View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9061_low_4 (Length: 680)

Name: NF9061_low_4
Description: NF9061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9061_low_4
NF9061_low_4
[»] chr4 (53 HSPs)
chr4 (1-384)||(48645234-48645618)
chr4 (385-665)||(48644920-48645200)
chr4 (99-363)||(49524557-49524822)
chr4 (103-372)||(35401740-35402010)
chr4 (99-363)||(20493827-20494092)
chr4 (103-366)||(54387711-54387973)
chr4 (69-363)||(43507167-43507462)
chr4 (123-353)||(39345574-39345805)
chr4 (69-363)||(320694-320989)
chr4 (69-363)||(43508447-43508742)
chr4 (69-363)||(33265804-33266099)
chr4 (103-363)||(51013714-51013975)
chr4 (69-363)||(4173534-4173829)
chr4 (69-358)||(43520903-43521193)
chr4 (69-363)||(33264382-33264678)
chr4 (69-363)||(319273-319568)
chr4 (137-359)||(11254123-11254345)
chr4 (70-363)||(5439442-5439736)
chr4 (136-363)||(42982313-42982541)
chr4 (70-363)||(833223-833517)
chr4 (70-363)||(834837-835131)
chr4 (70-363)||(5437811-5438105)
chr4 (182-364)||(4169685-4169867)
chr4 (182-360)||(2691377-2691554)
chr4 (186-362)||(20819986-20820156)
chr4 (45-144)||(11641860-11641959)
chr4 (283-360)||(41761790-41761867)
chr4 (386-450)||(48646855-48646918)
chr4 (43-121)||(54387686-54387763)
chr4 (284-363)||(48813787-48813866)
chr4 (283-362)||(49523125-49523204)
chr4 (287-360)||(7149542-7149615)
chr4 (283-364)||(51011925-51012006)
chr4 (1-41)||(833804-833844)
chr4 (69-165)||(4172311-4172407)
chr4 (1-41)||(5439115-5439155)
chr4 (213-277)||(41759492-41759556)
chr4 (283-363)||(43519424-43519504)
chr4 (257-360)||(2693271-2693373)
chr4 (103-162)||(11641884-11641943)
chr4 (286-363)||(35404492-35404569)
chr4 (283-363)||(41781539-41781619)
chr4 (1-41)||(42981982-42982022)
chr4 (1-41)||(51013364-51013404)
chr4 (283-342)||(48646791-48646850)
chr4 (69-128)||(49524561-49524620)
chr4 (1-41)||(11254628-11254668)
chr4 (324-360)||(11601674-11601710)
chr4 (1-41)||(41760297-41760337)
chr4 (1-41)||(54387381-54387421)
chr4 (69-128)||(20494029-20494088)
chr4 (283-342)||(52868193-52868252)
chr4 (136-165)||(2691606-2691635)
[»] chr6 (47 HSPs)
chr6 (1-366)||(10569645-10570011)
chr6 (45-360)||(21068628-21068944)
chr6 (104-373)||(6902727-6902996)
chr6 (91-363)||(9399851-9400124)
chr6 (45-319)||(21045354-21045629)
chr6 (103-363)||(7051073-7051334)
chr6 (69-364)||(32518291-32518587)
chr6 (103-364)||(11357024-11357284)
chr6 (99-363)||(20525158-20525423)
chr6 (103-377)||(21091092-21091355)
chr6 (69-364)||(18644898-18645193)
chr6 (137-346)||(33267078-33267288)
chr6 (103-363)||(13610690-13610941)
chr6 (69-363)||(32454248-32454542)
chr6 (69-363)||(3480452-3480746)
chr6 (133-363)||(7371175-7371406)
chr6 (1-128)||(7051005-7051132)
chr6 (69-279)||(32437211-32437422)
chr6 (103-359)||(33276805-33277053)
chr6 (167-342)||(14337687-14337861)
chr6 (46-128)||(6902703-6902785)
chr6 (45-127)||(21091297-21091379)
chr6 (300-365)||(8605351-8605416)
chr6 (283-363)||(6899485-6899565)
chr6 (56-128)||(33276994-33277066)
chr6 (283-359)||(10568403-10568479)
chr6 (283-362)||(20523367-20523446)
chr6 (68-126)||(9399862-9399920)
chr6 (1-41)||(6902396-6902436)
chr6 (283-363)||(32439135-32439215)
chr6 (1-41)||(32454859-32454899)
chr6 (1-41)||(11356632-11356672)
chr6 (283-363)||(13613626-13613706)
chr6 (1-41)||(18644658-18644698)
chr6 (1-41)||(32437729-32437769)
chr6 (1-41)||(33267595-33267635)
chr6 (290-348)||(14338526-14338584)
chr6 (285-363)||(32516877-32516955)
chr6 (283-360)||(7373002-7373079)
chr6 (1-41)||(7371681-7371721)
chr6 (1-41)||(9399555-9399595)
chr6 (68-128)||(11357023-11357083)
chr6 (1-41)||(20524814-20524854)
chr6 (288-362)||(11355223-11355297)
chr6 (302-359)||(7049790-7049847)
chr6 (137-165)||(14337898-14337926)
chr6 (295-363)||(32437140-32437208)
[»] chr2 (52 HSPs)
chr2 (1-367)||(19581410-19581777)
chr2 (99-360)||(19906685-19906947)
chr2 (99-363)||(16376736-16377001)
chr2 (103-363)||(39663154-39663413)
chr2 (103-363)||(39456608-39456869)
chr2 (99-363)||(34400314-34400573)
chr2 (99-360)||(6799231-6799494)
chr2 (69-363)||(16764406-16764700)
chr2 (103-306)||(42517614-42517818)
chr2 (71-363)||(24205598-24205891)
chr2 (103-363)||(40561706-40561967)
chr2 (69-365)||(14387347-14387644)
chr2 (167-360)||(37646371-37646564)
chr2 (69-363)||(2577275-2577569)
chr2 (70-363)||(37021981-37022274)
chr2 (99-305)||(17697933-17698140)
chr2 (164-360)||(31474969-31475166)
chr2 (145-363)||(6783364-6783583)
chr2 (167-360)||(161968-162160)
chr2 (257-363)||(14389122-14389228)
chr2 (283-372)||(40560214-40560303)
chr2 (283-363)||(16763076-16763156)
chr2 (274-365)||(37645485-37645576)
chr2 (283-363)||(2766934-2767014)
chr2 (274-365)||(19908301-19908393)
chr2 (283-363)||(39664812-39664892)
chr2 (283-365)||(17696204-17696286)
chr2 (283-369)||(44709809-44709895)
chr2 (1-41)||(6783935-6783975)
chr2 (1-41)||(24206180-24206220)
chr2 (68-128)||(42517759-42517819)
chr2 (69-128)||(16376938-16376997)
chr2 (1-41)||(2768320-2768360)
chr2 (1-41)||(17697613-17697653)
chr2 (1-41)||(34400880-34400920)
chr2 (1-41)||(37021624-37021664)
chr2 (1-37)||(40561356-40561392)
chr2 (104-161)||(6783592-6783649)
chr2 (283-359)||(42519269-42519346)
chr2 (68-128)||(39456607-39456667)
chr2 (1-41)||(39663712-39663752)
chr2 (5-41)||(42518127-42518163)
chr2 (69-128)||(17697937-17697996)
chr2 (69-128)||(19906884-19906943)
chr2 (69-128)||(34400510-34400569)
chr2 (55-101)||(31474893-31474939)
chr2 (325-363)||(42517558-42517596)
chr2 (136-165)||(161902-161931)
chr2 (1-38)||(6798912-6798949)
chr2 (136-165)||(31474906-31474935)
chr2 (56-109)||(37646293-37646346)
chr2 (283-363)||(6797507-6797587)
[»] chr3 (74 HSPs)
chr3 (1-363)||(48829356-48829721)
chr3 (43-363)||(51686162-51686483)
chr3 (45-366)||(610992-611314)
chr3 (43-363)||(46113873-46114195)
chr3 (103-360)||(42282301-42282559)
chr3 (103-364)||(23291569-23291830)
chr3 (103-362)||(2378811-2379071)
chr3 (103-353)||(17516801-17517052)
chr3 (69-358)||(2661702-2661992)
chr3 (103-366)||(21350433-21350697)
chr3 (69-363)||(53094067-53094362)
chr3 (99-360)||(54412371-54412633)
chr3 (103-363)||(30598337-30598598)
chr3 (69-371)||(3150244-3150547)
chr3 (69-365)||(38193304-38193601)
chr3 (103-363)||(44267981-44268242)
chr3 (69-372)||(46310230-46310534)
chr3 (69-363)||(46308807-46309102)
chr3 (103-363)||(41979180-41979441)
chr3 (69-363)||(46609149-46609444)
chr3 (69-363)||(46611097-46611392)
chr3 (69-363)||(53187742-53188037)
chr3 (103-363)||(7883328-7883589)
chr3 (103-363)||(35903825-35904086)
chr3 (103-363)||(54899902-54900163)
chr3 (69-363)||(53092623-53092918)
chr3 (123-363)||(27897151-27897391)
chr3 (69-363)||(44795684-44795979)
chr3 (123-307)||(43766895-43767080)
chr3 (69-363)||(38191895-38192178)
chr3 (70-363)||(28626411-28626705)
chr3 (283-363)||(27899145-27899225)
chr3 (283-364)||(53190823-53190904)
chr3 (283-363)||(2226216-2226296)
chr3 (283-363)||(21348723-21348803)
chr3 (283-363)||(23293234-23293314)
chr3 (274-363)||(51684610-51684699)
chr3 (283-363)||(54898437-54898517)
chr3 (45-128)||(42282277-42282360)
chr3 (283-365)||(46112485-46112567)
chr3 (175-354)||(24846447-24846626)
chr3 (283-360)||(2377032-2377109)
chr3 (284-361)||(43765139-43765216)
chr3 (68-128)||(17516800-17516860)
chr3 (283-363)||(30599982-30600062)
chr3 (1-41)||(41978830-41978870)
chr3 (1-41)||(42281979-42282019)
chr3 (1-41)||(51685857-51685897)
chr3 (1-41)||(53188347-53188387)
chr3 (274-357)||(2660218-2660301)
chr3 (283-365)||(17515308-17515390)
chr3 (283-360)||(42279510-42279587)
chr3 (283-363)||(600725-600805)
chr3 (1-41)||(7883896-7883936)
chr3 (1-41)||(27897762-27897802)
chr3 (1-41)||(35904396-35904436)
chr3 (283-363)||(41977750-41977830)
chr3 (195-269)||(23875760-23875834)
chr3 (68-121)||(30598546-30598599)
chr3 (99-139)||(2378764-2378804)
chr3 (1-41)||(21350101-21350141)
chr3 (68-128)||(23291771-23291831)
chr3 (1-41)||(23292141-23292181)
chr3 (283-342)||(35905776-35905835)
chr3 (325-363)||(7884950-7884988)
chr3 (1-41)||(2378420-2378460)
chr3 (68-128)||(2378810-2378870)
chr3 (68-128)||(21350432-21350492)
chr3 (1-41)||(24846053-24846093)
chr3 (9-41)||(30598907-30598939)
chr3 (9-41)||(43766536-43766568)
chr3 (1-41)||(44274915-44274955)
chr3 (283-363)||(44794208-44794287)
chr3 (1-41)||(46199126-46199166)
[»] chr8 (67 HSPs)
chr8 (103-363)||(26238726-26238987)
chr8 (68-365)||(41823888-41824186)
chr8 (99-363)||(42943250-42943515)
chr8 (103-366)||(22273719-22273983)
chr8 (104-363)||(5037893-5038150)
chr8 (45-278)||(3152042-3152276)
chr8 (69-363)||(27692631-27692926)
chr8 (69-366)||(29238981-29239279)
chr8 (103-363)||(43261967-43262226)
chr8 (69-363)||(33761069-33761364)
chr8 (103-360)||(13283823-13284081)
chr8 (103-363)||(38548659-38548920)
chr8 (69-363)||(35510613-35510908)
chr8 (69-364)||(601498-601794)
chr8 (103-363)||(8608237-8608499)
chr8 (103-363)||(13106804-13107065)
chr8 (103-362)||(33707207-33707467)
chr8 (69-363)||(29237151-29237446)
chr8 (69-363)||(33762511-33762802)
chr8 (103-363)||(41040720-41040982)
chr8 (69-363)||(35509214-35509509)
chr8 (137-364)||(13484544-13484771)
chr8 (70-363)||(15308056-15308350)
chr8 (70-363)||(15488425-15488719)
chr8 (70-360)||(27404213-27404504)
chr8 (165-319)||(17807063-17807217)
chr8 (206-341)||(15562446-15562580)
chr8 (43-128)||(26238928-26239013)
chr8 (43-162)||(41824126-41824245)
chr8 (283-360)||(26242378-26242455)
chr8 (167-348)||(29694210-29694391)
chr8 (283-360)||(41825708-41825785)
chr8 (283-363)||(8609851-8609931)
chr8 (244-360)||(9671980-9672096)
chr8 (283-363)||(34681075-34681155)
chr8 (283-364)||(13282477-13282558)
chr8 (283-365)||(7745176-7745258)
chr8 (283-360)||(42941777-42941854)
chr8 (103-165)||(41824157-41824219)
chr8 (274-362)||(5036446-5036534)
chr8 (1-41)||(13107375-13107415)
chr8 (1-41)||(13283473-13283513)
chr8 (1-41)||(15307729-15307769)
chr8 (1-41)||(15488098-15488138)
chr8 (1-41)||(26239280-26239320)
chr8 (1-41)||(27404791-27404831)
chr8 (283-363)||(27691154-27691234)
chr8 (1-41)||(29238631-29238671)
chr8 (1-41)||(38548309-38548349)
chr8 (3-41)||(8608809-8608847)
chr8 (304-369)||(600754-600819)
chr8 (1-41)||(22273379-22273419)
chr8 (283-363)||(38547228-38547308)
chr8 (315-362)||(9795535-9795582)
chr8 (283-363)||(22272334-22272416)
chr8 (65-128)||(41824092-41824155)
chr8 (68-128)||(41040922-41040983)
chr8 (283-363)||(13108400-13108480)
chr8 (1-41)||(41041282-41041322)
chr8 (283-363)||(41042648-41042728)
chr8 (1-41)||(41824510-41824550)
chr8 (1-41)||(42942906-42942946)
chr8 (68-128)||(43261966-43262026)
chr8 (136-165)||(15562646-15562675)
chr8 (5-41)||(29693813-29693849)
chr8 (69-121)||(38548659-38548711)
chr8 (1-41)||(40338370-40338410)
[»] chr1 (68 HSPs)
chr1 (43-364)||(52641887-52642209)
chr1 (69-363)||(37345756-37346051)
chr1 (103-364)||(2870904-2871166)
chr1 (104-363)||(31236819-31237079)
chr1 (103-360)||(3011858-3012116)
chr1 (99-362)||(50554164-50554428)
chr1 (69-365)||(8167940-8168236)
chr1 (81-363)||(25276742-25277025)
chr1 (69-363)||(26223587-26223882)
chr1 (103-360)||(51894570-51894828)
chr1 (69-368)||(27089073-27089373)
chr1 (69-363)||(8169362-8169657)
chr1 (103-352)||(33599229-33599479)
chr1 (103-364)||(46582009-46582271)
chr1 (103-363)||(34776569-34776830)
chr1 (99-363)||(37087960-37088225)
chr1 (103-363)||(4854410-4854671)
chr1 (104-279)||(45045004-45045180)
chr1 (69-363)||(47011456-47011750)
chr1 (69-364)||(1443976-1444271)
chr1 (69-363)||(9120039-9120333)
chr1 (103-272)||(6816928-6817106)
chr1 (283-363)||(25278997-25279077)
chr1 (182-317)||(23577682-23577817)
chr1 (281-371)||(25278846-25278936)
chr1 (283-364)||(2869578-2869659)
chr1 (283-363)||(3013520-3013600)
chr1 (191-352)||(3369441-3369602)
chr1 (274-363)||(25278403-25278492)
chr1 (274-363)||(37344342-37344431)
chr1 (283-363)||(31238539-31238619)
chr1 (283-365)||(34778182-34778264)
chr1 (283-365)||(50556141-50556223)
chr1 (1-41)||(1443636-1443676)
chr1 (1-41)||(4854968-4855008)
chr1 (283-363)||(4856010-4856090)
chr1 (1-41)||(9120650-9120690)
chr1 (69-161)||(25276979-25277071)
chr1 (283-363)||(27087283-27087363)
chr1 (1-41)||(34777139-34777179)
chr1 (1-41)||(47012050-47012090)
chr1 (1-41)||(52642474-52642514)
chr1 (103-165)||(25277009-25277071)
chr1 (283-360)||(52643659-52643736)
chr1 (283-363)||(6818722-6818802)
chr1 (1-37)||(26224196-26224232)
chr1 (1-41)||(27088723-27088763)
chr1 (1-41)||(33599790-33599830)
chr1 (68-128)||(51894769-51894829)
chr1 (283-363)||(51896196-51896276)
chr1 (301-364)||(33599186-33599249)
chr1 (283-365)||(9121712-9121794)
chr1 (70-194)||(20944885-20945010)
chr1 (68-128)||(3012057-3012117)
chr1 (1-41)||(3012425-3012465)
chr1 (1-41)||(15105830-15105870)
chr1 (1-41)||(31237389-31237429)
chr1 (1-41)||(37087616-37087656)
chr1 (283-363)||(46583600-46583680)
chr1 (1-41)||(50554750-50554790)
chr1 (295-362)||(6816866-6816933)
chr1 (69-128)||(37087964-37088023)
chr1 (69-128)||(50554365-50554424)
chr1 (70-128)||(31237021-31237079)
chr1 (283-360)||(33602688-33602765)
chr1 (326-363)||(45044949-45044986)
chr1 (43-75)||(15106133-15106165)
chr1 (244-364)||(47013087-47013207)
[»] chr7 (73 HSPs)
chr7 (91-366)||(47384291-47384567)
chr7 (103-371)||(24226573-24226842)
chr7 (103-363)||(13169511-13169772)
chr7 (103-364)||(37113940-37114202)
chr7 (103-360)||(39857648-39857906)
chr7 (103-359)||(35691431-35691688)
chr7 (182-365)||(46437105-46437288)
chr7 (103-360)||(6605225-6605483)
chr7 (69-363)||(35403413-35403708)
chr7 (103-365)||(34774996-34775259)
chr7 (69-370)||(35401962-35402264)
chr7 (137-360)||(48227803-48228027)
chr7 (69-279)||(29994961-29995172)
chr7 (196-363)||(38549547-38549714)
chr7 (103-363)||(22155686-22155936)
chr7 (103-363)||(22211601-22211851)
chr7 (69-372)||(20479514-20479817)
chr7 (133-363)||(45361134-45361365)
chr7 (103-360)||(37791657-37791915)
chr7 (146-360)||(27664433-27664648)
chr7 (103-245)||(38472378-38472521)
chr7 (123-363)||(77862-78103)
chr7 (99-363)||(23904583-23904861)
chr7 (168-354)||(13039536-13039722)
chr7 (43-155)||(38549714-38549826)
chr7 (283-360)||(37796225-37796302)
chr7 (274-365)||(39859264-39859355)
chr7 (283-363)||(47386253-47386333)
chr7 (283-360)||(24228453-24228530)
chr7 (182-342)||(48311641-48311801)
chr7 (103-165)||(46437834-46437896)
chr7 (274-363)||(38474178-38474267)
chr7 (283-364)||(46439542-46439623)
chr7 (1-41)||(77494-77534)
chr7 (1-41)||(20479157-20479197)
chr7 (68-128)||(22211600-22211660)
chr7 (283-363)||(27666109-27666189)
chr7 (283-363)||(30940469-30940549)
chr7 (284-364)||(37115571-37115651)
chr7 (68-128)||(38472462-38472522)
chr7 (1-41)||(38550092-38550132)
chr7 (68-128)||(47384496-47384556)
chr7 (68-127)||(6605224-6605283)
chr7 (293-360)||(13018036-13018103)
chr7 (283-341)||(13168142-13168200)
chr7 (283-369)||(34776959-34777045)
chr7 (103-164)||(38549739-38549800)
chr7 (274-363)||(45359336-45359425)
