 ctcacaacatccatgttaatagcataaaacggcaagatacaaatgcctacacatatgactatatttaaatc 44562579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 687 - 752
Target Start/End: Original strand, 2597303 - 2597368
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcaga 752  Q
    |||||| ||||  |||||||||||| | || ||| ||| ||||| |||||||||||||||||||||    
T  2597303 aaaaataaaaattatgaatatatgatcaaagtcacaacatccatgttaatagcataaaacggcaga 2597368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 15276183 - 15276276
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| | |||||  ||||| ||| ||||| |||||||||||||||||||   |||| ||  ||||| ||||||||||||| |||||    
T  15276183 aaaaggatgaatctgtgaacagactcacaacatccatgttaatagcataaaacggcaaggtacaaatgcctacacatatgactatatttaaatc 15276276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 621 - 682
Target Start/End: Complemental strand, 29938664 - 29938603
Alignment:
Q  621 agtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtc 682  Q
    ||||||||||||| ||||||| ||||| ||||||||  | ||||||||||| || |||||||    
T  29938664 agtaaacaatattcattcatttaagtttatagagtacatcgatacaatacaaattcaaagtc 29938603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 58; Significance: 8e-24; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 3719 - 3879
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  3719 acaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcggt-aaaaacaaaaaggatgaatctgtgaacaa 3817  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | || ||||  |||||||||||||||    
T  3818 actcacaacatccatgttaatagcataaaacggcaaagtatatatgcctacaaatatgacta 3879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 8e-24; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 21991131 - 21990971
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||||| ||||| |    
T  21991131 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatatgtgaacaa 21991033  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  21991032 actcacaacatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 21990971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 618 - 784
Target Start/End: Complemental strand, 45482519 - 45482357
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||||||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  |||||||    ||| |||||| | ||||| |||    
T  45482519 aaaagtaaacgatattaattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaa----aaggatgaatctgtgaacaaac 45482424  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||| ||| ||||| |||||||||||||||| || | ||  |||| ||||||||||||||||||||||    
T  45482423 tcacaacatccatgttaatagcataaaacgacaaagtatctatacctacaaatatgactatattcaa 45482357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 623 - 777
Target Start/End: Complemental strand, 32643430 - 32643277
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| ||||||||||||||||||||||    ||||||||| | ||||||| || |||||||   ||||| |||||| ||||||| |||||| |    
T  32643430 taaacgatattcattcattcaagttgatagagtacaccgatacaatataaatccaaattcgttaaaaaca-aaaaggatgaatctatgaacaaactcaca 32643332  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
     ||||||| |||||||||||||||||||  |||| |||  |||||||||||||||    
T  32643331 tcttccatgttaatagcataaaacggcaagatacttatgcctacaaatatgacta 32643277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 623 - 784
Target Start/End: Complemental strand, 38273351 - 38273191
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||||||||||||||||| || |||| ||||||  ||||||||||| | |||||||||| |||||||   ||||| |||||| |   ||| |||||| |    
T  38273351 taaacaatatttattcatttaaattgacagagtacattgatacaatataaatccaaagtccttaaaaaca-aaaaggatgaatttgctaacaaactcaca 38273253  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    || ||||| ||||||||||||||| ||| | |||||||  | ||||||||||||||||||||    
T  38273252 acatccatgttaatagcataaaacagcaaagtacatatgccaacaaatatgactatattcaa 38273191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 48304044 - 48304204
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| ||||||  ||| ||||||   ||||| |||||||| ||||| |    
T  48304044 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaatttcactaaaaaca-aaaaggatgaatatgtgaacaa 48304142  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  48304143 actcataacatccatgttaatagcataaaacggcaaagtacttatgcctacaaatatgacta 48304204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 616 - 781
Target Start/End: Complemental strand, 3266843 - 3266682
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||||||||| |||||||||| |||||| ||||  ||||||||||||| || |||| || || |||||  ||||| |||||| ||||||| |    
T  3266843 acaaaaataaacaatattcattcattcaaattgataaagtacattgatacaatacaaattcaaattcgtt-aaaaacaaaaaggatgaatctatgaacaa 3266745  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||   || ||||| |||||||||||||||| || | ||| |||  |||||||||||||||||||    
T  3266744 actc---acatccatgttaatagcataaaacgacaaagtacttatgcctacaaatatgactatatt 3266682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 616 - 783
Target Start/End: Original strand, 46025707 - 46025873
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  46025707 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatctttgaacaa 46025805  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| | | ||||| |||||||||||||||| || | |||||||  |||||||||||||||||||||    
T  46025806 actcacagcatccatgttaatagcataaaacgacaaagtacatatgcctacaaatatgactatattca 46025873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 629 - 783
Target Start/End: Original strand, 36719225 - 36719379
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| ||||||||||   | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |||||| ||| |||    
T  36719225 atattcattcattcaaattgatagagtgcatcgatacaatacaaatccaaattcgctaaaaacaaaaaaggatgaatttgtgaacaaactcacaacatcc 36719324  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    || ||||||||||||||||||  | ||| |||  |||||||||||||||||||||    
T  36719325 atgttaatagcataaaacggcgaagtacttatgcctacaaatatgactatattca 36719379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 617 - 783
Target Start/End: Original strand, 37375709 - 37375873
Alignment:
Q  617 caaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaa 716  Q
    ||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||| | |||||||| ||||| ||    
T  37375709 caaaaataaacgatattcattcattcaaattgatagagtacat-gatacaatacaaatccaaattcgctaaaaaca-aaagggatgaatatgtgaacaaa 37375806  T
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    |||| | | ||||| |||||||||||||||| || | |||||||  |||||||||||||||||||||    
T  37375807 ctcacagcatccatgttaatagcataaaacgacaaagtacatatgcctacaaatatgactatattca 37375873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 6667864 - 6667704
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| ||||||||| |  | ||||||||||| || |||| ||  ||||||   ||||| |||||| ||||||| |    
T  6667864 acaaaaataaacgatattcattcattcaaattgatagagcacatcgatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatctatgaacaa 6667766  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||||||||||| |||| | |||||||  |||||||||||||||    
T  6667765 actcacaacatccatgttaatagcataaaatggcaaagtacatatgcctacaaatatgacta 6667704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 781
Target Start/End: Complemental strand, 32741212 - 32741048
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||| |||||| |||||||||||| | ||||||||||| ||| ||| ||| | |||||  ||||| |||||| | ||||| |    
T  32741212 acaaaaataaacgatattcatttattcaaattgatagagtatatcgatacaatacaaatctaaattcact-aaaaacaaaaaggatgaatctgtgaacaa 32741114  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| ||| ||||| |||||||||||||||  || | || ||||  |||||||||||||||||||    
T  32741113 actcacaacatccatgttaatagcataaaacaacaaagtatatatgcctacaaatatgactatatt 32741048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 21603927 - 21603767
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| | ||| ||||| |||||||||| |||||||||||  |  |||||||||| || |||| ||||||||||   |||||  ||||| | ||||| |    
T  21603927 acaaaaattaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattcaaattcattaaaaaga-aaaagggtgaatctgtgaacaa 21603829  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||||| |||||||||| ||||| |||  |||||||||||||||    
T  21603828 actcacaacatccatgttaatagcgtaaaacggcaaaatacctatgcctacaaatatgacta 21603767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 769
Target Start/End: Original strand, 45457208 - 45457360
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||||||||| |||||||||| |||||||||||  | || ||| |||| || |||| ||  ||||||   ||||| |||||| | ||||| |    
T  45457208 acaaaaataaacaatattgattcattcaaattgatagagtacatcgacacagtacaaattcaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 45457306  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaa 769  Q
    ||||| ||| ||||||||||||||||||||||||| |||| ||||  |||||||    
T  45457307 actcacaacatccatattaatagcataaaacggcaaaatatatatgcctacaaa 45457360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 616 - 780
Target Start/End: Original strand, 4621032 - 4621195
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||||||| || ||||||| || || |||||  ||||| |||||| | | ||| |    
T  4621032 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaattcaaatccaaattcgtt-aaaaacaaaaaggatgaatctgttaacaa 4621130  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatat 780  Q
    ||||| ||| | ||| |||||||||||||| | || | |||||||  ||||||||||||||||||    
T  4621131 actcacaacattcatgttaatagcataaaatgacaaagtacatatgcctacaaatatgactatat 4621195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 629 - 777
Target Start/End: Complemental strand, 42645111 - 42644964
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||  | |||||||||||  || ||| ||  ||||||   ||||| |||||| | ||||| |||||| ||| |||    
T  42645111 atattcattcattcaaattgatagagtacatcgatacaatacaagtctaaattcgctaaaaaca-aaaaggatgaatctgtgaacaaactcacaacatcc 42645013  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || ||||||||||||||||||| | |||||||  |||||||||||||||    
T  42645012 atgttaatagcataaaacggcaaattacatatgcctacaaatatgacta 42644964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 9785786 - 9785626
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| ||||||| |||  | ||||||||||| ||||||| |   | ||||| |||| |||||||| | ||||| |    
T  9785786 acaaaaataaacgatattcattcattcaaattgatagggtacatcgatacaatacaaatccaaatttgct-aaaaactaaatgaatgaatttgtgaacaa 9785688  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| | ||  |||  |||||||||||||||    
T  9785687 actcacatcatccatgttaatagcataaaacggcaaagtatctatgcctacaaatatgacta 9785626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 624 - 777
Target Start/End: Complemental strand, 40762049 - 40761897
Alignment:
Q  624 aaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaa 723  Q
    |||| ||||| ||| |||||| |||||||||||| | |||||| |||| ||||||| ||  |||||||  ||||| |||||| | ||||| |||||| |     
T  40762049 aaacgatattcatttattcaaattgatagagtatatcgatacagtacaaatccaaattcgctaaaaaag-aaaaggatgaatctgtgaacaaactcatat 40761951  T
Q  724 cttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    | ||||| ||||||||||||||||||| | ||| |||   ||||||||||||||    
T  40761950 catccatgttaatagcataaaacggcaaagtacctatgcttacaaatatgacta 40761897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 629 - 777
Target Start/End: Complemental strand, 10574821 - 10574673
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||  |  |||||||| | ||| ||| ||  |||||||| ||||| |||||| | ||||| |||||| | | |||    
T  10574821 atattcattcattcaaattgatagagtacatcaatacaatataaatctaaattcgctaaaaaataaaaaggatgaatttgtgaacaaactcacagcatcc 10574722  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || ||||||||||||||||||| | ||||| |  ||| |||||||||||    
T  10574721 atgttaatagcataaaacggcaaagtacatgtgcctataaatatgacta 10574673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 616 - 776
Target Start/End: Original strand, 17508856 - 17509015
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||  ||||| |||| || || |||||||||||  | ||||||||||| ||| ||| ||  ||||||   ||||| |||||| | ||||| |    
