View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9060_low_9 (Length: 559)

Name: NF9060_low_9
Description: NF9060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9060_low_9
NF9060_low_9
[»] chr6 (23 HSPs)
chr6 (47-245)||(9390488-9390687)
chr6 (47-414)||(9390036-9390403)
chr6 (441-546)||(9389901-9390009)
chr6 (168-279)||(9391164-9391275)
chr6 (1-47)||(14196614-14196660)
chr6 (1-50)||(25485949-25485998)
chr6 (1-45)||(14196967-14197011)
chr6 (1-48)||(32593488-32593535)
chr6 (1-51)||(10781142-10781192)
chr6 (1-46)||(6517503-6517548)
chr6 (1-50)||(21836411-21836460)
chr6 (1-50)||(22502770-22502819)
chr6 (1-45)||(7905244-7905288)
chr6 (1-48)||(7160802-7160849)
chr6 (1-47)||(22503155-22503201)
chr6 (1-43)||(31407259-31407301)
chr6 (1-50)||(7161185-7161234)
chr6 (1-50)||(15913929-15913978)
chr6 (1-46)||(31406878-31406923)
chr6 (1-47)||(362869-362915)
chr6 (1-43)||(21836035-21836077)
chr6 (1-46)||(363182-363227)
chr6 (1-50)||(28000381-28000430)
[»] chr3 (34 HSPs)
chr3 (47-117)||(18746485-18746556)
chr3 (1-50)||(36314294-36314343)
chr3 (1-56)||(48322729-48322784)
chr3 (1-50)||(10770486-10770535)
chr3 (165-255)||(18745878-18745968)
chr3 (1-46)||(36314650-36314695)
chr3 (1-48)||(10770843-10770890)
chr3 (1-48)||(48322375-48322422)
chr3 (1-51)||(13949076-13949126)
chr3 (1-47)||(32306423-32306469)
chr3 (1-47)||(37778654-37778700)
chr3 (1-47)||(40788801-40788847)
chr3 (1-50)||(3469581-3469630)
chr3 (1-46)||(10294567-10294612)
chr3 (1-50)||(13948776-13948825)
chr3 (1-46)||(42855688-42855733)
chr3 (1-49)||(52032135-52032183)
chr3 (1-48)||(33156377-33156424)
chr3 (1-44)||(33506180-33506223)
chr3 (1-47)||(3469199-3469245)
chr3 (1-51)||(8041611-8041661)
chr3 (165-279)||(18746611-18746725)
chr3 (1-47)||(29118919-29118965)
chr3 (1-43)||(32306805-32306847)
chr3 (1-47)||(52032520-52032566)
chr3 (1-50)||(11910695-11910744)
chr3 (1-50)||(41421968-41422017)
chr3 (1-44)||(29118529-29118572)
chr3 (1-44)||(29685943-29685986)
chr3 (1-44)||(29686321-29686364)
chr3 (1-43)||(3596112-3596154)
chr3 (1-47)||(33506331-33506377)
chr3 (1-47)||(47551492-47551538)
chr3 (1-50)||(54466419-54466468)
[»] chr8 (32 HSPs)
chr8 (1-50)||(23507808-23507857)
chr8 (1-48)||(11675046-11675093)
chr8 (1-48)||(23505050-23505097)
chr8 (1-51)||(11674690-11674740)
chr8 (1-43)||(36325586-36325628)
chr8 (1-50)||(6471686-6471735)
chr8 (1-46)||(6472396-6472441)
chr8 (1-46)||(15229931-15229976)
chr8 (1-48)||(234121-234168)
chr8 (1-48)||(710532-710579)
chr8 (1-48)||(747744-747791)
chr8 (1-48)||(871639-871686)
chr8 (1-48)||(7983426-7983473)
chr8 (1-44)||(8998070-8998113)
chr8 (1-48)||(35634480-35634527)
chr8 (1-44)||(44664889-44664932)
chr8 (1-43)||(8997859-8997901)
chr8 (1-47)||(15230312-15230358)
chr8 (1-47)||(36325233-36325279)
chr8 (1-50)||(38845651-38845700)
chr8 (1-46)||(44664508-44664553)
chr8 (1-48)||(10445716-10445763)
chr8 (1-47)||(2266491-2266537)
chr8 (1-47)||(2266844-2266890)
chr8 (1-43)||(37542227-37542269)
chr8 (1-47)||(40775649-40775695)
chr8 (1-47)||(41353954-41354000)
chr8 (1-43)||(42945495-42945537)
chr8 (1-50)||(3041808-3041857)
chr8 (1-46)||(25124944-25124989)
chr8 (1-46)||(44407209-44407254)
chr8 (1-49)||(44406854-44406902)
[»] chr7 (26 HSPs)
chr7 (1-49)||(32680592-32680640)
chr7 (1-48)||(32680947-32680994)
chr7 (1-51)||(43266647-43266697)
chr7 (1-50)||(43266262-43266311)
chr7 (1-47)||(32934729-32934775)
chr7 (1-46)||(25453128-25453173)
chr7 (1-46)||(42617911-42617956)
chr7 (1-52)||(23058810-23058861)
chr7 (1-48)||(42618292-42618339)
chr7 (1-43)||(46204424-46204466)
chr7 (1-46)||(10600026-10600071)
chr7 (1-46)||(22081560-22081605)
chr7 (1-46)||(32068477-32068522)
chr7 (1-50)||(33828355-33828404)
chr7 (1-53)||(10600330-10600382)
chr7 (1-48)||(34929002-34929049)
chr7 (1-48)||(39686886-39686933)
chr7 (1-43)||(25628481-25628523)
chr7 (1-47)||(27138322-27138368)
chr7 (1-43)||(28890582-28890624)
chr7 (1-47)||(30948512-30948558)
chr7 (1-43)||(32068099-32068141)
chr7 (1-47)||(34928649-34928695)
chr7 (1-46)||(22081940-22081985)
chr7 (1-46)||(23058429-23058474)
chr7 (1-37)||(18087721-18087757)
[»] chr1 (28 HSPs)
chr1 (1-48)||(24905165-24905212)
chr1 (1-47)||(28011720-28011766)
chr1 (1-58)||(40714432-40714489)
chr1 (1-50)||(49955728-49955777)
chr1 (1-48)||(37929416-37929463)
chr1 (1-48)||(40714824-40714871)
chr1 (1-48)||(45750223-45750270)
chr1 (1-47)||(8898516-8898562)
chr1 (1-47)||(25885374-25885420)
chr1 (52-113)||(26602798-26602860)
chr1 (1-46)||(17188954-17188999)
chr1 (1-46)||(30326496-30326541)
chr1 (1-50)||(31050946-31050995)
chr1 (1-49)||(28325184-28325232)
chr1 (1-47)||(8898898-8898944)
chr1 (1-47)||(20760886-20760932)
chr1 (1-47)||(45749841-45749887)
chr1 (1-46)||(17189232-17189277)
chr1 (1-46)||(49955347-49955392)
chr1 (2-50)||(25884697-25884745)
chr1 (1-49)||(32558488-32558536)
chr1 (1-44)||(44523519-44523562)
chr1 (1-47)||(7371550-7371596)
chr1 (1-47)||(31058438-31058484)
chr1 (2-47)||(28324804-28324849)
chr1 (1-46)||(33442594-33442639)
chr1 (1-46)||(52134420-52134465)
chr1 (1-49)||(52134065-52134113)
[»] scaffold0205 (2 HSPs)
scaffold0205 (1-47)||(21008-21054)
scaffold0205 (1-46)||(21321-21366)
[»] chr4 (36 HSPs)
chr4 (1-47)||(22567138-22567184)
chr4 (1-46)||(4983078-4983123)
chr4 (1-46)||(9400519-9400564)
chr4 (1-47)||(3032581-3032627)
chr4 (1-47)||(27069291-27069337)
chr4 (1-47)||(27934531-27934577)
chr4 (1-47)||(52573609-52573655)
chr4 (1-47)||(54858559-54858605)
chr4 (1-47)||(54858941-54858987)
chr4 (1-46)||(4982726-4982771)
chr4 (2-47)||(27149377-27149422)
chr4 (1-38)||(27934870-27934907)
chr4 (1-50)||(52573224-52573273)
chr4 (1-44)||(9400871-9400914)
chr4 (1-48)||(16605600-16605647)
chr4 (1-48)||(39701290-39701337)
chr4 (1-44)||(45463075-45463118)
chr4 (1-48)||(50504206-50504253)
chr4 (1-43)||(11523952-11523994)
chr4 (1-51)||(34837426-34837476)
chr4 (1-46)||(10407889-10407934)
chr4 (1-46)||(10408270-10408315)
chr4 (1-50)||(27068906-27068955)
chr4 (1-49)||(42738028-42738076)
chr4 (1-49)||(51859787-51859835)
chr4 (1-52)||(32950494-32950545)
chr4 (1-48)||(51203607-51203654)
chr4 (1-47)||(9145118-9145164)
chr4 (1-47)||(22987232-22987278)
chr4 (1-47)||(32950141-32950187)
chr4 (1-43)||(33247625-33247667)
chr4 (1-47)||(34837073-34837119)
chr4 (1-47)||(42738383-42738429)
chr4 (1-43)||(45463454-45463496)
chr4 (1-47)||(50503824-50503870)
chr4 (1-46)||(38012522-38012567)
[»] chr2 (18 HSPs)
chr2 (1-48)||(14900494-14900541)
chr2 (1-47)||(8710849-8710895)
chr2 (1-47)||(14900833-14900879)
chr2 (1-46)||(28226125-28226170)
chr2 (1-55)||(13995664-13995718)
chr2 (1-47)||(15604338-15604384)
chr2 (1-45)||(11830365-11830409)
chr2 (1-48)||(6573045-6573092)
chr2 (1-48)||(8342185-8342232)
chr2 (1-48)||(13996025-13996072)
chr2 (1-47)||(1695739-1695785)
chr2 (1-43)||(8342560-8342602)
chr2 (1-43)||(15604720-15604762)
chr2 (1-47)||(33062049-33062095)
chr2 (1-47)||(33062402-33062448)
chr2 (1-47)||(33739702-33739748)
chr2 (1-47)||(41587234-41587280)
chr2 (1-45)||(41588439-41588483)
[»] chr5 (17 HSPs)
chr5 (1-47)||(6758217-6758263)
chr5 (1-48)||(17544429-17544476)
chr5 (1-43)||(41930868-41930910)
chr5 (1-48)||(20153296-20153343)
chr5 (1-35)||(6757876-6757910)
chr5 (1-47)||(33871719-33871765)
chr5 (1-47)||(41930515-41930561)
chr5 (1-46)||(8875449-8875494)
chr5 (1-49)||(297011-297059)
chr5 (1-49)||(1505964-1506012)
chr5 (1-40)||(8875648-8875687)
chr5 (1-47)||(3656799-3656845)
chr5 (1-47)||(31482754-31482800)
chr5 (202-279)||(204441-204518)
chr5 (1-46)||(20152781-20152826)
chr5 (1-46)||(31482402-31482447)
chr5 (1-46)||(33871339-33871384)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-50)||(222170-222219)
scaffold0006 (1-43)||(221794-221836)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-52)||(12620-12671)
