View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9060_low_56 (Length: 222)

Name: NF9060_low_56
Description: NF9060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9060_low_56
NF9060_low_56
[»] chr7 (44 HSPs)
chr7 (92-203)||(45433234-45433346)
chr7 (92-203)||(30244263-30244375)
chr7 (92-203)||(45754709-45754820)
chr7 (92-203)||(1085669-1085781)
chr7 (92-203)||(7517573-7517685)
chr7 (92-203)||(30245070-30245182)
chr7 (92-203)||(23430-23542)
chr7 (92-203)||(7554018-7554130)
chr7 (107-203)||(19122740-19122836)
chr7 (92-203)||(22566715-22566827)
chr7 (92-175)||(43241488-43241572)
chr7 (106-203)||(11845198-11845296)
chr7 (92-203)||(34218087-34218199)
chr7 (92-203)||(45434629-45434741)
chr7 (92-203)||(22567092-22567203)
chr7 (101-203)||(29157567-29157670)
chr7 (101-199)||(37533067-37533166)
chr7 (94-203)||(6054555-6054665)
chr7 (102-203)||(37533417-37533519)
chr7 (92-186)||(24177428-24177523)
chr7 (91-179)||(8128518-8128607)
chr7 (92-164)||(36109009-36109082)
chr7 (92-203)||(16569189-16569301)
chr7 (92-203)||(16596361-16596473)
chr7 (92-199)||(36939790-36939898)
chr7 (92-203)||(40094827-40094939)
chr7 (92-179)||(47129088-47129176)
chr7 (101-203)||(14681512-14681615)
chr7 (92-186)||(28301613-28301708)
chr7 (92-203)||(1085301-1085414)
chr7 (20-62)||(32919322-32919364)
chr7 (92-193)||(41910657-41910759)
chr7 (92-164)||(30245487-30245560)
chr7 (92-164)||(30255332-30255405)
chr7 (94-205)||(36622955-36623067)
chr7 (94-203)||(9901640-9901748)
chr7 (92-164)||(30244694-30244767)
chr7 (92-203)||(118354-118466)
chr7 (144-203)||(28300306-28300366)
chr7 (92-203)||(30032560-30032672)
chr7 (140-203)||(30253534-30253597)
chr7 (94-179)||(40230368-40230454)
chr7 (92-203)||(24838754-24838867)
chr7 (92-176)||(36534864-36534949)
[»] chr3 (55 HSPs)
chr3 (92-203)||(37990692-37990804)
chr3 (92-203)||(43346844-43346956)
chr3 (91-199)||(35946514-35946623)
chr3 (92-203)||(33803305-33803417)
chr3 (92-203)||(52634669-52634780)
chr3 (94-203)||(29644634-29644744)
chr3 (92-203)||(32462953-32463066)
chr3 (92-203)||(32589697-32589808)
chr3 (92-203)||(3135126-3135236)
chr3 (92-203)||(25739478-25739590)
chr3 (92-203)||(29644955-29645067)
chr3 (92-203)||(37991030-37991142)
chr3 (92-203)||(53118028-53118139)
chr3 (92-203)||(54017869-54017981)
chr3 (101-203)||(22304571-22304674)
chr3 (92-201)||(41359820-41359926)
chr3 (92-203)||(12114615-12114727)
chr3 (92-203)||(21832396-21832508)
chr3 (124-200)||(33362349-33362425)
chr3 (92-203)||(42342441-42342553)
chr3 (92-186)||(45901706-45901802)
chr3 (101-203)||(4823657-4823760)
chr3 (101-203)||(39389072-39389175)
chr3 (92-181)||(25755387-25755477)
chr3 (121-203)||(39935008-39935090)
chr3 (101-174)||(50612534-50612608)
chr3 (92-203)||(8327897-8328009)
chr3 (92-203)||(15773185-15773297)
chr3 (92-203)||(42342143-42342255)
chr3 (95-203)||(1634367-1634477)
chr3 (92-173)||(33175747-33175829)
chr3 (101-182)||(51886563-51886645)
chr3 (92-192)||(9240142-9240243)
chr3 (96-203)||(15772851-15772959)
chr3 (92-179)||(49336764-49336852)
chr3 (95-164)||(11661531-11661601)
chr3 (90-203)||(47964968-47965082)
chr3 (92-164)||(31190010-31190083)
chr3 (92-203)||(39914245-39914357)
chr3 (119-203)||(42584875-42584959)
chr3 (92-151)||(43346643-43346703)
chr3 (92-203)||(54018251-54018363)
chr3 (101-151)||(22304248-22304299)
chr3 (92-186)||(44160614-44160709)
chr3 (92-203)||(22304008-22304113)
chr3 (102-186)||(7767384-7767469)
chr3 (92-163)||(32462651-32462724)
chr3 (101-164)||(37726506-37726570)
chr3 (92-203)||(45395706-45395818)
chr3 (119-186)||(11661972-11662039)
chr3 (152-203)||(17731957-17732008)
chr3 (152-203)||(19033188-19033239)
chr3 (140-203)||(46546378-46546441)
chr3 (92-149)||(53577357-53577415)
chr3 (92-151)||(3135566-3135626)
[»] chr2 (45 HSPs)
chr2 (92-203)||(15880256-15880368)
chr2 (92-203)||(16542442-16542554)
chr2 (101-203)||(36178658-36178761)
chr2 (92-203)||(6421378-6421490)
chr2 (119-203)||(36178224-36178308)
chr2 (101-203)||(14745720-14745823)
chr2 (101-203)||(37106190-37106293)
chr2 (92-205)||(38796671-38796785)
chr2 (101-203)||(5543051-5543154)
chr2 (92-186)||(31899496-31899591)
chr2 (101-203)||(37105926-37106029)
chr2 (94-203)||(35580777-35580886)
chr2 (92-203)||(28531367-28531479)
chr2 (92-203)||(40679682-40679794)
chr2 (101-203)||(36178322-36178425)
chr2 (101-203)||(41283528-41283631)
chr2 (92-203)||(962591-962703)
chr2 (92-203)||(42514642-42514754)
chr2 (101-203)||(5542678-5542781)
chr2 (92-203)||(28254290-28254402)
chr2 (92-199)||(36005937-36006044)
chr2 (92-203)||(37895114-37895226)
chr2 (92-182)||(6712969-6713060)
chr2 (120-203)||(15511548-15511631)
chr2 (94-176)||(40733512-40733595)
chr2 (104-205)||(33731653-33731755)
chr2 (92-164)||(38796310-38796383)
chr2 (96-175)||(1769889-1769969)
chr2 (92-151)||(36785668-36785728)
chr2 (92-186)||(12529098-12529193)
chr2 (105-203)||(14745347-14745446)
chr2 (92-203)||(31468803-31468911)
chr2 (96-173)||(7598606-7598684)
chr2 (90-179)||(37632674-37632764)
chr2 (94-173)||(40733878-40733958)
chr2 (120-186)||(28254182-28254248)
chr2 (92-163)||(5367448-5367520)
chr2 (119-203)||(6422131-6422215)
chr2 (92-203)||(33561504-33561616)
chr2 (92-203)||(33953824-33953936)
chr2 (92-146)||(6421297-6421352)
chr2 (92-156)||(29676896-29676961)
chr2 (122-203)||(31259669-31259750)
chr2 (94-194)||(37894754-37894855)
chr2 (119-163)||(40163466-40163510)
[»] chr5 (44 HSPs)
chr5 (94-203)||(26074607-26074717)
chr5 (101-203)||(18603173-18603276)
chr5 (101-203)||(32487396-32487498)
chr5 (101-203)||(6500453-6500555)
chr5 (106-203)||(11417030-11417128)
chr5 (91-203)||(13415813-13415926)
chr5 (95-203)||(40296368-40296477)
chr5 (92-199)||(26075219-26075327)
chr5 (92-203)||(42405649-42405761)
chr5 (105-203)||(41170640-41170739)
chr5 (92-203)||(3295398-3295508)
chr5 (92-203)||(6224189-6224301)
chr5 (92-203)||(12662705-12662817)
chr5 (92-199)||(26074839-26074947)
chr5 (120-203)||(9498707-9498790)
chr5 (101-203)||(6500825-6500927)
chr5 (101-193)||(27502099-27502192)
chr5 (92-203)||(299482-299594)
chr5 (92-203)||(15370092-15370204)
chr5 (92-203)||(26074199-26074311)
chr5 (92-203)||(41632775-41632887)
chr5 (95-185)||(3295086-3295176)
chr5 (92-203)||(25327928-25328040)
chr5 (101-203)||(29549308-29549411)
chr5 (92-186)||(42508605-42508700)
chr5 (94-199)||(35150002-35150107)
chr5 (92-185)||(36492288-36492382)
chr5 (92-176)||(1028597-1028682)
chr5 (101-161)||(7768852-7768913)
chr5 (92-203)||(24489259-24489369)
chr5 (91-203)||(36568620-36568733)
chr5 (92-203)||(34753078-34753190)
chr5 (101-203)||(624198-624301)
chr5 (101-167)||(5723880-5723947)
chr5 (94-166)||(300954-301027)
chr5 (119-203)||(33747792-33747876)
chr5 (124-203)||(15370428-15370507)
chr5 (101-178)||(26074320-26074398)
chr5 (92-179)||(39309677-39309764)
chr5 (137-203)||(2411046-2411112)
chr5 (137-203)||(26590963-26591029)
chr5 (92-185)||(31509616-31509710)
chr5 (92-185)||(35167909-35168003)
chr5 (92-163)||(35914842-35914914)
[»] scaffold0078 (2 HSPs)
scaffold0078 (92-203)||(5350-5462)
scaffold0078 (92-203)||(4975-5087)
[»] chr8 (51 HSPs)
chr8 (92-203)||(3038343-3038455)
chr8 (92-203)||(34834869-34834981)
chr8 (101-203)||(1013924-1014027)
chr8 (101-203)||(3669689-3669792)
chr8 (92-203)||(30359602-30359714)
chr8 (92-203)||(33113420-33113532)
chr8 (101-199)||(45121967-45122066)
chr8 (94-203)||(45122110-45122220)
chr8 (92-203)||(9482657-9482767)
chr8 (95-203)||(34835205-34835314)
chr8 (92-203)||(30359264-30359376)
chr8 (101-203)||(20870626-20870731)
chr8 (92-203)||(45121709-45121820)
chr8 (102-186)||(3037778-3037865)
chr8 (92-176)||(8794104-8794189)
chr8 (119-203)||(5420672-5420756)
chr8 (101-203)||(3670062-3670165)
chr8 (92-186)||(9309348-9309443)
chr8 (97-183)||(18372676-18372762)
chr8 (92-186)||(25561886-25561981)
chr8 (92-203)||(40518062-40518176)
chr8 (102-203)||(147454-147556)
chr8 (123-203)||(9483240-9483320)
chr8 (92-183)||(18373004-18373095)
chr8 (92-203)||(37544543-37544655)
chr8 (92-183)||(41972151-41972243)
chr8 (92-203)||(43274832-43274944)
chr8 (94-179)||(1513992-1514078)
chr8 (92-203)||(6876915-6877028)
chr8 (101-203)||(30441083-30441190)
chr8 (94-203)||(40518577-40518687)
chr8 (91-179)||(9608737-9608826)
chr8 (122-203)||(45122648-45122729)
chr8 (92-203)||(70327-70438)
chr8 (102-164)||(18372791-18372854)
chr8 (124-203)||(32305503-32305582)
chr8 (106-164)||(41416263-41416322)
chr8 (137-203)||(9507821-9507887)
chr8 (102-163)||(18372349-18372411)
chr8 (95-203)||(34835470-34835580)
chr8 (95-203)||(34835736-34835846)
chr8 (103-203)||(18380070-18380171)
chr8 (92-203)||(8918817-8918929)
chr8 (119-203)||(18372047-18372131)
chr8 (101-203)||(6731906-6732000)
chr8 (101-175)||(40579587-40579662)
chr8 (92-184)||(9308970-9309065)
chr8 (119-164)||(25561736-25561781)
chr8 (95-151)||(45123002-45123059)
chr8 (101-164)||(1014337-1014401)
chr8 (92-157)||(147822-147888)
[»] chr6 (36 HSPs)
chr6 (92-203)||(16107671-16107783)
chr6 (92-203)||(2377747-2377859)
chr6 (92-203)||(16454568-16454680)
chr6 (104-203)||(32460633-32460733)
chr6 (92-186)||(16108056-16108151)
chr6 (101-203)||(29518505-29518608)
chr6 (101-203)||(29518922-29519025)
chr6 (101-203)||(32741181-32741284)
chr6 (101-203)||(3409261-3409364)
chr6 (101-203)||(26544051-26544154)
chr6 (101-203)||(35210206-35210309)
chr6 (101-186)||(2378128-2378214)
chr6 (92-203)||(2843547-2843660)
chr6 (103-203)||(3415462-3415563)
chr6 (119-203)||(1127381-1127465)
chr6 (92-203)||(2578496-2578607)
chr6 (92-203)||(10074416-10074528)
chr6 (101-203)||(3058228-3058331)
chr6 (101-203)||(14748391-14748494)
chr6 (92-201)||(2579927-2580037)
chr6 (94-186)||(9062419-9062512)
chr6 (92-203)||(16454900-16455012)
chr6 (101-199)||(593766-593865)
chr6 (120-203)||(1846770-1846853)
chr6 (101-185)||(3409662-3409747)
chr6 (92-203)||(10911558-10911671)
chr6 (92-203)||(1950238-1950350)
chr6 (92-199)||(10074048-10074156)
chr6 (121-186)||(5958673-5958738)
chr6 (92-203)||(10073669-10073779)
chr6 (92-174)||(5832108-5832191)
chr6 (92-203)||(8481920-8482031)
chr6 (92-158)||(2579203-2579270)
chr6 (94-203)||(6999849-6999959)
chr6 (104-205)||(2579543-2579645)
chr6 (119-164)||(35210499-35210544)
[»] chr1 (49 HSPs)
chr1 (92-203)||(17294570-17294682)
chr1 (92-203)||(34364918-34365030)
chr1 (101-205)||(44290509-44290614)
chr1 (101-203)||(3550722-3550825)
chr1 (101-199)||(44290882-44290981)
chr1 (92-203)||(26661575-26661687)
chr1 (92-203)||(41157368-41157480)
chr1 (92-186)||(29798192-29798287)
chr1 (92-186)||(41184495-41184590)
chr1 (95-203)||(11977276-11977385)
chr1 (92-203)||(37556104-37556216)
chr1 (92-203)||(31767214-31767326)
chr1 (92-203)||(34364500-34364612)
chr1 (92-186)||(41142365-41142460)
chr1 (101-177)||(3537226-3537303)
chr1 (92-203)||(24600367-24600479)
chr1 (92-203)||(34649431-34649543)
chr1 (92-203)||(40082400-40082511)
chr1 (92-206)||(66522-66637)
chr1 (92-186)||(3875401-3875496)
chr1 (101-203)||(32594769-32594872)
chr1 (107-203)||(14318875-14318972)
chr1 (92-176)||(37850680-37850765)
chr1 (119-203)||(3537652-3537736)
chr1 (92-203)||(5320018-5320130)
chr1 (92-203)||(22077548-22077660)
chr1 (92-203)||(26661951-26662063)
chr1 (92-203)||(38804408-38804520)
chr1 (92-203)||(41156984-41157096)
chr1 (101-203)||(41759485-41759588)
chr1 (102-176)||(50052103-50052178)
chr1 (95-173)||(45084378-45084457)
chr1 (101-203)||(48588541-48588644)
chr1 (92-164)||(37555723-37555796)
chr1 (92-203)||(30630691-30630803)
chr1 (92-163)||(39066293-39066365)
chr1 (103-203)||(9955911-9956014)
chr1 (94-184)||(22077900-22077991)
chr1 (132-203)||(44043825-44043896)
chr1 (119-186)||(45494044-45494115)
chr1 (120-203)||(66140-66224)
chr1 (92-167)||(4878796-4878872)
chr1 (120-180)||(5528830-5528890)
chr1 (92-179)||(21378118-21378206)
chr1 (92-186)||(44685449-44685545)
chr1 (120-203)||(10351182-10351265)
chr1 (92-203)||(22793271-22793384)
chr1 (123-183)||(22077183-22077243)
chr1 (92-147)||(45839620-45839675)
[»] scaffold0391 (2 HSPs)
scaffold0391 (92-205)||(1157-1271)
scaffold0391 (92-149)||(3092-3150)
[»] scaffold0734 (2 HSPs)
scaffold0734 (92-191)||(5770-5870)
scaffold0734 (92-164)||(5389-5462)
[»] scaffold0702 (2 HSPs)
scaffold0702 (92-203)||(567-679)
scaffold0702 (101-164)||(234-298)
[»] chr4 (64 HSPs)
chr4 (92-203)||(4955368-4955480)
chr4 (92-203)||(34646700-34646812)
chr4 (92-203)||(41707516-41707627)
chr4 (92-186)||(52884880-52884975)
chr4 (92-203)||(54108908-54109017)
chr4 (92-203)||(54936193-54936301)
chr4 (92-203)||(25483329-25483441)
chr4 (92-176)||(45489409-45489494)
chr4 (92-203)||(20825829-20825941)
chr4 (108-203)||(44620362-44620458)
chr4 (91-186)||(52884687-52884783)
chr4 (101-203)||(50630806-50630909)
chr4 (101-203)||(55933175-55933278)
chr4 (92-201)||(22028014-22028124)
chr4 (92-205)||(36572012-36572126)
chr4 (101-202)||(49880162-49880264)
chr4 (92-203)||(10245913-10246024)
chr4 (92-203)||(20826210-20826322)
chr4 (92-203)||(36629230-36629342)
chr4 (96-203)||(54017646-54017754)
chr4 (92-186)||(39404391-39404486)
chr4 (101-203)||(41370359-41370462)
chr4 (92-186)||(49076516-49076611)
chr4 (102-180)||(50459724-50459803)
chr4 (92-203)||(1731698-1731810)
chr4 (92-203)||(2740693-2740805)
chr4 (92-203)||(2741064-2741176)
chr4 (101-203)||(16888867-16888970)
chr4 (93-179)||(49076906-49076992)
chr4 (94-203)||(3340802-3340912)
chr4 (121-203)||(18932800-18932882)
chr4 (94-203)||(39404013-39404123)
chr4 (92-165)||(44620289-44620363)
chr4 (91-203)||(39792911-39793024)
chr4 (92-203)||(22183315-22183427)
chr4 (92-203)||(36608712-36608824)
chr4 (21-65)||(39599461-39599505)
chr4 (93-176)||(44620654-44620738)
chr4 (119-203)||(44621023-44621107)
chr4 (119-203)||(45496826-45496910)
chr4 (92-203)||(50002419-50002531)
chr4 (92-186)||(3244519-3244614)
chr4 (120-203)||(6975507-6975590)
chr4 (102-203)||(49302907-49303011)
chr4 (119-164)||(54343091-54343136)
chr4 (92-203)||(3341121-3341233)
chr4 (92-171)||(3700358-3700438)
chr4 (92-203)||(32941174-32941286)
chr4 (119-203)||(54017753-54017837)
chr4 (91-164)||(54741268-54741342)
chr4 (92-164)||(4390191-4390264)
chr4 (101-205)||(16889585-16889690)
chr4 (93-165)||(44621420-44621493)
chr4 (101-174)||(54108540-54108612)
chr4 (91-186)||(10246339-10246435)
chr4 (92-165)||(44620937-44621012)
chr4 (92-150)||(19504698-19504757)
chr4 (92-203)||(22028420-22028534)
chr4 (153-203)||(3271842-3271892)
chr4 (101-150)||(50788087-50788137)
chr4 (117-186)||(48111766-48111835)
chr4 (92-204)||(51768110-51768223)
chr4 (89-180)||(34004658-34004749)
chr4 (97-199)||(40067041-40067145)
[»] scaffold0171 (1 HSPs)
scaffold0171 (92-186)||(17526-17621)
[»] scaffold0027 (1 HSPs)
scaffold0027 (120-186)||(47382-47448)
[»] scaffold0504 (1 HSPs)
scaffold0504 (92-175)||(10192-10276)


Alignment Details
Target: chr7 (Bit Score: 77; Significance: 7e-36; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 45433234 - 45433346
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| | |||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||    
T  45433234 tgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaagat 45433333  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  45433334 tttgggtaagagt 45433346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 30244263 - 30244375
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||||||||||| | ||||||||||| ||| |||||||||||| ||||||||||||||||||||| | |    
T  30244263 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggactcataaacccattgccttaaggt 30244362  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  30244363 tttgggtaagagt 30244375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 45754709 - 45754820
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatt 191  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||| |||||||||| |||||||||||  |||||||||||||| |||||| | ||    
T  45754709 tgttgtgtacaagtgtgagttatatgtccacatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggtt 45754808  T
Q  192 ttgagtaagagt 203  Q
    ||| ||||||||    
T  45754809 ttgggtaagagt 45754820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 1085781 - 1085669
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| ||||||||||||||  |||||||||||| || |||||||||||||||||| | |    
T  1085781 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggt 1085682  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  1085681 tttgggtaagagt 1085669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 7517573 - 7517685
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||| | |    
T  7517573 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 7517672  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  7517673 tttgggtaagagt 7517685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 30245070 - 30245182
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||||||  || ||||||| |||||||||| | |    
T  30245070 tgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaaggt 30245169  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  30245170 tttgggtaagagt 30245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 23542 - 23430
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||| ||||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||| || |||||||| ||||||||| | |    
T  23542 tgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggt 23443  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  23442 tttgggtaagagt 23430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 7554018 - 7554130
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||||| |||||| | |    
T  7554018 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggt 7554117  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  7554118 tttgggtaagagt 7554130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 19122740 - 19122836
Alignment:
Q  107 tgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||| | ||||| ||||||||    
T  19122740 tgagttatatgtccacatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaagagt 19122836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 22566827 - 22566715
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| | ||||||||||| ||| || ||||||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||| | |    
T  22566827 tgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 22566728  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  22566727 tttgggtaagagt 22566715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 43241488 - 43241572
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaac 175  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| || ||||||||||    
T  43241488 tgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaac 43241572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 11845198 - 11845296
Alignment:
Q  106 gtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| || |||||| ||||||||||| | |||||  |||||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagt 11845296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 34218199 - 34218087
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||| |||||||||||  || |||||||||||||| | |||| |||||||||| ||||||| |||| |||||||||||||||| |||| | |    
T  34218199 tgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggt 34218100  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  34218099 tttgggtaagagt 34218087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 45434629 - 45434741
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||| ||||||| || ||||||||||||||| | ||||||||||||||| |||||||||||| || |||||||  | ||||||| | |    
T  45434629 tgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaaggt 45434728  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  45434729 tttgggtaagagt 45434741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 22567203 - 22567092
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatt 191  Q
    |||||| | ||||||||||| |||  |||||||||||||||| | ||||||||||||||| |||||||||||| || ||||||| |||||||||| | ||    
T  22567203 tgttgtatgcaagtgtgagtaatatgtccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtt 22567104  T
Q  192 ttgagtaagagt 203  Q
    ||  ||||||||    
T  22567103 tttggtaagagt 22567092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 29157567 - 29157670
