View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9060_low_51 (Length: 240)
Name: NF9060_low_51
Description: NF9060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9060_low_51 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 38931338 - 38931561
Alignment:
| Q |
1 |
tgtagaggtaaacccattgggcactaagatgaagcaatttgagaactgggagagtcaaactattgacattcgttatacgacctgctcttgggttaaacac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38931338 |
tgtagaggtaaacccattgggcactaagatgaagcaatttgagaactgggagagtcaaactattgacattcgttatacgacctgctcttgggttaaacac |
38931437 |
T |
|
| Q |
101 |
atcggcacgtgaaggatcagctatgttctcatgaagcttcaatgtgcaaacggtttcatcgaagaagttgtgttgttcttcatgttctctggttcttgtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
38931438 |
atcggcacgtgaaggatcagctatgttctcatgaagcttcaatgtgcaaacagtttcatcgaagaagttgtgttgtccttcatgttctctggttcttgtt |
38931537 |
T |
|
| Q |
201 |
ctctcaccatggcttctttctttt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
38931538 |
ctctcaccatggcttctttctttt |
38931561 |
T |
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