[»] scaffold0771 (2 HSPs)
scaffold0771 (1-51)||(1216-1266)
scaffold0771 (1-50)||(916-965)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-48)||(11521-11568)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-50)||(2389-2438)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-48)||(141946-141993)


Alignment Details
Target: chr6 (Bit Score: 116; Significance: 9e-59; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 47 - 245
Target Start/End: Complemental strand, 9390687 - 9390488
Alignment:
Q  47 taaataatataatgatttgcttccataagtacaat-gcaagcaactgagattttacaaacgcacacaccaaccttgtacgcaaacaacgcttcatgattt 145  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||    
T  9390687 taaataatataatgatttgcttccataagtacaattgcaaggaactgagattttacagacgcacacaccaacattgtacgcaaacaacgctttatgattt 9390588  T
Q  146 catcggcaattgttgaaataatttcggtagttaactgctgccgattctttacttatgcagttaactaccgatgaggtatttaggtaaattactaatgttt 245  Q
    |||||||| ||||||||  |||||||||||||||||   |||| || ||||||| ||||||||||| |||| | || |||| |||||||||||| |||||    
T  9390587 catcggcagttgttgaagcaatttcggtagttaactatcgccggttttttacttctgcagttaactgccgagggggcatttgggtaaattactagtgttt 9390488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 47 - 414
Target Start/End: Complemental strand, 9390403 - 9390036
Alignment:
Q  47 taaataatataatgatttgcttccataagtacaat-gcaagcaactgagattttacaaacgcacacaccaaccttgtacgcaaacaacgcttcatgattt 145  Q
    ||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||| || ||||||||||| |             |||||||||||||    
T  9390403 taaataatataatgatttgtttctataagtacaattgcaaggaactgagattttacagacacacacaccaacat-------------cgcttcatgattt 9390317  T
Q  146 catcggcaattgttgaaataatttcggtagttaactgctgccgattctttacttatgcagttaactaccgatgaggtatttaggtaaattactaatgttt 245  Q
    |||||||| ||   |||  ||||||||||||||||||  || | |||||||||| |||| ||||||  |||   || ||||  |||||||| || |||||    
T  9390316 catcggcagttaccgaagaaatttcggtagttaactgtcgctggttctttacttctgcaattaactgtcgagagggcatttgagtaaattattagtgttt 9390217  T
Q  246 cacaaccaaattaaacgtgtcttcaacaattttcttannnnnnngcta--------ctttcgagtaaaaaagtcaa-attgtacgttttgaccattattt 336  Q
    | |   |||| |||| ||||||| | |||||||||||        |||        |||| ||||||||||||||| |||||||||||||||||||||||    
T  9390216 ctcggtcaaactaaatgtgtcttgagcaattttcttatttttttactaagtgaaaactttagagtaaaaaagtcaatattgtacgttttgaccattattt 9390117  T
Q  337 caactcattgagattgattgacaagtttaatcta---atagagccaactggcgttttaaaaaagcatgcatttatattgct 414  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  9390116 caactcattgagattgattgacaagtttaatctatatatagagccaactggcgttttaaaaaagcatgcatttatattgct 9390036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 441 - 546
Target Start/End: Complemental strand, 9390009 - 9389901
Alignment:
Q  441 tgcattcttcctattttaccctaaagacaaaa-tgattaggatggacaaagttatgaagggtga--aggagtggaaatgtaccgacacgaccataatttg 537  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||    
T  9390009 tgcattcttcctattttaccctaaagacaaaaatgattaggatggacaaagttatgaagggtgtgcaggagtggaaaagtaccgacacgaccataatttg 9389910  T
Q  538 tgatgatag 546  Q
    |||||||||    
T  9389909 tgatgatag 9389901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 279
Target Start/End: Original strand, 9391164 - 9391275
Alignment:
Q  168 ttcggtagttaactgctgccgattctttacttatgcagttaactaccgatgaggtatttaggtaaattactaatgtttcacaaccaaattaaacgtgtct 267  Q
    |||||||||||||||  |||| |||||||||| ||| |||||||  ||| | ||||||| |||||||||||| |||||| || ||||| |||| ||||||    
T  9391164 ttcggtagttaactgtcgccggttctttacttctgcggttaactgacgagggggtatttgggtaaattactagtgtttctcagccaaactaaatgtgtct 9391263  T
Q  268 tcaacaattttc 279  Q
    ||||||||||||    
T  9391264 tcaacaattttc 9391275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14196660 - 14196614
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14196660 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 14196614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25485998 - 25485949
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  25485998 tttttaaatgacgcttaattgcaaggactaatcacatcattaaacctaaa 25485949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14196967 - 14197011
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagc 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  14196967 tttttaaacgacgcctaattgcaaggactaatcacatcattaagc 14197011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 32593535 - 32593488
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  32593535 tttttaaatgacgcctaattgaaaggactaaacacatcattaagccta 32593488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 10781192 - 10781142
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaat 51  Q
    ||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  10781192 tttttaaatgacgcctaattgtaaggacgaaacacatcattaagcctaaat 10781142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6517548 - 6517503
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  6517548 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 6517503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21836411 - 21836460
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||    
T  21836411 tttttaaatgacgcctaattgcaaggatgaaacacatcattaagcctaaa 21836460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22502819 - 22502770
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  22502819 tttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctaaa 22502770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7905288 - 7905244
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagc 45  Q
    |||||||||||||||||||||||||||| || |||||||||||||    
T  7905288 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 7905244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7160849 - 7160802
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||    
T  7160849 tttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 7160802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22503155 - 22503201
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || ||||| |||||||||    
T  22503155 tttttaaatgacgcctaattgcaaggacgaaacacattattaagcct 22503201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31407259 - 31407301
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  31407259 tttttaaatgacgcctaattgcaaggacgaagcacatcattaa 31407301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7161185 - 7161234
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  7161185 tttttaaatgacgcctaattgcaaggacgaaatatatcattaagcctaaa 7161234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15913929 - 15913978
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||| | ||||||||||||| || ||||||||||||||||||    
T  15913929 tttttaaatgacccttaattgcaaggacgaaacacatcattaagcctaaa 15913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31406923 - 31406878
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||    
T  31406923 tttttaaatgacgcctaattgcaaggacgaaacacattattaagcc 31406878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 362915 - 362869
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  362915 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 362869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21836077 - 21836035
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    ||||||||||||||||||||||||| || || |||||||||||    
T  21836077 tttttaaatgacgcctaattgcaagaacgaaacacatcattaa 21836035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 363182 - 363227
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  363182 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 363227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28000430 - 28000381
