View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9059_low_32 (Length: 295)
Name: NF9059_low_32
Description: NF9059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9059_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 32515337 - 32515071
Alignment:
| Q |
1 |
tcatatctcaataaatatctagctacacagtaaaatgtgatgttgatcctacctatattaagacctaaagcgatagacgtaaacttaagcctcgttttta |
100 |
Q |
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||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| |
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| T |
32515337 |
tcatatctcaataaatatctagctacacattta-------tgttgatcctacctatattaagacctaaagcgatagacgtata---aggcctcgttttta |
32515248 |
T |
|
| Q |
101 |
ctgactcaaacatatatgaccttgcaataatcaataatattgacgtagaggtgttggcgcaacatgaaaatgtcacgttgaacatgaatttggaggtcta |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32515247 |
ctgactcaaacatatatgaccttgcaataatcaataaaattgacgtagaggtgttggcgcaacatgaaaatgtcacgttgaacatgaatttggaggtcta |
32515148 |
T |
|
| Q |
201 |
tctacaacacgaaaaaacctggaggctcaagagatttggttttgacatacataccttatgttcaccaaaatgatcaa |
277 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32515147 |
tctacaacatgaaaaaacctggaggctcaagagatttggttttgacatacataccttatgttcaccaaaatgatcaa |
32515071 |
T |
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