T  17508856 acaaaagtaaatgatattcattcttttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 17508954  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgact 776  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||||||   |||||||||||||    
T  17508955 actcacaacatccatgttaatagcataaaacggcaaagtacatatgcttacaaatatgact 17509015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 616 - 776
Target Start/End: Complemental strand, 17544358 - 17544199
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||  ||||| |||| || || |||||||||||  | ||||||||||| ||| ||| ||  ||||||   ||||| |||||| | ||||| |    
T  17544358 acaaaagtaaatgatattcattcttttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 17544260  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgact 776  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||||||   |||||||||||||    
T  17544259 actcacaacatccatgttaatagcataaaacggcaaagtacatatgcttacaaatatgact 17544199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 618 - 774
Target Start/End: Original strand, 24319877 - 24320032
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| ||||||| || |||||||||||  | ||||||||||| ||| ||| ||  ||||||   |||||| ||||||| ||||| |||    
T  24319877 aaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaaaaga-tgaatatgtgaacaaac 24319975  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatga 774  Q
    ||| ||| ||||| || |||||||||||||||| | ||| |||  ||||||||||||    
T  24319976 tcacaacatccatgttgatagcataaaacggcaaagtacctatgcctacaaatatga 24320032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 715 - 785
Target Start/End: Original strand, 6646359 - 6646429
Alignment:
Q  715 aactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaa 785  Q
    |||||| ||| ||||| |||||||||||||| || ||| |||||||  |||||||||||||||||||||||    
T  6646359 aactcacaacatccatgttaatagcataaaatggtagagtacatatgcctacaaatatgactatattcaaa 6646429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 623 - 777
Target Start/End: Complemental strand, 10094902 - 10094749
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| |||||||||||| || |||||||| | || |||| |   ||||||   ||||| |||||| | ||||| |||||| |    
T  10094902 taaacgatattcattcattcaaattgatagagtatattaatacaatagaaattcaaatttgctaaaaaca-aaaaggatgaatctgtgaacaaactcaca 10094804  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || || || ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  10094803 acatcaatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 10094749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 616 - 782
Target Start/End: Original strand, 17473413 - 17473578
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||  ||||| |||| ||||| |||||||||||  | | ||||||||| ||| ||| ||  ||||||   ||||| |||||| | ||||| |    
T  17473413 acaaaagtaaatgatattcattctttcaaattgatagagtacatcggtacaatacaaatctaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 17473511  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattc 782  Q
    ||||| ||| ||||| ||||||| |||||| |||| | |||||||   |||||||||||||||||||    
T  17473512 actcacaacatccatgttaataggataaaatggcaaagtacatatgcttacaaatatgactatattc 17473578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 616 - 782
Target Start/End: Complemental strand, 17579801 - 17579636
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||  ||||| |||| ||||| |||||||||||  | | ||||||||| ||| ||| ||  ||||||   ||||| |||||| | ||||| |    
T  17579801 acaaaagtaaatgatattcattctttcaaattgatagagtacatcggtacaatacaaatctaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 17579703  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattc 782  Q
    ||||| ||| ||||| ||||||| |||||| |||| | |||||||   |||||||||||||||||||    
T  17579702 actcacaacatccatgttaataggataaaatggcaaagtacatatgcttacaaatatgactatattc 17579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 623 - 777
Target Start/End: Original strand, 22747168 - 22747321
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| |||||||||||  | ||||||||| | || |||| | | ||||||   ||||| |||| | | ||||| |||||| |    
T  22747168 taaacgatattgattcattcaaattgatagagtacatcgatacaatataaattcaaatttactaaaaaca-aaaaggatgattctgtgaacaaactcaca 22747266  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
     | ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  22747267 tcatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 22747321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 616 - 750
Target Start/End: Complemental strand, 41288425 - 41288292
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||  ||||||||| |||||||||||  | ||||||||||| || |||| ||| | |||||  ||||| |||||| | ||||| |    
T  41288425 acaaaaataaacgatattctttcattcaaattgatagagtacatcgatacaatacaaattcaaattcact-aaaaacaaaaaggatgaatctgtgaacaa 41288327  T
Q  716 actcagaacttccatattaatagcataaaacggca 750  Q
    ||||| | | ||||| |||||||||||||||||||    
T  41288326 actcacatcatccatgttaatagcataaaacggca 41288292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 37593552 - 37593392
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| ||||| |||||  | ||||||||||| ||| ||| ||  | |||||  ||||  |||||| | ||||| |    
T  37593552 acaaaaataaacgatattcattcattcaaattgatggagtacatcgatacaatacaaatctaaattcgct-aaaaacaaaaatgatgaatctgtgaacaa 37593454  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||  ||||| |||||||||||||||| || | ||| ||| ||||||||||||||||    
T  37593453 actcacaatatccatgttaatagcataaaacgacaaagtacctatgtctacaaatatgacta 37593392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 629 - 784
Target Start/End: Complemental strand, 5238390 - 5238239
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    |||||||||||||||| |||| ||||||  |  |||||||||| || |||| || ||||||| | ||||| |||||| |  |||| |||||| | | |||    
T  5238390 atatttattcattcaaattgacagagtacatccatacaatacaaattcaaaatcgttaaaaa-taaaaaggatgaatttgagaacaaactcacatcatcc 5238292  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    || |||||| ||||||||| |||  |||||||  ||||||||||||||||||||||    
T  5238291 atgttaataacataaaacgacag--tacatatg-ctacaaatatgactatattcaa 5238239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 618 - 750
Target Start/End: Complemental strand, 11833485 - 11833354
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| || |  | ||  ||||||   ||||| |||||| | ||||| |||    
T  11833485 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcgcattcgctaaaaaca-aaaaggatgaatctgtgaacaaac 11833387  T
Q  718 tcagaacttccatattaatagcataaaacggca 750  Q
    ||| ||| |||||||||||||||||||||||||    
T  11833386 tcacaacatccatattaatagcataaaacggca 11833354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 700 - 787
Target Start/End: Complemental strand, 47750105 - 47750018
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||||||| |||||  ||||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  47750105 atgaatatgtgaacagactcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 47750018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 8611384 - 8611454
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| ||| ||||| ||||||||||||| |||||    
T  8611384 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatacctacacatatgactatatttaaatc 8611454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 700 - 786
Target Start/End: Original strand, 29804422 - 29804508
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| | ||||| ||||||  || ||||| ||||||||||||||||||| | ||||||   ||||||||||||||||||| ||||    
T  29804422 atgaatctgtgaacaaactcacgacatccatgttaatagcataaaacggcaaagtacataagcctacaaatatgactatatttaaat 29804508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 703 - 781
Target Start/End: Original strand, 34594268 - 34594346
Alignment:
Q  703 aatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| ||||| |||||| ||| ||||| ||||||||||||||||||| | | |||||  ||||||| |||||||||||    
T  34594268 aatatgtgaacaaactcacaacatccatgttaatagcataaaacggcaaagtgcatatgcctacaaacatgactatatt 34594346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 5684715 - 5684658
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| ||||||||||||||||||| | |||||||  ||| |||||||||||||||||    
T  5684715 tccatgttaatagcataaaacggcaaagtacatatgcctataaatatgactatattca 5684658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 726 - 783
Target Start/End: Complemental strand, 5709765 - 5709708
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| ||||||||||||||||||| | |||||||  ||| |||||||||||||||||    
T  5709765 tccatgttaatagcataaaacggcaaagtacatatgcctataaatatgactatattca 5709708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 629 - 738
Target Start/End: Original strand, 15674028 - 15674136
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| ||||| |||||  | |||| |||||| || |||| ||| ||||||   |||||||||||||| ||||| |||||| ||| |||    
T  15674028 atattcattcattcaaattgattgagtacatcgataaaatacaaattcaaattcactaaaaacg-aaaagaatgaatatgtgaacaaactcacaacatcc 15674126  T
Q  729 atattaatag 738  Q
    ||||||||||    
T  15674127 atattaatag 15674136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 787
Target Start/End: Complemental strand, 40775644 - 40775551
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||||| |||||   |||| ||| ||||| ||||||||||||||||||| | ||||  | |||||| ||||||||||||| |||||    
T  40775644 aaaaggatgaatatgtgaacatgctcacaacatccatgttaatagcataaaacggcaaagtacaattgtctacacatatgactatatttaaatc 40775551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 787
Target Start/End: Complemental strand, 47156762 - 47156669
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||||||||||| | |||||  ||||| ||| ||||| |||||| ||||||||| || | |||| || |||||| ||||||||||||| |||||    
T  47156762 aaaagaatgaatttgtgaacagactcacaacatccatgttaataacataaaacgacaaagtacaaatgtctacacatatgactatatttaaatc 47156669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 618 - 777
Target Start/End: Original strand, 1280791 - 1280949
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| ||| |||||| |||||||||||  | |||| |||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |||    
T  1280791 aaaaataaacgatattcatttattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaaac 1280889  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| | | ||||| |||||||||||||| || | | |||||||  |||||| ||||||||    
T  1280890 tcatagcatccatgttaatagcataaaatggaaaagtacatatgcctacaactatgacta 1280949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 700 - 787
Target Start/End: Original strand, 21552198 - 21552285
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||||| ||||||| |||||| | | ||||| |||||| |||||||| ||| | ||||||   ||||||||||||||||||| |||||    
T  21552198 atgaatctatgaacaaactcacatcatccatgttaataacataaaacagcaaagtacataagcctacaaatatgactatattaaaatc 21552285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 616 - 679
Target Start/End: Complemental strand, 43847442 - 43847379
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaa 679  Q
    |||||| ||||  ||||| |||||||||| |||||||||||| | ||||||||||| |||||||    
T  43847442 acaaaaataaatgatattcattcattcaaattgatagagtatatcgatacaatacaaatccaaa 43847379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 784
Target Start/End: Complemental strand, 9137333 - 9137243
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| |||||| || |||| |||||| | | ||||| |||||||||||||| | || | ||| ||| |||||||||||||||| ||||||    
T  9137333 aaaaggatgaatttacgaacaaactcacatcatccatgttaatagcataaaatgacaaagtacttatgtctacaaatatgactaaattcaa 9137243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 635 - 781
Target Start/End: Original strand, 42603450 - 42603595
Alignment:
Q  635 attcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatatta 734  Q
    |||||||||| |||||||||||  | ||||||||| | || |||| ||  ||||||   ||| | |||||| | ||||| |||||| ||| || || |||    
T  42603450 attcattcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaaca-aaacggatgaatctgtgaacaaactcacaacatctatgtta 42603548  T
Q  735 atagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||||||||||||||| | | | |||  |||||||||||||||||||    