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||| ||||||    
T  28000430 tttttaaatgccgcctaattgcaagggctaaacacatcaataaacctaaa 28000381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 18746485 - 18746556
Alignment:
Q  47 taaataatataatgatttgcttccataagtacaa-tgcaagcaactgagattttacaaacgcacacaccaac 117  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  18746485 taaataatataatgatttgcttccataagtacaactgcaaggaactgagattttacacacgcacacaccaac 18746556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36314343 - 36314294
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36314343 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 36314294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48322729 - 48322784
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaataatat 56  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  48322729 tttttaaacgacgcctaattgcaaggactaatcacatcattaagcctaattaatat 48322784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10770535 - 10770486
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10770535 tttttaaatgacgcctaattgcaaggactaatcacatcattaaacctaaa 10770486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 165 - 255
Target Start/End: Complemental strand, 18745968 - 18745878
Alignment:
Q  165 aatttcggtagttaactgctgccgattctttacttatgcagttaactaccgatgaggtatttaggtaaattactaatgtttcacaaccaaa 255  Q
    |||||||| |||||||||| |||||||||||||||  |||||||| || ||| |||  ||||  |||||||||||||||||| ||||||||    
T  18745968 aatttcggcagttaactgccgccgattctttacttgagcagttaattatcgaggagacattttagtaaattactaatgtttctcaaccaaa 18745878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36314650 - 36314695
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  36314650 tttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 36314695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10770843 - 10770890
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  10770843 tttttaaatgacgcctaattgtaaggactaatcacatcattaaaccta 10770890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48322422 - 48322375
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  48322422 tttttaaatgatgtctaattgcaaggactaatcacatcattaagccta 48322375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13949076 - 13949126
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaat 51  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||    
T  13949076 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagccaaaat 13949126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32306469 - 32306423
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  32306469 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 32306423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37778654 - 37778700
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  37778654 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 37778700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40788801 - 40788847
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  40788801 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 40788847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3469581 - 3469630
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||||||| || || |||||||||||||||    
T  3469581 tttttaaatgacgcctaattgcaaggacgaaacagatcattaagcctaaa 3469630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10294612 - 10294567
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  10294612 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 10294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13948825 - 13948776
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  13948825 tttttaaatgatgcctaattgcaaggacgaaacacatcattaagcctaaa 13948776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42855688 - 42855733
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||    
T  42855688 tttttaaatgacgcctaattgcaagggctaaacacatcattaagcc 42855733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52032183 - 52032135
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||||    
T  52032183 tttttaaatgacgcctaattgcaaggacaaaacacatcattaaacctaa 52032135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 33156377 - 33156424
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||    
T  33156377 tttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 33156424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 33506223 - 33506180
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  33506223 tttttaaatgacgcctaattgcaaggacgaaacacatcattaag 33506180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3469245 - 3469199
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||| ||| || |||||||||||||||    
T  3469245 tttttaaatgacgcctaattgcaaagacgaaacacatcattaagcct 3469199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8041661 - 8041611
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaat 51  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||||||    
T  8041661 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaaat 8041611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 279
Target Start/End: Original strand, 18746611 - 18746725
Alignment:
Q  165 aatttcggtagttaactgctgccgattctttacttatgcagttaactaccgatgaggtatttaggtaaattactaatgtttcacaaccaaattaaacgtg 264  Q
    ||||||||||||||||||| |||||||||||||||    |||||||| | || |  |  |||||||||||||||| |||||| ||   ||| |||| |||    
T  18746611 aatttcggtagttaactgccgccgattctttacttcgatagttaactgctgagggagcttttaggtaaattactagtgtttctcagttaaactaaatgtg 18746710  T
Q  265 tcttcaacaattttc 279  Q
    |||||| ||||||||    
T  18746711 tcttcagcaattttc 18746725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29118919 - 29118965
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||    
T  29118919 tttttaaatgacgcctaattgcaaggacgaaacacatcattatgcct 29118965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32306805 - 32306847
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  32306805 tttttaaatgacgcctaattgcaaggacgaaacacatcattaa 32306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52032520 - 52032566
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||    
T  52032520 tttttaaatgacgtctaattgcaaggacgaaacacatcattaagcct 52032566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 11910744 - 11910695
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||||||| |||||||||||||| || |||||||||||| |||||    
T  11910744 tttttaaatgacgtctaattgcaaggacgaaacacatcattaagactaaa 11910695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41422017 - 41421968
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||| |||||||||||||||||||| || ||||||||||| ||||||    
T  41422017 tttttaactgacgcctaattgcaaggacgaaacacatcattaaacctaaa 41421968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29118572 - 29118529
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    |||||||||||||| ||||||||||||| || ||||||||||||    
T  29118572 tttttaaatgacgcataattgcaaggacgaaacacatcattaag 29118529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29685986 - 29685943
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    |||||||||||||||||||||||||||| ||  |||||||||||    
T  29685986 tttttaaatgacgcctaattgcaaggacgaaatacatcattaag 29685943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29686321 - 29686364
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    |||| ||||||||||||||||||||||| || ||||||||||||    
T  29686321 ttttaaaatgacgcctaattgcaaggacgaaacacatcattaag 29686364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3596154 - 3596112
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    ||||||||| |||||||||||||||||| || |||||||||||    