chr7 (283-363)||(56330-56410)
chr7 (68-128)||(22155685-22155745)
chr7 (68-128)||(24226783-24226843)
chr7 (1-41)||(34775610-34775650)
chr7 (68-128)||(35691629-35691689)
chr7 (1-41)||(35691997-35692037)
chr7 (56-128)||(37791856-37791928)
chr7 (1-41)||(45360773-45360813)
chr7 (1-41)||(46438206-46438246)
chr7 (1-41)||(48851118-48851158)
chr7 (302-363)||(23906295-23906356)
chr7 (1-41)||(24227118-24227158)
chr7 (68-128)||(34775200-34775260)
chr7 (68-128)||(37114143-37114203)
chr7 (1-41)||(37114500-37114540)
chr7 (68-128)||(39857847-39857907)
chr7 (292-363)||(29996567-29996638)
chr7 (136-165)||(13036358-13036387)
chr7 (325-362)||(29994907-29994944)
chr7 (1-41)||(6604877-6604916)
chr7 (1-41)||(22155337-22155377)
chr7 (1-41)||(22211252-22211292)
chr7 (1-41)||(38472822-38472862)
chr7 (68-128)||(46437837-46437897)
chr7 (1-41)||(47384854-47384894)
[»] chr5 (51 HSPs)
chr5 (130-363)||(8541126-8541360)
chr5 (99-369)||(28813589-28813862)
chr5 (103-363)||(12738564-12738825)
chr5 (103-363)||(12801387-12801648)
chr5 (103-363)||(30463900-30464161)
chr5 (99-360)||(28821915-28822176)
chr5 (69-361)||(17577729-17578022)
chr5 (103-363)||(32134231-32134497)
chr5 (103-366)||(34328651-34328919)
chr5 (103-363)||(7269274-7269535)
chr5 (69-365)||(21842786-21843083)
chr5 (146-364)||(2852885-2853104)
chr5 (69-363)||(40782006-40782300)
chr5 (69-363)||(29620138-29620432)
chr5 (165-367)||(41493840-41494042)
chr5 (104-365)||(42471546-42471808)
chr5 (182-319)||(27077375-27077512)
chr5 (283-363)||(8539675-8539755)
chr5 (285-363)||(36057659-36057737)
chr5 (283-363)||(17574318-17574398)
chr5 (283-363)||(7267843-7267923)
chr5 (283-366)||(34327632-34327715)
chr5 (103-165)||(2181524-2181586)
chr5 (69-192)||(24539933-24540057)
chr5 (1-41)||(7268933-7268973)
chr5 (1-41)||(21842439-21842479)
chr5 (68-128)||(30464102-30464162)
chr5 (1-41)||(40781666-40781706)
chr5 (1-41)||(42472130-42472170)
chr5 (286-364)||(2179786-2179864)
chr5 (283-353)||(43492142-43492212)
chr5 (4-41)||(17575375-17575412)
chr5 (4-41)||(17576095-17576132)
chr5 (4-41)||(17577406-17577443)
chr5 (283-360)||(18625052-18625129)
chr5 (283-363)||(24541256-24541336)
chr5 (1-41)||(29620749-29620789)
chr5 (274-363)||(30468315-30468404)
chr5 (1-41)||(2181208-2181248)
chr5 (68-128)||(2181523-2181583)
chr5 (1-41)||(8540781-8540821)
chr5 (68-128)||(12738563-12738623)
chr5 (68-128)||(12801386-12801446)
chr5 (1-41)||(30464512-30464552)
chr5 (325-364)||(2854412-2854451)
chr5 (194-262)||(19998360-19998430)
chr5 (69-128)||(28813593-28813652)
chr5 (2-41)||(32134806-32134845)
chr5 (1-41)||(18624015-18624055)
chr5 (1-41)||(34328310-34328350)
chr5 (1-41)||(41494404-41494444)
[»] scaffold0345 (3 HSPs)
scaffold0345 (103-364)||(1385-1645)
scaffold0345 (1-41)||(993-1033)
scaffold0345 (68-128)||(1384-1444)
[»] scaffold0004 (2 HSPs)
scaffold0004 (45-360)||(106673-106978)
scaffold0004 (1-41)||(107234-107274)
[»] scaffold1712 (1 HSPs)
scaffold1712 (70-363)||(982-1276)
[»] scaffold0058 (4 HSPs)
scaffold0058 (69-250)||(7031-7213)
scaffold0058 (224-363)||(14293-14432)
scaffold0058 (283-369)||(3288-3374)
scaffold0058 (283-369)||(4460-4546)
[»] scaffold0081 (1 HSPs)
scaffold0081 (69-363)||(54053-54347)
[»] scaffold0002 (1 HSPs)
scaffold0002 (287-366)||(436262-436341)
[»] scaffold0001 (1 HSPs)
scaffold0001 (170-245)||(63617-63692)
[»] scaffold0564 (1 HSPs)
scaffold0564 (283-361)||(8264-8342)


Alignment Details
Target: chr4 (Bit Score: 305; Significance: 1e-171; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 1 - 384
Target Start/End: Complemental strand, 48645618 - 48645234
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaaaaggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttcctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  48645618 attgaagctctctcacatcatcattgtacatagagcttgaaaaggagaaagagccgttggaaattttgcaattttctgaaaatcaatcaatttgttcctt 48645519  T
Q  101 gacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgt 199  Q
    | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||    
T  48645518 ggcaattttctgaaaatcaatcaatttgatccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgt 48645419  T
Q  200 aagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttc 299  Q
    ||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48645418 aagaggttaacaatacacgtcaccttcgttaacagaccaattgaacggaggtactgatttgatgaacattttgtaaattcgaggactaaatagatatttc 48645319  T
Q  300 gcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaaaatattgaattcagc 384  Q
    |||||||| | ||||||||| |  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  48645318 gcaaaattcatggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtctattaaaatattgaattcagc 48645234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 385 - 665
Target Start/End: Complemental strand, 48645200 - 48644920
Alignment:
Q  385 tgttgtaattgttgtaacaatattacatcgatatagatgaaaactgtccaatagttttaatcaaacaagacattatatatatgtatagcaactgctagta 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48645200 tgttgtaattgttgtaacaatattacatcgatatagatgaaaactgtccaatagttttaatcaaacaagacattatatatatgtatagcaactgctagta 48645101  T
Q  485 agtatacaagtaagcctttactaaaatgacatgactctaacgaaggggagtggggtgnnnnnnnnnnnnnnnnnnntatatgtgaaatgtcaaatattgt 584  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                   ||||||||||||||||||||||||    
T  48645100 agtatacaagtaagcctttactaaaatgacatgactctaacgaaggggagtggggtgaaaacaaaaaataaaaaaatatatgtgaaatgtcaaatattgt 48645001  T
Q  585 aatgtcagtggtgtggtttgatctatataatatttttgattcttctcttgctggctcgaccctacctctaatgggttactg 665  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48645000 aatgtcagtggtgtggtttgatctatataatatttttgattcttctcttgctggctcgaccctacctctaatgggttactg 48644920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 49524557 - 49524822
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    ||||||||||||| |||||| || |||||| |||||| |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||     
T  49524557 ttgacaattttctcaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatatgacgtggtaagcctg 49524656  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||| | |||||||||||  |||||||||||||||   |||||||||| ||||    
T  49524657 gtaagaggttaacgttacacgtcacctccgttaacagaccaacttaacggaaggactgatttgattgacattttgtaaattcagggactaaatagctatt 49524756  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    | |||||||| | ||||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  49524757 ttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 49524822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 103 - 372
Target Start/End: Complemental strand, 35402010 - 35401740
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| |||||||| || |||||| | ||||||||||||||||||||||||||||||||||  ||||||| || ||| ||||||||||||  ||||||    
T  35402010 caattttatgaaaatccatcaatttggtgcttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaaggtttgtaa 35401911  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||| |||||||||||  ||||||||||||||| | ||||||||||||||||| |    
T  35401910 gaggttaacgttacacgtcacctccgttaacagaccagcttaacggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcac 35401811  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaaaat 372  Q
    |||||| | ||||||||| ||  ||||||| |||||||||| |||||||||||||||||||| | ||||||    
T  35401810 aaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcaactaaaat 35401740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 20494092 - 20493827
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    |||||||||||||||||||| || |||||| |||||| ||||||| |||||||||||||||||||||  ||||||| || ||| ||||||||||||||||    
T  20494092 ttgacaattttctgaaaatccatcaatttggtccttgccaattttatgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagcctt 20493993  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||    ||||||||||||||    
T  20493992 gtaagaggttaacgttacacgtcacctccgttaacacaccaacttaacggagggactgatttgattgacattttgtaaattcaggaactaaatagatatt 20493893  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||| ||| ||||||| ||  ||| ||| |||||||||  ||||||||||||||||||||    
T  20493892 tcgcaaaattcaagaacgaatttggccgatattttaaaattcaatgacgaatttgaggtattagtc 20493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 103 - 366
Target Start/End: Original strand, 54387711 - 54387973
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| |||  ||||||| || ||| ||||||||||||||||||||    
T  54387711 caattttctgaaaatcaatcaatttggtccttggcaattttctgtaaatcaatcagtttagtccctgcttgcgtggcatttgacgtggtaagccttgtaa 54387810  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  54387811 gaggttaacggtacac-tcacctccgttaacagaccaacttaacggatgaactgatttgatggacattttgtaaattcgaggactaaatagatatttcgc 54387909  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    |||| ||| | || |||| || |||||||| |||||| ||| |||||||| || |||| ||||||    
T  54387910 aaaa-ttaggaactaatttggctgatttttaaaaatttaaggacgaatttaagatattggtctat 54387973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 43507462 - 43507167
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  43507462 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 43507363  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||||  |||    
T  43507362 gcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagtccaacttaacggagggactgatttgattgaca 43507263  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  43507262 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43507167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 123 - 353
Target Start/End: Complemental strand, 39345805 - 39345574
Alignment:
Q  123 aatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtca 221  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||  || ||| | | |||||||||||||||||||||||||  |||||||||    
T  39345805 aatttgatccttggcaattttctgtaaatcaatcaatttggtccctgcttgtgtggcatcttatgtggtaagccttgtaagaggttaacgttacacgtca 39345706  T
Q  222 cctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcg 321  Q
    |||||||||||| |||||||||||||||  |||||||||||  |||||||||||||||   |||||||||| |||||||||||||| | ||||||||| |    
T  39345705 cctccgttaacataccaacttaacggagagactgatttgattgacattttgtaaattcagggactaaatagctatttcgcaaaattcagggacgaatttg 39345606  T
Q  322 gttgatttttgaaaattcaagaacgaatttga 353  Q
    |  ||||||| |||||||||| ||||||||||    
T  39345605 gccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 320694 - 320989
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  320694 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 320793  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||| ||||||||||||||| ||||| |||||  |||    
T  320794 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacaggccaacttaacggagggactgagttgattgaca 320893  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||| ||| | |||||| | |||||||||||||||| ||||| ||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  320894 ttttgtaatttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 320989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 43508447 - 43508742
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  43508447 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 43508546  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||| ||||||||| ||||||||||||||| |||||||||||  |||    
T  43508547 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcaccttcgttaacaggccaacttaacggagggactgatttgattgaca 43508646  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  43508647 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43508742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 33265804 - 33266099
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  33265804 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttatgtaaatcaatcagtttggtccct 33265903  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||| ||||||||||||| |||||||||||  |||    
T  33265904 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagactaacttaacggagggactgatttgattgaca 33266003  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | | ||||| |  |  ||||||| |||||||||||||||||||||| ||||||||    
T  33266004 ttttgtaaattcagggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaagaacgaatttgagatattagtc 33266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 51013714 - 51013975
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||| |||||| || |||||| ||||||| |||||| ||||||| ||||| |||||||  ||||||| || ||| ||||||||||||| |||| |    
T  51013714 caattttctaaaaatccatcaatttggtccttggaaattttgtgtaaattaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtca 51013813  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||| | | ||||||| ||    
T  51013814 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactcatttgatattttgc 51013913  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||| | |   ||||||| |||||||||| ||||||||||||||||||||    
T  51013914 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 51013975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 4173534 - 4173829
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||| | |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  4173534 caattttctaaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 4173633  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||| ||||||   ||||||||||||||||||||| ||||||||||||||| ||||| |||||  ||     
T  4173634 gcttgcgtggcatctgacgtggtaagctttgtcagatgttaacgtgacacgtcacctccgttaacaggccaacttaacggagggactgagttgattgacg 4173733  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  4173734 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 4173829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 69 - 358
Target Start/End: Original strand, 43520903 - 43521193
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||| ||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||  |||||| ||||||||||||| |||||||  |    
T  43520903 caattttatgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtccct 43521002  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||| |||||||||| |||||||||||| | |||||||||||  |||    
T  43521003 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtaacacgtcacctacgttaacagaacaacttaacggaagaactgatttgattgaca 43521102  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtat 358  Q
    ||||||||||||   |||||| | |||||||||||||||| ||  ||||| | |  |||||||| ||||||||||||| ||||||||||||    
T  43521103 ttttgtaaattcagggactaatttgatatttcgcaaaattcaaaaacgaaattgactgatttttcaaaattcaagaacaaatttgaggtat 43521193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 33264678 - 33264382
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaa-ttttctgtaaatcaatcaatttggtc-a 166  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | || ||||  |||||||||||| ||||||| |    
T  33264678 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaaattttgcgtaaatcaatcagtttggtcca 33264579  T
