View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9057_low_2 (Length: 370)
Name: NF9057_low_2
Description: NF9057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9057_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 354; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 1 - 358
Target Start/End: Original strand, 10158953 - 10159310
Alignment:
| Q |
1 |
tctttagggcgtccatgtacttctcgttttgagaacacccagatatcaaagcagtccaagacaccacattaggagtgattccggaactcttgatccgatt |
100 |
Q |
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| T |
10158953 |
tctttagggcgtccatgtacttctcgttttgagaacacccagatatcaaagcagtccaagacaccacattaggagtgattccggaactcttgatccgatt |
10159052 |
T |
|
| Q |
101 |
gatgatagtcaaagcttcatcgatacggccttgcattgaataaccagaaaccaaaccgttccatgtcactaaatcaggtgttatcccttcttccaccatt |
200 |
Q |
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| T |
10159053 |
gatgatagtcaaagcttcatcgatacggccttgcattgaataaccagaaaccaaaccgttccatgtcactaaatcaggtgttatcccttcttccaccatt |
10159152 |
T |
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| Q |
201 |
tggttcaatagttttacggcttcaccaaactgtcccttgaaggagtagcctgatatcaacgaattccaagcgcaaacgtttttgtttttcgcacgatgga |
300 |
Q |
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| T |
10159153 |
tggttcaatagttttacggcttcaccaaactgtcccttgaaggagtagcctgatatcaacgaattccaagcgcaaacgtttttgtttttcgcacgatgga |
10159252 |
T |
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| Q |
301 |
acactgcctgagctttttctaagcaatcattcttaacatacatatccaccagtgatgt |
358 |
Q |
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| T |
10159253 |
gcactgcctgagctttttctaagcaatcattcttaacatacatatccaccagtgatgt |
10159310 |
T |
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