T  3596154 tttttaaatcacgcctaattgcaaggacgaaacacatcattaa 3596112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33506331 - 33506377
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||| ||||||||||| |||||| || |||||||||||||||    
T  33506331 tttttaaataacgcctaattgaaaggacgaaacacatcattaagcct 33506377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47551538 - 47551492
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||||  |||||||||||||| || |||||||||||||||    
T  47551538 tttttaaatgacatctaattgcaaggacgaaacacatcattaagcct 47551492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 54466468 - 54466419
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||| ||||||    
T  54466468 tttttaaatgccgcctaattgcaagggctaaacacatcaataaacctaaa 54466419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23507808 - 23507857
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23507808 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 23507857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11675046 - 11675093
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11675046 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 11675093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23505097 - 23505050
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23505097 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 23505050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 11674740 - 11674690
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaat 51  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11674740 tttttaaacgacgcctaattgcaaggactaatcacatcattaagcctaaat 11674690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36325586 - 36325628
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  36325586 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 36325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6471735 - 6471686
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  6471735 tttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctaaa 6471686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6472396 - 6472441
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  6472396 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 6472441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15229976 - 15229931
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  15229976 tttttaaatgacgcctaattgcaaggacaaaacacatcattaagcc 15229931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 234121 - 234168
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||    
T  234121 tttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 234168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 710532 - 710579
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||    
T  710532 tttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 710579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 747744 - 747791
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||    
T  747744 tttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 747791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 871639 - 871686
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||    
T  871639 tttttaaatgatgcctaattgcaaggacgaaacacatcattaagccta 871686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7983473 - 7983426
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||    
T  7983473 tttttaaatgacgcctaattgcaaggacgaaacacataattaagccta 7983426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8998070 - 8998113
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  8998070 tttttaaatgacgcctaattgcaaggacgaaacacatcattaag 8998113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35634480 - 35634527
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||    
T  35634480 tttttaaatgacgcttaattgcaaggacgaaacacatcattaagccta 35634527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44664889 - 44664932
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  44664889 tttttaaatgacgcctaattgcaaggacgaaacacatcattaag 44664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8997901 - 8997859
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  8997901 tttttaaatgacgcctaattgcaaggacgaaacacatcattaa 8997859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15230312 - 15230358
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||    
T  15230312 tttttaaatgacacctaattgcaaggacaaaacacatcattaagcct 15230358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36325279 - 36325233
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||| ||| |||||||| |||||||||||||||||||||||||    
T  36325279 tttttaaacgacccctaattgtaaggactaatcacatcattaagcct 36325233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38845651 - 38845700
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  38845651 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaaa 38845700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 44664553 - 44664508
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||    
T  44664553 tttttaaatgacgcctaattgcaaggacgaaacacataattaagcc 44664508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10445716 - 10445763
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||| ||||||||||||||| || ||||||||||| ||||    
T  10445716 tttttaaatgacacctaattgcaaggacgaaacacatcattaaaccta 10445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2266537 - 2266491
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  2266537 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 2266491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2266844 - 2266890
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  2266844 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 2266890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37542269 - 37542227
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||||||| ||| || |||||||||||    
T  37542269 tttttaaatgacgcctaattgcaaagacgaaacacatcattaa 37542227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40775695 - 40775649
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  40775695 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 40775649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41353954 - 41354000
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||||||||||||  |||||| || |||||||||||||||    
T  41353954 tttttaaatgacgcctaattataaggacgaaacacatcattaagcct 41354000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42945495 - 42945537
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    ||||||||||||||||||||||||| || || |||||||||||    
T  42945495 tttttaaatgacgcctaattgcaagaacgaaacacatcattaa 42945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3041808 - 3041857
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||| ||||||||||||||  |||| ||||||| ||||||||||    
T  3041808 tttttaaatgccgcctaattgcaagagctaaacacatcaataagcctaaa 3041857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25124944 - 25124989
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||| ||||||||||||||| || ||||| ||||||||    
T  25124944 tttttaaatgacacctaattgcaaggacgaaacacatgattaagcc 25124989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44407209 - 44407254
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  44407209 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 44407254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44406902 - 44406854
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||| |||||    
T  44406902 tttttaaatgccgcctaattgcaagggctaaacacatcaataaacctaa 44406854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 9e-19; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32680640 - 32680592