Q  167 tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaac 266  Q
    ||||| | || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||  ||    
T  33264578 tgcttacgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgac 33264479  T
Q  267 attttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||||    ||||| | ||||||| |||||||| | ||||||| | |   ||||||| |||||||||| ||||||||||||||||||||    
T  33264478 attttgtaaattcaggaactaatttgatattttgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 33264382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 319568 - 319273
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||  ||||||||| ||||||  |||||| || ||||  || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  319568 caattttctgaaaattcatcaatttggtccttggaaattttgtgtaaatacatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 319469  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||  |||| ||||||||||   |||||||||||| |||||||||||||||||||||||| |||| ||||||  |||    
T  319468 gcttgcgtgacatctgacgtggtaagttttgtcagaggttaacgtgacacgtcacctctgttaacagaccaacttaacggagggactggtttgattgaca 319369  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||    ||||| | |||||||||||||||| | ||||||| | |   ||||||| |||||||||| ||||||||||||||||||||    
T  319368 ttttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 319273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 137 - 359
Target Start/End: Complemental strand, 11254345 - 11254123
Alignment:
Q  137 caattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacaga 235  Q
    ||||||| || ||||| ||||||||||||  |||||||||| ||| ||||||||||||||||||||||| | |||  ||||| ||||||||||||||| |    
T  11254345 caattttatgaaaatccatcaatttggtccctgcttgcatggcatctgacgtggtaagccttgtaagagat-aacgttacacatcacctccgttaacaaa 11254247  T
Q  236 ccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaa 335  Q
    ||||||||||||||| |||||||||||  ||||||||||||||| | ||| ||| || ||||||||||||||||  |||| ||| ||  ||||||| |||    
T  11254246 ccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaagagctatttcgcaaaatttagagacggatttggccgatttttaaaa 11254147  T
Q  336 attcaagaacgaatttgaggtatt 359  Q
    ||||||| ||||||||||||||||    
T  11254146 attcaaggacgaatttgaggtatt 11254123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 70 - 363
Target Start/End: Original strand, 5439442 - 5439736
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| |||||||| ||||||||||||  ||    
T  5439442 aattttctgaaaatccatcaatttgatccttggaaattttgtgtaaatccatcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctg 5439541  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| |||||||||| || |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  ||||    
T  5439542 cttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaatttaacggagggactaatttgattgacat 5439641  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||  | ||||||||| | |||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  5439642 tttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 5439736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 136 - 363
Target Start/End: Original strand, 42982313 - 42982541
Alignment:
Q  136 gcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacag 234  Q
    |||||||||| |||||||||||||||||||  ||||||  || ||| |||||||||||| ||||||| |||| |||  |||||||||||||||||||||     
T  42982313 gcaattttctctaaatcaatcaatttggtccctgcttgtgtggcatctgacgtggtaaggcttgtaaaaggtcaacgttacacgtcacctccgttaacac 42982412  T
Q  235 accaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaa 334  Q
    |||||||||||||||| |||||||||||  ||||||||||||||| | ||| |||||  |||||||||||||| | ||||||||| |   ||||||| ||    
T  42982413 accaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaataactatttcgcaaaattcagggacgaatttgacagatttttaaa 42982512  T
Q  335 aattcaagaacgaatttgaggtattagtc 363  Q
    |||||||| |  ||||| | |||||||||    
T  42982513 aattcaaggaaaaatttaacgtattagtc 42982541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 70 - 363
Target Start/End: Complemental strand, 833517 - 833223
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| |||||||  ||||||||||||  ||    
T  833517 aattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttagtccttcgaaattttgtgtaaattcatcaatttggtccctg 833418  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| |||||||||| || |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  ||||    
T  833417 cttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaatttaacggagggactaatttgattgacat 833318  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||  | ||||||||| | |||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  833317 tttgtaaattcagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 833223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 70 - 363
Target Start/End: Original strand, 834837 - 835131
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| |||||||| ||||||||||||  ||    
T  834837 aattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctg 834936  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| |||||||||| || |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  || |    
T  834937 cttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaatttaacggagggactaatttgattgacgt 835036  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||  | ||||||||| | |||| | |||| || | ||| ||||||| |||||||||| || | |||||||||||||||    
T  835037 tttgtaaattcagggactattttgatatttcgaataattcagggacaaaattggtcgatttttcaaaattcaaggactattttgaggtattagtc 835131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 70 - 363
Target Start/End: Complemental strand, 5438105 - 5437811
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| |||||||| ||||||||||||  ||    
T  5438105 aattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctg 5438006  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| ||||||| || || |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  ||||    
T  5438005 cttgcgtggcatctgacgtgttacgctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaatttaacggagggactaatttgattgacat 5437906  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||  | ||||||||| | |||| | ||||||| |  |  ||||||| |||||||||| || | |||||||||||||||    
T  5437905 tttgtaaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 5437811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 182 - 364
Target Start/End: Complemental strand, 4169867 - 4169685
Alignment:
Q  182 tgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcga 281  Q
    ||||||||||||| |||| ||||||||||   ||||||||||||| ||||||||||||||||||||||| |||| ||||||  |||||||||||||||      
T  4169867 tgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccattaacagaccaacttaacggagggactggtttgattgacattttgtaaattcag 4169768  T
Q  282 tgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
     |||||| | |||||||||||||||| |  |||||| | | |  |||||| |||||||||| |||||||||||||||||||||    
T  4169767 ggactaatttgatatttcgcaaaattcagagacgaaattgatcaatttttcaaaattcaaggacgaatttgaggtattagtct 4169685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 182 - 360
Target Start/End: Complemental strand, 2691554 - 2691377
Alignment:
Q  182 tgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcga 281  Q
    |||||||||||| |||||||| | ||||| || ||| |||||||| ||||||| |||||||||||||   |||||||||||  |||||||  ||||||      
T  2691554 tgacgtggtaagtcttgtaagcgattaacgatgcacatcacctcccttaacaggccaacttaacggattgactgatttgattgacattttaaaaattcag 2691455  T
Q  282 tgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
     |||||||||||||||| |||||||||  ||||||||| || ||||||||||||||||||| | ||| |||||||||||    
T  2691454 ggactaaatagatattttgcaaaatttgtggacgaatttggctgatttttgaaaattcaag-atgaagttgaggtatta 2691377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 186 - 362
Target Start/End: Complemental strand, 20820156 - 20819986
Alignment:
Q  186 gtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgac 285  Q
    ||||||||||||||||| ||||||      |||||||||| |||||||| ||||||||||||| | |||||||||||  |||||||| ||||||   |||    
T  20820156 gtggtaagccttgtaagcggttaa------acgtcacctctgttaacaggccaacttaacggatgaactgatttgattgacattttgaaaattcagggac 20820063  T
Q  286 taaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    |||||| |||||| |||||||||| | |  |||| |  ||||||||||||||||||| ||||| |||||||||||||    
T  20820062 taaataaatattttgcaaaatttaggaataaatttgactgatttttgaaaattcaaggacgaagttgaggtattagt 20819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 11641860 - 11641959
Alignment:
Q  45 gagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttc 144  Q
    ||||||||| |||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||| |||||||| |||||||||||||  |||||||    
T  11641860 gagaaagagacgttggaaattttgcaatttcctgtaaatcaatcaatttggtccttgacaattttctgtaaatcaatcaatttgatccttgataattttc 11641959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 41761790 - 41761867
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||||||||||||||||||||  ||||||||| ||  |||||||||||||||||| |||||||||||||||||    
T  41761790 gactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtatta 41761867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 386 - 450
Target Start/End: Complemental strand, 48646918 - 48646855
Alignment:
Q  386 gttgtaattgttgtaacaatattacatcgatatagatgaaaactgtccaatagttttaatcaaac 450  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48646918 gttgtaattgttgcaacaatattacatcgatatagatgaaaactgtccaatag-tttaatcaaac 48646855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 54387686 - 54387763
Alignment:
Q  43 aggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaat 121  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||||| |||||| |||||||||| ||||||||    
T  54387686 aggagaaagagtcgtgggaa-ttttgcaattttctgaaaatcaatcaatttggtccttggcaattttctgtaaatcaat 54387763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 363
Target Start/End: Complemental strand, 48813866 - 48813787
Alignment:
Q  284 actaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||| |||||| |||||||| | |||  |||| || ||||||||||||||||||| ||||||||||||||||||||    
T  48813866 actaaatatatattttgcaaaattcagggataaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 48813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 49523204 - 49523125
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    ||||||||||||||||||||||||| | |||||||||  |  ||||||| |||||||||  |||||||||||||||||||    
T  49523204 gactaaatagatatttcgcaaaattcatggacgaatttagccgattttttaaaattcaatgacgaatttgaggtattagt 49523125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 287 - 360
Target Start/End: Complemental strand, 7149615 - 7149542
Alignment:
Q  287 aaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||| |||||||||||||||||| || |||||||| ||||||||||||||||||| | |||||| | ||||||    
T  7149615 aaataaatatttcgcaaaatttaaagatgaattcggctgatttttgaaaattcaaggatgaattttatgtatta 7149542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 51012006 - 51011925
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||||||||||||||| ||| | ||||| |   ||||||| |||||||||| ||||||||||| |||||||||    
T  51012006 gactaaatagatatttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaaggacgaatttgagatattagtct 51011925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 833844 - 833804
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  833844 attgaagctctctcacatcatcattgtacatagagcttgaa 833804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 4172407 - 4172311
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtc 165  Q
    ||||||||||| |||| ||||||||| ||||||| |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||    
T  4172407 caattttctgaaaatccatcaatttggtccttgaaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtc 4172311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5439115 - 5439155
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5439115 attgaagctctctcacatcatcattgtacatagagcttgaa 5439155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 41759556 - 41759492
Alignment:
Q  213 tacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaat 277  Q
    ||||||||||||| ||| |||||||||||||||||||  |||||||||||  |||||||||||||    
T  41759556 tacacgtcacctctgttgacagaccaacttaacggagtgactgatttgattgacattttgtaaat 41759492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 43519504 - 43519424
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  43519504 gactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 43519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 257 - 360
Target Start/End: Original strand, 2693271 - 2693373
Alignment:
Q  257 tttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggt 356  Q
    ||||||| |||||||  |||||| | ||||||||||||||||||||||||||| | |  |||| || |||||||| |||||||||  ||||| |||||||    
T  2693271 tttgatggacatttta-aaattcaaagactaaatagatatttcgcaaaatttaggaataaatttggctgattttttaaaattcaaagacgaagttgaggt 2693369  T
Q  357 atta 360  Q
    ||||    
T  2693370 atta 2693373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 162
Target Start/End: Original strand, 11641884 - 11641943
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttg 162  Q
    |||||| ||| |||||||| |||||| |||||| ||||||||||||||||||||||||||    
T  11641884 caatttcctgtaaatcaatcaatttggtccttgacaattttctgtaaatcaatcaatttg 11641943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 363
Target Start/End: Original strand, 35404492 - 35404569
Alignment:
Q  286 taaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| ||||||||||||||| |||||||||||  |  ||||||| |||||||||| | |||| |||||||||||||    
T  35404492 taaataaatatttcgcaaaattgaaggacgaatttagccgattttttaaaattcaagtatgaatctgaggtattagtc 35404569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 41781619 - 41781539
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||| |||||| |||||||| | |||| |||| |   ||||||| ||||||||||||| |||||||||||||||||    
T  41781619 gactaaataaatattttgcaaaattcagggacaaatttgaccgattttttaaaattcaagaacaaatttgaggtattagtc 41781539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42981982 - 42982022
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  42981982 attgaagctctctcacctcatcattgtacatagagcttgaa 42982022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51013364 - 51013404
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  51013364 attgaagctctcttacatcatcattgtacatagagcttgaa 51013404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 48646791 - 48646850
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaag 342  Q
    ||||||||||||||||||| ||||| |||||||||||  | ||| |||||||||||||||    
T  48646791 gactaaatagatatttcgctaaattcaaggacgaatttagctgacttttgaaaattcaag 48646850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 49524561 - 49524620