T  42603549 atagcataaaacggcaaagttcctatgcctacaaatatgactatatt 42603595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 735 - 781
Target Start/End: Original strand, 44482652 - 44482698
Alignment:
Q  735 atagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||||||||||||||| | |||||||  |||||||||||||||||||    
T  44482652 atagcataaaacggcaaagtacatatgcctacaaatatgactatatt 44482698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 625 - 682
Target Start/End: Complemental strand, 14762477 - 14762420
Alignment:
Q  625 aacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtc 682  Q
    |||||||||||||||||||| |||||||| ||  ||||||| ||||| || |||||||    
T  14762477 aacaatatttattcattcaaattgatagattacattgatactatacaaattcaaagtc 14762420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 715 - 784
Target Start/End: Original strand, 21954583 - 21954652
Alignment:
Q  715 aactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||||||| ||||| ||||||||||||||||| | ||||  |||  ||  ||||||||||||||||||    
T  21954583 aactcagaacatccatgttaatagcataaaacggaaaaatatctatgcctgtaaatatgactatattcaa 21954652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 26017395 - 26017488
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| | |||||  ||||| ||| ||||| |||||||||||||||||||   |||| ||  ||||| ||||||||||||| |||||    
T  26017395 aaaaggatgaatctgtgaacagactcacaacatccatgttaatagcataaaacggcaaggtacaaatgcctacacatatgactatatttaaatc 26017488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 657
Target Start/End: Original strand, 35544813 - 35544854
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtat 657  Q
    |||||| ||||| |||||||||||||||| ||||||||||||    
T  35544813 acaaaaataaactatatttattcattcaaattgatagagtat 35544854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 717 - 786
Target Start/End: Complemental strand, 42491057 - 42490988
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| || |||||| |||| |||||||| ||||    
T  42491057 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatgtctacacatattactatatttaaat 42490988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 787
Target Start/End: Complemental strand, 49167270 - 49167209
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  49167270 tccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 49167209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 3e-23; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 616 - 784
Target Start/End: Original strand, 4603968 - 4604135
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| |||||||||||| | ||||||||||| |||||||  |  || |||   ||||| |||||| | ||||| |    
T  4603968 acaaaagtaaacgatattcattcattcaaattgatagagtatatcgatacaatacaaatccaaatccgctagaaacaaaaaag-atgaatctctgaacaa 4604066  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| ||  ||||| ||||||||||||||||||| ||||  |||  ||||||||||||||||||||||    
T  4604067 actcacaatatccatgttaatagcataaaacggcaaaatatctatgcctacaaatatgactatattcaa 4604135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 17267778 - 17267938
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||| |||||| |||||||||||  ||||||||||||| ||||||| ||| | |||||  ||||| |||||| ||||||| |    
T  17267778 acaaaaataaacgatattcatttattcaaattgatagagtacattgatacaatacaaatccaaattcact-aaaaacaaaaaggatgaatctatgaacaa 17267876  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| | ||  ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  17267877 actcacaacatacacgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 17267938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 35333974 - 35333814
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| || |||||||   ||||| |||||| | ||||| |    
T  35333974 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaaaag-atgaatctgtgaacaa 35333876  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  35333875 actcacatcatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 35333814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 781
Target Start/End: Original strand, 9978330 - 9978494
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||| | ||||||||||| ||||||| ||  | |||||  |||||||||||||| ||||| |    
T  9978330 acaaaaataaactatattcattcattcaaattgatagagtatatcgatacaatacacatccaaattcgct-aaaaacgaaaagaatgaatatgtgaacaa 9978428  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| | | ||||| |||||| |||||||||| | | ||| ||   ||||||||||||| |||||    
T  9978429 actcacatcatccatgttaatatcataaaacggaaaagtacttacgcctacaaatatgacgatatt 9978494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 20560785 - 20560945
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  20560785 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 20560883  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||| ||||||||||| | |||| ||  |||||||||||||||    
T  20560884 actcacaacatccatgttaatagtataaaacggcaaagtacacatgcctacaaatatgacta 20560945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 27096158 - 27095998
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| ||||| |||||  | ||||||||||| || |||| ||| ||||||   ||||| |||||| | ||||| |    
T  27096158 acaaaaataaacgatattcattcattcaaattgatggagtacatagatacaatacaaattcaaattcactaaaaaca-aaaaggatgaatctgtgaacaa 27096060  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  27096059 actcacaacatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 27095998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 34416415 - 34416575
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||| | |||||||||||  | ||||||||||| ||||||| ||| ||||||   ||||||  |||| | ||||| |    
T  34416415 acaaaaataaacgatattcattcattcgaattgatagagtacatcgatacaatacaaatccaaattcactaaaaacaaaaaagac-gaatctgtgaacaa 34416513  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| | ||| ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  34416514 acttacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 34416575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 616 - 746
Target Start/End: Complemental strand, 4739798 - 4739669
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  4739798 acaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 4739700  T
Q  716 actcagaacttccatattaatagcataaaac 746  Q
    ||||| ||| ||||| |||||||||||||||    
T  4739699 actcacaacatccatgttaatagcataaaac 4739669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 13878661 - 13878821
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||| ||| ||  ||||||   ||||| |||||| | ||||| |    
T  13878661 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 13878759  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| |||||| |||||||||||| | ||| |||| |||||||||||||||    
T  13878760 actcacatcatccatgttaataccataaaacggcaaagtacttatacctacaaatatgacta 13878821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 14018786 - 14018946
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||| ||| ||  ||||||   ||||| |||||| | ||||| |    
T  14018786 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 14018884  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| |||||| |||||||||||| | ||| |||| |||||||||||||||    
T  14018885 actcacatcatccatgttaataccataaaacggcaaagtacttatacctacaaatatgacta 14018946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 33012517 - 33012357
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||  ||| ||  ||||||   ||||| |||||| | ||||| |    
T  33012517 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatttaaattcgctaaaaaca-aaaaggatgaatttgtgaacaa 33012419  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||||||  || ||||||||||||    
T  33012418 actcacaacatccatgttaatagcataaaacggcaaagtacatatgccttcaaatatgacta 33012357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 700 - 777
Target Start/End: Complemental strand, 34471346 - 34471269
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||||| ||||| |||||| ||| ||||| ||||||||||||||||||| |||||||||  |||||||||||||||    
T  34471346 atgaatatgtgaacaaactcacaacatccatgttaatagcataaaacggcaaaatacatatgcctacaaatatgacta 34471269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 18089064 - 18089226
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  18089064 acaaaaataaacgatattcattcattcaaattgatatagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 18089162  T
Q  716 actcagaacttcca--tattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||  ||||||||||||||||||||| ||||| |||  || ||||||||||||    
T  18089163 actcacaacatccacatattaatagcataaaacggcaaaatacctatgcctgcaaatatgacta 18089226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 25068310 - 25068143
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  25068310 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 25068212  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| | | ||  | |||||||||||||||||||   ||| |||  ||||||||||||||||||||||    
T  25068211 actcacatcatcagtgttaatagcataaaacggcaaggtacctatgcctacaaatatgactatattcaa 25068143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 623 - 784
Target Start/End: Original strand, 11798197 - 11798356
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| ||||||| || |||||||||||  | |||||||| || || |||||||  ||||||  |||||  |||||| |  |||| |||||| |    
T  11798197 taaacgatattcattcatttaaattgatagagtacatcgatacaattcaaattcaaagtcgctaaaaa--taaaaagatgaatctgcgaacaaactcaca 11798294  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    || ||||| |||||||||||||||| || | ||| |||  ||||||||||||||||||||||    
T  11798295 acatccatgttaatagcataaaacgacaaagtacctatgcctacaaatatgactatattcaa 11798356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 616 - 750
Target Start/End: Original strand, 12890769 - 12890902
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||| |||||| |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  12890769 acaaaaataaacgatattcattaattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 12890867  T
Q  716 actcagaacttccatattaatagcataaaacggca 750  Q
    ||||| ||| ||||| |||||||||||||||||||    
T  12890868 actcacaacatccatgttaatagcataaaacggca 12890902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 623 - 777
Target Start/End: Complemental strand, 44942748 - 44942595
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||| ||| ||  || |||   ||||| |||||| | ||||| |||||| |    
T  44942748 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatctaaattcgctataaaca-aaaaggatgaatctgtgaacaaactcaca 44942650  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  44942649 acatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 44942595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 710 - 786
Target Start/End: Original strand, 5071123 - 5071199
Alignment:
Q  710 gaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||| |||||| ||| ||||| ||||||||||||||||||| ||||||||   ||||||||||||||||||| ||||    
T  5071123 gaacaaactcacaacatccatgttaatagcataaaacggcataatacataagcctacaaatatgactatattaaaat 5071199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 618 - 777
Target Start/End: Original strand, 4426313 - 4426471
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| | ||| |||||||||| || ||||||||  | |||||| |||| ||||||| ||  |||||| | ||||| |||||| ||||||| |||    
T  4426313 aaaaataaacgacattcattcattcaaattcatagagtacatcgatacagtacaaatccaaattcgctaaaaact-aaaaggatgaatttatgaacaaac 4426411  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| | | ||||| |||||||||||||| || | | |||||||  |||||||||||||||    
T  4426412 tcatagcatccatgttaatagcataaaatggaaaagtacatatgcctacaaatatgacta 4426471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 709 - 783
Target Start/End: Original strand, 7072718 - 7072792
Alignment:
Q  709 tgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| |||||| ||| ||||| ||||||||||||||||||| | || ||||  |||||||||||||||||||||    
T  7072718 tgaacaaactcacaacatccatgttaatagcataaaacggcaaagtatatatgcctacaaatatgactatattca 7072792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 629 - 774
Target Start/End: Original strand, 38534970 - 38535114
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||  | ||||||||||| ||| ||| ||  ||||||   ||||| |||||| | ||||| |||||| ||| |||    