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32680640 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 32680592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32680947 - 32680994
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  32680947 tttttaaacgacgcctaattgcaaggactaatcacatcattaagccta 32680994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43266647 - 43266697
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaat 51  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  43266647 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaat 43266697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43266311 - 43266262
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  43266311 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaa 43266262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32934729 - 32934775
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  32934729 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 32934775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25453173 - 25453128
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  25453173 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 25453128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42617956 - 42617911
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  42617956 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 42617911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23058810 - 23058861
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaata 52  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||| ||||    
T  23058810 tttttaaatgacgccgaattgcaaggacgaaacacatcattaagccttaata 23058861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42618292 - 42618339
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||    
T  42618292 tttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 42618339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46204466 - 46204424
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  46204466 tttttaaatgacgcctaattgcaaggacgaaacacatcattaa 46204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10600071 - 10600026
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||    
T  10600071 tttttaaatgacgcctaattgcaaggacgaaacacatcatttagcc 10600026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22081605 - 22081560
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||    
T  22081605 tttttaaatgacgcataattgcaaggacgaaacacatcattaagcc 22081560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32068477 - 32068522
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||    
T  32068477 tttttaaatgactcctaattgcaaggacgaaacacatcattaagcc 32068522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33828355 - 33828404
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||| ||||||||||||||| || | ||||||||||||||||    
T  33828355 tttttaaatgacacctaattgcaaggacgaaactcatcattaagcctaaa 33828404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10600330 - 10600382
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaataa 53  Q
    |||||||||||||||||||||||| ||| || ||||||||||| || ||||||    
T  10600330 tttttaaatgacgcctaattgcaatgacgaaacacatcattaaaccaaaataa 10600382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34929002 - 34929049
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  34929002 tttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 34929049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39686886 - 39686933
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  39686886 tttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 39686933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25628523 - 25628481
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    ||||||||||||||||||||||||| || || |||||||||||    
T  25628523 tttttaaatgacgcctaattgcaagcacgaaacacatcattaa 25628481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27138322 - 27138368
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||| |||| |||||| || |||||||||||||||    
T  27138322 tttttaaatgacgcctgattgaaaggacgaaacacatcattaagcct 27138368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28890624 - 28890582
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    ||||||||||||| |||||||||||||| || |||||||||||    
T  28890624 tttttaaatgacgtctaattgcaaggacgaaacacatcattaa 28890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30948512 - 30948558
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  30948512 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 30948558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 32068141 - 32068099
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    ||||||||||||| |||||||||||||| || |||||||||||    
T  32068141 tttttaaatgacgtctaattgcaaggacgaaacacatcattaa 32068099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34928695 - 34928649
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  34928695 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 34928649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22081940 - 22081985
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||| ||||||||||||| || || |||||||||||    
T  22081940 tttttaaatgacgcataattgcaaggacgaaacaaatcattaagcc 22081985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23058474 - 23058429
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||| | ||||||||||||| || ||||||||||||||    
T  23058474 tttttaaatgactcttaattgcaaggacgaaacacatcattaagcc 23058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18087721 - 18087757
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacat 37  Q
    |||||||||||| |||||||||||||||||| |||||    
T  18087721 tttttaaatgacccctaattgcaaggactaaacacat 18087757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24905212 - 24905165
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24905212 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 24905165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28011720 - 28011766
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28011720 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 28011766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 40714489 - 40714432
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaataatataa 58  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  40714489 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaatactataa 40714432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49955728 - 49955777
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  49955728 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaa 49955777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 37929463 - 37929416
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  37929463 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 37929416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40714824 - 40714871
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  40714824 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 40714871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 45750223 - 45750270
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  45750223 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 45750270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8898562 - 8898516
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  8898562 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 8898516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25885374 - 25885420
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  25885374 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 25885420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 26602798 - 26602860
Alignment:
