View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9056_low_49 (Length: 242)
Name: NF9056_low_49
Description: NF9056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9056_low_49 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 499436 - 499670
Alignment:
| Q |
8 |
tggacatcatgaaattcttttgctgtattttaattaagatgataatcgctaaacaatgaagaaaaagccaacacatgaagccaaacgtctcatccgtttt |
107 |
Q |
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| T |
499436 |
tggacattatgaaattcttttgctgtattttaattaagatgataatcgctacacaatgaagaaaaagccaacacatgaagccaaacgtctcacccgtttt |
499535 |
T |
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| Q |
108 |
ggactaacctcatttccaataatttgttgattataacgtccaaggatcaaggttcttgtcatgctgtttactactttttaaattatattccgtttcattt |
207 |
Q |
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| T |
499536 |
ggactaacctcatttccaataatttgttgattataatgtccaaggatcaaggttcttgtcatgctgtttactactttttaaattatattccgtttcattt |
499635 |
T |
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| Q |
208 |
cattcacgtttttatagaactataagtaatttttt |
242 |
Q |
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| T |
499636 |
cattcacgtttttttacaactataagtaatttttt |
499670 |
T |
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