T  38534970 atattcattcattcaaattgatagagtacat-gatacaatacaaatctaaattcgctaaaaaca-aaaaggatgaatctgtgaacaaactcacaacatcc 38535067  T
Q  729 atattaatagcataaaacggcaga-atacatatatctacaaatatga 774  Q
    || ||||||||||||||||||| |  ||||||| |||||||||||||    
T  38535068 atgttaatagcataaaacggcaaatgtacatatgtctacaaatatga 38535114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 687 - 784
Target Start/End: Complemental strand, 11931256 - 11931159
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| |||||||||||| |  |||| |||||| ||| ||||| ||||||||||||||||||| | |||| |   ||||| ||||||||||||||||    
T  11931256 aaaaataaaaagaatgaatctgcgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacaaaagcctacacatatgactatattcaa 11931159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 15920322 - 15920161
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||  ||||| |||||||||| |||||||||||  | ||||||||||| ||      ||| ||||||   |||||| ||||| | ||||| |    
T  15920322 acaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaat------tcactaaaaacaaaaaaga-tgaatctgtgaacaa 15920230  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||  ||| || || ||||||||||||||||||| | |||||||  ||||||||||||||||||||||    
T  15920229 actcgcaacatcaatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactatattcaa 15920161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 36868477 - 36868317
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||| | |||| |||| | ||  ||| ||  ||||||   ||| || ||||| | || || |    
T  36868477 acaaaaataaacgatattcattcattcaaattgatagagtatatcgatataatataaatttaaattcgctaaaaacaaaaatga-tgaatctgtgtacaa 36868379  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  36868378 actcacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 36868317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 623 - 775
Target Start/End: Complemental strand, 5754744 - 5754593
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| |||||||| ||  | |||| |||||| || |||| ||  ||||||   ||||| |||||||| ||||| |||||| |    
T  5754744 taaacgatattcattcattcaaattgatagaatacatcgatataatacaaattcaaattcgctaaaaaca-aaaaggatgaatatgtgaacaaactcaca 5754646  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgac 775  Q
     | ||||| ||||||||||||||||||| | ||| |||  |||||||||||||    
T  5754645 tcatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgac 5754593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 732 - 784
Target Start/End: Complemental strand, 19904847 - 19904795
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||||||||||||||||||| ||||| | |||||||| ||||||||||||||    
T  19904847 ttaatagcataaaacggcagagtacatgtgtctacaaacatgactatattcaa 19904795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 702 - 778
Target Start/End: Original strand, 23256375 - 23256451
Alignment:
Q  702 gaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactat 778  Q
    |||||| | ||| |||||| ||| ||||| |||||| |||||||||| ||| |||||||| ||||||||||||||||    
T  23256375 gaatatgtaaacaaactcacaacatccatgttaatatcataaaacggtagagtacatatacctacaaatatgactat 23256451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 694 - 777
Target Start/End: Original strand, 11937595 - 11937678
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| |||||| | ||||| |||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  11937595 aaaaggatgaatctgtgaactaactcacaacatccatgttaatagcataaaacggcaaagtacttatgcctacaaatatgacta 11937678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 646 - 777
Target Start/End: Complemental strand, 22597575 - 22597444
Alignment:
Q  646 ttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaa 745  Q
    |||||||||||  |  |||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |||||| ||| ||||| ||||||||||||||    
T  22597575 ttgatagagtacatctatacaatacaaatccaaattcgctaaaaacaaaaaaggatgaatctgtgaacaaactcataacatccatgttaatagcataaaa 22597476  T
Q  746 cggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | |||  ||  |||||||||||||||    
T  22597475 cggcaaagtaccaatgcctacaaatatgacta 22597444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 617 - 679
Target Start/End: Original strand, 28261558 - 28261620
Alignment:
Q  617 caaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaa 679  Q
    ||||| ||||||||||| |||||||||| |||||||||||  | ||||||||||| |||||||    
T  28261558 caaaaataaacaatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaa 28261620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 783
Target Start/End: Complemental strand, 30933625 - 30933536
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| |||| ||| ||||| |||||| ||| ||||| ||||||||||||||||| | ||||  |||  ||| |||||||||||||||||    
T  30933625 aaaaggatgattatgtgaacaaactcacaacatccatgttaatagcataaaacggaaaaatatttatgcctataaatatgactatattca 30933536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 629 - 777
Target Start/End: Complemental strand, 32314881 - 32314734
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacaga-tccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttc 727  Q
    ||||| |||||||||| |||||| ||||  | ||||||||||| | |||||| || || ||||   ||||| |||||| | ||||| |||||| ||| ||    
T  32314881 atattcattcattcaaattgataaagtacatcgatacaatacaaaatccaaattcgtttaaaaca-aaaaggatgaat-tgtgaacaaactcaaaacatc 32314784  T
Q  728 catattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  32314783 catgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 32314734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 43473797 - 43473957
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| | |||| | ||  |||||| |||| | ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  43473797 acaaaagtaaacgatattcattcattcaaatcgatataatacattgatataatataaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 43473895  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| | |||  ||  |||||||||||||||    
T  43473896 actcacagcatccatgttaatagcataaaacggcaaagtactcatgcctacaaatatgacta 43473957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 687 - 787
Target Start/End: Complemental strand, 3465313 - 3465213
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| ||||| || ||| | ||||| | |||| ||| ||||| |||||||||||||||| || | |||| || |||||| ||||||||||||| ||||    
T  3465313 aaaaataaaaaggataaatctgtgaacaagctcacaacatccatgttaatagcataaaacgacaaagtacaaatgtctacacatatgactatatttaaat 3465214  T
Q  787 c 787  Q
    |    
T  3465213 c 3465213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 629 - 777
Target Start/End: Complemental strand, 12705142 - 12704996
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||  |||||| | ||||| |||||| ||| |||    
T  12705142 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaatgatgaatctgtgaacaaactcacaacatcc 12705044  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
     | ||||||||||||||| ||| | ||| |||  |||||||||||||||    
T  12705043 gtgttaatagcataaaac-gcaaagtacttatgcctacaaatatgacta 12704996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 700 - 784
Target Start/End: Original strand, 17056212 - 17056296
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| || |||| |||||| ||| | ||| ||||||||||||||||||| | |||| |  |||||| ||||||||||||||||    
T  17056212 atgaatctacgaacaaactcacaacattcatgttaatagcataaaacggcaaagtacaaaagtctacacatatgactatattcaa 17056296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 700 - 784
Target Start/End: Original strand, 17068659 - 17068743
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| || |||| |||||| ||| | ||| ||||||||||||||||||| | |||| |  |||||| ||||||||||||||||    
T  17068659 atgaatctacgaacaaactcacaacattcatgttaatagcataaaacggcaaagtacaaaagtctacacatatgactatattcaa 17068743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 700 - 784
Target Start/End: Original strand, 17095229 - 17095313
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| || |||| |||||| ||| | ||| ||||||||||||||||||| | |||| |  |||||| ||||||||||||||||    
T  17095229 atgaatctacgaacaaactcacaacattcatgttaatagcataaaacggcaaagtacaaaagtctacacatatgactatattcaa 17095313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 624 - 679
Target Start/End: Original strand, 7071435 - 7071490
Alignment:
Q  624 aaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaa 679  Q
    |||| ||||| |||||||||| |||||||||||  ||||||||||||| |||||||    
T  7071435 aaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaa 7071490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 616 - 747
Target Start/End: Original strand, 9689637 - 9689767
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||  ||||||| || |||||||||||  | |||| |||||| || |||| ||  |||||| | ||||| |||||||| ||||| |    
T  9689637 acaaaaataaacgatatacattcatttaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaa-taaaaaggatgaatatgtgaacaa 9689735  T
Q  716 actcagaacttccatattaatagcataaaacg 747  Q
    ||||| | | ||||| ||||||||||||||||    
T  9689736 actcatagcatccatgttaatagcataaaacg 9689767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 709 - 787
Target Start/End: Original strand, 2251099 - 2251177
Alignment:
Q  709 tgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||||  || ||||| ||||||||||||||| ||| | ||||||   ||||||||||||||||||| |||||    
T  2251099 tgaacaaactcacgacatccatgttaatagcataaaactgcaaagtacataagcctacaaatatgactatattaaaatc 2251177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 3603339 - 3603269
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  3603339 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 3603269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 5930777 - 5930707
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| |||||||||||||||||||||| || |||||| ||  ||||| ||||||| ||||| |||||    
T  5930777 ctcacaacatccatattaatagcataaaacgacaaaatacaaatgcctacacatatgaccatatttaaatc 5930707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 750
Target Start/End: Complemental strand, 16136547 - 16136414
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||| |||||| ||| ||| ||  | |||||  ||||| |||||| | ||||| |    
T  16136547 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaatctaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 16136449  T
Q  716 actcagaacttccatattaatagcataaaacggca 750  Q
    ||||| |   ||||| |||||||||||||||||||    
T  16136448 actcacattatccatgttaatagcataaaacggca 16136414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 25516846 - 25516776
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  25516846 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 25516776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 726 - 784
Target Start/End: Complemental strand, 31271721 - 31271663
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| |||||||||||||| |||| |||| ||||  |||||||||||||||| |||||    
T  31271721 tccatgttaatagcataaaatggcataatatatatgcctacaaatatgactatcttcaa 31271663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 623 - 777
Target Start/End: Original strand, 31908476 - 31908629
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| |||||||||||  |  |||||||| | ||||||| |   | |||||| ||||| |||||| | ||||| |||||| |    
T  31908476 taaacgatattcattcattcaaattgatagagtacatcaatacaatagaaatccaaatttgct-aaaaataaaaaggatgaatctgtgaacaaactcaca 31908574  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
     | | ||| ||||||||||||||||||| | ||  |||  |||||||||||||||    
T  31908575 gcattcatgttaatagcataaaacggcaaagtatctatgcctacaaatatgacta 31908629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 784
Target Start/End: Complemental strand, 34480342 - 34480252
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| ||||||||  |||| |||||| ||| ||||| ||||||| |||||||| || | |||| | | ||||| ||||||||||||||||    
T  34480342 aaaaggatgaatatgcgaacaaactcacaacatccatgttaatagaataaaacgacaaagtacaaaaacctacacatatgactatattcaa 34480252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 717 - 787
Target Start/End: Complemental strand, 43567227 - 43567157
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  43567227 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 43567157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 3397716 - 3397809