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||| | |||| ||||||||| ||||||||||||||||| |||||||| ||||||    
T  49524561 caattttctcaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttg 49524620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11254668 - 11254628
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  11254668 attgaagctctctcacctcatcattgtacatagagcctgaa 11254628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 11601710 - 11601674
Alignment:
Q  324 tgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||||||||||||||||||||||||| ||||||||    
T  11601710 tgatttttgaaaattcaagaacgaattttaggtatta 11601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41760337 - 41760297
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  41760337 attgaagctctctcacctcatcattgtacatagaggttgaa 41760297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 54387381 - 54387421
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  54387381 attgaagctctctcacatcattattatacatagagcttgaa 54387421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 20494088 - 20494029
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||| |||| ||||||||| |||||| ||||||| || |||||||| ||||||    
T  20494088 caattttctgaaaatccatcaatttggtccttgccaattttatgtaaatcaatcaatttg 20494029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 52868193 - 52868252
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaag 342  Q
    |||||||||||||||||||||||||||  |||||||| |   ||||||| ||||||||||    
T  52868193 gactaaatagatatttcgcaaaatttatagacgaatttgaccgattttttaaaattcaag 52868252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Complemental strand, 2691635 - 2691606
Alignment:
Q  136 gcaattttctgtaaatcaatcaatttggtc 165  Q
    ||||||||||||||||||||||||||||||    
T  2691635 gcaattttctgtaaatcaatcaatttggtc 2691606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 366
Target Start/End: Original strand, 10569645 - 10570011
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaaaaggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttcctt 100  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  10569645 attgaagctcgctcacatcatcattgtacatagagcttgaagaggagaaagagtcgttgggaattttacaattttctgaaaatcaatcaatttgttcctt 10569744  T
Q  101 gacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggt-catgcttgcatgacatatgacgtggtaagccttgt 199  Q
    | ||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||| | | ||||||| || ||| |||| |||||||||  ||    
T  10569745 ggcaattttctgaaaatcaatcaatttggtctttggcaattttctgtaaatcaatcaatttgatccctgcttgcgtggcatctgacatggtaagccacgt 10569844  T
Q  200 aagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttc 299  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||     
T  10569845 aagaggttaacagtacacgtcacctccgttaacagaccaatttgacggagggactgatttgatggacattttgtaaattcgaggactaaatagatatttt 10569944  T
Q  300 gcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    |||||||| | ||||||||| || |||||||| |||||||||| |||||||||||||||||||||||    
T  10569945 gcaaaattcatggacgaatttggctgattttttaaaattcaaggacgaatttgaggtattagtctat 10570011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 45 - 360
Target Start/End: Complemental strand, 21068944 - 21068628
Alignment:
Q  45 gagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttc 144  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||||| | |||||||||||||||||||||||| |||||| |||||||||||||||    
T  21068944 gagaaagagtcgttggaaatttttcaattttgtgaaaatcaatcaatttgattcttgacaattttctgaaaatcaatcaatttggtccttggcaattttc 21068845  T
Q  145 tgtaaatcaatcaatttggtcat-gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaactta 243  Q
    | ||||||||||||||||||| | |||||| ||| || ||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  21068844 tataaatcaatcaatttggtccttgcttgcgtgatatctgacgtggtaagccttgtaagagattaacagtacacgtcacctccgttaacaggccaactta 21068745  T
Q  244 acggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaaga 343  Q
    ||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||| |||||||  ||||||||| |  ||||| |||||||||||||     
T  21068744 acggagggactgatttgattgacattttgtaaattcgaggactaaatagatatttcgtaaaatttgtggacgaatttgactgattgttgaaaattcaagg 21068645  T
Q  344 acgaatttgaggtatta 360  Q
    |||||||||||||||||    
T  21068644 acgaatttgaggtatta 21068628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 104 - 373
Target Start/End: Original strand, 6902727 - 6902996
Alignment:
Q  104 aattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    |||||||||||||||||| |||||  |||||| |||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||| ||||||||    
T  6902727 aattttctgaaaatcaatcaatttagtccttgacaattttctgtaaatcaatcaatttggtctctgcttgcgtgacatctgacgtggtaagtcttgtaag 6902826  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgca 302  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  6902827 aggttaacggtacacgtcacctccgttaacagaccaacttaacggagggactgatttgatggacattttgtaaattcgaggactaaatagata-ttcgca 6902925  T
Q  303 aaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaaaata 373  Q
    ||||||| ||||||||| |  ||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  6902926 aaatttagggacgaatttgactgatttttgaaaattcaaggacgaatttgaggtattagtcttttataata 6902996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 91 - 363
Target Start/End: Original strand, 9399851 - 9400124
Alignment:
Q  91 tttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtgg 189  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||  ||||||| || ||| | ||||||    
T  9399851 tttggtccttggcaattttctgaaaatcaatcaatttgatccttgacaattttctgtaaatcaatcaattaggtccctgcttgcgtggcatctaacgtgg 9399950  T
Q  190 taagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaa 289  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||  |||||||||||  | ||||||||||||||  ||||||     
T  9399951 taagccttgtaagaggttaacgttacacgtcacctctgttaacagaccaacttaacggagagactgatttgattgatattttgtaaattcggggactaat 9400050  T
Q  290 tagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||||||||| ||||| ||||| |  |||||||| |||||||||| ||||||||||||||||||||    
T  9400051 tagatatttcgcaaaattcaaggatgaatttgactgatttttcaaaattcaaggacgaatttgaggtattagtc 9400124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 45 - 319
Target Start/End: Complemental strand, 21045629 - 21045354
Alignment:
Q  45 gagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttc 144  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||| | |||||||||||||||||||||||| |||||| |||||| |||||||     
T  21045629 gagaaagagtcgttggaaattttgcaattttatgaaaatcaatcaatttgattcttgacaattttctgaaaatcaatcaatttggtccttgacaattttt 21045530  T
Q  145 tgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaactta 243  Q
      |||||||||||||||||||  ||||||| ||| || ||||||||||||||||||||||| |||||| |||||||||||||| ||| ||| | ||||||    
T  21045529 aataaatcaatcaatttggtccctgcttgcgtgatatctgacgtggtaagccttgtaagagattaacagtacacgtcacctccattaccaggctaactta 21045430  T
Q  244 acggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaatt 319  Q
    ||||| | |||||||||||  ||||||||||||||||  |||||||||||||||||| |||||||  |||||||||    
T  21045429 acggatggactgatttgattgacattttgtaaattcggggactaaatagatatttcgtaaaatttgtggacgaatt 21045354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 7051073 - 7051334
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  7051073 caattttctgaaaatcaatcaatttgttccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaa 7051172  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||| ||| ||||  || | ||||| |||||||||  ||||||||||||||||||    
T  7051173 gaggttaacagtacacgtcacctccgttaacagaccaacttaatggagggactaatttagtggatattttataaattcgagtactaaatagatatttcgc 7051272  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| |  |||||||| |  |||||||| |||||||||   ||||||| |||||||||||    
T  7051273 aaaattcagagacgaatttgactgattttttaaaattcaaattcgaatttaaggtattagtc 7051334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 69 - 364
Target Start/End: Original strand, 32518291 - 32518587
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  |    
T  32518291 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccct 32518390  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||    
T  32518391 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacattacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgaca 32518490  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||| ||| | ||  ||||||| |||||||||| |||||||||||||||||||||    
T  32518491 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtct 32518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 103 - 364
Target Start/End: Original strand, 11357024 - 11357284
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||||||| || || |||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  11357024 caattttctgaaattccatcaatttggtccttggcaattttctgtaaatcaatcaatttggtctctgcttgcgtgacatctgacgtggtaagccttgtaa 11357123  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||  ||||||||||||||||||||||||||| ||||||||||   |||||||||||||||   |||||||| | |||||  |    
T  11357124 gaggttaacgttacacgtca--tccgttaacagaccaacttaacggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttc 11357221  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||| | ||||||||| |   ||||||| |||||||||| |||||||||| ||||||||||    
T  11357222 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtct 11357284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 20525158 - 20525423
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    |||||||||||||||||||| || |||||| || |||||||| ||||||||||||||||||||||||  ||||||  || ||| ||||||||||||||||    
T  20525158 ttgacaattttctgaaaatccatcaatttggtcattggcaatgttctgtaaatcaatcaatttggtccctgcttgtgtggcatctgacgtggtaagcctt 20525257  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  | || ||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||| | ||| |||||| ||||    
T  20525258 gtaagaggttaacgttgcatgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatt 20525357  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    | |||||||| | ||| ||||| |    |||||| |||||||||  ||||||||||||||||||||    
T  20525358 ttgcaaaattcagggatgaatttgacctatttttaaaaattcaaagacgaatttgaggtattagtc 20525423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 103 - 377
Target Start/End: Complemental strand, 21091355 - 21091092
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtc-atgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| ||||||||||| |||||| |||||| ||||||||| ||||||||||||||| ||| |||||||| |||||| ||||||||||||||||||||    
T  21091355 caattttatgaaaatcaatcaatttggtccttgacaattttctataaatcaatcaatttagtccatgcttgcgtgacatctgacgtggtaagccttgtaa 21091256  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||| |||||| |||||||||||||||||||||| ||||||||| ||||| |||||||||||  ||||||| ||||||||  ||||||||||||||||||     
T  21091255 gagattaacagtacacgtcacctccgttaacaggccaacttaatggagggactgatttgattgacattttataaattcggggactaaatagatatttcgt 21091156  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaaaatattga 377  Q
      |||||            |||||||||||||||||||||| ||||||||||||||||| || | ||||| |||||    
T  21091155 gtaattt------------ggttgatttttgaaaattcaaggacgaatttgaggtattactcgactaaaaaattga 21091092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 69 - 364
Target Start/End: Original strand, 18644898 - 18645193
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||| ||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| |||||||| |||| |||||||  |    
T  18644898 caattttatgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcgatcagtttggtccct 18644997  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| | ||||||||||  |||| ||||||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||  |||    
T  18644998 gcttgcgtgacatctaacgtggtaagttttgtcagaggttaacgttacatgtcacctccgttaacagaccaacttaacggagggactgatttgattgaca 18645097  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||   |||||| | |||||||||||||||| |  |||||||| |   ||||||| |||||||||| |||||||||||||||||||||    
T  18645098 ttttgtaaattcatggactaatttgatatttcgcaaaattcagagacgaatt-gtccgatttttcaaaattcaaggacgaatttgaggtattagtct 18645193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 137 - 346
Target Start/End: Complemental strand, 33267288 - 33267078
Alignment:
Q  137 caattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacaga 235  Q
    ||||||| |||||||||||||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  33267288 caattttgtgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaagaggttaacactacacgtcacctccgttaacagg 33267189  T
Q  236 ccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaa 335  Q
    |||| |||||||| | |||||||||||  ||||||| ||||||||   ||||||||||||||||||||||||| || ||||||| | || |||||| |||    
T  33267188 ccaatttaacggaaggactgatttgattgacattttataaattcgggaactaaatagatatttcgcaaaatttgagaacgaatttgattaatttttaaaa 33267089  T
Q  336 attcaagaacg 346  Q
    || ||||||||    
T  33267088 atacaagaacg 33267078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 13610941 - 13610690
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcatgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    |||||||||||||||| || |||||| ||||||| |||||| |||||||||||     ||||   | |||| || ||| |||||||||||||||||||||    
T  13610941 caattttctgaaaatccatcaatttggtccttggaaattttttgtaaatcaat-----tggt---gtttgcgtgtcatctgacgtggtaagccttgtaag 13610850  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgat-gactaaatagatatttcgc 301  Q
     |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||  || |||||| | ||||||||||    
T  13610849 gggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaatt--atggactaatttgatatttcgc 13610752  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||| |||| | | ||||||| |||||||||| |||||||| |||||||||||    
T  13610751 aaaattcagggacaaatttgatcgatttttcaaaattcaaggacgaatttaaggtattagtc 13610690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 32454542 - 32454248
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||  ||||||||| ||||||  |||||| || ||||| ||  ||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  32454542 caattttctgaaaattcatcaatttggtccttgg-aattttgtgtaaatctatcgatttcgtccttcgaaattttgtgtaaatcaatcagtttggtctct 32454444  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  |||    
T  32454443 gcttgcgtggcatctgacgtggtaagctttgttagaggttaacgtgacacgtcacctccgttaacagaccaaattaacggagggactaatttgattgaca 32454344  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||| |||||| ||||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  32454343 ttttgtaaattcagggactaatttgatatttcgaaaaattcaaggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 32454248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 3480452 - 3480746