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||| ||||||||||| ||||||||||||||| |||||||||||  || |||||| ||||||||||| | ||||| ||||    
T  29157567 caagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggtaa 29157666  T
Q  200 gagt 203  Q
    ||||    
T  29157667 gagt 29157670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 37533166 - 37533067
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||||||| || ||||||| |||||||||| | ||||| ||||    
T  37533166 caagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa 37533067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 6054555 - 6054665
Alignment:
Q  94 ttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    ||||| |||||||| |||||||  || |||||||||||||||| |||| |||||||||| |||||||||||| || ||||||| |||||||||| | |||    
T  6054555 ttgtggacaagtgttagttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaaggttt 6054654  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  6054655 tgggtaagagt 6054665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 203
Target Start/End: Complemental strand, 37533519 - 37533417
Alignment:
Q  102 aagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaag 200  Q
    |||||||||||||| |||| |||| | |||||||| ||||||||||||||| |||||||||||| || |||||| ||||||||||| | ||||| |||||    
T  37533519 aagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaag 37533420  T
Q  201 agt 203  Q
    |||    
T  37533419 agt 37533417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 24177428 - 24177523
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| ||||| ||||||||| || ||||||||||||||| | |||||| |||||||| |||||||||| | || ||||||||||||||||||    
T  24177428 tgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgcctta 24177523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 8128607 - 8128518
Alignment:
Q  91 ctgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    ||||||||| ||||||||||||||| || ||| |||||||| || ||||||||||||||||| |||| ||||||| || |||||||||||    
T  8128607 ctgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccat 8128518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 36109082 - 36109009
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||| ||||||||||||||| ||| |||||||||||||| | ||||||||||||||| ||||||||||||    
T  36109082 tgttgtgtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagag 36109009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 16569189 - 16569301
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| | |||||||||||||||  || ||||||||||| || | ||||||||||| ||| |||||||||||| || |||||||||||||||||| | |    
T  16569189 tgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggt 16569288  T
Q  191 tttgagtaagagt 203  Q
    |||  ||||||||    
T  16569289 ttttggtaagagt 16569301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 16596473 - 16596361
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| | |||||||||||||||  || ||||||||||| || | ||||||||||| ||| |||||||||||| || |||||||||||||||||| | |    
T  16596473 tgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggt 16596374  T
Q  191 tttgagtaagagt 203  Q
    |||  ||||||||    
T  16596373 ttttggtaagagt 16596361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 36939898 - 36939790
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||| ||| ||||||||||||||| || ||| |||| |||||||| |||| |||||||||| |||||||||||| || |||||| ||||||||||| | |    
T  36939898 tgttctgtgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaaggt 36939799  T
Q  191 tttgagtaa 199  Q
    |||| ||||    
T  36939798 tttgggtaa 36939790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 40094939 - 40094827
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || ||||||| |||||| | |||||||| |||||| |||||||||||| || ||||||||||| | |||| | |    
T  40094939 tgttgtgtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaaggt 40094840  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  40094839 tttgggtaagagt 40094827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 47129088 - 47129176
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    ||||||| ||||||||||||||||  || |||||||||||||||| ||||||||||||  | |||||||||||| || |||||||||||    
T  47129088 tgttgtgcacaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccat 47129176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 14681512 - 14681615
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||| ||||||| || ||||||| ||||||||| ||||||||||||||| | ||||||||||  | ||||||||||||| |||| | ||||| ||||    
T  14681512 caagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgggtaa 14681611  T
Q  200 gagt 203  Q
    ||||    
T  14681612 gagt 14681615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 28301708 - 28301613
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| |||||||||||||||  || ||||||||||| || | |||| | |||||||| |||||||||||| || ||||||||||||||||||    
T  28301708 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 1085414 - 1085301
Alignment:
Q  92 tgttgtgtacaagtgtgagttata--gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    |||||||| |||||||||||| |   || ||| ||||||||||||| |||| |||||||| |  |||||||||||||| ||||||| |||||||||| |     
T  1085414 tgttgtgtgcaagtgtgagtttttatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaacccataaactcattgccttaagg 1085315  T
Q  190 ttttgagtaagagt 203  Q
    ||||| ||||||||    
T  1085314 ttttgggtaagagt 1085301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 32919322 - 32919364
Alignment:
Q  20 ctttggtggaagatagcgcagaagaaggcaaccataaaaattt 62  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  32919322 ctttggtggaagatagcgcagaagaaggcaaccataaaaattt 32919364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 193
Target Start/End: Complemental strand, 41910759 - 41910657
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||  |||||||||||||| || ||||||||||||||| | ||||||||||| ||| ||||| | |||| || ||||||||||||| |||| |||    
T  41910759 tgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaacccattggcttaagat 41910660  T
Q  191 ttt 193  Q
    |||    
T  41910659 ttt 41910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 30245487 - 30245560
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||| ||||||||||||||| || ||||||| ||||||| | ||||||||||||||| ||||||||||||    
T  30245487 tgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagag 30245560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 30255332 - 30255405
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||| |||||||| |||||| || ||||||||||||||| | ||||||||||||||| ||||||||||||    
T  30255332 tgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 30255405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 36622955 - 36623067
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||||   |||||||| ||| |  |||||| ||||||||||| | |||    
T  36622955 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttt 36623054  T
Q  193 tgagtaagagtat 205  Q
    || ||| ||||||    
T  36623055 tgggtaggagtat 36623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 9901640 - 9901748
Alignment:
Q  94 ttgtgtacaagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatttt 193  Q
    ||||||| ||||||||||||||  |||||||||||||||| | ||||||||||||| | |||| || |||| |  ||||||| ||||| |||| | ||||    
T  9901640 ttgtgtataagtgtgagttatatgtccacatcggataaaacagtaaaggttgaacatcttatacgt-agaggatccataaactcattgtcttaaggtttt 9901738  T
Q  194 gagtaagagt 203  Q
    | ||||||||    
T  9901739 gggtaagagt 9901748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 30244694 - 30244767
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||| ||||||||||||||| || |||||| |||||||| | ||||||||||||||| ||||| ||||||    
T  30244694 tgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagag 30244767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 118466 - 118354
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||| ||||||| || ||||||| |||| || | |||||||||||||||  ||||||||||| |  |||||||||||| || || | |    
T  118466 tgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaaggt 118367  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  118366 tttgggtaagagt 118354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 28300366 - 28300306
Alignment:
Q  144 tgaacaccatataagtaagagaactc-ataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||| ||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  28300366 tgaacaccttataagtaagagaaccccataaacccattgccttaagattttgggtaagagt 28300306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 30032560 - 30032672
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||| ||||| |||||||||||| || |||||||| |||||| | |||  |||||||||| |||||||||||| |  |||||||| || |||||| | |    
T  30032560 tgttgcgtacatgtgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaaggt 30032659  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  30032660 tttgggtaagagt 30032672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 30253534 - 30253597
Alignment:
Q  140 aggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||| ||| ||||||||||||||| ||||||| |||||||||| | ||||| ||||||||    
T  30253534 aggttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagt 30253597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 40230454 - 40230368
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    |||||| ||||||| ||||||| || |||||||| |||||| | |||| |||||||| | |||||||||||| || |||||||||||    
T  40230454 ttgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccat 40230368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 24838867 - 24838754
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaag-agaactcataaacccattgccttatga 189  Q
    ||||||||| |||||| |||||||  || ||||||| |||||| | ||||||||||||||| |||||||||| || |  ||||||||| ||| |||| |     
T  24838867 tgttgtgtataagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaacccgttgtcttaagg 24838768  T
Q  190 ttttgagtaagagt 203  Q
    ||||| ||||||||    
T  24838767 ttttgggtaagagt 24838754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 36534949 - 36534864
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacc 176  Q
    |||||||| ||||||| | ||||| || |||| |||||||||| | || |||||||||||| |||||||||||| || ||||||||    
T  36534949 tgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacc 36534864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 37990804 - 37990692
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||||| |||||||||| |||||||||| | |    
T  37990804 tgttgtgtacaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaaggt 37990705  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  37990704 tttgggtaagagt 37990692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 43346956 - 43346844
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||| |||||||||| | |    
T  43346956 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaaggt 43346857  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  43346856 tttgggtaagagt 43346844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 35946514 - 35946623
Alignment:
Q  91 ctgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    ||||||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||| |||||||||||| || ||||||||| |||||||| |     
T  35946514 ctgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaagg 35946613  T
Q  190 ttttgagtaa 199  Q
    ||||| ||||    
T  35946614 ttttgggtaa 35946623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 33803417 - 33803305
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| ||| | |    
T  33803417 tgttgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggt 33803318  T
Q  191 tttgagtaagagt 203  Q
     ||| ||||||||    
T  33803317 attgggtaagagt 33803305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 52634669 - 52634780
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||||||||||| | |||||||||||| || |||||||||||| || |||||||||||||||||| | |    
T  52634669 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaagag-acccataaacccattgccttaaggt 52634767  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  52634768 tttgggtaagagt 52634780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 29644744 - 29644634
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||| ||||||||||||||| || ||||||||||| ||| | ||||||||||||||| ||||||||||||||| ||||||||||||| |||| | |||    
T  29644744 ttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccattgtcttaaggttt 29644645  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  29644644 tgggtaagagt 29644634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 32463066 - 32462953
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaa-ggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    |||||||||||||||||||||||| || |||||||||||| || | |||| ||||||| ||| |||||||||||  ||||||||||||||||||||| |     
T  32463066 tgttgtgtacaagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaagg 32462967  T
Q  190 ttttgagtaagagt 203  Q
    ||||||||||||||    
T  32462966 ttttgagtaagagt 32462953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 32589697 - 32589808
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||| ||| || ||||||  ||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||| | |    
T  32589697 tgttgtgtgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 32589795  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  32589796 tttgggtaagagt 32589808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 3135236 - 3135126
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||  ||||||| || ||||||||||||||||| |||| |||||||||| ||||||||| ||||| |||||||||| |||| || | |    
T  3135236 tgttgtgtacaagtg--agttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataaggt 3135139  T
Q  191 tttgagtaagagt 203  Q
    |||||||||||||    
T  3135138 tttgagtaagagt 3135126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 25739590 - 25739478
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| |||| |||||||| |||||||||||||| || ||||||| |||||| ||  | |    
T  25739590 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttaggt 25739491  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  25739490 tttgggtaagagt 25739478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 29645067 - 29644955
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||| ||||||| || ||||||||||||||| | |||||||| |||||| |||||||||||| || ||||||||||||| |||| | |    
T  29645067 tgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaaggt 29644968  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  29644967 tttgggtaagagt 29644955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 37991142 - 37991030
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||||||||||||||||||  || ||||| |||||||||| ||||||||||||||| |||||||||||| ||  |||||| ||| |||||| | |    
T  37991142 tgttgtgtacaagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaaggt 37991043  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  37991042 tttgggtaagagt 37991030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 53118139 - 53118028
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||  ||||||||||||||| |||||| ||||||||||| | ||||||||||||||| ||||||| |||| | ||| ||||||||||||||| |||    
T  53118139 tgttgtgggcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaagat 53118041  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  53118040 tttgggtaagagt 53118028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 54017981 - 54017869
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  ||| ||||||||||||| | ||||||||||||||| |||||||||||| ||||||||||| |  |||||| | |    
T  54017981 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaaggt 54017882  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  54017881 tttgggtaagagt 54017869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 22304571 - 22304674
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||| |||| || ||||||||||||||||| ||||||||||| ||| |||||||||||| || ||||||| |||||||||| | ||||| ||||    
T  22304571 caagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggtaa 22304670  T
Q  200 gagt 203  Q
    ||||    
T  22304671 gagt 22304674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 41359926 - 41359820
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatt 191  Q
    |||||||| ||||||||||||||    |||||||||||| |||| ||||||||||| ||| |||||||||||| || |||||||||||||||||| | ||    
T  41359926 tgttgtgtgcaagtgtgagttatc---ccacatcggatacaatagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtt 41359830  T
Q  192 ttgagtaaga 201  Q
    ||| ||||||    
T  41359829 ttgggtaaga 41359820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 12114727 - 12114615
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||| |||||||  ||| |||||||||| || | ||||||||||||||| |||||||||||| || ||||||||||||| |||| | |    
T  12114727 tgttgtgtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggt 12114628  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  12114627 tttgggtaagagt 12114615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 21832508 - 21832396
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||| ||| ||||||||||||||| || |||||| ||||| || | ||||||||||||||| |||||||||||| |||||||||| ||| |||||| | |    
T  21832508 tgttatgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggt 21832409  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  21832408 tttgggtaagagt 21832396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 200
Target Start/End: Complemental strand, 33362425 - 33362349
Alignment:
Q  124 tcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaag 200  Q
    |||||||||||||||||||||||| ||| |||||||||||| || |||||||||||| ||||| ||||||| |||||    
T  33362425 tcggataaaataataaaggttgaataccttataagtaagaggacccataaacccatttccttaagattttgggtaag 33362349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 42342553 - 42342441
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||| ||||||| | |||||||| |||||| |||||||||||| || |||||| |||||| |||| | |    
T  42342553 tgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaaggt 42342454  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  42342453 tttgggtaagagt 42342441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 45901706 - 45901802
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaa-ggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||||||||||||||||||| || ||||||||||||||| || ||| ||||||||||| |||||||||||| || ||||||| ||| ||||||    
T  45901706 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggcctta 45901802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 4823657 - 4823760
Alignment:
Q  101 caagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||||||  || |||||||||||||||| |||| ||| |||||| |||||||| ||| || ||||||| |||||||||| ||||||| ||||    
T  4823657 caagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaactcattgccttaagattttgggtaa 4823756  T
Q  200 gagt 203  Q
    ||||    
T  4823757 gagt 4823760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 39389072 - 39389175
Alignment:
Q  101 caagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||||||  ||| ||||||||||||||| ||||||||||||||| || || |||||| || ||||||||||||| |||| | ||||| ||||    
T  39389072 caagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttttgggtaa 39389171  T
Q  200 gagt 203  Q
    ||||    
T  39389172 gagt 39389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 25755387 - 25755477
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattg 181  Q
    ||||||||||||||||||||||||  || |||||| ||||||| | ||||||||||| ||| |||||||||||| ||||||||| ||||||    
T  25755387 tgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccattg 25755477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 39935090 - 39935008
Alignment:
Q  121 acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||| | ||||||||||||||| |||||||||||| |  ||||||||||||||||||   ||||||||||||||    
T  39935090 acatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaagttttgagtaagagt 39935008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 50612608 - 50612534