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| | ||||| |||||| |||  |||| |||||||||||||||| || | ||||||    |||||||||||||||||| |||||    
T  3397716 aaaaggatgaatttgtgaacaaactcacaacaaccatgttaatagcataaaacgacaaagtacataagcatacaaatatgactatattaaaatc 3397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 629 - 690
Target Start/End: Complemental strand, 5172235 - 5172174
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaa 690  Q
    ||||| ||| ||||||||||||| ||||| | ||||||||||| || |||||||| ||||||    
T  5172235 atattcatttattcaagttgataaagtatatcgatacaatacaaattcaaagtcactaaaaa 5172174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 7640093 - 7640186
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||||||||||| | |||||   |||| ||| ||||| |||||||||||||||||||   |||| ||  ||||| ||||||||||||| |||||    
T  7640093 aaaagaatgaatctgtgaacaggctcacaacatccatgttaatagcataaaacggcaaggtacaaatgcctacacatatgactatatttaaatc 7640186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 715 - 784
Target Start/End: Original strand, 11580895 - 11580964
Alignment:
Q  715 aactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| ||| ||||| ||||||| | |||||| || | ||||||| |||||||||||||| ||||||||    
T  11580895 aactcacaacatccatgttaatagtacaaaacgacaaagtacatatgtctacaaatatgaccatattcaa 11580964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 745
Target Start/End: Complemental strand, 11942837 - 11942709
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| | ||||||||| || |||| |||||| || |||| ||   ||||||  ||||| |||||| | ||||  |    
T  11942837 acaaaagtaaacgatattcattcattcaaatcgatagagtacgtcgatataatacaaattcaaattc-gcaaaaaacaaaaaggatgaatctgtgaataa 11942739  T
Q  716 actcagaacttccatattaatagcataaaa 745  Q
    ||||| |||  |||| ||||||||||||||    
T  11942738 actcacaacacccatgttaatagcataaaa 11942709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 787
Target Start/End: Original strand, 18141250 - 18141311
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  18141250 tccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 18141311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 787
Target Start/End: Complemental strand, 25771790 - 25771729
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||||||||||||||||| | ||||  | |||||| ||||||||||||| |||||    
T  25771790 tccatgttaatagcataaaacggcaaagtacaattgtctacacatatgactatatttaaatc 25771729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Complemental strand, 35354017 - 35353924
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||| || ||||| |||||| ||| ||||| |||||||||||||||  || | ||||||   ||| ||||||||||||||| |||||    
T  35354017 aaaaggatgaacatgtgaacaaactcacaacatccatgttaatagcataaaacaacaaagtacataagcctataaatatgactatattaaaatc 35353924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 787
Target Start/End: Complemental strand, 36508274 - 36508213
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  36508274 tccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 36508213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 781
Target Start/End: Original strand, 38384118 - 38384282
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| || |  | ||||||||||| || |||| ||  | |||||  ||||| |||||  | ||||| |    
T  38384118 acaaaaataaacgatattcattcattcaaattgataaagcacatcgatacaatacaaattcaaattcgct-aaaaacaaaaaggatgaacgtgtgaacaa 38384216  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||||| | ||||| |||||||| ||||||||||   ||| |||  ||| |||||||||||||||    
T  38384217 actcagagcatccatgttaatagcctaaaacggcaaggtacctatgcctataaatatgactatatt 38384282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 616 - 745
Target Start/End: Original strand, 40038975 - 40039103
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||  |||||||||  |||||| ||||  | ||||||||| | || |||||||||| |||||  ||||  |||||| || |||| |    
T  40038975 acaaaaataaacgatatccattcattcatattgataaagtacatcgatacaataaaaattcaaagtcatt-aaaaacaaaaatgatgaatctacgaacaa 40039073  T
Q  716 actcagaacttccatattaatagcataaaa 745  Q
    ||||| ||| ||||| ||||||||||||||    
T  40039074 actcacaacgtccatgttaatagcataaaa 40039103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 43929037 - 43929130
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| | |||||  ||||| ||| ||||| |||||||||||||||||||   |||| ||  ||||| ||||||||||||| |||||    
T  43929037 aaaaggatgaatttgtgaacagactcacaacatccatgttaatagcataaaacggcaaggtacaaatgcctacacatatgactatatttaaatc 43929130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 787
Target Start/End: Original strand, 44167480 - 44167541
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  44167480 tccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 44167541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 1e-22; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 24790830 - 24790988
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  |||||||   |||| |||||| | ||||| |    
T  24790830 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaa---aaaggatgaatctgtgaacaa 24790926  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||||||||||| |||| | |||||||  |||||||||||||||    
T  24790927 actcacaacatccatgttaatagcataaaatggcaaagtacatatgcctacaaatatgacta 24790988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 2024884 - 2025044
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||||||||| |||||||||| |||||||||||  | |||| |||||| ||||||| ||  | |||||  ||||  |||||| | ||||| |    
T  2024884 acaaaagtaaacaatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgct-aaaaacaaaaatgatgaatctgtgaacaa 2024982  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | ||  ||| ||||||||||||||||    
T  2024983 actcacaacatccatgttaatagcataaaacggcaaagtatctatgtctacaaatatgacta 2025044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 14600358 - 14600518
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| || ||||||||  | ||||||||||| ||  ||| ||  ||||||   ||||| |||||| ||||||| |    
T  14600358 acaaaaataaacgatatttattcattcaaattaatagagtacatcgatacaatacaaatttaaattcgctaaaaaca-aaaaggatgaatctatgaacaa 14600456  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||    
T  14600457 actcacaacatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgacta 14600518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 30026542 - 30026702
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||| || |||| ||  | |||||| ||||| |||||| | ||||| |    
T  30026542 acaaaaataaacgatatttattcattcaaattgatagagtatattgatacaatacaaattcaaattcgct-aaaaataaaaaggatgaatctgtgaacaa 30026640  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| |   ||||| |||||||||||||||  || | || ||||  |||||||||||||||    
T  30026641 actcacagtatccatgttaatagcataaaacaacaaagtatatatgcctacaaatatgacta 30026702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 623 - 784
Target Start/End: Original strand, 32778639 - 32778799
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||||||||| ||| |||||| |||||||||||  | |||||||| || ||||||||||  ||||||   ||| || ||||| |  |||| |||||| |    
T  32778639 taaacaatattcatttattcaaattgatagagtacatcgatacaattcaaatccaaagtcgctaaaaacaaaaatga-tgaatttgcgaacaaactcaca 32778737  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||  |||||||||||||||||||||||| | ||| |||  ||||||||||||||||||||||    
T  32778738 acaaccatattaatagcataaaacggcaaagtacctatggctacaaatatgactatattcaa 32778799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 37613105 - 37612945
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||| | ||||||||||| || |||| || || |||||  ||||| |||||| | ||||| |    
T  37613105 acaaaaataaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattcaaattcgtt-aaaaacaaaaaggatgaatctgtgaacaa 37613007  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| |||||||||||||| |||| | ||| |||  |||||||||||||||    
T  37613006 actcacatcatccatgttaatagcataaaatggcaaagtacctatgcctacaaatatgacta 37612945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 616 - 783
Target Start/End: Original strand, 13570427 - 13570591
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||||||| || |||||||||||| | ||||||||||| ||  ||| |  |||||||   ||||| |||||||| ||||| |    
T  13570427 acaaaaataaacgatattcattcatttaaattgatagagtatatcgatacaatacaaatttaaatttgttaaaaacaaaaaag-atgaatatgtgaacaa 13570525  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| ||| ||||| ||||||||||||||||||||  ||| |||  ||||||| |||||||||||||    
T  13570526 actcacaacatccatgttaatagcataaaacggcag--tacctatgcctacaaacatgactatattca 13570591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 618 - 777
Target Start/End: Complemental strand, 4757615 - 4757457
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||||||  ||||||||||||| ||| ||| ||  | |||||  ||||| |||||||| ||||| |||    
T  4757615 aaaactaaacgatattcattcattcaaattgatagagtacattgatacaatacaaatctaaattcgct-aaaaacaaaaaggatgaatatgtgaacaaac 4757517  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| ||| ||||| |||||| |||||||||||| | ||  |||  |||||||||||||||    
T  4757516 tcacaacatccatgttaataacataaaacggcaaagtatctatgcctacaaatatgacta 4757457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 616 - 750
Target Start/End: Original strand, 43936840 - 43936973
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||| | |||||||||||  | ||||||||||| || |||| ||| | |||||  ||||| |||||| | ||||| |    
T  43936840 acaaaaataaacgatatttattcattcgaattgatagagtagatcgatacaatacaaattcaaattcact-aaaaacaaaaaggatgaatctgtgaacaa 43936938  T
Q  716 actcagaacttccatattaatagcataaaacggca 750  Q
    ||||| ||| ||||| |||||||||||||||||||    
T  43936939 actcacaacatccatgttaatagcataaaacggca 43936973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 39067350 - 39067510
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||| || || |||||||||||| | ||||| ||||| ||  ||| ||  ||||||   |||||||||||| | ||||| |    
T  39067350 acaaaaataaacgatattcattcttttaaattgatagagtatatcgatactatacaaatttaaattcgctaaaaaca-aaaagaatgaatctgtgaacaa 39067448  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||||| | ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  39067449 actcagagcatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 39067510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 694 - 781
Target Start/End: Original strand, 10338568 - 10338655
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| |||||||| ||||| |||||| ||| ||||| ||||||||||||||||||| | ||| |||  |||||||||||||||||||    
T  10338568 aaaaggatgaatatgtgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacctatgcctacaaatatgactatatt 10338655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 616 - 781
Target Start/End: Complemental strand, 31202917 - 31202754
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||| |||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  31202917 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaa--caaaaggatgaatctgtgaacaa 31202820  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| ||| ||||| ||||||| |||||| |||| | ||| |||  ||||||||| |||||||||    
T  31202819 actcacaacatccatgttaatagtataaaatggcaaagtacctatgcctacaaataggactatatt 31202754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 5526271 - 5526111
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||||||||  | ||||||||| |  | |||| ||  |||||| | ||||| |||||||| ||||| |    
T  5526271 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatataagttcaaattcgctaaaaa-taaaaaggatgaatatgtgaacaa 5526173  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||  | | || || |||||||||||||||| ||   ||||||| ||||||||||||||||    
T  5526172 actcgcagcatctatgttaatagcataaaacgacaaggtacatatgtctacaaatatgacta 5526111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 781
Target Start/End: Complemental strand, 10148405 - 10148241
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||||||||| |||||||||| |||||||| ||  | ||||||||||| |||| || ||  ||||||   ||| || ||||| | ||||| |    
T  10148405 acaaaaataaacaatattcattcattcaaattgatagattacatcgatacaatacaaatcctaattcgctaaaaacaaaaatga-tgaatctgtgaacaa 10148307  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||||| | | ||||| |||||||||||||||| || | ||| |||  |||||||||||||||||||    