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  3480452 caattttctgaaaatccatcaatttggtccttgg-aattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 3480550  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| |||| |||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  |||    
T  3480551 gcttgcgtggcatctgacgtggtaagctttgtcagagattaacgtgacacgtcacctccgttaacagaccaaattaacggagggactaatttgattgaca 3480650  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||  | ||||||||| |||||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  3480651 ttttgtaaattcagggactagtttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 3480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 133 - 363
Target Start/End: Complemental strand, 7371406 - 7371175
Alignment:
Q  133 ttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaa 231  Q
    |||||||||||| | ||||| ||||||||||||  ||||||| ||  || |||||||||||| ||| |||||||||||   |||||||||||||| ||||    
T  7371406 ttggcaattttcggaaaatccatcaatttggtccctgcttgcgtggtatctgacgtggtaagtcttataagaggttaatgttacacgtcacctcctttaa 7371307  T
Q  232 cagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgattttt 331  Q
    ||||||||||||| ||||| |||||||||||  ||||||| ||||||| | ||| |||||  |||||||||||||| | |||| |||| ||  |||||||    
T  7371306 cagaccaacttaaaggagggactgatttgattgacattttataaattcaaggacaaaatatctatttcgcaaaattcagggaccaatttggccgattttt 7371207  T
Q  332 gaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||| ||||| ||||||||||||||    
T  7371206 gaaaattcaaggacgaagttgaggtattagtc 7371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7051005 - 7051132
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaaaaggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttcctt 100  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||| || |||||| |||||||||||||||||| ||||||||||||||||||||    
T  7051005 attgaagctctctcacatcatcattttacatagagcttgaagaggagaaatagccgttgggaattttgcaattttctgaaaatcaatcaatttgttcctt 7051104  T
Q  101 gacaattttctgaaaatcaattaatttg 128  Q
    | |||||||||| |||||||| ||||||    
T  7051105 ggcaattttctgtaaatcaatcaatttg 7051132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 69 - 279
Target Start/End: Complemental strand, 32437422 - 32437211
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||| ||| |||||| || ||||| || |||||| |||| || ||| || ||||||||||||| |||||||  |    
T  32437422 caattttctgaaaatccatcaatttggtccgtgaaaattttgtgtaaatccatcaatttggtcctcggaaatgttgtgtaaatcaatcagtttggtccct 32437323  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| ||  || ||||||||||||| |||| ||||||||||  ||||||||| ||||||||||| |||||||||||||||| | |||||||||   ||    
T  32437322 gcttgcgtggtatctgacgtggtaagctttgtcagaggttaacgttacacgtcatctccgttaacataccaacttaacggagggattgatttgattggca 32437223  T
Q  268 ttttgtaaattc 279  Q
    ||||||||||||    
T  32437222 ttttgtaaattc 32437211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 103 - 359
Target Start/End: Complemental strand, 33277053 - 33276805
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcatgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    ||||||||||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||  ||   | |||||| ||||||||| || ||| ||||    
T  33277053 caattttctgaaaatcaatcaatttgatcctttacaattttctataaatcaatcaatttggtc--gcaaacgtgacatctgacgtggtcagtcttataag 33276956  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgca 302  Q
    || |||||| |||| ||||||||||||||||   |||    ||||||| |||||||||||  ||||||| |||||||     ||||||||||||||||||    
T  33276955 agattaacagtacatgtcacctccgttaacatgtcaa---tacggaggaactgatttgattgacattttataaattc---agctaaatagatatttcgca 33276862  T
Q  303 aaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatt 359  Q
    |||||||   ||||||| |  |||||||| |||||||||| ||||| ||||| ||||    
T  33276861 aaatttagaaacgaatttgactgattttttaaaattcaaggacgaagttgagttatt 33276805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 167 - 342
Target Start/End: Complemental strand, 14337861 - 14337687
Alignment:
Q  167 tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaac 266  Q
    ||||||| |||||| |||| |||||||| |||||||||||||| | |||| |||||||| |||||||| ||||||||| ||||| |||||||||||  |     
T  14337861 tgcttgcgtgacatctgacatggtaagc-ttgtaagaggttaatagtacatgtcacctctgttaacaggccaacttaatggagggactgatttgattgat 14337763  T
Q  267 attttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaag 342  Q
    ||||||||||||||   |  || |||| |||| ||||||||| ||||  |||| || |||||||  ||||||||||    
T  14337762 attttgtaaattcgggaatgaattagacattttgcaaaatttgaggataaatttggctgattttaaaaaattcaag 14337687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 6902703 - 6902785
Alignment:
Q  46 agaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||||||  ||||||||||||||||| |||||||| ||||||    
T  6902703 agaaagagtcgttgggaattttgtaattttctgaaaatcaatcaatttagtccttgacaattttctgtaaatcaatcaatttg 6902785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 21091379 - 21091297
Alignment:
Q  45 gagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaattt 127  Q
    ||||||||| ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||  |||||||| |||||    
T  21091379 gagaaagagccgttggaaattttgcaattttatgaaaatcaatcaatttggtccttgacaattttctataaatcaatcaattt 21091297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 8605351 - 8605416
Alignment:
Q  300 gcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||||||| ||||||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  8605351 gcaaaatttagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcta 8605416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 6899565 - 6899485
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||| |||||||||  |||||||| |  ||||||||||||||||||| || |||||||||||||||||    
T  6899565 gactaaatagatatttcacaaaatttagagacgaatttgactgatttttgaaaattcaaggacaaatttgaggtattagtc 6899485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 33277066 - 33276994
Alignment:
Q  56 gttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||  |||||||| ||||||    
T  33277066 gttggaaattttgcaattttctgaaaatcaatcaatttgatcctttacaattttctataaatcaatcaatttg 33276994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 283 - 359
Target Start/End: Complemental strand, 10568479 - 10568403
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatt 359  Q
    ||||||||| ||||||||| ||||| ||||||||||| |  ||||||||||||||||||| |||||||||| |||||    
T  10568479 gactaaataaatatttcgctaaattcaaggacgaatttgactgatttttgaaaattcaaggacgaatttgatgtatt 10568403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 283 - 362
Target Start/End: Complemental strand, 20523446 - 20523367
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    ||||||||||||||||||||||||| ||||||||||| |   ||||||||||||||| || | |||||||| ||||||||    
T  20523446 gactaaatagatatttcgcaaaattcaaggacgaatttgaccgatttttgaaaattctaggaagaatttgatgtattagt 20523367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 9399862 - 9399920
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatt 126  Q
    |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| ||||    
T  9399862 gcaattttctgaaaatcaatcaatttgatccttgacaattttctgtaaatcaatcaatt 9399920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6902396 - 6902436
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6902396 attgaagctctctcacatcatcattgtacatagagcttgaa 6902436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 32439135 - 32439215
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | ||||||||| |   ||||||| |||||||||  || |||||||||||||||||    
T  32439135 gactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaatgactaatttgaggtattagtc 32439215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32454899 - 32454859
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32454899 attgaagctctctcacatcatcattgtacatagagcttgaa 32454859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11356632 - 11356672
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  11356632 attgaagctctctcacctcatcattgtacatagagcttgaa 11356672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 13613626 - 13613706
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||||||| |   ||||||| |||||||||| |||||||| |||||||||||    
T  13613626 gactaatttgatatttcgcaaaattcagggacgaatttgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 13613706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18644658 - 18644698
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  18644658 attgaagctctctcacatcatcattgtacatggagcttgaa 18644698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32437769 - 32437729
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  32437769 attgaagctttctcacatcatcattgtacatagagcttgaa 32437729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33267635 - 33267595
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  33267635 attgaagctctctcacatcatcattgcacatagagcttgaa 33267595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 290 - 348
Target Start/End: Original strand, 14338526 - 14338584
Alignment:
Q  290 tagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaa 348  Q
    |||| |||||||||||||| |||||||||| || |||||||| |||||||||| |||||    
T  14338526 tagacatttcgcaaaatttgaggacgaatttggctgatttttaaaaattcaaggacgaa 14338584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 285 - 363
Target Start/End: Complemental strand, 32516955 - 32516877
Alignment:
Q  285 ctaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||| ||||| | |||||| | ||||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  32516955 ctaaataggtattttgtaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 32516877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 7373002 - 7373079
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||| ||||||||||||||| | ||||||||| |    |||||| |||||||||  |||||||||||||||||    
T  7373002 gactaaataaatatttcgcaaaattcagggacgaatttgaccaatttttaaaaattcaatcacgaatttgaggtatta 7373079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7371721 - 7371681
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  7371721 attgaagctctctcacctcatcattgtacatatagcttgaa 7371681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9399555 - 9399595
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  9399555 attgaagctctctcacatcatcattgaacagagagcttgaa 9399595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 11357023 - 11357083
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| | || ||||||||| |||||| |||||||||| |||||||| ||||||    
T  11357023 gcaattttctgaaattccatcaatttggtccttggcaattttctgtaaatcaatcaatttg 11357083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20524814 - 20524854
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  20524814 attgaagctctctaacctcatcattgtacatagagcttgaa 20524854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 288 - 362
Target Start/End: Complemental strand, 11355297 - 11355223
Alignment:
Q  288 aatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    ||||||||||||  |||||| |  |||||||| |   ||||||| |||||||||| |||||||||||||||||||    
T  11355297 aatagatatttcataaaattcagtgacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 11355223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 359
Target Start/End: Complemental strand, 7049847 - 7049790
Alignment:
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatt 359  Q
    |||||| | ||||||||| || ||||||||||||||||||| | ||||||||| ||||    
T  7049847 aaaattcagggacgaatttggctgatttttgaaaattcaaggaagaatttgagatatt 7049790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 14337926 - 14337898
Alignment:
Q  137 caattttctgtaaatcaatcaatttggtc 165  Q
    |||||||||||||||||||||||||||||    
T  14337926 caattttctgtaaatcaatcaatttggtc 14337898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 32437208 - 32437140
Alignment:
Q  295 atttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||| | ||||||| | ||  ||||||| |||||||||  || |||||||||||||||||    
T  32437208 atttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacaaatttgaggtattagtc 32437140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 228; Significance: 1e-125; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 19581777 - 19581410
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaaaaggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttcctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||  |||||||||||||||||| ||||||| |||||| |||||    
T  19581777 attgaagctctctcacatcatcattgtacatagagcttgaagaggagaaagagccgttgtgaattttgcaattttctgaaaatcaataaatttggtcctt 19581678  T
Q  101 gacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggt-catgcttgcatgacatatgacgtggtaagccttgt 199  Q
    | ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||| ||||||||||||||||||    
T  19581677 ggcaattttctgaaaatcaatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatttgacgtggtaagccttgt 19581578  T
Q  200 aagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttc 299  Q
    |||| ||||| | |||| |||||||||||||||| || |||||||||||   |||||||||||| |||||| |||||||||| |||||||||||||||||    
T  19581577 aagaagttaatagtacatgtcacctccgttaacatacaaacttaacggaaagactgatttgatggacatttggtaaattcgaggactaaatagatatttc 19581478  T
Q  300 gcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctatt 367  Q
    |||||||| | |||| |||| || |||||||| |||||| ||| ||||||||||||||||||||||||    
T  19581477 gcaaaattcagggacaaatttggctgatttttaaaaatttaaggacgaatttgaggtattagtctatt 19581410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 99 - 360
Target Start/End: Complemental strand, 19906947 - 19906685
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    |||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||  || |||| || ||| |||||||||||||| |    
T  19906947 ttgacaattttctgaaaatccatcaatttggtccttggcaattttatgtaaatcaatcaatttggtccctgtttgcgtggcatctgacgtggtaagccat 19906848  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||||  ||||||||||||||    |||||||||||||||    
T  19906847 gtaagaggttaacgttacacgtcacctcggttaacagaccaacttaacggagggactgatttgattgacattttgtaaattatgggactaaatagatatt 19906748  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||||||| | ||||||||| |   ||||||| |||||||||| |||||||| ||||||||    
T  19906747 tcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttaaggtatta 19906685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 16377001 - 16376736
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    |||||||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  16377001 ttgacaattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatatgacgtggtaagcctt 16376902  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  || | || ||||| ||||| |||||||||||||||||| |||||||||||  | |||||||||||||   |||||||||| ||||    
T  16376901 gtaagaggttaacgttaaatgttacctctgttaatagaccaacttaacggagggactgatttgattgatattttgtaaattcagggactaaatagctatt 16376802  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||| |||||| | ||||||||| |   ||||||| |||||||||  ||||||||||||||||||||    