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaa 174  Q
    ||||||||||||||| || ||||||||||||||||| ||||| ||||||||| |||||||||||| |||||||||    
T  50612608 caagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaa 50612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 8327897 - 8328009
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||| | |||||| |||| | | ||||||||||||||| |||||||  | ||||||| | |    
T  8327897 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaacgtaatgccttaaggt 8327996  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  8327997 tttgggtaagagt 8328009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 15773185 - 15773297
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || |||||||| |||||| | |||| |||||||| | |||||||||||| |||||||| | ||||||||||   |    
T  15773185 tgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggactcataagctcattgccttaaagt 15773284  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  15773285 tttgggtaagagt 15773297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 42342255 - 42342143
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||| | ||| |||||||||||||||||| | |||| ||| ||  || |||||||||||| |||||||||| |||||||||| | |    
T  42342255 tgttgtgtgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggactcataaactcattgccttaaggt 42342156  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  42342155 tttgggtaagagt 42342143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 1634477 - 1634367
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcggataaaataataaa-ggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    ||||| ||||||||||||||| || |||||||||||| || |||||| |||| |||||  |||||||||||| || ||||||||||||| |||| | |||    
T  1634477 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttt 1634378  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  1634377 tgggtaagagt 1634367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 33175829 - 33175747
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataa 173  Q
    ||||||||||||||||||||||||  || |||||| |||| || | ||||||||||||||| ||||||||||||||| |||||    
T  33175829 tgttgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataa 33175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 51886563 - 51886645
Alignment:
Q  101 caagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgc 182  Q
    |||||||||||||||  || ||||||| |||||||| ||||||||||||| |||||||||||||| || ||||||| ||||||    
T  51886563 caagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaactcattgc 51886645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 9240142 - 9240243
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| ||||||||||||||| |  | |||| | |||||||| |||||||||||| || |||||| ||||| ||||| |||    
T  9240142 tgttgtgtgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggacccataaatccattaccttaagat 9240241  T
Q  191 tt 192  Q
    ||    
T  9240242 tt 9240243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 203
Target Start/End: Original strand, 15772851 - 15772959
Alignment:
Q  96 gtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttg 194  Q
    |||| ||||||||||||||| || ||| ||||||||||| | |||| |||||||||| |||||||||||| || ||||||| |||||| ||| | |||||    
T  15772851 gtgtgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaaggttttg 15772950  T
Q  195 agtaagagt 203  Q
      |||||||    
T  15772951 gataagagt 15772959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 49336852 - 49336764
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    |||||||||||||||||||||| |  || ||||||||||| || | |||||||||| |||| |||||||||||| || |||||||||||    
T  49336852 tgttgtgtacaagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccat 49336764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 11661531 - 11661601
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||| |||| |||| | ||||||||||||    
T  11661531 tgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagag 11661601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 203
Target Start/End: Complemental strand, 47965082 - 47964968
Alignment:
Q  90 actgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatg 188  Q
    |||||||||| ||||||||||||||| |||  |||||||||| || | |  ||||| ||||  |||||||| ||||  ||||||| |||||||||||| |    
T  47965082 actgttgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataagcccattgccttaag 47964983  T
Q  189 attttgagtaagagt 203  Q
    |||||| ||||||||    
T  47964982 attttgggtaagagt 47964968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 31190010 - 31190083
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||| ||||||||||| ||| || ||||||||||||||| | ||||||||||||||| ||||||| ||||    
T  31190010 tgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagag 31190083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 39914245 - 39914357
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || |||||| ||||||| | || |||||||||||| ||||| |||||| || |||||||| | |||||||  ||    
T  39914245 tgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacctaatgccttaatat 39914344  T
Q  191 tttgagtaagagt 203  Q
    ||||  |||||||    
T  39914345 tttggataagagt 39914357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 42584959 - 42584875
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||||| || | ||||| ||||||||| |||||||||||| |  |||||||| |||| |||| ||||||||| ||||||    
T  42584959 ccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaaccaattgtcttaagattttgagaaagagt 42584875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 43346643 - 43346703
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacacc 151  Q
    |||||||| |||||||||||| || || ||||||||||||||||| |||||||||||||||    
T  43346643 tgttgtgtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacacc 43346703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 54018363 - 54018251
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcca-catcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||| ||| |||||||||||||||  |||  |||||||||||| | ||||| ||||||||| |||||||||||| || |||||||| |  |||||| | |    
T  54018363 tgttatgtgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaaggt 54018264  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  54018263 tttgggtaagagt 54018251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 22304248 - 22304299
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacacc 151  Q
    ||||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  22304248 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacc 22304299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 44160709 - 44160614
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||| | ||||||| ||||||| ||| || || |||||||| ||||||||||||||||| ||||| |||||| |  ||||||||||||| ||||    
T  44160709 tgttgtatgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaacccattgtctta 44160614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 22304113 - 22304008
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| |||||||       | |||||||||| | || |||||||||||||||||| | |    
T  22304113 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggt-------cttataagtaagcggacccataaacccattgccttaaggt 22304021  T
Q  191 tttgagtaagagt 203  Q
    ||||  |||||||    
T  22304020 tttggataagagt 22304008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 7767469 - 7767384
Alignment:
Q  102 aagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||| ||||||||| || |||||||||||| || | ||||||||| ||||  ||||| |||||| |||||||||||||||| ||||    
T  7767469 aagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacccattgtctta 7767384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 32462724 - 32462651
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataat-aaaggttgaacaccatataagtaaga 163  Q
    |||||||||||||||||||||||| || |||||||| || ||| | | |||||||||||||| |||||||||||    
T  32462724 tgttgtgtacaagtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaaga 32462651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 37726506 - 37726570
Alignment:
Q  101 caagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||||||||||  || |||||||||||||||| |||| |||||| ||| ||||||||||||    
T  37726506 caagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaagag 37726570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 45395818 - 45395706
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||| |||||||  ||| |||||| |||||| | |||||||| |||||  |||||||||||| |  ||||||||||||| ||||   |    
T  45395818 tgttgtgtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaatgt 45395719  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  45395718 tttgggtaagagt 45395706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 11661972 - 11662039
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||| |||||||| | ||||||||||||||| || |||| ||||  |||||||||| |||||||||    
T  11661972 ccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaaccaattgcctta 11662039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 17732008 - 17731957
Alignment:
Q  152 atataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||| ||| |||| |||||||||||||||||| | ||||||||||||||    
T  17732008 atataagaaagggaacccataaacccattgccttaaggttttgagtaagagt 17731957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 19033239 - 19033188
Alignment:
Q  152 atataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||| ||| |||| |||||||||||||||||| | ||||||||||||||    
T  19033239 atataagaaagggaacccataaacccattgccttaaggttttgagtaagagt 19033188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 203
Target Start/End: Complemental strand, 46546441 - 46546378
Alignment:
Q  140 aggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||||  ||||||| ||||||  |||||||||||||||||| | ||||| ||||||||    
T  46546441 aggttgaacactttataagttagagaatccataaacccattgccttaaggttttgtgtaagagt 46546378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 53577357 - 53577415
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaaca 149  Q
    |||||||| |||||||||||||||  || |||||||||||||| | |||||||||||||    
T  53577357 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaaca 53577415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 3135626 - 3135566
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacacc 151  Q
    |||||||||||||||||||||||| || |||| || ||||||| | |||| ||||||||||    
T  3135626 tgttgtgtacaagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaacacc 3135566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 15880256 - 15880368
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||| | |    
T  15880256 tgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 15880355  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  15880356 tttgggtaagagt 15880368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 16542442 - 16542554
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||| |||||| ||| |||||| |||||||||| |||    
T  16542442 tgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgccttaagat 16542541  T
Q  191 tttgagtaagagt 203  Q
    |||||||||||||    
T  16542542 tttgagtaagagt 16542554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 36178761 - 36178658
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||| | ||||| ||||    
T  36178761 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 36178662  T
Q  200 gagt 203  Q
    ||||    
T  36178661 gagt 36178658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 6421378 - 6421490
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||| |||||||||||||||| || ||||||||||||||| | ||||||||||||||| |||||||||||| |||||||||| |||||||||  | |    
T  6421378 tgttgtgcacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgaggt 6421477  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  6421478 tttgggtaagagt 6421490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 36178308 - 36178224
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||| ||||||||    
T  36178308 ccacatcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagt 36178224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 14745823 - 14745720
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || |||||| |||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||| | ||||| ||||    
T  14745823 caagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 14745724  T
Q  200 gagt 203  Q
    ||||    
T  14745723 gagt 14745720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 37106190 - 37106293
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||| ||||| | ||||| ||||    
T  37106190 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggtaa 37106289  T
Q  200 gagt 203  Q
    ||||    
T  37106290 gagt 37106293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 38796785 - 38796671
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||| ||||||| ||||||||||||||||| |||||||||||| || |||||||| | ||||||| | |    
T  38796785 tgttgtgtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacctaatgccttaaggt 38796686  T
Q  191 tttgagtaagagtat 205  Q
    |||| ||||||||||    
T  38796685 tttgggtaagagtat 38796671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 5543154 - 5543051
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||| ||||||||| ||||||||||||||| |||||||||||| |  |||||||| ||||||||| ||||||| ||||    
T  5543154 caagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggtaa 5543055  T
Q  200 gagt 203  Q
    ||||    
T  5543054 gagt 5543051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 31899591 - 31899496
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    ||||||||  |||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||||| || ||||||| ||||||||||    
T  31899591 tgttgtgtgaaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 37105926 - 37106029
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || |||||||| |||||||| ||||||||||||||| |||||||||| | || ||||||| |||||||||| ||||||| ||||    
T  37105926 caagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagattttgggtaa 37106025  T
Q  200 gagt 203  Q
    ||||    
T  37106026 gagt 37106029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 35580886 - 35580777
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||| ||||||||||||||| || ||||||||||||||| |||||| |||||||||| ||||||| |||| || |||||||||||||||||| | |||    
T  35580886 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagaggac-cataaacccattgccttaaggttt 35580788  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  35580787 tgggtaagagt 35580777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 28531479 - 28531367
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || |||||||||||| || |  |||||||||||||| ||||||||||||  | ||||||| |||||||||| |||    
T  28531479 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtcccataaactcattgccttaagat 28531380  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  28531379 tttgggtaagagt 28531367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 40679794 - 40679682
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||| ||||||||||| || ||| |||||||| || | ||| ||||||||||| ||||||||||||||| ||||||||||| |||||| |||    
T  40679794 tgttgtgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagat 40679695  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  40679694 tttgggtaagagt 40679682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 36178425 - 36178322
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || |||| |||||||||||| ||||||| ||||||| |||||||||| | |||||||||||||||| |||| | ||||| ||||    
T  36178425 caagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggactcataaacccattgtcttaaggttttgggtaa 36178326  T
Q  200 gagt 203  Q
    ||||    
T  36178325 gagt 36178322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 41283631 - 41283528
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||| ||||||||||||| ||||||||||||||| |||||||||||| || ||||||| |||||||||| | ||||  ||||    
T  41283631 caagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttaggtaa 41283532  T
Q  200 gagt 203  Q
    ||||    
T  41283531 gagt 41283528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 962591 - 962703
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| | ||||||||||||||| || |||||||||||| || | ||||||||||||||| ||||||| |||| || ||||||||||||| |||| | |    
T  962591 tgttgtatgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggt 962690  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  962691 tttgggtaagagt 962703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 42514642 - 42514754
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| | |||||||||||||||  ||| ||||| |||| || | ||||||||||||||| |||||||||||| || ||||||||||| |||||| |||    
T  42514642 tgttgtatgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagat 42514741  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  42514742 tttgggtaagagt 42514754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 5542781 - 5542678
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||| |||| |||||||| ||||||||||||||| |||||||||||| || |||||||| ||||||||| | ||||  ||||    
T  5542781 caagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggtttttggtaa 5542682  T
Q  200 gagt 203  Q
    ||||    
T  5542681 gagt 5542678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 28254402 - 28254290
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| | ||||||| ||||| || |||||||||||| || | ||||||||||||| | |||||||||||| || ||||||| |||||||||| | |    
T  28254402 tgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggt 28254303  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  28254302 tttgggtaagagt 28254290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 36006044 - 36005937
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || |||||||| ||| || | |||| |||||||||| |||||||||||| || ||||||| |||||||||| | |    
T  36006044 tgttgtgtacaagtgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaaggt 36005946  T
Q  191 tttgagtaa 199  Q
    |||| ||||    
T  36005945 tttgggtaa 36005937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 37895226 - 37895114
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| | ||| ||||||||| || |||||||||||| || |||||| |||||| ||| || |||||| ||||| |||||||||||||||||| | |    
T  37895226 tgttgtgtgcgagtttgagttatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggt 37895127  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  37895126 tttgggtaagagt 37895114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 6712969 - 6713060
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgc 182  Q
    |||||| |||||||||||||||||  || |||||||||||||| | |||| |||||||||| |||||||||||| || |||||||| |||||    
T  6712969 tgttgtatacaagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattgc 6713060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 15511631 - 15511548
Alignment:
Q  120 cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||| ||||||||| | ||||||||||||||  |||||||||||| || ||||||||||||| |||| ||||||| ||||||||    
T  15511631 cacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagt 15511548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 40733512 - 40733595
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacc 176  Q
    |||||||||||||||||||||| || ||||||| ||||||| | |||| |||||||||| |||||||||||| || ||||||||    
T  40733512 ttgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggacccataaacc 40733595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 205
Target Start/End: Original strand, 33731653 - 33731755
Alignment:
Q  104 gtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagag 202  Q
    ||||||||||||  || |||||||||||||| | |||||||||| |||| |||||||||||| |  |||||||| ||||||||| | ||||| |||||||    
T  33731653 gtgtgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagag 33731752  T
Q  203 tat 205  Q
    |||    
T  33731753 tat 33731755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 38796383 - 38796310
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||| ||||||||||||||| || ||||||||||||||| | |||| |||||||||| ||||||||||||    