T  10148306 actcacatcatccatgttaatagcataaaacgacaaagtacttatgcctacaaatatgactatatt 10148241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 694 - 786
Target Start/End: Original strand, 18190588 - 18190680
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||||||||| | ||||| |||||| ||| |||||||||||||||||||||| || | |||| |   ||||||||||||||||||| ||||    
T  18190588 aaaagaatgaatctgtgaacaaactcacaacatccatattaatagcataaaacgacaaagtacacaagcctacaaatatgactatattaaaat 18190680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 687 - 787
Target Start/End: Original strand, 27534142 - 27534242
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| ||||| |||||| | ||||| |||||| ||| | ||| ||||||||||||||||||| | ||||||   ||||||||||||||||||| ||||    
T  27534142 aaaaataaaaaggatgaatctgtgaacaaactcacaacattcatgttaatagcataaaacggcaaagtacataagcctacaaatatgactatattaaaat 27534241  T
Q  787 c 787  Q
    |    
T  27534242 c 27534242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 616 - 747
Target Start/End: Complemental strand, 11162355 - 11162225
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    ||||||||| || ||||| |||||||||| ||||| |||||  | ||||||||||| ||||||| ||  | |||||  ||||| ||||||||  |||| |    
T  11162355 acaaaagtatacgatattcattcattcaaattgatggagtacatcgatacaatacaaatccaaattcgct-aaaaacgaaaaggatgaatatgggaacaa 11162257  T
Q  716 actcagaacttccatattaatagcataaaacg 747  Q
    ||||| ||| ||||| ||||||||||||||||    
T  11162256 actcacaacatccatgttaatagcataaaacg 11162225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 618 - 777
Target Start/End: Complemental strand, 41362200 - 41362041
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||||||  |  |||||||||| || ||    |  |||||||  || || |||||| ||||||| |||    
T  41362200 aaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaattcatttacgctaaaaaaaaaagaggatgaatctatgaacaaac 41362101  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| ||| ||||| ||||||||||||||||||||  ||| |||  |||||||||||||||    
T  41362100 tcacaacatccatgttaatagcataaaacggcagggtacctatgcctacaaatatgacta 41362041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 688 - 778
Target Start/End: Original strand, 11298493 - 11298583
Alignment:
Q  688 aaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactat 778  Q
    ||||| ||||| |||||||||||||| |||||| ||| ||||| |||||||||||||||  || | ||||||   ||||||||||||||||    
T  11298493 aaaataaaaaggatgaatatatgaacaaactcacaacatccatgttaatagcataaaacaacaaagtacataatactacaaatatgactat 11298583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 618 - 771
Target Start/End: Complemental strand, 2968982 - 2968830
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| || ||||||| || |||||  | |||||||||| | ||||| |||    
T  2968982 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacatattcaaagtcgtt-aaaaacgataagaatgaatctgtgaacaaac 2968884  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaata 771  Q
     || | | ||||| |||||| |||||||||||| | ||| |||  |||||||||    
T  2968883 acatatcatccatcttaataacataaaacggcaaagtacttatgcctacaaata 2968830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 732 - 784
Target Start/End: Original strand, 6219886 - 6219938
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||||||||||  | |||| |||||||||||||||||||||||||||||||    
T  6219886 ttaatagcataaagtgacagagtacatatatctacaaatatgactatattcaa 6219938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 9502037 - 9501878
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| |||||||||||  | ||||||||||| || |||  ||  ||||||   ||||   ||||| | | ||| |    
T  9502037 acaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcaagttcgctaaaaa--caaaaagctgaatctgtaaacaa 9501940  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||| |||||||||||| | ||| |||  |||||||||||||||    
T  9501939 actcacaacatccatgttaataacataaaacggcaaagtacttattcctacaaatatgacta 9501878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 700 - 781
Target Start/End: Complemental strand, 12357166 - 12357085
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||||| | ||||| |||||| ||| ||||| ||||||| |||||  |||||| |||||| | |||||||||||||||||||    
T  12357166 atgaatttgtgaacaaactcacaacatccatgttaatagaataaattggcagagtacataaacctacaaatatgactatatt 12357085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 629 - 746
Target Start/End: Original strand, 13575882 - 13575998
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| ||||||| || |||||||||||  | ||||||||||| ||||||||||  | |||||  ||||| |||||| |  |||| |||||| ||| |||    
T  13575882 atattcattcatttaaattgatagagtacatcgatacaatacatatccaaagtcgct-aaaaacaaaaaggatgaatttgcgaacaaactcacaacatcc 13575980  T
Q  729 atattaatagcataaaac 746  Q
    || |||||||||||||||    
T  13575981 atgttaatagcataaaac 13575998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 700 - 781
Target Start/End: Complemental strand, 19489199 - 19489118
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||||| || |||| |||| | ||| |||||||||||||||||||||| |  |||||||||| | | |||||||||||||||    
T  19489199 atgaatctacgaacaaactaacaacatccatattaatagcataaaacgtcccaatacatatacccataaatatgactatatt 19489118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 629 - 750
Target Start/End: Original strand, 28296788 - 28296908
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  |||||  ||||| | ||||| |||||| | | |||    
T  28296788 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggttgaatctgtgaacaaactcacagcatcc 28296886  T
Q  729 atattaatagcataaaacggca 750  Q
    || |||||||||||||||||||    
T  28296887 atgttaatagcataaaacggca 28296908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 616 - 747
Target Start/End: Original strand, 2234130 - 2234260
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||| |||||| || |||| ||  | |||||  ||||| |||| ||| ||||  |    
T  2234130 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaattcaaattcgct-aaaaacaaaaaggatgattatgtgaataa 2234228  T
Q  716 actcagaacttccatattaatagcataaaacg 747  Q
    ||||| | | ||||||||||||||||||||||    
T  2234229 actcacatcatccatattaatagcataaaacg 2234260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 8054545 - 8054638
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||||| |||||   |||| ||| ||||| |||||||||||||||||||   |||| ||  ||||| ||||||||||||| |||||    
T  8054545 aaaaggatgaatatgtgaacccgctcacaacatccattttaatagcataaaacggcaaggtacaaatgcctacacatatgactatatttaaatc 8054638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 717 - 786
Target Start/End: Original strand, 16996649 - 16996718
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||| ||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| ||||    
T  16996649 ctcacaacatccatgttaatagcataaaacggcaaagtacaaatgcctacatatatgactatatttaaat 16996718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 732 - 777
Target Start/End: Original strand, 37128263 - 37128308
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||||||||||||||||| | |||||||  |||||||||||||||    
T  37128263 ttaatagcataaaacggcaaagtacatatgcctacaaatatgacta 37128308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 700 - 777
Target Start/End: Original strand, 40490276 - 40490353
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    |||||| | ||||| |||||| ||| ||||| ||||||| ||||||||||| ||||| |||  ||| |||||||||||    
T  40490276 atgaatctgtgaacaaactcacaacatccatgttaatagtataaaacggcaaaatacctatgcctataaatatgacta 40490353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 5e-22; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 6882413 - 6882249
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  6882413 acaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctctgaacaa 6882315  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| ||| ||||   |||||||||||||||||| | ||  ||| |||||||||||||||||||||||    
T  6882314 actcacaacatcca---taatagcataaaacggcaaagtatttatgtctacaaatatgactatattcaa 6882249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 618 - 783
Target Start/End: Complemental strand, 7060781 - 7060617
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| |||||||||| |||||||||||  ||||||||||||| ||||||| ||  | |||||  ||||| ||||| || ||||| |||    
T  7060781 aaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaaaatgtgaacaaac 7060683  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||| ||| ||||| ||||||||||||||||  | | ||| |||  |||||||||||||||||||||    
T  7060682 tcacaacatccatgttaatagcataaaacgataaagtacctatgcctacaaatatgactatattca 7060617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 8712977 - 8712816
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||||||||  | ||||||||||| ||| ||| ||| ||||||   ||||| |||||| | ||||| |    
T  8712977 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatctaaattcactaaaaacaaaaaaggatgaatttgtgaacaa 8712878  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| |||||||||||||||| || | ||| |||  |||||||||||||||    
T  8712877 actcacatcatccatgttaatagcataaaacgacaaagtacttatgcctacaaatatgacta 8712816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 393926 - 394086
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| ||||||| || |||||||   |||||  ||||| | ||||| |    
T  393926 acaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatccaaattcgttaaaaaca-aaaagggtgaatctgtgaacaa 394024  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||||||| | | |||||||  |||||||||||||||    
T  394025 actcacaacatccatgttaatagcataaaacgggaaagtacatatgcctacaaatatgacta 394086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 616 - 747
Target Start/End: Complemental strand, 27091177 - 27091047
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| |||||||||||||||| |||||||||||  | ||||||||||| |||||||||||||| ||||  ||||| || |||||  |||| |    
T  27091177 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaatccaaagtcatta-aaaacaaaaaggataaatatgcgaacaa 27091079  T
Q  716 actcagaacttccatattaatagcataaaacg 747  Q
    ||| | ||| || || ||||||||||||||||    
T  27091078 acttacaacatctatgttaatagcataaaacg 27091047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 616 - 783
Target Start/End: Original strand, 36124009 - 36124175
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||| ||||| ||||||||||   | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  36124009 acaaaaataaacgatattcattctttcaaattgatagagtccatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 36124107  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| ||| ||||| ||||||||||||| ||||| |  ||||||  |||||||||||||||||||||    
T  36124108 actcacaacatccatgttaatagcataaatcggcaaagcacatatgcctacaaatatgactatattca 36124175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 646 - 783
Target Start/End: Complemental strand, 22757523 - 22757388
Alignment:
Q  646 ttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaa 745  Q
    |||||||||||  | ||||||||||| ||||||| ||  |||||||  ||||| |||||| | ||||| |||||| ||| ||||| ||||||||||||||    
T  22757523 ttgatagagtacatcgatacaatacaaatccaaattcgctaaaaaa--aaaaggatgaatctgtgaacaaactcacaacatccatgttaatagcataaaa 22757426  T
Q  746 cggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||  | ||| |||  |||||||||||||||||||||    
T  22757425 cggctaagtacctatgcctacaaatatgactatattca 22757388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 637 - 783
Target Start/End: Complemental strand, 51152563 - 51152418
Alignment:
Q  637 tcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaat 736  Q
    |||||||| |||||| ||||  | ||||||||||| ||||||| ||  |||||| ||||| ||| || | | ||||| |||||| ||| ||||| |||||    
T  51152563 tcattcaaattgataaagtacatcgatacaatacaaatccaaattcgctaaaaacttaaaggaa-gactttgtgaacaaactcacaacatccatgttaat 51152465  T
Q  737 agcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    |||||||||||||| | ||||| |  |||||||||||||||||||||    
T  51152464 agcataaaacggcaaagtacatttgcctacaaatatgactatattca 51152418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 20887409 - 20887569
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||||||| || |||||||||||  | ||||||||| | ||||||| ||  ||||||   |||||| ||||| | ||||| |    