Q  52 aatataatgatttgcttccataagtacaa-tgcaagcaactgagattttacaaacgcacacac 113  Q
    ||||||||| ||||| ||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  26602798 aatataatggtttgcatccataagtacaactgcaaggaactgagattttacacacgcacacac 26602860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17188999 - 17188954
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  17188999 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 17188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30326541 - 30326496
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  30326541 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 30326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31050995 - 31050946
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||| |||||||||||||||||| || ||||||||||||||||||    
T  31050995 tttttaaataacgcctaattgcaaggacgaaacacatcattaagcctaaa 31050946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28325184 - 28325232
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    |||||||||||||||||||||||||| | || |||||||||||||||||    
T  28325184 tttttaaatgacgcctaattgcaaggccgaaacacatcattaagcctaa 28325232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8898898 - 8898944
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||    
T  8898898 tttttaaatgacgcctaattacaaggacgaaacacatcattaagcct 8898944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20760886 - 20760932
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||||||||||||| |||||| || |||||||||||||||    
T  20760886 tttttaaatgacgcctaattgtaaggacgaaacacatcattaagcct 20760932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45749887 - 45749841
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||  || |||||||||||||||    
T  45749887 tttttaaatgacgcctaattgcaaggatgaaacacatcattaagcct 45749841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17189232 - 17189277
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||    
T  17189232 tttttaaatgacgtctaattgcaaggacgaaacacatcattaagcc 17189277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49955392 - 49955347
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||    
T  49955392 tttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 49955347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 25884745 - 25884697
Alignment:
Q  2 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||| |||||||||| ||| || ||||||||||||||||||    
T  25884745 ttttaaatgacgtctaattgcaatgacgaaacacatcattaagcctaaa 25884697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32558488 - 32558536
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    ||||||||||||| ||||||| |||||| || |||||||||||||||||    
T  32558488 tttttaaatgacgtctaattgtaaggacaaaacacatcattaagcctaa 32558536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 44523519 - 44523562
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    ||||||||||| |||||||||||||||| || ||||||||||||    
T  44523519 tttttaaatgaggcctaattgcaaggacgaaacacatcattaag 44523562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7371550 - 7371596
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||||| |||||||||||||| || |||||| ||||||||    
T  7371550 tttttaaatgacgtctaattgcaaggacgaaacacatcgttaagcct 7371596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31058438 - 31058484
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||| | |||||||||||||| || |||||||||||||||    
T  31058438 tttttaaatgatgtctaattgcaaggacgaaacacatcattaagcct 31058484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 28324849 - 28324804
Alignment:
Q  2 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||| ||||||||||||||||||  || |||||||||||||||    
T  28324849 ttttaaacgacgcctaattgcaaggaggaaacacatcattaagcct 28324804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33442639 - 33442594
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  33442639 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 33442594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 52134420 - 52134465
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  52134420 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 52134465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52134113 - 52134065
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    |||||||||  ||||||||||||||| |||| ||||||| |||||||||    
T  52134113 tttttaaataccgcctaattgcaagggctaaacacatcaataagcctaa 52134065  T

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Target: scaffold0205 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21054 - 21008
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21054 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 21008  T

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Target: scaffold0205; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21321 - 21366
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||| |||  ||||||||||||||||||||||||||||||||    
T  21321 tttttaaacgacctctaattgcaaggactaatcacatcattaagcc 21366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22567138 - 22567184
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22567138 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 22567184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4983078 - 4983123
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  4983078 tttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 4983123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9400564 - 9400519
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  9400564 tttttaaatgacacctaattgcaaggactaatcacatcattaagcc 9400519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3032627 - 3032581
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  3032627 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 3032581  T

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Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27069291 - 27069337
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  27069291 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 27069337  T

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Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27934577 - 27934531
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  27934577 tttttaaacgacccctaattgcaaggactaatcacatcattaagcct 27934531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 52573609 - 52573655
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  52573609 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 52573655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 54858605 - 54858559
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  54858605 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 54858559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 54858941 - 54858987
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  54858941 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 54858987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4982771 - 4982726
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  4982771 tttttaaattacgtctaattgcaaggactaatcacatcattaagcc 4982726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 27149377 - 27149422
Alignment:
Q  2 ttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||||||||||||||||||| || |||||||||||||||    
T  27149377 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 27149422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27934870 - 27934907
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27934870 tttttaaatgacgcctaattgcaaggactaatcacatc 27934907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 52573273 - 52573224