T  16376801 tcgtaaaattcagggacgaatttgaccgattttttaaaattcaaagacgaatttgaggtattagtc 16376736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 39663413 - 39663154
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| |||||||| || |||||| |||||||||||| |  ||||||||||||||||| ||  ||||||| |||||| |||||||||||||| |||||    
T  39663413 caattttatgaaaatccatcaatttggtccttggcaattat--gtaaatcaatcaatttgatccctgcttgcgtgacatctgacgtggtaagccatgtaa 39663316  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||||||| ||||| ||    
T  39663315 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagctattttgc 39663216  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||||| |   ||||||| |||||||||| |||||||| |||||||||||    
T  39663215 aaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaattttaggtattagtc 39663154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 39456608 - 39456869
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||  |||||| ||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  39456608 caattttctgaaaatccatcaatttagtccttgacaattttctataaatcaatcaatttggtccctgcttgcgtgacatatgacgtggtaagccttgtaa 39456707  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||||||||   |||||||||||||||||||||||||||||||||||| | |||||||||||  ||||||| |||||||   |||||||||| ||||| ||    
T  39456708 gaggttaatgttacacgtcacctccgttaacagaccaacttaacggatggactgatttgattgacattttataaattcagggactaaatagctattttgc 39456807  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||      |||||| |||||||||| | |||||||| |||||||||    
T  39456808 aaaattcatggacgaatttaaccaattttttaaaattcaaggatgaatttgaagtattagtc 39456869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 34400573 - 34400314
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcatgcttgcatgacatatgacgtggtaagccttg 198  Q
    |||||||||||||||||| | || |||||| |||||| || ||||||||||||||||||||||||||      || |||||| |||||||||||| ||||    
T  34400573 ttgacaattttctgaaaaaccatcaatttggtccttgacatttttctgtaaatcaatcaatttggtcg-----gcgtgacatctgacgtggtaagtcttg 34400479  T
Q  199 taagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatattt 298  Q
    |||||||| |||| ||||  |||||||||||||||||||||||||||||||| || ||||||||  | ||||||||||||| | ||| |||||| |||||    
T  34400478 taagaggtcaacattacatatcacctccgttaacagaccaacttaacggagggaccgatttgattgatattttgtaaattcaaggacaaaatagctattt 34400379  T
Q  299 cgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||| | ||| ||||| ||  |||||||||||||||||| | ||||||||||||||||||    
T  34400378 cgcaaaattcagggatgaatttggccgatttttgaaaattcaaggatgaatttgaggtattagtc 34400314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 99 - 360
Target Start/End: Original strand, 6799231 - 6799494
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    ||||||||||| |||||||| || |||||| |||||||||||||||| |||||||||||| ||||||  | ||||| || ||| || |||||||||||||    
T  6799231 ttgacaattttttgaaaatccatcaatttggtccttggcaattttctctaaatcaatcaacttggtccctacttgcgtggcatctggcgtggtaagcctt 6799330  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttga-tgaacattttgtaaattcgatgactaaatagatat 296  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||| ||||||| | ||| |||||| |||    
T  6799331 gtaagaggttaacgttacacgtcaccaccgttaacagaccaacttaacggagggactgatttgattgaaaattttataaattcaaggacaaaatagctat 6799430  T
Q  297 ttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    || |||||||| | ||||||||| |   ||||||| |||||||||| ||||||||||| |||||    
T  6799431 ttggcaaaattcatggacgaatttgtccgatttttaaaaattcaaggacgaatttgagatatta 6799494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 16764406 - 16764700
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| |||||   |||||| || ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  |    
T  16764406 caattttctgaaaatccatcaatttggtccttagaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtctct 16764505  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| |||| |||||||| |||| ||||||||||  |||||||||||||||||||||||| ||||||||||||| |||| ||||||  |||    
T  16764506 gcttgcgtgacatctgacatggtaagctttgtcagaggttaacgttacacgtcacctccgttaacagac-aacttaacggagggactggtttgattgaca 16764604  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||  ||||| | |||||||||| ||||||||||||||||||||    
T  16764605 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttgaggtattagtc 16764700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 103 - 306
Target Start/End: Complemental strand, 42517818 - 42517614
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||||||  ||||||| || ||| |||||||||||||||||||     
T  42517818 caattttctgaaaatccatcaatttgctccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtat 42517719  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||||| | ||| |||||| |||||||     
T  42517718 gaggttaacgttacacgtcacctccgttaacagaccaacttaacgaagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgt 42517619  T
Q  302 aaaat 306  Q
    |||||    
T  42517618 aaaat 42517614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 71 - 363
Target Start/End: Complemental strand, 24205891 - 24205598
Alignment:
Q  71 attttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgc 169  Q
    ||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |||    
T  24205891 attttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctgc 24205792  T
Q  170 ttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacatt 269  Q
    ||||||| ||| ||||||||||||| |||| ||||||||||   |||||||||||||||||||||||||||| |||||||| ||| |||||||  |||||    
T  24205791 ttgcatggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaactgaacggagggactaatttgattgacatt 24205692  T
Q  270 ttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||   |||||| | ||||||||| |||||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  24205691 ttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 24205598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 40561706 - 40561967
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||| ||| || |||||||||||||||||||||  ||||||| || ||| ||||||||||||| |||| |    
T  40561706 caattttctgaaaatccatcaatttggtccttggaaatgttgtgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagctttgtca 40561805  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||| || ||||||||  |||||||||||||||   |||||| | | |||||| |    
T  40561806 gaggttaacgttacacgtcacctccgttaacaaaccaacttaacggagggaccgatttgattgacattttgtaaattcagggactaatttgctatttcac 40561905  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| |  |||||| | ||  ||||||| |||||||||  ||||||||||||||||||||    
T  40561906 aaaattcagagacgaaattggccgatttttcaaaattcaaagacgaatttgaggtattagtc 40561967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 69 - 365
Target Start/End: Complemental strand, 14387644 - 14387347
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  ||||||    ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  |    
T  14387644 caattttctgaaaatccatcaatttggtccttggaaattttgcctaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccct 14387545  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||  |||||||||||| | ||||||| | || |||||||||| ||| |||||||  |||    
T  14387544 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacacgtcaccttctttaacagtctaatttaacggagggacttatttgattgaca 14387445  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||||    
T  14387444 ttttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 14387347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 167 - 360
Target Start/End: Original strand, 37646371 - 37646564
Alignment:
Q  167 tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaac 266  Q
    ||||||| |||||| ||||||||||||||||||||| |||||||| |||| ||||| ||||||||||| |||||||||| |||| |||||||||||   |    
T  37646371 tgcttgcgtgacatctgacgtggtaagccttgtaagcggttaacagtacatgtcacgtccgttaacaggccaacttaacagagggactgatttgattggc 37646470  T
Q  267 attttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||| ||||||   |||||||||||||||||||| ||||| |||||||||| |  |||||||||||| |||||||||||| ||| |||||||    
T  37646471 attttgaaaattcagggactaaatagatatttcgcagaatttgaggacgaatttgactgatttttgaaagttcaagaacgaagttggggtatta 37646564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 2577275 - 2577569
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||| | |||||||  |    
T  2577275 caattttctgaaaatccatcaatttggtccttgg-aattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaattagtttggtccct 2577373  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||   |||||||||||| ||||||||||||| |||||||||| ||| |||||||  |||    
T  2577374 gcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctctgttaacagaccaaattaacggagggactaatttgattgaca 2577473  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||  |||||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  2577474 ttttgtaaattcagggactaatttgatatttcaaaaaattcagggacgaaattggacgatttttcaaaattcaaggactattttgaggtattagtc 2577569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 70 - 363
Target Start/End: Original strand, 37021981 - 37022274
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||| ||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  |||||   |||||| ||||||||||||| |||||||  ||    
T  37021981 aattttgtgaaaatccatcaatttggtccttgg-aattttgtgtaaatccatcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccctg 37022079  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||| ||||||||| |||||| |||||||||| ||| |||||||  ||||    
T  37022080 cttgcgtgtcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacttccgttaacggaccaaattaacggagggactaatttgattgacat 37022179  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||| | ||||||||| |||||| | ||||||| | ||| ||||||| |||||||||| || | |||||||||||||||    
T  37022180 tttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggtcgatttttcaaaattcaaggactattttgaggtattagtc 37022274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 99 - 305
Target Start/End: Original strand, 17697933 - 17698140
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    |||||||||||||||||||| || |||||| |||||| |||||||| |||||  ||| |||||||||  ||||||| |||||| | |||||||||| |||    
T  17697933 ttgacaattttctgaaaatccatcaatttggtccttgacaattttcagtaaactaattaatttggtccctgcttgcgtgacatctaacgtggtaagtctt 17698032  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
     |||||| |||||  ||||||||||||||||||| | | |||||||||||||  |||||||||||  ||||||||||||||| | ||| |||||| ||||    
T  17698033 ttaagagattaacgttacacgtcacctccgttaatatatcaacttaacggagagactgatttgattgacattttgtaaattcaaggacaaaatagctatt 17698132  T
Q  298 tcgcaaaa 305  Q
    ||| ||||    
T  17698133 tcggaaaa 17698140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 164 - 360
Target Start/End: Original strand, 31474969 - 31475166
Alignment:
Q  164 tcatgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatg 263  Q
    |||||||||| |||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||   ||||||||| |||| || ||||||||     
T  31474969 tcatgcttgcgtgacatctgacgtggtaagcattgtaagcggttaacagtacacgtcacctccgttaacatgtcaacttaacagagggaccgatttgatt 31475068  T
Q  264 aaca-ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
     ||| ||||| ||||||   || |||||||||||||| ||||||||   |||||||| |  ||||||||||||||| ||||||||| |||||||||||    
T  31475069 gacatttttgaaaattcagggattaaatagatatttctcaaaatttggtgacgaatttgactgatttttgaaaattaaagaacgaagttgaggtatta 31475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 145 - 363
Target Start/End: Complemental strand, 6783583 - 6783364
Alignment:
Q  145 tgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaactta 243  Q
    ||||||||||||| |||||||  ||||||| |||||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||    
T  6783583 tgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaactta 6783484  T
Q  244 acggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaaga 343  Q
    ||||||| | | |||||||  |||||||||||||||   |||||| | ||||||| | | |||| | ||||||| | |   ||||||| ||||||||||     
T  6783483 acggagggaataatttgattgacattttgtaaattcagggactaatttgatattttgaataattcagggacgaaattgaccgattttttaaaattcaagg 6783384  T
Q  344 acgaatttgaggtattagtc 363  Q
    || | |||||||||||||||    
T  6783383 actattttgaggtattagtc 6783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 167 - 360
Target Start/End: Original strand, 161968 - 162160
Alignment:
Q  167 tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaac 266  Q
    ||||||| |||||| |||||||||||| |||||||| |||||||  |||| |||||||||||||| |||||||||||||||| | |  ||||||||  ||    
T  161968 tgcttgcgtgacatctgacgtggtaagtcttgtaagcggttaacggtacatgtcacctccgttaatagaccaacttaacggatggatcgatttgattgac 162067  T
Q  267 attttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
     ||||| |||||| |  ||||||||||||||| | |||||||  || |||||| |  ||||||||||||||||||| ||||| |||| ||||||    
T  162068 gttttgaaaattcaagaactaaatagatattttgtaaaatttggggtcgaatttgactgatttttgaaaattcaag-acgaaattgaagtatta 162160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 14389122 - 14389228
Alignment:
Q  257 tttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggt 356  Q
    ||||||| |||||| | ||||||   ||||||||||||||||||||||||| | ||||||||| ||  |||||||||||||||||  |||||||||||||    
T  14389122 tttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatgacgaatttgaggt 14389221  T
Q  357 attagtc 363  Q
    |||||||    
T  14389222 attagtc 14389228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 283 - 372
Target Start/End: Complemental strand, 40560303 - 40560214
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaaaat 372  Q
    ||||||||||||||||||||||||| | ||||||||| || |||||||| |||||||||  |||||||||| ||||||||| || |||||    
T  40560303 gactaaatagatatttcgcaaaattcagggacgaatttggctgattttttaaaattcaaagacgaatttgaagtattagtcaatgaaaat 40560214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 16763156 - 16763076
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | ||||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  16763156 gactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcaaggacgaatttgaggtattagtc 16763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 365
Target Start/End: Complemental strand, 37645576 - 37645485
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||| | |||||||||||||||||  ||||||||||||||||||||  |||||||| |||||||||| ||||| ||| ||||||| ||||    
T  37645576 aaattcaaggactaaatagatatttcctaaaatttaaggacgaattcgactgatttttaaaaattcaaggacgaagttggggtattactcta 37645485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 2767014 - 2766934
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| |||||||| || |   ||||||| |||||||||| ||||||||||| ||||||||    
T  2767014 gactaaatagatatttcgcaaaattcaaggacgagtttgaccgatttttaaaaattcaaggacgaatttgagctattagtc 2766934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 274 - 365