T  20887409 acaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaacaaaaaaga-tgaatctgtgaacaa 20887507  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||| |||||||||||| | |||||||  |||||||||||||||    
T  20887508 actcacaacatccatgttaatatcataaaacggcaaagtacatatgcctacaaatatgacta 20887569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 45350722 - 45350882
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  |||||  ||||| | ||||| |    
T  45350722 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaagggtgaatctgtgaacaa 45350820  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||| |||||||||||| | ||| |||  |||||||||||||||    
T  45350821 actcacaacatccatgttaataacataaaacggcaaagtacctatgcctacaaatatgacta 45350882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 45360201 - 45360361
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  |||||  ||||| | ||||| |    
T  45360201 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaagggtgaatctgtgaacaa 45360299  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| |||||| |||||||||||| | ||| |||  |||||||||||||||    
T  45360300 actcacaacatccatgttaataacataaaacggcaaagtacctatgcctacaaatatgacta 45360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 700 - 784
Target Start/End: Original strand, 6082174 - 6082258
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| | ||||| |||||| ||| ||||| ||||||||||||||||||| | |||||||  ||||||||||||||||||||||    
T  6082174 atgaatctgtgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacatatgcctacaaatatgactatattcaa 6082258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 629 - 780
Target Start/End: Complemental strand, 53648063 - 53647912
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaat-acagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttc 727  Q
    ||||| |||||||||| |||||||||||  | |||||||| ||| ||||||| ||  ||||||   ||||| |||||||| ||||| |||||| ||| ||    
T  53648063 atattcattcattcaaattgatagagtacatcgatacaattacaaatccaaattcgctaaaaaca-aaaaggatgaatatgtgaacaaactcataacatc 53647965  T
Q  728 catattaatagcataaaacggcagaatacatatatctacaaatatgactatat 780  Q
    ||| |||||||||| |||||||| | ||| |||  ||||||||||||||||||    
T  53647964 catgttaatagcattaaacggcaaagtacctatgcctacaaatatgactatat 53647912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 624 - 747
Target Start/End: Original strand, 3171284 - 3171405
Alignment:
Q  624 aaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaa 723  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||| || |||||| | | |||||| ||||  ||||| ||| |||| |||||| ||    
T  3171284 aaacaatatttattcattcaaattgatatagtacgttgatacaatacaaattcaaagt-acttaaaaataaaaatgatgaa-ataagaacaaactcacaa 3171381  T
Q  724 cttccatattaatagcataaaacg 747  Q
    | | ||| ||||||||||||||||    
T  3171382 catacatgttaatagcataaaacg 3171405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 618 - 781
Target Start/End: Original strand, 7083475 - 7083637
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||| ||||| ||||| ||||| |||| |||||||||||  | ||||||||| | || |||| ||  |||||| | ||||| |||||| | ||||| |||    
T  7083475 aaaaataaacgatattcattcactcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaa-taaaaaggatgaatctgtgaacaaac 7083573  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    ||| ||| ||||| ||||||||||||||||||| | ||| |||  ||| |||||||||||||||    
T  7083574 tcacaacatccatgttaatagcataaaacggcaaagtacctatgcctataaatatgactatatt 7083637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 694 - 780
Target Start/End: Complemental strand, 47466294 - 47466208
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatat 780  Q
    ||||| |||||| | ||||| |||||| ||| ||||| ||||||||||||||||||| | |||||| | ||||||||||||||||||    
T  47466294 aaaaggatgaatctgtgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacataaacctacaaatatgactatat 47466208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 11209965 - 11210125
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||  ||||| |||||||||| |||||||||||  |  ||||||| || ||||||| ||| ||||||  |||| || ||||| | ||||| |    
T  11209965 acaaaaataaaagatattcattcattcaaattgatagagtacatcaatacaatgcaaatccaaattcactaaaaacataaagga-tgaatctgtgaacaa 11210063  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| |||||  ||||||||||||||| || | |||||||  |||||||||||||||    
T  11210064 actcacaacatccatgataatagcataaaacgacaaagtacatatgcctacaaatatgacta 11210125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 13966012 - 13965852
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | | ||| |    
T  13966012 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaattccct-aaaaacaaaaaggatgaatctgttaacaa 13965914  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| | | ||||| ||||||||||||||||||| | | | |||  |||||||||||||||    
T  13965913 actcacagcatccatgttaatagcataaaacggcaaagtccctatgcctacaaatatgacta 13965852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 624 - 784
Target Start/End: Complemental strand, 31932708 - 31932549
Alignment:
Q  624 aaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaa 723  Q
    |||| ||||| |||||||||| |||||| ||||  | || |||||||| || |||| || |||||||   ||||| ||||||||  |||| |||||| ||    
T  31932708 aaacgatattcattcattcaaattgataaagtacatcgacacaatacaaattcaaaatcgttaaaaaca-aaaagtatgaatatgcgaacaaactcataa 31932610  T
Q  724 cttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    | ||||| |||||||||||||||   ||| |||||||  |||||||||||| |||||||||    
T  31932609 catccatgttaatagcataaaacaatagagtacatatgcctacaaatatgattatattcaa 31932549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 616 - 783
Target Start/End: Original strand, 477673 - 477839
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| | |||||||||  |||||||| |||| || |||| ||  ||||||   ||| || ||||| | ||||| |    
T  477673 acaaaaataaacgatattcattcattcaaatcgatagagtacattgatacagtacaaattcaaattcgctaaaaacaaaaacga-tgaatctgtgaacaa 477771  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    ||||| ||| ||||| |||||||||||||||| || | ||| ||   |||||||||||||||||||||    
T  477772 actcacaacatccatgttaatagcataaaacgtcaaagtacctacgcctacaaatatgactatattca 477839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 700 - 783
Target Start/End: Original strand, 26742207 - 26742290
Alignment:
Q  700 atgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    |||||| | ||||| |||||| | | ||||| ||||||||||||||||||| |||| ||||  |||||||||||||||||||||    
T  26742207 atgaatctgtgaacaaactcacatcatccatgttaatagcataaaacggcaaaatatatatgcctacaaatatgactatattca 26742290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 616 - 750
Target Start/End: Original strand, 29266556 - 29266688
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||||||||| ||||| |||||||||| |||||||||||  ||||||||||||| || |||| ||  || |||   ||||| |||||  | ||||| |    
T  29266556 acaaaagtaaacgatattcattcattcaaattgatagagtacattgatacaatacaaattcaaattcgctagaaa--caaaaggatgaaactgtgaacaa 29266653  T
Q  716 actcagaacttccatattaatagcataaaacggca 750  Q
    ||||| | | ||||| |||||||||||||||||||    
T  29266654 actcacagcatccatgttaatagcataaaacggca 29266688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 635 - 781
Target Start/End: Original strand, 626230 - 626375
Alignment:
Q  635 attcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatatta 734  Q
    |||||||||| |||||||||||  | ||||||||||| || |||| |   ||||||   ||||| |||||||| ||||| | |||| ||| ||||| |||    
T  626230 attcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaaca-aaaaggatgaatatgtgaacaagctcacaacatccatgtta 626328  T
Q  735 atagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||||||||||||||| | |||  ||  |||||||||||||||||||    
T  626329 atagcataaaacggcaaagtacccatgcctacaaatatgactatatt 626375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 616 - 746
Target Start/End: Original strand, 8517111 - 8517240
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  ||||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  8517111 acaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatttgtgaacaa 8517209  T
Q  716 actcagaacttccatattaatagcataaaac 746  Q
    ||| | ||  ||||| |||||||||||||||    
T  8517210 actaacaatatccatgttaatagcataaaac 8517240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 629 - 783
Target Start/End: Original strand, 38943822 - 38943975
Alignment:
Q  629 atatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttcc 728  Q
    ||||| |||||||||| |||||||||||  | ||||||||||| |||||||  |  ||||||   ||||| |||||| | ||||| |||||| | | |||    
T  38943822 atattcattcattcaaattgatagagtacatcgatacaatacaaatccaaatccgctaaaaaca-aaaaggatgaatctgtgaacaaactcatatcatcc 38943920  T
Q  729 atattaatagcataaaacggcagaatacatatatctacaaatatgactatattca 783  Q
    || |||||||||||||||| || | ||  |||  |||||||||||||||||||||    
T  38943921 atgttaatagcataaaacgacaaagtatttatgcctacaaatatgactatattca 38943975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Original strand, 43244033 - 43244193
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||    ||||||||||| ||||||| ||  | |||||  ||||| |||||| | | ||| |    
T  43244033 acaaaaataaacgatattcattcattcaaattgatagagtacaccgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtaaacaa 43244131  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||| ||||| ||||||||||||| ||||| | | | |||  |||||||||||||||    
T  43244132 actcacaacatccatgttaatagcataaaccggcaaagtgcttatgcctacaaatatgacta 43244193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 616 - 755
Target Start/End: Original strand, 18502494 - 18502632
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||||||| || |||||||||||  | ||||||||||| ||||||| ||  | |||||  ||||| |||||| | ||||| |    
T  18502494 acaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaa 18502592  T
Q  716 actcagaacttccatattaatagcataaaacggcagaata 755  Q
    ||||| |   ||||| ||||||||||||||||||| ||||    
T  18502593 actcacagaatccatgttaatagcataaaacggcaaaata 18502632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 618 - 777
Target Start/End: Complemental strand, 50801669 - 50801511
Alignment:
Q  618 aaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaac 717  Q
    |||||||||| ||||| ||| |||||| ||||||||||   |  ||| |||||| ||||||| ||  |||||| | |||||  ||||| | ||||| |||    
T  50801669 aaaagtaaacgatattcatttattcaaattgatagagtgcatcaataaaatacaaatccaaattcgctaaaaa-taaaaaggctgaatctgtgaacaaac 50801571  T
Q  718 tcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| ||| ||||| ||| ||||||||||||||| | ||| |||  |||||||||||||||    
T  50801570 tcacaacatccatgttagtagcataaaacggcaaagtacctatgcctacaaatatgacta 50801511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 687 - 781
Target Start/End: Complemental strand, 3673872 - 3673778
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatatt 781  Q
    |||||| ||||| | |||| | ||||| |||||| ||| ||||| ||||||||||||||||||| | |||| |   |||||||||||||||||||    
T  3673872 aaaaataaaaaggacgaatctgtgaacaaactcacaacatccatgttaatagcataaaacggcaaagtacacaagcctacaaatatgactatatt 3673778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 623 - 777
Target Start/End: Complemental strand, 31522408 - 31522255
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| |||||||||||  | |||||||||||  |||||| ||  | |||||  ||||| |||||| | ||||| |||||| |    
T  31522408 taaacgatattcattcattcaaattgatagagtacatcgatacaatacaagtccaaattcgct-aaaaacaaaaaggatgaatctgtgaacaaactcaca 31522310  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || ||| | ||||||||||||||||| | | ||| |||  || ||||||||||||    
T  31522309 acatccttgttaatagcataaaacggaaaagtacttatgcctgcaaatatgacta 31522255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 717 - 787
Target Start/End: Original strand, 34115416 - 34115486
Alignment:
Q  717 ctcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    |||||||| ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  34115416 ctcagaacatccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 34115486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 623 - 777
Target Start/End: Complemental strand, 39838056 - 39837903
Alignment:
Q  623 taaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcaga 722  Q