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  52573273 tttttaaatgacgcctaattgcaaagacgaaacacatcattaagcctaaa 52573224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 9400871 - 9400914
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    |||||||| ||| |||||||||||||||||||||||||||||||    
T  9400871 tttttaaacgacccctaattgcaaggactaatcacatcattaag 9400914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16605647 - 16605600
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||    
T  16605647 tttttaaatgacacctaattgcaaggacgaaacacatcattaagccta 16605600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39701290 - 39701337
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||    
T  39701290 tttttaaatgacgcctaattgcaaggacgaaacacatcattaaaccta 39701337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45463118 - 45463075
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaag 44  Q
    |||||||||||||||||||||||||||| || ||||||||||||    
T  45463118 tttttaaatgacgcctaattgcaaggacgaaacacatcattaag 45463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50504206 - 50504253
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||    
T  50504206 tttttaaatgacgcctaattacaaggacgaaacacatcattaagccta 50504253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11523994 - 11523952
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||||||||||| || |||||||||||    
T  11523994 tttttaaatgacgcctaattgcaaggacgaaacacatcattaa 11523952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34837426 - 34837476
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaat 51  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||||||    
T  34837426 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaaat 34837476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10407934 - 10407889
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||    
T  10407934 tttttaaatgactcctaattgcaaggacgaaacacatcattaagcc 10407889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10408270 - 10408315
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || |||| |||||||||    
T  10408270 tttttaaatgacgcctaattgcaaggacgaaacacaacattaagcc 10408315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27068955 - 27068906
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||||| |||||||||||||||| || |||||| |||||||||||    
T  27068955 tttttaaatgatgcctaattgcaaggacgaaacacatccttaagcctaaa 27068906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42738076 - 42738028
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  42738076 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaa 42738028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51859787 - 51859835
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    ||||||||| ||| |||||||||||||| || |||||||||||||||||    
T  51859787 tttttaaattacgtctaattgcaaggacgaaacacatcattaagcctaa 51859835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 32950494 - 32950545
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaata 52  Q
    |||||||||| | ||||||||||||| |||| ||||||| ||||||||||||    
T  32950494 tttttaaatgccacctaattgcaagggctaaacacatcaataagcctaaata 32950545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 51203654 - 51203607
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  51203654 tttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 51203607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9145118 - 9145164
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  9145118 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 9145164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22987232 - 22987278
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||||| ||||||| |||||| || |||||||||||||||    
T  22987232 tttttaaatgacgtctaattgtaaggacgaaacacatcattaagcct 22987278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32950187 - 32950141
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  32950187 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 32950141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 33247625 - 33247667
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||| ||  ||||||||||||||||||||||||||||||    
T  33247625 tttttaaacgatccctaattgcaaggactaatcacatcattaa 33247667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34837119 - 34837073
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  34837119 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 34837073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42738383 - 42738429
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  42738383 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 42738429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45463454 - 45463496
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||||||||||| || || ||||||||    
T  45463454 tttttaaatgacgcctaattgcaaggacgaaacatatcattaa 45463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 50503870 - 50503824
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||| |||||||||| ||||| || |||||||||||||||    
T  50503870 tttttaaatgatgcctaattgcgaggacgaaacacatcattaagcct 50503824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38012522 - 38012567
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  38012522 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 38012567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 9e-16; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14900541 - 14900494
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14900541 tttttgaatgacgcctaattgcaaggactaatcacatcattaagccta 14900494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8710849 - 8710895
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||||||||||||||||||| || |||||||||||||||    
T  8710849 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcct 8710895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14900833 - 14900879
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14900833 tttttaaacgacccctaattgcaaggactaatcacatcattaagcct 14900879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28226125 - 28226170
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||||||||||||||||| || ||||||||||||||    
T  28226125 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 28226170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13995718 - 13995664
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaataata 55  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||| |||||    
T  13995718 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaattaata 13995664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15604384 - 15604338
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||    
T  15604384 tttttaaatgacacctaattgcaaggacgaaacacatcattaagcct 15604338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11830409 - 11830365
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagc 45  Q
    ||||||||||||| |||||||||||||| || |||||||||||||    
T  11830409 tttttaaatgacgtctaattgcaaggacgaaacacatcattaagc 11830365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6573092 - 6573045
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    ||||||||||||||||||||||| |||| || ||||||||||| ||||    
T  6573092 tttttaaatgacgcctaattgcagggacgaaacacatcattaaaccta 6573045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8342232 - 8342185
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||| ||||||||||||| || ||||||||||| ||||    
T  8342232 tttttaaatgacgcttaattgcaaggacgaaacacatcattaaaccta 8342185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 13996025 - 13996072
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  13996025 tttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 13996072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1695785 - 1695739