Target Start/End: Original strand, 19908301 - 19908393
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttg-aaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||| | ||||||||||||||||||||||||| | |||| |||| ||  |||||||  |||||||||| ||||||||||||||||||||||    
T  19908301 aaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgatttttttaaaattcaaggacgaatttgaggtattagtcta 19908393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 39664812 - 39664892
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||||||||| ||||||   ||||||||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  39664812 gactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 39664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 365
Target Start/End: Complemental strand, 17696286 - 17696204
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    ||||||||||||||||  ||||||| | ||| ||||| ||  |||||||||||||||||| ||||||||||||||||| ||||    
T  17696286 gactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattaatcta 17696204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 44709809 - 44709895
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaa 369  Q
    |||||||||| |||||||||||||| | || |||||| ||  | ||||| |||||||||| |||||||||||||||||||| |||||    
T  44709809 gactaaatagttatttcgcaaaattcagggccgaatttggccggttttttaaaattcaaggacgaatttgaggtattagtcaattaa 44709895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6783975 - 6783935
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6783975 attgaagctctctcacatcatcattgtacatagagcttgaa 6783935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24206220 - 24206180
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24206220 attgaagctctctcacatcatcattgtacatagagcttgaa 24206180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 42517819 - 42517759
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||    
T  42517819 gcaattttctgaaaatccatcaatttgctccttgacaattttctgtaaatcaatcaatttg 42517759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 16376997 - 16376938
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||    
T  16376997 caattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttg 16376938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2768320 - 2768360
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  2768320 attgaagctctctcacctcatcattgtacatagagcttgaa 2768360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17697613 - 17697653
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  17697613 attgaagctctctcacctcatcattgtacatagagcttgaa 17697653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34400920 - 34400880
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  34400920 attgaagctctctcacctcatcattgtacatagagcttgaa 34400880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37021624 - 37021664
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  37021624 attgaagctctcccacatcatcattgtacatagagcttgaa 37021664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 40561356 - 40561392
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagct 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  40561356 attgaagctctctcacatcatcattgtacatagagct 40561392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 6783649 - 6783592
Alignment:
Q  104 aattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaattt 161  Q
    ||||||||||||||| || |||||| ||||||| |||||| |||||||| ||||||||    
T  6783649 aattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaattt 6783592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 42519269 - 42519346
Alignment:
Q  283 gactaaatagatatttcgcaaaattt-aaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatt 359  Q
    |||||||||||||||| |||||| || |||||| |||| | |  |||||| |||||||||| ||||||||||||||||    
T  42519269 gactaaatagatattttgcaaaaattcaaggactaatttgatcaattttttaaaattcaaggacgaatttgaggtatt 42519346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 39456607 - 39456667
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||  ||||||||||||||||  |||||||| ||||||    
T  39456607 gcaattttctgaaaatccatcaatttagtccttgacaattttctataaatcaatcaatttg 39456667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39663752 - 39663712
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  39663752 attgaagctctctcacctcatcgttgtacatagagcttgaa 39663712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 42518163 - 42518127
Alignment:
Q  5 aagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||| ||||||||||||||||||||||||    
T  42518163 aagctctctcacctcatcattgtacatagagcttgaa 42518127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 17697937 - 17697996
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||| |||| ||||||||| ||||||||||||||| | |||  ||||||||||    
T  17697937 caattttctgaaaatccatcaatttggtccttgacaattttcagtaaactaattaatttg 17697996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 19906943 - 19906884
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||| |||| ||||||||| |||||| ||||||| || |||||||| ||||||    
T  19906943 caattttctgaaaatccatcaatttggtccttggcaattttatgtaaatcaatcaatttg 19906884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 34400569 - 34400510
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||| || | ||||||||| ||||||||| ||||||| |||||||| ||||||    
T  34400569 caattttctgaaaaaccatcaatttggtccttgacatttttctgtaaatcaatcaatttg 34400510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 31474893 - 31474939
Alignment:
Q  55 cgttggaaattttgcaattttctgataatcaatcaatttgttccttg 101  Q
    |||||| |||||||||||||||||  |||||||||||||| ||||||    
T  31474893 cgttgggaattttgcaattttctgtaaatcaatcaatttggtccttg 31474939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 42517596 - 42517558
Alignment:
Q  325 gatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  42517596 gatttttaaaaattcaaggacgaatttgaggtattagtc 42517558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 161902 - 161931
Alignment:
Q  136 gcaattttctgtaaatcaatcaatttggtc 165  Q
    ||||||||||||||||||||||||||||||    
T  161902 gcaattttctgtaaatcaatcaatttggtc 161931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6798912 - 6798949
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagctt 38  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  6798912 attgaagctctctcacctcatcattgtacacagagctt 6798949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 31474906 - 31474935
Alignment:
Q  136 gcaattttctgtaaatcaatcaatttggtc 165  Q
    ||||||||||||||||||||||||||||||    
T  31474906 gcaattttctgtaaatcaatcaatttggtc 31474935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 37646293 - 37646346
Alignment:
Q  56 gttggaaattttgcaattttctgataatcaatcaatttgttccttgacaatttt 109  Q
    ||||| |||||||||||||||||  |||||||||||||  ||||||| ||||||    
T  37646293 gttgggaattttgcaattttctgtaaatcaatcaattttgtccttgataatttt 37646346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 6797587 - 6797507
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | | |||||||  |   |||||| |||||||||  | |||||| |||||||||||    
T  6797587 gactaaatagatatttcgcaaaattcaggaacgaatttagccaattttttaaaattcaaatatgaatttaaggtattagtc 6797507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 48829721 - 48829356
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaaaaggagaaa--gagtcgttggaaattttgcaattttctgataatcaatcaatttgttcc 98  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  48829721 attgaagctctttcacatcatcattgtacatagagcttgaagaggagaaaaagagccgttgggaattttgcaattttctgaaaatcaatcaatttgttcc 48829622  T
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcat-gcttgcatgacatatgacgtggtaagcctt 197  Q
    ||||||||||||| ||||||| | |||||| |||||| ||||||||||||||||||||||||||||| | |||||| |||| | ||||||||||||||||    
T  48829621 ttgacaattttctaaaaatcattcaatttggtccttgacaattttctgtaaatcaatcaatttggtccttgcttgcgtgacctctgacgtggtaagcctt 48829522  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| ||| |||||||||||||||    
T  48829521 gtaagaggttaacagtacacttcacctccgttaacagaccaacttaaccgagggactgatttgatggacattttgtaaatccgaggactaaatagatatt 48829422  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||| | | |  |||| || ||| ||||||||||||||| ||||||||||||||||||||    
T  48829421 tcgcaaaattcaggaataaatttggctgaattttgaaaattcaaggacgaatttgaggtattagtc 48829356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 43 - 363
Target Start/End: Original strand, 51686162 - 51686483
Alignment:
Q  43 aggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattt 142  Q
    ||||||||| || ||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| || |||||| |||||||||||||    
T  51686162 aggagaaagggtagttgggaattttgcaattttctgaaaatcaatcaatttgttccttggcaattttctgaaaatcgatcaatttggtccttggcaattt 51686261  T
Q  143 tctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaact 241  Q
    |||||||||||||||||||||||  ||||||| |||||| ||||||||||||| |||||||||||||||  |||||||||||| |||||||| |||||||    
T  51686262 tctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagctttgtaagaggttaacggtacacgtcaccttcgttaacataccaact 51686361  T
Q  242 taacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaa 341  Q
    | || |||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||| || ||||||||||||||| ||    
T  51686362 tgacagagggactgatttgatgaacattttgtaaattcgaggactaaataaatatttcgcaaaatttagggacgaatttggctgatttttgaaaatttaa 51686461  T
Q  342 gaacgaatttgaggtattagtc 363  Q
    | ||||||||||||||||||||    
T  51686462 ggacgaatttgaggtattagtc 51686483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 45 - 366
Target Start/End: Original strand, 610992 - 611314
Alignment:
Q  45 gagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttc 144  Q
    |||||||| ||||||  |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || |||||  |||||||||||||||    
T  610992 gagaaagaatcgttgagaattttgcaattttctgaaaatcaatcaatttggtccttgacaattttctgaaaatccatcaatttagtccttggcaattttc 611091  T
Q  145 tgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaactta 243  Q
    |||||||||||||||||| ||  ||||||| || ||| | ||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  611092 tgtaaatcaatcaatttgatccctgcttgcgtggcatctaacgtggtaaaccttgtaagaggttaacgttacacgtcacctccgttaacagaccaactta 611191  T
Q  244 acggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaaga 343  Q
    ||||||| ||| |||||||  |||||||||||||||   | |||||||| ||||||| |||||| | ||||||||| || |||||||| ||||||||||     
T  611192 acggagggactaatttgattgacattttgtaaattcaggggctaaatagctatttcgaaaaattcagggacgaatttggctgattttttaaaattcaagg 611291  T
Q  344 acgaatttgaggtattagtctat 366  Q
    |||||||||||||||||||||||    
T  611292 acgaatttgaggtattagtctat 611314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 43 - 363
Target Start/End: Original strand, 46113873 - 46114195
Alignment:
Q  43 aggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattt 142  Q
    |||||||||||||||||  |||||| ||||||||||| |||||||||||||| |||||| |||| ||||||||||| || |||||  |||||| ||||||    
T  46113873 aggagaaagagtcgttgagaattttacaattttctgaaaatcaatcaatttggtccttggcaatattctgaaaatccatcaatttagtccttgacaattt 46113972  T
Q  143 tctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaact 241  Q
    |||||||||||||||||||||||  ||||||| || ||| |||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  46113973 tctgtaaatcaatcaatttggtctctgcttgcgtggcatctgacatggtaaaccttgtaagaggttaacgttacacgtcacctccgttaacagaccaact 46114072  T
Q  242 taacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttga-tttttgaaaattca 340  Q
    ||||||||  |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||| ||  || ||||| ||||||||    
T  46114073 taacggagtgactgatttgattgacattttgtaaattcaatgactaaatagatatttcgcaaaattcaaggacaaatttggccgatttttttaaaattca 46114172  T
Q  341 agaacgaatttgaggtattagtc 363  Q
    || |  ||||||||||| |||||    
T  46114173 aggataaatttgaggtagtagtc 46114195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 103 - 360
Target Start/End: Original strand, 42282301 - 42282559
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||| |||| |||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||| || ||| ||||||||||| ||||||||    
T  42282301 caattttcttaaaaacaatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaaaccttgtaa 42282400  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||| |||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  42282401 gaggttaacggtacatgtcacctcggttaacataccaacttaacggagggactgatttaatgaacattttgtaaattcaaggactaaatagatatttcgc 42282500  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||| |   ||||||| |  ||||||||||||||||||| |||||||||||||||||    
T  42282501 aaaattcagaaacgaatttgactgatttttgaaaattcaaggacgaatttgaggtatta 42282559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 103 - 364
Target Start/End: Complemental strand, 23291830 - 23291569
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||| | ||||||||||||||| |||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  23291830 caattttctgaaaatccatcaatttggtcctcgacaattttctgtaaattaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaa 23291731  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||| || ||||||| ||||||||||||| |||||||||||  |||||||||||||||   |||||||||||||||||||    
T  23291730 gaggttaacgttacacgtcacctctgt-aacagactaacttaacggagggactgatttgattgacattttgtaaattcagagactaaatagatatttcgc 23291632  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||| | ||||||||| ||  ||||||| |||||||||| |||||||| ||||||||||||    
T  23291631 aaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttaaggtattagtct 23291569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 103 - 362
Target Start/End: Original strand, 2378811 - 2379071
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| || ||||||||||||| |||||||||||||||||||  ||||||| |||||| |||||||||||||  |||||    
T  2378811 caattttctgaaaatccatcaatttggtcattggcaattttctttaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagctatgtaa 2378910  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    || ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||| | |||||||||| ||||| ||    
T  2378911 gatgttaacattacacgtcacctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcaaggactaaatagctattttgc 2379010  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    |||||| | ||||||| | |   ||||||| |||||||||| |||||||||||||||||||    
T  2379011 aaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttgaggtattagt 2379071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 103 - 353
Target Start/End: Original strand, 17516801 - 17517052
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||||||  ||||||| || ||| ||||||||||||||||||||    
T  17516801 caattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaa 17516900  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||| | ||| |||||  ||||||||    