T  38796383 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagag 38796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 1769889 - 1769969
Alignment:
Q  96 gtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaac 175  Q
    |||| |||||||||||||||  || |||||||||||||| | |||| |||||||||| |||||||||||| ||||||||||    
T  1769889 gtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaac 1769969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 36785728 - 36785668
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacacc 151  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  36785728 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacc 36785668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 12529193 - 12529098
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||| | |||||||||||||||  ||| |||||  |||||| | ||||| ||||||||| |||||||||||| |||||||||| ||||||||||    
T  12529193 tgttgtatgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaactcattgcctta 12529098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 14745446 - 14745347
Alignment:
Q  105 tgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||| || |||||||| |||||||| ||| ||||||||| | | |||||| ||| || |||||||||||||||||| | ||||| ||||||||    
T  14745446 tgtgagttatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattgccttaaggttttgggtaagagt 14745347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 31468911 - 31468803
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| ||||||||||| | | ||    |||||| || ||||||| |||||||||| | |    
T  31468911 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatctta----taagaggacccataaactcattgccttaaggt 31468816  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  31468815 tttgggtaagagt 31468803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 7598606 - 7598684
Alignment:
Q  96 gtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataa 173  Q
    |||| ||||||||||||||| || ||||||| ||||||| | ||||||||||||||| |||||||||||| || |||||    
T  7598606 gtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggacccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 37632764 - 37632674
Alignment:
Q  90 actgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    |||||||||| ||||||||||||||| || | ||||||||||||||| ||||||||  |||   |||||||||||| || |||||||||||    
T  37632764 actgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccat 37632674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 40733878 - 40733958
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataa 173  Q
    |||||||||||||||||||||| || |||||||| |||||| | ||||| || |||||| ||||||||||||  |||||||    
T  40733878 ttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagggctcataa 40733958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 28254248 - 28254182
Alignment:
Q  120 cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    ||||||||||| || | ||||||||||||||  |||||||||||| |||||||||| | ||||||||    
T  28254248 cacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaacactttgcctta 28254182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 5367448 - 5367520
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaaga 163  Q
    ||||||||||||||||||  |||| || ||| ||||||||||| |  |||||||||||||| |||||||||||    
T  5367448 tgttgtgtacaagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaaga 5367520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 6422131 - 6422215
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||| ||||||| | ||||||||||||||  ||||| |||||| || ||||||||||| |||||| | ||||  ||||||||    
T  6422131 ccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagt 6422215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 33561616 - 33561504
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| |||||||||| |||| || | |  ||||| |||||  ||||||| |||| || ||||||| ||||| |||| | |    
T  33561616 tgttgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaactcattgtcttaaggt 33561517  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  33561516 tttgggtaagagt 33561504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 33953936 - 33953824
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||| ||||||||||| || ||||||| |||| || | |  ||||||||||| |||||||| |||| || ||||||||  ||||||||  ||    
T  33953936 tgttgtgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaacctgttgccttaaaat 33953837  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  33953836 tttgggtaagagt 33953824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 6421297 - 6421352
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttga 146  Q
    |||||||||||||||| ||||||| || ||||||||||||||| | ||||||||||    
T  6421297 tgttgtgtacaagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 29676896 - 29676961
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatata 156  Q
    |||||||| || |||||||||||| || ||||||||||||||| | |||||||| |||||| ||||    
T  29676896 tgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttata 29676961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 31259750 - 31259669
Alignment:
Q  122 catcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||||| | |||||||| |||||| |||||||||||  || |||||||| ||  ||||| | ||||| ||||||||    
T  31259750 catcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaacctatcaccttaaggttttgggtaagagt 31259669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 37894855 - 37894754
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||| ||| ||||||||||| || |||||| | ||| || | |||||| | || ||| |||||||||||  ||||||||| ||||||||||| |||||    
T  37894855 ttgtgtgcaaatgtgagttatatgtcccacattgaatagaaaagtaaaggctaaaaaccttataagtaagaagactcataaatccattgccttaagattt 37894756  T
Q  193 tg 194  Q
    ||    
T  37894755 tg 37894754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 163
Target Start/End: Complemental strand, 40163510 - 40163466
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaaga 163  Q
    |||||||||||| || | ||||||||||||||| |||||||||||    
T  40163510 ccacatcggatagaaaagtaaaggttgaacaccttataagtaaga 40163466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 26074607 - 26074717
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||||||||||||||||||| |||||| ||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||| | |||    
T  26074607 ttgtgtacaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttt 26074706  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  26074707 tgggtaagagt 26074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 18603276 - 18603173
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||| ||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||| | ||||| ||||    
T  18603276 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 18603177  T
Q  200 gagt 203  Q
    ||||    
T  18603176 gagt 18603173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 32487396 - 32487498
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||| | ||||| ||||    
T  32487396 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacc-tataagtaagaggacccataaacccattgccttaaggttttgggtaa 32487494  T
Q  200 gagt 203  Q
    ||||    
T  32487495 gagt 32487498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 6500453 - 6500555
Alignment:
Q  101 caagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaag 200  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||| |||||||||||| ||   |||||||||||||||| | ||||| |||||    
T  6500453 caagtgtgagttatatgtccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaaggttttgggtaag 6500552  T
Q  201 agt 203  Q
    |||    
T  6500553 agt 6500555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 11417128 - 11417030
Alignment:
Q  106 gtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||||||| | ||||| ||||||||    
T  11417128 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagt 11417030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 13415926 - 13415813
Alignment:
Q  91 ctgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    ||||||||| ||||||||||||||| || |||||||||||||| || ||||||||||||||| |||||||||||| || |||||||| ||| ||||| |     
T  13415926 ctgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaagg 13415827  T
Q  190 ttttgagtaagagt 203  Q
    ||||| ||||||||    
T  13415826 ttttgggtaagagt 13415813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 40296477 - 40296368
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatttt 193  Q
    ||||| ||||||||||||||| || |||||||||||||||||  |||||||||||||| |||||||||||| || |||||||||||||||||  | ||||    
T  40296477 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggtttt 40296378  T
Q  194 gagtaagagt 203  Q
    | ||||||||    
T  40296377 gggtaagagt 40296368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 26075327 - 26075219
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||| |||||  || |||||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||| | |    
T  26075327 tgttgtgtacaagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 26075228  T
Q  191 tttgagtaa 199  Q
    |||| ||||    
T  26075227 tttgggtaa 26075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 42405761 - 42405649
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcca-catcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||| || |||||| || ||||||||||| | ||||||| | |    
T  42405761 tgttgtgtacaagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggt 42405662  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  42405661 tttgggtaagagt 42405649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 41170640 - 41170739
Alignment:
Q  105 tgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||| || ||||||||||||||||| ||||||||||||| | |||||||||||| || |||||||||||||||||| | ||||| ||||||||    
T  41170640 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 41170739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 3295508 - 3295398
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||  |||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||| ||||||||| | |    
T  3295508 tgttgtgtggaagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaaggt 3295410  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  3295409 tttg-gtaagagt 3295398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 6224189 - 6224301
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || |||| |||||||||| | ||||||||||||||| |||||||||||| || ||||||| ||| |||||| | |    
T  6224189 tgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaaggt 6224288  T
Q  191 tttgagtaagagt 203  Q
    |||  ||||||||    
T  6224289 ttttggtaagagt 6224301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 12662817 - 12662705
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||||   ||||||||||| ||| |||||| |||||| |||| | |    
T  12662817 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattgtcttaagtt 12662718  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  12662717 tttgggtaagagt 12662705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 26074947 - 26074839
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||||||||||| | |||||||||||||| ||||||||| ||| || |||||||| |||| |||| | |    
T  26074947 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggacccataaacctattgtcttaaggt 26074848  T
Q  191 tttgagtaa 199  Q
    |||| ||||    
T  26074847 tttgggtaa 26074839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 9498790 - 9498707
Alignment:
Q  120 cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||| |||| |||| ||||||||||||||| |||||||||||| || |||||||||||||||||| ||||||| ||||||||    
T  9498790 cacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgggtaagagt 9498707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 6500825 - 6500927
Alignment:
Q  101 caagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaag 200  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||| ||||| ||| || || ||||||| |||||||||| | |||||  ||||    
T  6500825 caagtgtgagttatatgtccacatcggataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggataag 6500924  T
Q  201 agt 203  Q
    |||    
T  6500925 agt 6500927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 193
Target Start/End: Complemental strand, 27502192 - 27502099
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatttt 193  Q
    ||||||||||||||| || |||||| |||||||||| |||||||| |||||| |||||||||||| || |||||||| ||||||||| ||||||    
T  27502192 caagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaagatttt 27502099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 299482 - 299594
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||  ||||||||||||||| || ||||||||||||||| | ||||||||||||||| |||||||||||  || ||||||| ||| |||||| | |    
T  299482 tgttgtgcgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaaggt 299581  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  299582 tttgtgtaagagt 299594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 15370092 - 15370204
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || |||||||| |||||||| ||||||||||||| | |||||||||||| || |||||| |||  |||||| | |    
T  15370092 tgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaaggt 15370191  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  15370192 tttgggtaagagt 15370204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 26074311 - 26074199
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || |||||||||||||| | |||||||||||||||  ||| ||||||| || ||| |||||||||||||| | |    
T  26074311 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacccatgaacccattgccttaaggt 26074212  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  26074211 tttgggtaagagt 26074199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 41632775 - 41632887
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||| |||||||  || ||||||||||| || | ||||||||||||||| |||||||||||| || |||||||||| ||| ||| |||    
T  41632775 tgttgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagat 41632874  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  41632875 tttgggtaagagt 41632887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 185
Target Start/End: Complemental strand, 3295176 - 3295086
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctt 185  Q
    ||||| ||||||||||| ||| || ||||||||||||||||| ||||||||||||||| |||||||||||  || |||||||||||||||||    
T  3295176 tgtgtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaacccattgcctt 3295086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 25327928 - 25328040
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||  ||||||||||||||  ||| ||||||||||||| | |||| |||||||||| |||||||||||| || |||||||| | ||||||| | |    
T  25327928 tgttgtgtctaagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaaggt 25328027  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  25328028 tttgggtaagagt 25328040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 29549411 - 29549308
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| |||||| ||| ||||||||| |||||| ||||||||||||||||||||  || ||||||| |||| ||||| | |||||  |||    
T  29549411 caagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaacacattaccttaaggttttggataa 29549312  T
Q  200 gagt 203  Q
    ||||    
T  29549311 gagt 29549308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 42508605 - 42508700
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||||||||||||| |||||  ||| |||||||||| || | |||||||| |||| |  ||||||||||| |||||||||||||||||||||    
T  42508605 tgttgtgtacaagtgtgaattatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaacccattgcctta 42508700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 199
Target Start/End: Original strand, 35150002 - 35150107
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||| ||||||||||||||| || ||||||||||||||| | | ||||||||||||| |||||||||||| || |||||| |||||| |||| | |||    
T  35150002 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaagag-acccataaatccattgtcttaaggttt 35150100  T
Q  193 tgagtaa 199  Q
    || ||||    
T  35150101 tgggtaa 35150107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 36492382 - 36492288
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctt 185  Q
    |||||| | ||||||||||||||| || ||||||||||||||| | ||||||||||||||| |||||||||||| ||  |||||| |||| ||||    
T  36492382 tgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacattacctt 36492288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 1028682 - 1028597
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacc 176  Q
    |||||||||||||||||||||||| || |||||||||||| || | |||||| |||||||  |||||||||||| || ||||||||    
T  1028682 tgttgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacc 1028597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 7768852 - 7768913
Alignment:
Q  101 caagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaa 161  Q
    |||||||||||||||  ||| ||||||||||||||||||||||||||||||| |||||||||    
T  7768852 caagtgtgagttatatatcctacatcggataaaataataaaggttgaacaccttataagtaa 7768913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 24489369 - 24489259
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||| |||| || |  ||||||| |||||| ||| |||||||  || |||||||||||||||||| |||    
T  24489369 tgttgtgttcaagtgtgagttatatgtcccacatcagatagaaaagaaaaggttaaacaccttattagtaaga--acccataaacccattgccttaagat 24489272  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  24489271 tttgcgtaagagt 24489259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 36568733 - 36568620
Alignment:
Q  91 ctgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    ||||||||| ||||||||||||||| || |||||||||||| || | |||| |||||||||| ||||||| |||  || | |||||||||||||||| |     
T  36568733 ctgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaagg 36568634  T
Q  190 ttttgagtaagagt 203  Q
    ||||  ||||||||    
T  36568633 tttttggtaagagt 36568620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 34753190 - 34753078
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||| ||| ||||||| || |||||| ||||| || | |||| |||||||||| |||||||||||  || |||||||| ||||||||| | |    
T  34753190 tgttgtgtacaaatgtaagttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaaggt 34753091  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  34753090 tttgggtaagagt 34753078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 624198 - 624301
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || |||||| | |||||||| ||||||||||||||  |||||||||||  || ||||||||||| |||||  | ||||| ||||    
T  624198 caagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggtaa 624297  T
Q  200 gagt 203  Q
    ||||    
T  624298 gagt 624301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 5723947 - 5723880
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaac 167  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||  |||| ||||||||||    
T  5723947 caagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaac 5723880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 300954 - 301027
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaa 166  Q
    ||||||||||||||| |||||| || ||||||| ||||||| | ||||||||||| ||| ||||||||||||||    
T  300954 ttgtgtacaagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagagaa 301027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 33747792 - 33747876
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||||| |||||||| || ||  |||||||||||| |  ||||||| |||||||||| |||||||  |||||||    
T  33747792 ccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaagattttggataagagt 33747876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 15370428 - 15370507
Alignment:
Q  124 tcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||| ||| | |||| |||||||||| |||||||||||| || ||||||||||| |||||| | ||||| ||||||||    
T  15370428 tcggatgaaacagtaaatgttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagt 15370507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 26074320 - 26074398
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaaccca 178  Q
    ||||||||||||||| || ||||||| |||| || | ||||| ||||||||| |||||||||||| || ||||||||||    