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  1695785 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 1695739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8342560 - 8342602
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    ||||||||||||||||||||| |||||| || |||||||||||    
T  8342560 tttttaaatgacgcctaattgtaaggacgaaacacatcattaa 8342602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15604720 - 15604762
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||| ||||||||||||||| || |||||||||||    
T  15604720 tttttaaatgacacctaattgcaaggacaaaacacatcattaa 15604762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33062095 - 33062049
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  33062095 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 33062049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33062402 - 33062448
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  33062402 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 33062448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33739748 - 33739702
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  33739748 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 33739702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41587280 - 41587234
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||||| | ||||||||||||| || |||||||||||||||    
T  41587280 tttttaaatgactcttaattgcaaggacgaaacacatcattaagcct 41587234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41588439 - 41588483
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagc 45  Q
    ||||||||||||||||||||| |||||| || ||||| |||||||    
T  41588439 tttttaaatgacgcctaattgtaaggacgaaacacattattaagc 41588483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6758217 - 6758263
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  6758217 tttttaaacgacgcctaattgcaaggactaatcacatcattaagcct 6758263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 17544429 - 17544476
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  17544429 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagccta 17544476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41930868 - 41930910
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  41930868 tttttaaatgacgcctaattacaaggactaatcacatcattaa 41930910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 20153296 - 20153343
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||||    
T  20153296 tttttaaatgacacctaattgcaaggacgaaacacatcattaagccta 20153343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 6757910 - 6757876
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  6757910 tttttaaatgacgcctaattgcaaggactaatcac 6757876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33871719 - 33871765
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||    
T  33871719 tttttaaatggcgcctaattgcaaggacgaaacacatcattaagcct 33871765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41930561 - 41930515
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||| |||  |||||||||||||||||||||||||||||||||    
T  41930561 tttttaaacgacctctaattgcaaggactaatcacatcattaagcct 41930515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8875494 - 8875449
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||    
T  8875494 tttttaaatgacgcttaattgcaaggacgaaacacatcattaagcc 8875449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 297059 - 297011
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  297059 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaa 297011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1506012 - 1505964
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaa 49  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  1506012 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcctaa 1505964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 8875648 - 8875687
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcat 40  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  8875648 tttttaaatgacgcctaattgcaaggacgaaacacatcat 8875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3656799 - 3656845
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    ||||||||||||| |||||||||||| | || |||||||||||||||    
T  3656799 tttttaaatgacgtctaattgcaaggtcgaaacacatcattaagcct 3656845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31482754 - 31482800
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcct 47  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||    
T  31482754 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcct 31482800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 279
Target Start/End: Complemental strand, 204518 - 204441
Alignment:
Q  202 gcagttaactaccgatgaggtatttaggtaaattactaatgtttcacaaccaaattaaacgtgtcttcaacaattttc 279  Q
    |||||||||| |||| | || ||||  ||||||||||  |||||| || ||||| |||| ||||||||||||||||||    
T  204518 gcagttaactgccgaaggggcatttgagtaaattactggtgtttctcagccaaactaaatgtgtcttcaacaattttc 204441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20152826 - 20152781
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||    
T  20152826 tttttaaatgacgcttaattgcatggacgaaacacatcattaagcc 20152781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31482447 - 31482402
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||    
T  31482447 tttttaaatgccgcctaattgcaagggctaaacacatcaataagcc 31482402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33871384 - 33871339
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 46  Q
    |||||||||||| | ||||||||||||| || ||||||||||||||    
T  33871384 tttttaaatgacacttaattgcaaggacaaaacacatcattaagcc 33871339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 222170 - 222219
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  222170 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagcctaaa 222219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 221836 - 221794
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaa 43  Q
    ||||||||||||||||||||||||| || || |||||||||||    
T  221836 tttttaaatgacgcctaattgcaagaacgaaacacatcattaa 221794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 12620 - 12671
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaata 52  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||||||    
T  12620 tttttaaatgacgcctaattgcaaggacgaaacacatcattaaacctaaata 12671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1216 - 1266
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaat 51  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||||    
T  1216 tttttaaatgacgcctaattgcaaggacgaaacacatcattaagccaaaat 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 965 - 916
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||    
T  965 tttttaaatgatgcctaattgcaaggacgaaacacatcattaagcctaaa 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11521 - 11568
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||    
T  11521 tttttaaatgacgcctaattgcaaggatgaaacacatcattaagccta 11568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2438 - 2389
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagcctaaa 50  Q
    ||||||||||||| |||||||||||||| || |||||||||||| |||||    
T  2438 tttttaaatgacgtctaattgcaaggacgaaacacatcattaagactaaa 2389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 141946 - 141993
Alignment:
Q  1 tttttaaatgacgcctaattgcaaggactaatcacatcattaagccta 48  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||    
T  141946 tttttaaatgccgcctaattgcaagggctaaacacatcaataagccta 141993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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