    ||||| ||||| |||||||||| ||| |||||||| |  |||||||| | ||||||| |   ||||||   ||||| |||||| | ||||| |||||| |    
T  39838056 taaacgatattcattcattcaaattgttagagtatatcaatacaatagaaatccaaatttgctaaaaaca-aaaaggatgaatctgtgaacaaactcaca 39837958  T
Q  723 acttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    || |||||  |||||||||||||||||| | ||| |||  |||||||||||||||    
T  39837957 acatccatggtaatagcataaaacggcaaagtacctatgcctacaaatatgacta 39837903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 787
Target Start/End: Complemental strand, 9662230 - 9662137
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||||| |||||  ||||| | | ||||| ||||||||||||||||||| | ||||  | |||||| ||||||||||||| |||||    
T  9662230 aaaaggatgaatatgtgaacagactcacatcatccatgttaatagcataaaacggcaaagtacaattgtctacacatatgactatatttaaatc 9662137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1049 - 1086
Target Start/End: Complemental strand, 17853618 - 17853581
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgct 1086  Q
    |||||||||||||||||| |||||||||||||||||||    
T  17853618 tggctgcaactttggtggcaggtgcatttctctctgct 17853581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 787
Target Start/End: Complemental strand, 23926418 - 23926325
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| | ||||| |||||| ||| || || |||||||||| |||||||| | ||||||   ||||||||||||||||||| |||||    
T  23926418 aaaaggatgaatctgtgaacaaactcacaacatctatgttaatagcatcaaacggcaaagtacataagcctacaaatatgactatattaaaatc 23926325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 616 - 705
Target Start/End: Complemental strand, 24826108 - 24826019
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaat 705  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | |||| |||||| ||||||| || ||||||||  ||||| ||||||    
T  24826108 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatagaatacaaatccaaattcgttaaaaaacaaaaaggatgaat 24826019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 3159431 - 3159264
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||| ||||  | ||||||||||| || |||||||| | |||||  ||||| |||||| |   ||| |    
T  3159431 acaaaattaaactatattcattcattcaaattgataaagtacatcgatacaatacaaattcaaagtcact-aaaaacaaaaaggatgaatctgcaaacaa 3159333  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
     |||| ||  ||||| |||||||||| |||| ||| | ||| |||  |||||||||||||||| |||||    
T  3159332 tctcacaatatccatgttaatagcatgaaacagcaaagtacttatgcctacaaatatgactatgttcaa 3159264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 694 - 774
Target Start/End: Complemental strand, 25658559 - 25658479
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatga 774  Q
    |||| ||||||| | ||||| |||||| ||| ||||| || |||||||||||||||| | |||||||  ||||||||||||    
T  25658559 aaaataatgaatttgtgaacaaactcacaacatccatgttgatagcataaaacggcaaagtacatatgcctacaaatatga 25658479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 732 - 784
Target Start/End: Original strand, 26623980 - 26624032
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||||||||| || | || ||||||||| |||||||||||||||||||||||    
T  26623980 ttaatagcatacaatgacataatacatatgtctacaaatatgactatattcaa 26624032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 687 - 787
Target Start/End: Original strand, 35658261 - 35658361
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaat 786  Q
    |||||| ||||  |||||| ||||||| |||||| | | ||||| |||||||||||||||  || | ||||||  | |||||||||||||||||| ||||    
T  35658261 aaaaataaaaatgatgaatttatgaacaaactcacatcatccatgttaatagcataaaacaacaaagtacataagtttacaaatatgactatattaaaat 35658360  T
Q  787 c 787  Q
    |    
T  35658361 c 35658361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 687 - 746
Target Start/End: Complemental strand, 6408829 - 6408770
Alignment:
Q  687 aaaaattaaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaac 746  Q
    |||||| ||||| |||||||| ||||| |||||| ||| ||||| |||||||||||||||    
T  6408829 aaaaataaaaaggatgaatatgtgaacaaactcacaacatccattttaatagcataaaac 6408770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 616 - 671
Target Start/End: Original strand, 24611450 - 24611505
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaataca 671  Q
    |||||||||||  ||||| |||||||||| |||||||||||  |||||||||||||    
T  24611450 acaaaagtaaatgatattcattcattcaaattgatagagtacattgatacaataca 24611505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 635 - 774
Target Start/End: Original strand, 32616530 - 32616668
Alignment:
Q  635 attcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcagaacttccatatta 734  Q
    |||||||||| |||||||||||  | |||| |||||| || |||| ||  ||||||   |||||| ||||||| ||||| |||||  ||| |||||  ||    
T  32616530 attcattcaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaacaaaaaaga-tgaatatgtgaacaaactcttaacatccatgcta 32616628  T
Q  735 atagcataaaacggcagaatacatatatctacaaatatga 774  Q
    |||||||||||||||| | | |||||  ||||||||||||    
T  32616629 atagcataaaacggcaaagtgcatatgcctacaaatatga 32616668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 726 - 777
Target Start/End: Complemental strand, 39523770 - 39523719
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||||| ||||||||||||||||||| | |||||||  |||||||||||||||    
T  39523770 tccatgttaatagcataaaacggcaaattacatatgcctacaaatatgacta 39523719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 694 - 784
Target Start/End: Complemental strand, 5814723 - 5814633
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| |||||| | ||||| |||||| ||| ||||| |||||||||||||| || | | ||  |||  ||||||||||||||||||||||    
T  5814723 aaaaggatgaatctgtgaacaaactcacaacatccatgttaatagcataaaatggaaaagtatttatgcctacaaatatgactatattcaa 5814633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 690
Target Start/End: Complemental strand, 19745859 - 19745785
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaa 690  Q
    |||||| ||||| ||||| | ||||| || |||||||||||| | ||||||||||| ||||||| || |||||||    
T  19745859 acaaaaataaacgatattcaatcatttaaattgatagagtatatcgatacaatacaaatccaaattcgttaaaaa 19745785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 690
Target Start/End: Original strand, 19793947 - 19794021
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaa 690  Q
    |||||| ||||| ||||| | ||||| || |||||||||||| | ||||||||||| ||||||| || |||||||    
T  19793947 acaaaaataaacgatattcaatcatttaaattgatagagtatatcgatacaatacaaatccaaattcgttaaaaa 19794021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 735 - 784
Target Start/End: Original strand, 9229701 - 9229750
Alignment:
Q  735 atagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||||||| ||| |||| ||||||| ||||||||||| |||||||||||    
T  9229701 atagcataacacgacagagtacatatgtctacaaatataactatattcaa 9229750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 787
Target Start/End: Complemental strand, 9549784 - 9549723
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||||||||||||||||| | |||| || |||| | ||||||||||||| |||||    
T  9549784 tccatgttaatagcataaaacggcaaagtacaaatgtctatacatatgactatatttaaatc 9549723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 50981451 - 50981544
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||| | ||||| |||||| ||| ||||| |||||| ||||||||  || | ||||||   ||||||||||||||||||| |||||    
T  50981451 aaaagtatgaatttgtgaacaaactcacaacatccatgttaatatcataaaacaacaaagtacataagcctacaaatatgactatattaaaatc 50981544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 616 - 784
Target Start/End: Complemental strand, 35544 - 35377
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| |||||||||| |||||||||||  | ||||||||||| ||||||| |   | |||||  ||||| || ||| | ||||| |    
T  35544 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatccaaatttgct-aaaaacaaaaaggataaatttgtgaacaa 35446  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    ||||| ||| ||||| ||||||||||||||| | | | |||||||  ||| ||||||||| ||||||||    
T  35445 actcacaacatccatgttaatagcataaaacagtaaagtacatatgcctataaatatgacaatattcaa 35377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 694 - 787
Target Start/End: Original strand, 25249 - 25342
Alignment:
Q  694 aaaagaatgaatatatgaacgaactcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| |||||||| ||||  |||||| ||| ||||| |||||||||||||| |||| | ||||||   ||||||||||||||||||| |||||    
T  25249 aaaaggatgaatatgtgaataaactcacaacatccatgttaatagcataaaatggcaaagtacataggcctacaaatatgactatattaaaatc 25342  T

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Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 616 - 777
Target Start/End: Complemental strand, 74633 - 74473
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| ||||| ||| ||| || |||||||||||  | ||||||||||| ||||||| ||  ||||||   ||||| |||||| | ||||| |    
T  74633 acaaaaataaacgatattcatttatttaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaaca-aaaaggatgaatctgtgaacaa 74535  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    | ||| ||| ||||| ||||||||||||||||||| | ||| | |  |||||||||||||||    
T  74534 agtcacaacatccatgttaatagcataaaacggcaaagtacctgtgcctacaaatatgacta 74473  T

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Target: scaffold1379 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 732 - 784
Target Start/End: Original strand, 848 - 900
Alignment:
Q  732 ttaatagcataaaacggcagaatacatatatctacaaatatgactatattcaa 784  Q
    |||||| |||||||||||| ||||| ||| |||||||||||||||||||||||    
T  848 ttaataacataaaacggcaaaatacttatgtctacaaatatgactatattcaa 900  T

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Target: scaffold0321 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 623 - 777
Target Start/End: Original strand, 6788 - 6942
Alignment:
Q  623 taaacaatatttattcatt-caagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacgaactcag 721  Q
    ||||| ||||| ||||||| ||| |||||||||||  | ||||||||||| || |||| ||  ||||||   ||||| |||||| | ||||| ||||||     
T  6788 taaacgatattcattcatttcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaaca-aaaaggatgaatctgtgaacaaactcac 6886  T
Q  722 aacttccatattaatagcataaaacggcagaatacatatatctacaaatatgacta 777  Q
    ||| ||||| |||||||||||||| || | | |||||||  |||||||||||||||    
T  6887 aacatccatgttaatagcataaaatggtaaagtacatatgcctacaaatatgacta 6942  T

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Target: scaffold0288 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 772
Target Start/End: Complemental strand, 21062 - 20907
Alignment:
Q  616 acaaaagtaaacaatatttattcattcaagttgatagagtatgttgatacaatacagatccaaagtcattaaaaaattaaaagaatgaatatatgaacga 715  Q
    |||||| ||||| || || |||||||||| |||||||||||  | ||| |||||||  |||||| ||| ||||||   ||||| |||||| | | ||| |    
T  21062 acaaaaataaacgattttcattcattcaaattgatagagtacatcgatccaatacaattccaaattcactaaaaaca-aaaaggatgaatctttaaacaa 20964  T
Q  716 actcagaacttccatattaatagcataaaacggcagaatacatatatctacaaatat 772  Q
    ||||| | | ||||| |||||||||||||||| || | |||||||  ||||||||||    
T  20963 actcacatcatccatgttaatagcataaaacgacaaagtacatatccctacaaatat 20907  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 726 - 787
Target Start/End: Original strand, 9427 - 9488
Alignment:
Q  726 tccatattaatagcataaaacggcagaatacatatatctacaaatatgactatattcaaatc 787  Q
    ||||| ||||||||||||||||||| | |||| ||  ||||| ||||||||||||| |||||    
T  9427 tccatgttaatagcataaaacggcaaagtacaaatgcctacacatatgactatatttaaatc 9488  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000004; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1049 - 1086
Target Start/End: Complemental strand, 136586 - 136549
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgct 1086  Q
    |||||||||||||||||||||| || ||||||||||||    
T  136586 tggctgcaactttggtgggaggggcttttctctctgct 136549  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1049 - 1086
Target Start/End: Complemental strand, 146637 - 146600
Alignment:
Q  1049 tggctgcaactttggtgggaggtgcatttctctctgct 1086  Q
    |||||||||||||||||||||| || ||||||||||||    
T  146637 tggctgcaactttggtgggaggggcttttctctctgct 146600  T

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