T  26074320 caagtgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaaccca 26074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 39309677 - 39309764
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    |||||||||||||| ||||||||| || |||||||||||||||   |||| |||||||||  ||||| |||||| || |||||||||||    
T  39309677 tgttgtgtacaagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataagaggac-cataaacccat 39309764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 2411046 - 2411112
Alignment:
Q  137 taaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||| |||||||| | | ||||||||||||| |||||||  ||||||||| | ||||||||||||||    
T  2411046 taaaagttgaacatcttgtaagtaagagaacccataaacttattgccttaaggttttgagtaagagt 2411112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 26591029 - 26590963
Alignment:
Q  137 taaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||| |||||||||||| |  ||||||  || ||||||| | ||||||||||||||    
T  26591029 taaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagtaagagt 26590963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 185
Target Start/End: Original strand, 31509616 - 31509710
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctt 185  Q
    |||||||| |||||||||||||||  || ||||||||||| || | |  ||||||| |||  ||||||| |||| |||||||||| |||||||||    
T  31509616 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgcctt 31509710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 35168003 - 35167909
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctt 185  Q
    |||||||||||||| ||||||||   || |||||| ||||||| | ||||||||||||||| |||||||| ||  || |||||| | ||||||||    
T  35168003 tgttgtgtacaagtatgagttatgtatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaatctattgcctt 35167909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Original strand, 35914842 - 35914914
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaaga 163  Q
    ||||||||| |||| |||||||||  || |||||||||||||| | |||||||||||||   |||||||||||    
T  35914842 tgttgtgtataagtatgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaaga 35914914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 5350 - 5462
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| ||||||||||||||| || | ||||||||||||||| |||||||||||| || |||||||||||||||||| |||    
T  5350 tgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagat 5449  T
Q  191 tttgagtaagagt 203  Q
    ||||  |||||||    
T  5450 tttggataagagt 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 4975 - 5087
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||| |||||  || ||||||||| | || | |||||||| || | | ||||||||| |  || ||||||| |||||||||||| |    
T  4975 tgttgtgtgcaagtgtgaattatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaactcattgccttatggt 5074  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  5075 tttgggtaagagt 5087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 3038455 - 3038343
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  ||||||||| || || |||||||||||||||||| | |    
T  3038455 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaaggt 3038356  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  3038355 tttgggtaagagt 3038343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 34834869 - 34834981
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || |||||| |||||||||| |||||||| |||||| |||||||||||  |||||||||| |||||||||| | |    
T  34834869 tgttgtgtacaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaaggt 34834968  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  34834969 tttgggtaagagt 34834981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 1014027 - 1013924
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||||| ||  |||||||||||||||||   ||||||||||    
T  1014027 caagtgtgagttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaagaggaccaataaacccattgccttagagttttgagtaa 1013928  T
Q  200 gagt 203  Q
    ||||    
T  1013927 gagt 1013924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 3669689 - 3669792
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||| |||||||||| | ||||| ||||    
T  3669689 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaa 3669788  T
Q  200 gagt 203  Q
    ||||    
T  3669789 gagt 3669792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 30359602 - 30359714
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||||||||||||||||||  || |||||| ||||||| | |||| |||||||||| |||||||||||| ||||||||||||||  ||||| |||    
T  30359602 tgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagat 30359701  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  30359702 tttgggtaagagt 30359714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 33113532 - 33113420
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||| |||||||||  ||| ||||||||||||||| ||||||||||||  | |||||||||||| || ||||||| |||||||||| |||    
T  33113532 tgttgtgtacaagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaagat 33113433  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  33113432 tttgggtaagagt 33113420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 45122066 - 45121967
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || |||||||| |||||||| ||||||||||||||  |||||||||||| |||||||||| |||||||||| ||||||| ||||    
T  45122066 caagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttgggtaa 45121967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 45122220 - 45122110
Alignment:
Q  94 ttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||| |||||||||||||||  || |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||  |||| | |||    
T  45122220 ttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttt 45122121  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  45122120 tgggtaagagt 45122110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 9482767 - 9482657
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||  ||||||| ||||||||| |||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||| | |||    
T  9482767 tgttgtgtacaagtg--agttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctaaagat 9482670  T
Q  191 tttgagtaagagt 203  Q
    ||||  |||||||    
T  9482669 tttgtataagagt 9482657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 34835205 - 34835314
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatttt 193  Q
    |||||||||| |||||||||| || ||||||| ||||||||| ||||||||||||||| |||||||||||| || ||||||| ||||||||||   ||||    
T  34835205 tgtgtacaagggtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaagtttt 34835304  T
Q  194 gagtaagagt 203  Q
    | ||||||||    
T  34835305 gggtaagagt 34835314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 30359264 - 30359376
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||||||||||||||||||  || |||||||||||||| | |||| |||||||||| |||||| ||||| || ||||||||||| |||||| | |    
T  30359264 tgttgtgtacaagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggt 30359363  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  30359364 tttgggtaagagt 30359376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 20870731 - 20870626
Alignment:
Q  101 caagtgtgagttata---gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagt 197  Q
    |||||||||||||||   |||||||||| ||||||||| ||||||||||||| | |||||||||||| || |||||||||| ||||||| |||||||  |    
T  20870731 caagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaagattttggat 20870632  T
Q  198 aagagt 203  Q
    ||||||    
T  20870631 aagagt 20870626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 45121820 - 45121709
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatt 191  Q
    ||||||||||||||||||||| | || ||||||||||||||| | |||||||||| |||| |||||||||||| |  |||||||| |  |||||| | ||    
T  45121820 tgttgtgtacaagtgtgagttgttgtcccacatcggataaaagagtaaaggttgatcaccttataagtaagaggatccataaacctacagccttaaggtt 45121721  T
Q  192 ttgagtaagagt 203  Q
    ||||||||||||    
T  45121720 ttgagtaagagt 45121709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 3037865 - 3037778
Alignment:
Q  102 aagtgtgagttata---gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    ||||||||||||||   |||||||||||||| ||||| |||| |||||||||| |||||||||||| |||||||||||||||| ||||    
T  3037865 aagtgtgagttatatatgttccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaacccattgtctta 3037778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 8794104 - 8794189
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacc 176  Q
    ||||||||||||||||||||||||  || |||||||||||||| |||||| |||||||| | |||||||||||| |||||||||||    
T  8794104 tgttgtgtacaagtgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaacc 8794189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 5420672 - 5420756
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||||| |||| ||||||||||||| | |||||||||||| ||||||||||||||||||||| | ||||  ||||||||    
T  5420672 ccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaaggttttttgtaagagt 5420756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 3670062 - 3670165
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| |||||||| |||||| |||||||| ||| || |||||||| ||| ||||| | ||||| ||||    
T  3670062 caagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaaggttttgggtaa 3670161  T
Q  200 gagt 203  Q
    ||||    
T  3670162 gagt 3670165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 9309348 - 9309443
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| ||||||||||||||| || ||||||||||||||| | |||| |||||||||| |||||||||||| || | ||||| ||||||||||    
T  9309348 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggacccttaaactcattgcctta 9309443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 183
Target Start/End: Complemental strand, 18372762 - 18372676
Alignment:
Q  97 tgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcc 183  Q
    ||||||||||||| ||||| ||||||  |||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||    
T  18372762 tgtacaagtgtgatttatatgttccatttcggataaaatagtaaaggttgaacact-tataagtaagaggactcataaacccattgcc 18372676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 25561981 - 25561886
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||| ||||||||||||||||| || ||||||||||||||| | |||| |||||||||| |||||||||||| || ||||||| ||||| ||||    
T  25561981 tgttgtctacaagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaactcattgtctta 25561886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 40518062 - 40518176
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataa--taaaggttgaacaccatataagtaagagaactcataaacccattgccttatg 188  Q
    |||||||| ||||||||||||||| ||||||||| |||||||| ||  ||||||||||||||| |||||||||  | || |||||||||| ||||||| |    
T  40518062 tgttgtgttcaagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaag 40518161  T
Q  189 attttgagtaagagt 203  Q
     ||||| ||||||||    
T  40518162 gttttgggtaagagt 40518176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 147454 - 147556
Alignment:
Q  102 aagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaag 200  Q
    |||||||||||||| || ||||||||||||||| | ||||||||||||||| ||||| |||||| || |||||||| |||||||||   ||||| |||||    
T  147454 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaag 147553  T
Q  201 agt 203  Q
    |||    
T  147554 agt 147556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 123 - 203
Target Start/End: Complemental strand, 9483320 - 9483240
Alignment:
Q  123 atcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||| | ||||||||||||||| |||||||||||| || ||||||||||||| |||| | ||||| ||||||||    
T  9483320 atcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagt 9483240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 18373095 - 18373004
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcc 183  Q
    ||||||||||| |||||| ||||| || |||| |||||||||||| ||||||||||||||| ||||| |||||| |||||||||| |||||||    
T  18373095 tgttgtgtaca-gtgtgatttatatgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggactcataaactcattgcc 18373004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 37544655 - 37544543
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||| ||||||||||||||||  || |||||||||||||||| ||||||||||||||  |||||| ||||| || |||||| ||||| | ||| | |    
T  37544655 tgttgtgcacaagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaatccattactttaaggt 37544556  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  37544555 tttgggtaagagt 37544543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 41972151 - 41972243
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcc 183  Q
    |||||||| ||||||||||||||| || |||||||||||| || | ||||||||||||||| ||||||| | || || |||||||||||||||    
T  41972151 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccattgcc 41972243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 43274944 - 43274832
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||| |||||||||||||| ||| |||||| ||||||| | ||||||||||| |   |||||||||||| || |||||||| |||| |||| | |    
T  43274944 tgttgtgtataagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaaggt 43274845  T
Q  191 tttgagtaagagt 203  Q
    |||||||||||||    
T  43274844 tttgagtaagagt 43274832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 1514078 - 1513992
Alignment:
Q  94 ttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    |||||||||||| |||||||||  ||| ||||||||||||| | ||||||||||||||| |||||||||||| || | |||||||||    
T  1514078 ttgtgtacaagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccat 1513992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 6877028 - 6876915
Alignment:
Q  92 tgttgtgtacaagtgtgagttata--gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    |||||||| |||||||||||||||  || ||||||||||||||| | ||||||||||||||| ||||| |||||  || |||| || ||||| |||| |     
T  6877028 tgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccatacactcattgtcttaggg 6876929  T
Q  190 ttttgagtaagagt 203  Q
    ||||| ||||||||    
T  6876928 ttttgggtaagagt 6876915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 30441083 - 30441190
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacacc----atataagtaagagaactcataaacccattgccttatgattttga 195  Q
    ||||||||||||||| || ||||||||| ||||||| |||||||||||||||     ||||||||||||  | |||||||||||||||||| | |||||     
T  30441083 caagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgccttaaggttttgg 30441182  T
Q  196 gtaagagt 203  Q
    ||||||||    
T  30441183 gtaagagt 30441190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 40518577 - 40518687
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||| ||||||||||||||| || ||||||| |||| || | ||||||||||||||| ||||| |||||| || |||||||||| || |||| | |||    
T  40518577 ttgtgttcaagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttt 40518676  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  40518677 tgggtaagagt 40518687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 9608737 - 9608826
Alignment:
Q  91 ctgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    ||||||||| ||||||||||||||| || ||| |||||||| || | ||||||||||||||| |||||||||||  || |||||||||||    
T  9608737 ctgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccat 9608826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 122 - 203
Target Start/End: Original strand, 45122648 - 45122729
Alignment:
Q  122 catcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||||||| ||||||||||||||| |||||||||||| || ||||||| ||||| |||| | ||||| ||| ||||    
T  45122648 catcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagt 45122729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 70438 - 70327
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||||||  |||||||||| || ||||||||||||||| | |||| |||||||| | |||||||||||| || |||||||||| ||||||| | |    
T  70438 tgttgtgtacaaa-gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggt 70340  T
Q  191 tttgagtaagagt 203  Q
    |||  ||||||||    
T  70339 tttaggtaagagt 70327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 18372854 - 18372791
Alignment:
Q  102 aagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    ||||||||||||||  || |||||||||||||||| ||||||||||||||| ||||||||||||    
T  18372854 aagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagag 18372791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 203
Target Start/End: Original strand, 32305503 - 32305582
Alignment:
Q  124 tcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||||| ||||||||||||||| |||||||||||  ||  ||||||||||| ||||| |||||||  |||||||    
T  32305503 tcggataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccattaccttaagattttggataagagt 32305582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 41416322 - 41416263
Alignment:
Q  106 gtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  41416322 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 41416263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 203
Target Start/End: Original strand, 9507821 - 9507887
Alignment:
Q  137 taaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||| ||||| | ||||| ||||||||    
T  9507821 taaaggttgaataccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagt 9507887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 18372411 - 18372349
Alignment:
Q  102 aagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaaga 163  Q
    ||||||||||||||  || |||||||||||||||| ||||||||||||||| |||||||||||    
T  18372411 aagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaaga 18372349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 34835470 - 34835580
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcg-gataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||||||| |||||||||| || |||| ||  ||||||||| |||||||| |||||| |||||||||||| || ||||||| ||||||||||   |||    
T  34835470 tgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttt 34835569  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  34835570 tgggtaagagt 34835580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 34835736 - 34835846
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcg-gataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||||||| |||||||||| || |||| ||  ||||||||| |||||||| |||||| |||||||||||| || ||||||| ||||||||||   |||    
T  34835736 tgtgtacaagggtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttt 34835835  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  34835836 tgggtaagagt 34835846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 18380171 - 18380070
Alignment:
Q  103 agtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaaga 201  Q
    |||||||||||||  ||| |||||| |||||||| ||||||||||||||| |||||||||| |  |  ||||||||| | ||||| | ||||||||||||    
T  18380171 agtgtgagttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaacccactaccttaaggttttgagtaaga 18380072  T
Q  202 gt 203  Q
    ||    
T  18380071 gt 18380070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 8918929 - 8918817
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||| | || ||||||| ||||  | | ||||||||||||||  |||||||||||| || |||||||| |||| |||| | |    
T  8918929 tgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattgacttaaggt 8918830  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  8918829 tttgggtaagagt 8918817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 18372131 - 18372047
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||  |||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||| ||| | ||||| ||||||||    
T  18372131 ccacatccaataaaatagtaaaggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagt 18372047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 6731906 - 6732000
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||         |||||||||||| ||||||  |||||||||| | ||||||||||    
T  6731906 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttga---------aagtaagagaacccataaattcattgccttaaggttttgagtaa 6731996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 40579662 - 40579587
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaac 175  Q
    ||||||||| ||||| ||| || || |||||||||| ||||||||||||||| |||||||||||| || |||||||    
