View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9055_low_41 (Length: 329)
Name: NF9055_low_41
Description: NF9055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9055_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 88 - 273
Target Start/End: Complemental strand, 32377529 - 32377342
Alignment:
| Q |
88 |
cttagaatatggattattatcctattctacctctattgtggttaaaaaatatagggcacctttattggtttcaatgttgcaaccgagtatttcaatgata |
187 |
Q |
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| T |
32377529 |
cttagaatatggattattatcctattctacctctattgtggttaaaaaatatagggcacatttattggtttcaatgttgcaaccgagtatttcaatgata |
32377430 |
T |
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| Q |
188 |
tgttgtgagtgttgaaagtccaat--tttatgtgttcaatttagggtaatattgatcaaggagtgagatcaaaaccataaagaattat |
273 |
Q |
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| T |
32377429 |
tgttgtgagtgttgaaagtccaattgtgtatgtgttcaatttagggtaatattgatcaaggagtgagatcaaaaccataaagaattat |
32377342 |
T |
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