T  40579662 caagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaac 40579587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 9308970 - 9309065
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc---acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcct 184  Q
    |||||||| |||||||||||||||  |||   ||||| ||||||| | |||| ||||||||   |||||||||||| || ||||||||||||||||    
T  9308970 tgttgtgtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccattgcct 9309065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 25561781 - 25561736
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||    
T  25561781 ccacatcggataaaagagtaaaggttgaacaccttataagtaagag 25561736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 45123002 - 45123059
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacacc 151  Q
    ||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||||||    
T  45123002 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacacc 45123059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 1014401 - 1014337
Alignment:
Q  101 caagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||||||||||  ||  ||||| ||||||||| ||||||||||||||| ||||||||||||    
T  1014401 caagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagag 1014337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 157
Target Start/End: Original strand, 147822 - 147888
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataa 157  Q
    |||||||| ||||||||||||||| || ||||||| ||||||| | |||| |||||||| |||||||    
T  147822 tgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaacaacatataa 147888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 16107671 - 16107783
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| ||  |||||||||||||| | |||||||| |||||| |||||||||||| ||||||||||||||||||||| | |    
T  16107671 tgttgtgtacaagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaaggt 16107770  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  16107771 tttgggtaagagt 16107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 2377747 - 2377859
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||| |||||||||||||||| || ||||||||| ||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||| | |    
T  2377747 tgttgtgcacaagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 2377846  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  2377847 tttgggtaagagt 2377859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 16454568 - 16454680
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||  || ||||||| ||||||| |||||| |||||||||| |||||||||||| || |||||||||||||||||| |||    
T  16454568 tgttgtgtacaagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaagat 16454667  T
Q  191 tttgagtaagagt 203  Q
    ||||  |||||||    
T  16454668 tttggataagagt 16454680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 32460733 - 32460633
Alignment:
Q  104 gtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagag 202  Q
    |||||||||||| || |||||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| | ||||| |||||||    
T  32460733 gtgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagag 32460634  T
Q  203 t 203  Q
    |    
T  32460633 t 32460633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 16108056 - 16108151
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||||||||||||||||||| |||||||||| ||||||| | |||| |||||||||| |||||||||||| || ||||||||||||||||||    
T  16108056 tgttgtgtacaagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaacccattgcctta 16108151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 29518505 - 29518608
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||| ||||| | ||||| ||||    
T  29518505 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaa 29518604  T
Q  200 gagt 203  Q
    ||||    
T  29518605 gagt 29518608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 29518922 - 29519025
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||| ||||| | ||||| ||||    
T  29518922 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaa 29519021  T
Q  200 gagt 203  Q
    ||||    
T  29519022 gagt 29519025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 32741181 - 32741284
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||| ||||| | ||||| ||||    
T  32741181 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaa 32741280  T
Q  200 gagt 203  Q
    ||||    
T  32741281 gagt 32741284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 3409261 - 3409364
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||| ||||||||| ||||||||||||||| |||||||||||| || ||||||| |||||||||| | ||||| ||||    
T  3409261 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaa 3409360  T
Q  200 gagt 203  Q
    ||||    
T  3409361 gagt 3409364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 26544051 - 26544154
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||  |||||||||||| || ||||||||||  |||||| | ||||||||||    
T  26544051 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttgagtaa 26544150  T
Q  200 gagt 203  Q
    ||||    
T  26544151 gagt 26544154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 35210206 - 35210309
Alignment:
Q  101 caagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||||||  || |||||||||||||||| ||||||||||||||| |||||||||||| || |||||| ||||||||||| | ||||| ||||    
T  35210206 caagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgggtaa 35210305  T
Q  200 gagt 203  Q
    ||||    
T  35210306 gagt 35210309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 2378128 - 2378214
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||| |||||    
T  2378128 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattacctta 2378214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 2843547 - 2843660
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaaga-gaactcataaacccattgccttatga 189  Q
    ||||||| |||| ||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||| || | ||||||| |||||||||| |     
T  2843547 tgttgtgcacaattgtgagttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaagg 2843646  T
Q  190 ttttgagtaagagt 203  Q
    ||||| ||||||||    
T  2843647 ttttgggtaagagt 2843660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 3415462 - 3415563
Alignment:
Q  103 agtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaaga 201  Q
    ||||||||||||| || |||||||  |||||||| |||||||||||||||||||||||||||| || |||||||||||||||||| | ||||  ||||||    
T  3415462 agtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaaggtttttggtaaga 3415561  T
Q  202 gt 203  Q
    ||    
T  3415562 gt 3415563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 1127381 - 1127465
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||| ||||||||||||||| ||||| | ||||| ||||||||    
T  1127381 ccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagt 1127465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 2578607 - 2578496
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||| ||||||||| | ||||||||||||||  |||||||||||| || ||||||||||| |||||| | |    
T  2578607 tgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccatagccttaaggt 2578509  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  2578508 tttgggtaagagt 2578496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 10074528 - 10074416
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||| || ||| |||||||||| || | ||||||||||||||| |||||||||||| || ||||||| |||||||||| | |    
T  10074528 tgttgtgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggt 10074429  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  10074428 tttgggtaagagt 10074416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 3058228 - 3058331
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||| ||||||| || ||||||||||||||||| ||||||||||||||| |||||||| ||| |  |||||||||||||||||| | ||||| ||||    
T  3058228 caagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgggtaa 3058327  T
Q  200 gagt 203  Q
    ||||    
T  3058328 gagt 3058331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 14748494 - 14748391
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||| |||||| || ||||||| |||||| ||| | ||||| ||||    
T  14748494 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgggtaa 14748395  T
Q  200 gagt 203  Q
    ||||    
T  14748394 gagt 14748391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 2580037 - 2579927
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||||||||||| | ||||||||||||||  |||||||||||| || ||||||||||  |||||| | |    
T  2580037 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaaggt 2579938  T
Q  191 tttgagtaaga 201  Q
    |||| ||||||    
T  2579937 tttgggtaaga 2579927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 9062512 - 9062419
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    ||||||| || ||||||||||| || ||||||||||||||||| ||||||||||||| | |||||||||||| |||||||||| ||||| ||||    
T  9062512 ttgtgtataaatgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaactcattgtctta 9062419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 16454900 - 16455012
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||| ||||||||||  || ||||||| ||||||| | ||||||||||||||| ||||||||| || || |||||||| ||||||||| | |    
T  16454900 tgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaacctattgccttaaggt 16454999  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  16455000 tttgggtaagagt 16455012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 593865 - 593766
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||| || || ||||||||||||||| | ||||||||||||||| |||||||||||| ||||||||||| | ||||||| | ||||| ||||    
T  593865 caagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttgggtaa 593766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 1846770 - 1846853
Alignment:
Q  120 cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| || |||||| ||||||||||| | |||||  |||||||    
T  1846770 cacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggataagagt 1846853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 3409662 - 3409747
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctt 185  Q
    ||||||||||||||| || ||||||| ||||||||| |||| |||||||| | |||||||||||| || |||||||||||||||||    
T  3409662 caagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggacccataaacccattgcctt 3409747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 10911558 - 10911671
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataa-taaaggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    |||||| | |||||||||||||||  ||| ||||| ||||||| || ||||||||||||||| |||||||||||| |||||||||| ||||||||||       
T  10911558 tgttgtatgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaag 10911657  T
Q  190 ttttgagtaagagt 203  Q
    |||||| |||||||    
T  10911658 ttttgaataagagt 10911671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 1950350 - 1950238
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||| ||| |||||||||||||| || ||||||||||||||| | ||||||||||||||| || ||||||||| |  |||||| | | ||||||| | |    
T  1950350 tgttgcgtataagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggt 1950251  T
Q  191 tttgagtaagagt 203  Q
    |||||||||||||    
T  1950250 tttgagtaagagt 1950238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 10074156 - 10074048
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||| ||||||||||  ||| |||||||||| || | |||| |||||||||| |||||||||||| || |||||||||||||||||| | |    
T  10074156 tgttgtgtgcaagggtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggt 10074057  T
Q  191 tttgagtaa 199  Q
    |||| ||||    
T  10074056 tttgggtaa 10074048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 186
Target Start/End: Complemental strand, 5958738 - 5958673
Alignment:
Q  121 acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    ||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||| ||||| ||||    
T  5958738 acatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaactcattgtctta 5958673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 10073779 - 10073669
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||| ||||||| || |||||||||| ||||   ||||||||||||||| |||||||||||| |  ||||||| ||||| |||| |||    
T  10073779 tgttgtgtgcaagtgttagttatatgtcccacatcggagaaaag--taaaggttgaacaccttataagtaagaggatccataaactcattggcttaagat 10073682  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  10073681 tttgggtaagagt 10073669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 5832191 - 5832108
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaa 174  Q
    ||||||| |||||||| ||||||| || |||||| |||||||| | ||||||||||||||| |||||||||||| || ||||||    
T  5832191 tgttgtgcacaagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 5832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 8481920 - 8482031
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatt 191  Q
    |||||||| |||||||||||||||  |||||||| |||| || | |  |||||||||||  ||||| | |||  |||||||||| |||||||||| ||||    
T  8481920 tgttgtgtgcaagtgtgagttatatgtccacatcagatataaaagtggaggttgaacactttataaatgagatgactcataaactcattgccttaagatt 8482019  T
Q  192 ttgagtaagagt 203  Q
    ||| ||||||||    
T  8482020 ttgggtaagagt 8482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 2579270 - 2579203
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataag 158  Q
    |||||||||||||||| ||||||| || ||||||||||||||| | |||| |||||||||| ||||||    
T  2579270 tgttgtgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacaccttataag 2579203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 6999959 - 6999849
Alignment:
Q  94 ttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    ||||||| ||||||||||||||  ||| ||||||||||||| | |||| |||||||||| |||| ||||||| |  ||||||| || ||||||| | |||    
T  6999959 ttgtgtataagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttt 6999860  T
Q  193 tgagtaagagt 203  Q
    ||  |||||||    
T  6999859 tggataagagt 6999849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 205
Target Start/End: Complemental strand, 2579645 - 2579543
Alignment:
Q  104 gtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagag 202  Q
    |||||||||||| || |||||||||| |||| | ||||||| | | ||| ||||||||||||  | ||||||| |||||||||| | ||||| |||| ||    
T  2579645 gtgtgagttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggcccataaactcattgccttaaggttttgggtaaaag 2579546  T
Q  203 tat 205  Q
    |||    
T  2579545 tat 2579543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 35210499 - 35210544
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    ||||||||||||||||| ||||||||||| ||| | ||||||||||    
T  35210499 ccacatcggataaaatagtaaaggttgaataccttgtaagtaagag 35210544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 17294570 - 17294682
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||  |||||||||||| || |||||||||||||||||| | |    
T  17294570 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggt 17294669  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  17294670 tttgggtaagagt 17294682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 34364918 - 34365030
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||||| | |    
T  34364918 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggt 34365017  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  34365018 tttgggtaagagt 34365030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 44290614 - 44290509
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||| | |||||||||||| || |||||||||||||||||| | ||||| ||||    
T  44290614 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaa 44290515  T
Q  200 gagtat 205  Q
    ||||||    
T  44290514 gagtat 44290509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 3550722 - 3550825
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||   ||||| ||||    
T  3550722 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaagttttgggtaa 3550821  T
Q  200 gagt 203  Q
    ||||    
T  3550822 gagt 3550825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 44290981 - 44290882
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||| | ||||| ||||    
T  44290981 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 44290882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 26661687 - 26661575
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||||| ||||| | ||||||||||||||| ||||||| |||| || ||||||| |||||||||| | |    
T  26661687 tgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggt 26661588  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  26661587 tttgggtaagagt 26661575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 41157368 - 41157480
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||||||| ||||||| | |||| |||||||||| |||||||||||| || |||||||||||||||||  | |    
T  41157368 tgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggacccataaacccattgcctttaggt 41157467  T
Q  191 tttgagtaagagt 203  Q
    |||||||||||||    
T  41157468 tttgagtaagagt 41157480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 29798192 - 29798287
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||| | |||||||||||||||  ||| |||| |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  29798192 tgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgcctta 29798287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 41184590 - 41184495
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| |||||||||||||||  || |||||||||||||||| ||||||||||||||  |||||||||||| || ||||||||||||||||||    
T  41184590 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgcctta 41184495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 11977276 - 11977385
Alignment:
Q  95 tgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatttt 193  Q
    ||||||||||||||||||||| || ||||||||| ||||| | |||| |||||||||| |||||||||||| ||||||||||| | ||||||| | ||||    
T  11977276 tgtgtacaagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcactcataaacctaatgccttaaggtttt 11977375  T
Q  194 gagtaagagt 203  Q
    | ||||||||    
T  11977376 gggtaagagt 11977385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 37556104 - 37556216
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggat-aaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    |||||||||||||||||||||||| || ||||||||||| |||||| ||||||||||||| | |||||||||||| || ||||||||||| |||||| |     
T  37556104 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagaggac-cataaacccatagccttaagg 37556202  T
Q  190 ttttgagtaagagt 203  Q
    ||||| ||||||||    
T  37556203 ttttgggtaagagt 37556216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 31767326 - 31767214
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||| |||||| |||||||||||||||||| | ||||||||||||||| |||||||||||| || ||| |||| | ||||||| | |    
T  31767326 tgttgtgtgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaaggt 31767227  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  31767226 tttgggtaagagt 31767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 34364500 - 34364612
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || |||||||||||||||| ||||||||||||||| |||||||||||| |  | ||||||||| |||||| | |    
T  34364500 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaaggt 34364599  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  34364600 tttgggtaagagt 34364612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 41142365 - 41142460
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||| ||| ||||||||||||||| || ||||||||||||||| | ||||||||||||||| ||||||||| || || ||||||||||||||||||    
T  41142365 tgttctgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgcctta 41142460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 3537303 - 3537226
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaaccc 177  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||    
T  3537303 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccc 3537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 24600479 - 24600367
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || ||| |||||||| || | |||||||||||||   ||||||||||||||||||||||| ||||| |||| | |    
T  24600479 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggt 24600380  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  24600379 tttgtgtaagagt 24600367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 34649431 - 34649543
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| ||||||||||||||||| || ||||||||||||||| | ||||||||||||||| |||||||   ||||| |||||||| | ||||||| | |    
T  34649431 tgttgtatacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacctaatgccttaaggt 34649530  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  34649531 tttgggtaagagt 34649543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 40082400 - 40082511
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||  |||||||||||||||  ||| ||||||||||||||| ||||||||||||||| |||||||||||| | |||||||  |||||||||| | |    
T  40082400 tgttgtgcgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga-tcataaattcattgccttaaggt 40082498  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  40082499 tttgggtaagagt 40082511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 66637 - 66522
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| |||||| |||||||| || | ||||||||||||||| |||||||||||| |  |||||||  || |||||| | |    
T  66637 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaaggt 66538  T
Q  191 tttgagtaagagtata 206  Q
    |||| |||||||||||    
T  66537 tttgggtaagagtata 66522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 3875496 - 3875401
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| |||| || |||||||  || |||||||||||||| | ||||||||| ||||| |||||||||||| |||||||||||||||||||||    
T  3875496 tgttgtgtgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgcctta 3875401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 32594872 - 32594769
Alignment:
Q  101 caagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||||||  ||| ||||| ||||||||| ||||||||||||||| |||||||||||| || ||||||| ||||| |||| | ||||| ||||    
T  32594872 caagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtaa 32594773  T
Q  200 gagt 203  Q
    ||||    
T  32594772 gagt 32594769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 14318875 - 14318972
Alignment:
Q  107 tgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||| ||||||| |||||||||||| ||||||||||||||| |||||||||||  || |||||| | ||||||||| | ||||| ||||||||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagt 14318972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 37850765 - 37850680
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacc 176  Q
    |||||||| ||||||||||||||| || |||||||| |||||| | || |||||||||||| ||||||||||||||| ||||||||    
T  37850765 tgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacc 37850680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 3537736 - 3537652
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||| ||  |||||||||||| |||| | ||||| ||||||||    
T  3537736 ccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgggtaagagt 3537652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 5320130 - 5320018
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| | ||||||||||||||| ||||||||||||||| || | |||| |||||||||| ||||||| |||| || ||||||| ||| |||||| | |    
T  5320130 tgttgtatgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggt 5320031  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  5320030 tttgggtaagagt 5320018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 22077660 - 22077548
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || ||||||||||| || | ||||||||||||||| |||||||||||| || ||||||| | | |||||| | |    
T  22077660 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggt 22077561  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  22077560 tttgggtaagagt 22077548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 26662063 - 26661951
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||||||||||||||||||||  ||| | ||| ||||||| | ||||||||||||||| ||||||| |||  || |||||||| ||||||||| | |    
T  26662063 tgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaaggt 26661964  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  26661963 tttgggtaagagt 26661951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 38804520 - 38804408
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| ||||||||||||||||| || |||||||| |||||| | ||||||||||||||  |||||||||||| |  |||||||||||  ||||| | |    
T  38804520 tgttgtttacaagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggt 38804421  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  38804420 tttgggtaagagt 38804408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 41156984 - 41157096
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||| ||||| || ||| | ||||||||| | ||||||||||||||| |||||||||||| || ||||||| |||||| ||| | |    
T  41156984 tgttgtgtgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaaggt 41157083  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  41157084 tttgggtaagagt 41157096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 41759485 - 41759588
Alignment:
Q  101 caagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||||||  || |||||||||||||||| |||| |||||||||| |||||||||||  |  |||||| ||||||||||| | ||||| ||||    
T  41759485 caagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggtaa 41759584  T
Q  200 gagt 203  Q
    ||||    
T  41759585 gagt 41759588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 50052178 - 50052103
Alignment:
Q  102 aagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacc 176  Q
    |||||||||||||| || ||||||||||||||||| ||||||||||||| | |||||||||||| || ||||||||    
T  50052178 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacc 50052103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 173
Target Start/End: Original strand, 45084378 - 45084457
Alignment:
Q  95 tgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataa 173  Q
    ||||| |||||||||||||||  ||| ||||||||||||| | ||||||||||||||| |||||||||||| || |||||    
T  45084378 tgtgtgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa 45084457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 48588644 - 48588541
Alignment:
Q  101 caagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||| ||  ||| ||||||||||||||| ||||||||||||||| |||||||||||  || | ||||  |||||||||| | ||||| ||||    
T  48588644 caagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggtaa 48588545  T
Q  200 gagt 203  Q
    ||||    
T  48588544 gagt 48588541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 37555723 - 37555796
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    ||||||||| |||||||||||||| || ||||||||||||||||| | ||||||||| ||  ||||||||||||    
T  37555723 tgttgtgtaaaagtgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagag 37555796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 30630803 - 30630691
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||| ||| ||||||||| |||||  || |||||||||||||| | ||||||||  ||||  ||||||||||||||| ||||||| ||||||||||   |    
T  30630803 tgttatgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaagagaacccataaacacattgccttaaagt 30630704  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  30630703 tttgggtaagagt 30630691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 39066365 - 39066293
Alignment:
Q  92 tgttgtgtacaagtgtgagttatag-ttccacatcggataaaataataaaggttgaacaccatataagtaaga 163  Q
    |||||||| |||||||||||||||  |||||||||||||| || | ||||||||||||||| ||||| |||||    
T  39066365 tgttgtgtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaaga 39066293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 9955911 - 9956014
Alignment:
Q  103 agtgtgagttata-gttccacatcggataaaataa-taaaggttgaacaccatataagtaagagaactca-taaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||| || ||||||| ||||||| || ||||||||||||||  |||||||||||| || || |||||| ||||||||| | ||||| ||||    
T  9955911 agtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaa 9956010  T
Q  200 gagt 203  Q
    ||||    
T  9956011 gagt 9956014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 184
Target Start/End: Complemental strand, 22077991 - 22077900
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcct 184  Q
    |||||| ||||||||||||||| |||  | |||||||| || ||||||||||||||| | |||||||||||| || ||||||| ||| ||||    
T  22077991 ttgtgtgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcatagcct 22077900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 44043896 - 44043825
Alignment:
Q  132 aataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||| |||| |||||||||| |||||||||||  || ||||||||||||| |||| ||||||| ||||||||    
T  44043896 aatagtaaatgttgaacaccttataagtaagatgacccataaacccattgtcttaagattttgggtaagagt 44043825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 45494115 - 45494044
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatata----agtaagagaactcataaacccattgcctta 186  Q
    ||||||||||||||||| ||||||||||||||||||||    |||||||  |  ||||||||||||||||||    
T  45494115 ccacatcggataaaatagtaaaggttgaacaccatatatataagtaagatgatccataaacccattgcctta 45494044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 66224 - 66140
Alignment:
Q  120 cacatcggataaaataataaaggtt-gaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||| || | |||||||| ||||||| |||||||||||| || |||||||| || |||||| | ||||| ||||||||    
T  66224 cacatcggatagaaaagtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaaggttttgggtaagagt 66140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 4878796 - 4878872
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaac 167  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||| | ||| |||||||   ||||||| |||||||    
T  4878796 tgttgtgtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagagaac 4878872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 5528890 - 5528830
Alignment:
Q  120 cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccatt 180  Q
    |||||||||||||| | ||||||||||||| | ||||| |||||| |||||||||| ||||    
T  5528890 cacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaactcatt 5528830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 21378206 - 21378118
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    |||||||| ||||||| ||||||| || ||| |||||||| || | ||||||||||| | | |||||||||||| || |||||||||||    
T  21378206 tgttgtgtgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaacccat 21378118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 44685449 - 44685545
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaagg-ttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| ||||||||||||||| || ||| |||||||| || | |||||| ||||| ||| |||||||||||| ||  |||||| ||||||||||    
T  44685449 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgcctta 44685545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 10351182 - 10351265
Alignment:
Q  120 cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||| |||| || |||| |||||||||||  ||||||| ||||||| ||||||| |||| | ||| ||||||| ||||||||    
T  10351182 cacatcagatagaaaaatagaggttgaacactttataagtgagagaacccataaacacattactttaagattttgggtaagagt 10351265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 22793271 - 22793384
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccatt-gccttatga 189  Q
    |||||||  ||||||||||||||| || |||||||| ||| || | || |||||||| ||  ||||||| |||| |  |||||||||||| |||||| |     
T  22793271 tgttgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccatttgccttacgg 22793370  T
Q  190 ttttgagtaagagt 203  Q
    ||||||||||||||    
T  22793371 ttttgagtaagagt 22793384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 22077243 - 22077183
Alignment:
Q  123 atcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcc 183  Q
    |||||||| || | ||||||||||| ||| |||||||||||| || ||||||| |||||||    
T  22077243 atcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaactcattgcc 22077183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 45839620 - 45839675
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaa 147  Q
    |||||||||||||| ||||||||| || |||||||||||| || |||||||||||||    
T  45839620 tgttgtgtacaagtatgagttatatgtcccacatcggatagaa-aataaaggttgaa 45839675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 205
Target Start/End: Complemental strand, 1271 - 1157
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || |||||| |||||||| | ||||||||||||||| |||||| || || ||||||||||||||||||||| | |    
T  1271 tgttgtgtacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaaggt 1172  T
Q  191 tttgagtaagagtat 205  Q
    |||| ||||||||||    
T  1171 tttgggtaagagtat 1157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 3150 - 3092
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaaca 149  Q
    |||||||| || |||||||||||| || ||||||||||||||| | |||||||||||||    
T  3150 tgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 3092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 5770 - 5870
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || |||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||| |||    
T  5770 tgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagat 5869  T
Q  191 t 191  Q
    |    
T  5870 t 5870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 5389 - 5462
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||| |||||||||||||||  ||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  5389 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagag 5462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 679 - 567
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    ||||||| |||||||||||||||| || ||||||||| ||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||| | |    
T  679 tgttgtgcacaagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggt 580  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  579 tttgggtaagagt 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 298 - 234
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  298 caagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagag 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 2e-26; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 4955480 - 4955368
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || || ||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||||||||||| | |    
T  4955480 tgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggt 4955381  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  4955380 tttgggtaagagt 4955368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 34646812 - 34646700
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||||||||||| | |||| |||||||||| ||||| |||||| |||||||||| |||||||||| | |    
T  34646812 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaaggt 34646713  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  34646712 tttgggtaagagt 34646700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 41707627 - 41707516
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || ||||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||| ||||| |||| | |    
T  41707627 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaactcattgtcttaaggt 41707528  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  41707527 tttg-gtaagagt 41707516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 52884880 - 52884975
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||||||||||||    
T  52884880 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgcctta 52884975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 54108908 - 54109017
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatt 191  Q
    |||||||| ||||||| |||||| || ||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||| | ||    
T  54108908 tgttgtgtgcaagtgtcagttat-gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag-tt 54109005  T
Q  192 ttgagtaagagt 203  Q
    ||| ||||||||    
T  54109006 ttgggtaagagt 54109017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 54936193 - 54936301
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgatt 191  Q
    |||||||||||||||||||||||    ||||||| ||||||||| ||||||||||||||| | |||||||||| || |||||||||||||||||| | ||    
T  54936193 tgttgtgtacaagtgtgagttatc---ccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggtt 54936289  T
Q  192 ttgagtaagagt 203  Q
    ||| ||||||||    
T  54936290 ttgggtaagagt 54936301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 25483329 - 25483441
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  || |||||||||||||||| ||||||||||||| | |||||||||||| |  |||||||||||||||||| | |    
T  25483329 tgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggt 25483428  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  25483429 tttgggtaagagt 25483441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 45489494 - 45489409
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacc 176  Q
    |||||||||||||||||| |||||  || |||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||    
T  45489494 tgttgtgtacaagtgtgaattatatgtctcacatcggataaaagagtaaaggttgaacaccatataagtaagagaactcttaaacc 45489409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 20825829 - 20825941
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||||| ||||| |||||| || ||||||||  | |||||| | |    
T  20825829 tgttgtgtacaaatgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaacctttagccttaaggt 20825928  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  20825929 tttgggtaagagt 20825941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 44620362 - 44620458
Alignment:
Q  108 gagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||||| |||||||||||||||||| | ||||||||||||||| ||||| ||||||| | |||||||||||||||||| | ||||| ||||||||    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagt 44620458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 52884687 - 52884783
Alignment:
Q  91 ctgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||| ||||||||||||||| |||||||||||  |   |||||||||||||||||    
T  52884687 ctgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgcctta 52884783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 50630909 - 50630806
Alignment:
Q  101 caagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||| ||||||||||  ||| ||||||||||||||| ||||||||||||||  |||||||||||| || |||||||||||||||||| | ||||| ||||    
T  50630909 caagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaaggttttgggtaa 50630810  T
Q  200 gagt 203  Q
    ||||    
T  50630809 gagt 50630806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 55933278 - 55933175
Alignment:
Q  101 caagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||||||  ||| ||||||||||||||| ||| ||||||||||| |||||||||||| || ||||||||||||||||||   ||||| ||||    
T  55933278 caagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaagttttgggtaa 55933179  T
Q  200 gagt 203  Q
    ||||    
T  55933178 gagt 55933175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 201
Target Start/End: Complemental strand, 22028124 - 22028014
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||| ||||| || |||||||||||||||||  |||||||||||||| |||||||||||| || |||||||  ||||||||| | |    
T  22028124 tgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggacccataaacatattgccttaaggt 22028025  T
Q  191 tttgagtaaga 201  Q
    |||| ||||||    
T  22028024 tttgggtaaga 22028014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 205
Target Start/End: Original strand, 36572012 - 36572126
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||||||||||||||||||| || |||||||| |||||| | |||| |||||||||| |||||||||||  || |||||| ||||||||||| | |    
T  36572012 tgttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaaggt 36572111  T
Q  191 tttgagtaagagtat 205  Q
    |||| || |||||||    
T  36572112 tttgggttagagtat 36572126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 49880162 - 49880264
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || |||||| | |||||||| ||||||||||||||| |||||||||||| || |||||||||| ||||||| | ||||| ||||    
T  49880162 caagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgggtaa 49880261  T
Q  200 gag 202  Q
    |||    
T  49880262 gag 49880264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 10245913 - 10246024
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| |  ||||||||||||||| | ||||||||||||||| |||||||||||| || ||||||||||  |||||| | |    
T  10245913 tgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagaggac-cataaacccaaagccttaaggt 10246011  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  10246012 tttgggtaagagt 10246024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 20826210 - 20826322
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||| |||| || ||||||||||| || ||||||||||||||||| |||| |||||||||  ||||||||||||||| ||||||||||| ||||||  ||    
T  20826210 tgttatgtagaaatgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaacccataaacccatagccttaacat 20826309  T
Q  191 tttgagtaagagt 203  Q
    |||  ||||||||    
T  20826310 tttaggtaagagt 20826322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 36629230 - 36629342
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || |||||||||||| || | |||| ||| |||||| |||||||||||| || ||||||| |||||||||| | |    
T  36629230 tgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggt 36629329  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  36629330 tttgggtaagagt 36629342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 54017754 - 54017646
Alignment:
Q  96 gtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttg 194  Q
    |||| ||||||||||||||| || |||| || ||||||||| ||||||||||||| | |||||||||||| || |||||||||||||||||| | ||||     
T  54017754 gtgtgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttta 54017655  T
Q  195 agtaagagt 203  Q
     ||||||||    
T  54017654 ggtaagagt 54017646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Original strand, 39404391 - 39404486
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||||||||||||||||||| || ||||||| ||||||| | ||||||| ||||||| |||||||||||| || |||||||| || ||||||    
T  39404391 tgttgtgtacaagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaacctatagcctta 39404486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 41370359 - 41370462
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || ||| ||||||||||||| |||| |||||| ||| |||||||||||| || ||||||||||||||||||   ||||| ||||    
T  41370359 caagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaagttttgggtaa 41370458  T
Q  200 gagt 203  Q
    ||||    
T  41370459 gagt 41370462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 49076611 - 49076516
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| ||||||||||||||| || ||| ||||||||||| | ||||||||||||||| |||||||||||| ||  |||||||||||| ||||    
T  49076611 tgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggacctataaacccattgtctta 49076516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 50459724 - 50459803
Alignment:
Q  102 aagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccatt 180  Q
    |||||||||||||| |||||||||||| ||||| | ||||||||||||| | |||||||||||| |||||||||||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaacccatt 50459803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 1731810 - 1731698
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||| ||||||||||| || ||||||| ||||||| | ||||||||||||| | ||||| |||||| || |||||||| ||||||||| | |    
T  1731810 tgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaaggt 1731711  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  1731710 tttgggtaagagt 1731698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 2740693 - 2740805
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || |||||||||||| || | ||||||||||||||| |||||||||||| ||  |||||||||  |||||| | |    
T  2740693 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggt 2740792  T
Q  191 tttgagtaagagt 203  Q
    |||  ||||||||    
T  2740793 tttacgtaagagt 2740805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 2741064 - 2741176
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||| ||| ||||||||||||||| || ||||||| |||| |||| ||||||||||| ||| |||||||||||| || |||||  ||||||||||| | |    
T  2741064 tgttatgtgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggt 2741163  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  2741164 tttgggtaagagt 2741176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 16888970 - 16888867
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    ||||||||||||||| || |||||||||||| || | ||||||||||| ||| |||||||||||||||  |||||| ||||| |||| | ||||| ||||    
T  16888970 caagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacggttttgggtaa 16888871  T
Q  200 gagt 203  Q
    ||||    
T  16888870 gagt 16888867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 49076992 - 49076906
Alignment:
Q  93 gttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccat 179  Q
    ||||||| ||||||||||||||| |||||| || || ||||||| ||||||||||||||| ||| ||||||||||| |||||||||||    
T  49076992 gttgtgtgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttat-agtaagagaacccataaacccat 49076906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 3340802 - 3340912
Alignment:
Q  94 ttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    |||||| ||||||||||||||| || || |||| ||| ||| | |||||||||| |||| |||||||||||| || |||||||||| ||||||| | |||    
T  3340802 ttgtgtgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaaggttt 3340901  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  3340902 tgggtaagagt 3340912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 203
Target Start/End: Complemental strand, 18932882 - 18932800
Alignment:
Q  121 acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||| ||||||||||| ||| ||||| |||||| || |||||||||||||||||| | ||||  ||||||||    
T  18932882 acatcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagt 18932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 39404013 - 39404123
Alignment:
Q  94 ttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattt 192  Q
    ||||||||||||||||||||||  ||| |||| | |||||| | ||||||||||||||  |||||||||||| |||||||||| ||| || ||| | |||    
T  39404013 ttgtgtacaagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttt 39404112  T
Q  193 tgagtaagagt 203  Q
    || ||||||||    
T  39404113 tgggtaagagt 39404123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 44620289 - 44620363
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagaga 165  Q
    |||||||||||| | ||||||||| || |||||| |||||||||| ||||||||||||||| |||||||||||||    
T  44620289 tgttgtgtacaaatatgagttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagaga 44620363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 203
Target Start/End: Complemental strand, 39793024 - 39792911
Alignment:
Q  91 ctgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatga 189  Q
    ||||||||||||||||||||||||| || ||||||| |||| || | |||| |||||||||| |||||| ||||| |  | ||||| |||||||||| |     
T  39793024 ctgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaagg 39792925  T
Q  190 ttttgagtaagagt 203  Q
    ||||| ||||||||    
T  39792924 ttttgggtaagagt 39792911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 22183427 - 22183315
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  ||| ||||||||||||| | |||| ||||||||   ||||||||| || || |||||||||||||||||| | |    
T  22183427 tgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaaggt 22183328  T
Q  191 tttgagtaagagt 203  Q
    ||||  |||||||    
T  22183327 tttggataagagt 22183315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 36608824 - 36608712
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcca-catcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| |||||||||||||||  |||| |||||||||||| | |||| ||||||||||  ||||||||||| |  |||||| |||||| |||| | |    
T  36608824 tgttgtgtgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaaggt 36608725  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  36608724 tttgggtaagagt 36608712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 39599505 - 39599461
Alignment:
Q  21 tttggtggaagatagcgcagaagaaggcaaccataaaaatttgag 65  Q
    ||||||||||||||| |||||||||||||||||||||||||||||    
T  39599505 tttggtggaagatagtgcagaagaaggcaaccataaaaatttgag 39599461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 176
Target Start/End: Original strand, 44620654 - 44620738
Alignment:
Q  93 gttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacc 176  Q
    ||||||| ||||||||||||||| || ||||||||||| ||||| || |||||||||||  |||||||||||| || ||||||||    
T  44620654 gttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggacccataaacc 44620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 44621023 - 44621107
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||  | ||||||| ||||| |||| | ||||| ||||||||    
T  44621023 ccacatcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagt 44621107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 45496826 - 45496910
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||||  ||||||||||||||| |||||||||||| ||  |||||| ||||| |||| | ||||| ||||||||    
T  45496826 ccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagt 45496910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 50002419 - 50002531
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| | |||||||||||||||  || |||||||||||||| | ||||||||||||||  | |||||||||| || |||||| |||||| |||| | |    
T  50002419 tgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaaggt 50002518  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  50002519 tttgggtaagagt 50002531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 3244614 - 3244519
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| |||||||||||||||  || ||||||||||| || | ||||||||||||| | |||||||||||| || ||||||| ||||| ||||    
T  3244614 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgtctta 3244519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 203
Target Start/End: Complemental strand, 6975590 - 6975507
Alignment:
Q  120 cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    |||||| ||||||||| ||||||||||| | | |||||||||||| ||||||||| |||||  |||| ||||||| ||||||||    
T  6975590 cacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaatccattatcttaagattttgggtaagagt 6975507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 203
Target Start/End: Original strand, 49302907 - 49303011
Alignment:
Q  102 aagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataa--gtaagagaactcataaacccattgccttatgattttgagta 198  Q
    |||||||||||||| || |||||||  |||||| | ||||||||||||| | |||||  ||||||| || |||||||||||||||||| | ||||| |||    
T  49302907 aagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttttgggta 49303006  T
Q  199 agagt 203  Q
    |||||    
T  49303007 agagt 49303011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 54343136 - 54343091
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  54343136 ccacatcggataaaatagtaaaggttgaacaccttataagtaagag 54343091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Original strand, 3341121 - 3341233
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||||||||||||||| || |||||| |||||||| | |||||||| |||||  |||||||||||| || |||||   |||||  ||| |||    
T  3341121 tgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggacccataacatcattgttttaagat 3341220  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  3341221 tttgggtaagagt 3341233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 171
Target Start/End: Original strand, 3700358 - 3700438
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcat 171  Q
    |||||||| |||||||||||||||  ||| ||||||||||||| | |||| |||||||||| ||||||||| || ||||||    
T  3700358 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagtaaaaggactcat 3700438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 32941286 - 32941174
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||| | |||||||||||||||  ||  |||||||| | || | ||||||||||||||| ||||| ||||||  ||||||||| |||||||||| | |    
T  32941286 tgttgtctgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggt 32941187  T
Q  191 tttgagtaagagt 203  Q
    |||| ||||||||    
T  32941186 tttgggtaagagt 32941174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 54017837 - 54017753
Alignment:
Q  119 ccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||| | ||||||||||||||| |||||||||||| || ||||  ||||||| |||| | ||||  ||||||||    
T  54017837 ccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccatattcccattgtcttaaggttttaggtaagagt 54017753  T

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Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 54741342 - 54741268
Alignment:
Q  91 ctgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    ||||||||| ||||||||| |||||  || ||||||||||| || | ||||||||||||||| ||||||||||||    
T  54741342 ctgttgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagag 54741268  T

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Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 164
Target Start/End: Complemental strand, 4390264 - 4390191
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataataaaggttgaacaccatataagtaagag 164  Q
    |||||||| ||||||||||||| |  ||| ||||| ||||||| | ||||||||||||||| ||||||||||||    
T  4390264 tgttgtgtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagag 4390191  T

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Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 205
Target Start/End: Complemental strand, 16889690 - 16889585
Alignment:
Q  101 caagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttgagtaa 199  Q
    |||||||||||||||  || || |||||||| || | ||||||||||| ||| |||||||||||| | ||||||||| | |||||||   ||||| ||||    
T  16889690 caagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggtaa 16889591  T
Q  200 gagtat 205  Q
    ||||||    
T  16889590 gagtat 16889585  T

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Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 165
Target Start/End: Original strand, 44621420 - 44621493
Alignment:
Q  93 gttgtgtacaagtgtgagttatagttcca-catcggataaaataataaaggttgaacaccatataagtaagaga 165  Q
    ||||||| |||||||||||||||  |||| ||| |||||||| | |||||||| |||||| |||||||||||||    
T  44621420 gttgtgtgcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacaccttataagtaagaga 44621493  T

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Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 54108540 - 54108612
Alignment:
Q  101 caagtgtgagttatagttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaa 174  Q
    |||||||||||||| || ||| || |||||||||| ||||||||||||||| ||||||||| || || ||||||    
T  54108540 caagtgtgagttat-gtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaa 54108612  T

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Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 186
Target Start/End: Original strand, 10246339 - 10246435
Alignment:
Q  91 ctgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    ||||||||| |||||||  ||||||  || || ||||||||||| | ||||||||||||| | ||||||| |||| || ||||||||||| ||||||    
T  10246339 ctgttgtgtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagcctta 10246435  T

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Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 44620937 - 44621012
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc--acatcggataaaataataaaggttgaacaccatataagtaagaga 165  Q
    ||||||| |||||||||||||| |  |||  |||||||||||||   ||||||||||||||| |||||||||||||    
T  44620937 tgttgtggacaagtgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacaccttataagtaagaga 44621012  T

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Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 19504698 - 19504757
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacac 150  Q
    |||||||||||||| ||||||||| || ||| ||||||||||||| |||| |||||||||    
T  19504698 tgttgtgtacaagtatgagttatatgtcccatatcggataaaatagtaaaagttgaacac 19504757  T

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Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 203
Target Start/End: Complemental strand, 22028534 - 22028420
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttcc-acatcggataaaataa--taaaggttgaacaccatataagtaagagaactcataaacccattgccttatg 188  Q
    |||||||| ||||||| | |||||  ||| ||||||||||||| ||  ||||||||||||||| ||| |||||||| || ||||||| ||||| ||||      
T  22028534 tgttgtgtgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaactcattgtcttaat 22028435  T
Q  189 attttgagtaagagt 203  Q
     ||||| ||||||||    
T  22028434 gttttgggtaagagt 22028420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 3271842 - 3271892
Alignment:
Q  153 tataagtaagagaactcataaacccattgccttatgattttgagtaagagt 203  Q
    ||||||||||||||| |||||||| ||||||||| | ||||| ||||||||    
T  3271842 tataagtaagagaacccataaacctattgccttaaggttttgggtaagagt 3271892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 50788137 - 50788087
Alignment:
Q  101 caagtgtgagttata-gttccacatcggataaaataataaaggttgaacac 150  Q
    ||||||| ||||||| || ||||||||||||||||| ||||||||||||||    
T  50788137 caagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaacac 50788087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 48111835 - 48111766
Alignment:
Q  117 ttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||| |||||||||| | ||||||||||||||  ||||||||| || ||| ||||| ||||| |||||    
T  48111835 ttccacctcggataaaagagtaaaggttgaacacattataagtaaaaggacttataaatccattacctta 48111766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 92 - 204
Target Start/End: Complemental strand, 51768223 - 51768110
Alignment:
Q  92 tgttgtgtacaagtgtgagttata-gttccacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgat 190  Q
    |||||||| ||| ||||||||||| || | | |||| ||| || | |||| |||||||||| ||||| |||||| |||||||||| ||||| |||| | |    
T  51768223 tgttgtgtgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaactcattgtcttaaggt 51768124  T
Q  191 tttgagtaagagta 204  Q
    |||| |||| ||||    
T  51768123 tttgggtaaaagta 51768110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 180
Target Start/End: Complemental strand, 34004749 - 34004658
Alignment:
Q  89 cactgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccatt 180  Q
    |||| |||||| |||||||||||||||  || |||||  ||||||| | ||||||||||||| | |||||||||||| || ||||||| ||||    
T  34004749 cactattgtgtgcaagtgtgagttatatgtcacacatatgataaaa-actaaaggttgaacaacttataagtaagaggacccataaactcatt 34004658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 199
Target Start/End: Original strand, 40067041 - 40067145
Alignment:
Q  97 tgtacaagtgtgagttata-gttccacatcggataaaa-taataaaggttgaacaccatataagtaagagaactcataaacccattgccttatgattttg 194  Q
    ||||||||||||||||||| |||| ||||||||||||| |   ||| |||||||||  |||||||||||| || |||| | ||| | ||||| |||||||    
T  40067041 tgtacaagtgtgagttatatgttctacatcggataaaagtgtaaaaagttgaacacattataagtaagaggacacatagatccactaccttaagattttg 40067140  T
Q  195 agtaa 199  Q
     ||||    
T  40067141 ggtaa 40067145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 186
Target Start/End: Complemental strand, 17621 - 17526
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||||| |||||||||||||||  || |||||| ||||||||| ||||||||||||||| | |||||||||| || ||||||||||| ||||||    
T  17621 tgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccatagcctta 17526  T

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Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Original strand, 47382 - 47448
Alignment:
Q  120 cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaacccattgcctta 186  Q
    |||||| ||||||||| ||||| ||||||||| ||||||||||||||  ||||||||||||||||||    
T  47382 cacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccattgcctta 47448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 10276 - 10192
Alignment:
Q  92 tgttgtgtacaagtgtgagttatagttc-cacatcggataaaataataaaggttgaacaccatataagtaagagaactcataaac 175  Q
    ||||||| ||||||||||||||||  || |||||||||||||||  |||| |||||||||| |||||||||||| || |||||||    
T  10276 tgttgtgcacaagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataaac 10192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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