T  17516901 gaggttaacgttacacgtcacctccgttaatagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaataactatttcgc 17517000  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttga 353  Q
    |||||| | | ||||||| |   |||||||||||||||||| ||||||||||    
T  17517001 aaaattcatgaacgaatttgaccgatttttgaaaattcaaggacgaatttga 17517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 69 - 358
Target Start/End: Original strand, 2661702 - 2661992
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||||||||| | |||||||  |    
T  2661702 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaattagtttggtccct 2661801  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||  ||||||||||||| |||||||||||||||||| ||||| |||||||||||  |||    
T  2661802 gcttgcatggcatatgacgtggtaagctttgtcagaggttaacgttacacgtcacctctgttaacagaccaacttaatggagggactgatttgattgaca 2661901  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtat 358  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||| ||||||| |||||||||| |||||||||||||||    
T  2661902 ttttgtaaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggtat 2661992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 103 - 366
Target Start/End: Original strand, 21350433 - 21350697
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||  || |||||| | ||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  21350433 caattttctgaaaattcatcaatttggttcttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaa 21350532  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||| |||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||| | ||| |||||| ||||||||    
T  21350533 gaggttaacgttacacgacacctccgttaacataccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgc 21350632  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    |||||| |   ||||||| ||  ||||||  |||| ||| | | |||||||||||||||||||||    
T  21350633 aaaattcagtaacgaatttggccgattttaaaaaaatcacggatgaatttgaggtattagtctat 21350697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 53094067 - 53094362
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||| ||||||||| |||||||| |    
T  53094067 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtgaatcaatcagtttggtcact 53094166  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||||||||| ||| |||||||  |||    
T  53094167 gcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaacggagggactcatttgattgaca 53094266  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  53094267 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 53094362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 99 - 360
Target Start/End: Original strand, 54412371 - 54412633
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    ||||||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||||||||  ||||||| || ||| ||||||||||||| ||    
T  54412371 ttgacaattttatgaaaatccatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagcatt 54412470  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||| ||||||||  ||||||||||||||||||||| |||||||||| ||||| |||||||||||  |||||||||||||||    |||||||||||||     
T  54412471 gtaaaaggttaacgttacacgtcacctccgttaacacaccaacttaatggagggactgatttgattgacattttgtaaattcaggaactaaatagatatc 54412570  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||||||| ||||||||||| |    |||||| |||||||| | ||||||||||| |||||    
T  54412571 tcgcaaaattcaaggacgaatttgaccaattttttaaaattcacggacgaatttgagatatta 54412633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 30598598 - 30598337
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| || ||| |||||||||||||||||||| ||||||||  ||||||| ||  || |||||||| |||||||||||    
T  30598598 caattttctgaaaatccatcaatttggtcattgacaattttctgtaaatcaatctatttggtctctgcttgcgtggtatctgacgtggcaagccttgtaa 30598499  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||| |||||  ||||||||||||||||||||| |||||||||||||||| ||| |||||||  ||||||||||||||| | ||| |||||| ||||||||    
T  30598498 gagtttaacgttacacgtcacctccgttaacataccaacttaacggagggactaatttgattgacattttgtaaattcaaggacaaaatagctatttcgc 30598399  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||| |||| |   |||||||||||||||||| ||||||||||||||||||||    
T  30598398 aaaattcagggacaaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtc 30598337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 69 - 371
Target Start/End: Complemental strand, 3150547 - 3150244
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcat- 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||       
T  3150547 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtctcc 3150448  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||| | |||| ||||||||||  |||||||||| ||||||||||||||||||||| ||||| |||||||||||  |||    
T  3150447 gcttgcgtggcatctgacgtggtaatctttgtcagaggttaacgttacacgtcacatccgttaacagaccaacttaatggagggactgatttgattgaca 3150348  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctatt 367  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | |   ||||||| |||||||||| |||||||||||||||||||||||     
T  3150347 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtctata 3150248  T
Q  368 aaaa 371  Q
    ||||    
T  3150247 aaaa 3150244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 69 - 365
Target Start/End: Original strand, 38193304 - 38193601
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  38193304 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 38193403  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||| ||||||||||||||||||||||||||||||| | |||||||||||  |||    
T  38193404 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacatgtcacctccgttaacagaccaacttaacggatggactgatttgattgaca 38193503  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||||    
T  38193504 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 38193601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 44268242 - 44267981
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||| ||| || || |||||| ||||||||||||||||||||||||| ||||||||||  ||||| | || ||  ||||||||||| |||||||     
T  44268242 caattttctaaaagtccatcaatttggtccttggcaattttctgtaaatcaaccaatttggtccctgcttacgtggcaactgacgtggtaaaccttgtag 44268143  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||  ||||||| ||||||| | ||| |||||| ||||||||    
T  44268142 gaggttaacgttacacgtcacctccgttaacataccaacttaacggagggactgatttgattgacattttataaattcaaggacaaaatagctatttcgc 44268043  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| |  || ||||| ||  |||||||||||||||||| ||||||||||||||||||||    
T  44268042 aaaattcagagatgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 44267981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 69 - 372
Target Start/End: Original strand, 46310230 - 46310534
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  46310230 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 46310329  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||||||||| |||| ||||||  |||    
T  46310330 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaacggagggactggtttgattgaca 46310429  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctatt 367  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | |   ||||||| |||||||||  ||||||||||||||||||||| ||    
T  46310430 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttgaggtattagtctttt 46310529  T
Q  368 aaaat 372  Q
    |||||    
T  46310530 aaaat 46310534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 46309102 - 46308807
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||| | |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  46309102 caattttctaaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 46309003  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||||  |||    
T  46309002 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacaggccaacttaacggagggactgatttgattgaca 46308903  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  46308902 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 46308807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 41979180 - 41979441
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||| |  |||||| ||||||||||||| |||||||  ||||||| || ||| ||||||||||||| |||| |    
T  41979180 caattttctgaaaatccatcaatttggtcctcgaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtca 41979279  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| | |||||||||  | |||||||||||||   |||||| | ||||||||||    
T  41979280 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggattgatttgattgaaattttgtaaattcagggactaatttgatatttcgc 41979379  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  41979380 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 41979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 46609444 - 46609149
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  46609444 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 46609345  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||   ||||||||||||| |||||| |||||||||||| ||| |||||||||||  |||    
T  46609344 gcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccattaacaaaccaacttaacgtagggactgatttgattgaca 46609245  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||| ||||||| | ||||||| | ||  ||||||| |||||||||||||||||||||| ||||||||    
T  46609244 ttttgtaaattcagggactaatttgatatttcacaaaattcagggacgaaattggccgatttttcaaaattcaagaacgaatttgagatattagtc 46609149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 46611097 - 46611392
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcat- 167  Q
    ||||||||| | |||| ||||||||| ||||||| |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| ||||||| |     
T  46611097 caattttctaaaaatccatcaatttggtccttgaaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtcctt 46611196  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    ||||||||| ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||| ||||||||||||||| |||||||||||  |||    
T  46611197 gcttgcatggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacaggccaacttaacggagggactgatttgattgaca 46611296  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||| |||||||   |||||| | |||||||||||||||| | ||||||| | |    |||||| |||||||||| ||||||||||||||||||||    
T  46611297 ttttataaattcagggactaatttgatatttcgcaaaattcagggacgaaattgacaaatttttcaaaattcaaggacgaatttgaggtattagtc 46611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 53188037 - 53187742
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcat- 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||       
T  53188037 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtctcc 53187938  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||| | |||| ||||||||||  |||||||||||||||||| |||| |||||||||||||| |||||||||||  |||    
T  53187937 gcttgcgtggcatctgacgtggtaatctttgtcagaggttaacgttacacgtcacctccgttaccagatcaacttaacggagggactgatttgattgaca 53187838  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | |   ||||||| |||||||||| || |||||||||||||||||    
T  53187837 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttgaggtattagtc 53187742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 7883589 - 7883328
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| |||||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||| || ||| ||||||||||||| |||| |    
T  7883589 caattttttgaaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtca 7883490  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||    ||||| | |||||||| |    
T  7883489 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgaaattttgtaaattcaggaactaatttgatatttcac 7883390  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||| ||||||| | ||  ||||||| |||||||||  ||||| ||||||||||||||    
T  7883389 aaaatttagggacgaaattggccgatttttcaaaattcaaagacgaaattgaggtattagtc 7883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 35904086 - 35903825
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||| || ||| ||| ||||||||| |||| |    
T  35904086 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgatgtggtaagctttgtca 35903987  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||| ||| |||||||  |||||||||||||||   |||||| | ||||||| ||    
T  35903986 gaggttaacgttacacgtcacctccgttaacagaccaacttaatggagggactaatttgattgacattttgtaaattcagggactaatttgatattttgc 35903887  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||| ||| | || |||||||| |||||||||| || |||||||||||||||||    
T  35903886 aaaattcagggatgaaattggctgatttttcaaaattcaaggacaaatttgaggtattagtc 35903825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 54899902 - 54900163
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||| |||||| || |||||| ||||||  |||||| ||||||||||||| |||||||  ||||||| || ||| ||||||||||||| |||| |    
T  54899902 caattttctaaaaatccatcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtctctgcttgcgtggcatttgacgtggtaagctttgtca 54900001  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    || ||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||   ||| || | ||||||||||    
T  54900002 gacgttaacgttacacgtcacctccgttaacataccaacttaacggagggactgatttgattgacattttgtaaattcagggacaaatttgatatttcgc 54900101  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  54900102 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 54900163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 53092918 - 53092623
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| || |||| |||||| ||||||||||||| |||||||  |    
T  53092918 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtcattggaaattttgtgtaaatcaatcagtttggtccct 53092819  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||| | |||| ||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  |||    
T  53092818 gcttgcgtggcatctgacgtggtaaactttgtcagaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgaca 53092719  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||| |||||||   || ||| | |||||||||||||||| | ||||||| | ||   |||||| |||||| ||  ||||||||||||||||||||    
T  53092718 ttttataaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaagacgaatttgaggtattagtc 53092623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 123 - 363
Target Start/End: Complemental strand, 27897391 - 27897151
Alignment:
Q  123 aatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtca 221  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | ||||| |||||| |||||||||||||| ||||||||||||||  |||||||||    
T  27897391 aatttggtccttggcaattttctgtaaatcaatcaatttggtccctacttgcgtgacatctgacgtggtaagccatgtaagaggttaacgttacacgtca 27897292  T
Q  222 cctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcg 321  Q
    |||||||||||| |||||||||||||| | ||| |||||||  | |||||||||||||   |||||||||| || || |||||||| | ||||||||| |    
T  27897291 cctccgttaacaaaccaacttaacggatggactaatttgattgatattttgtaaattcagagactaaatagctaatt-gcaaaattcatggacgaatttg 27897193  T
Q  322 gttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
     |  |||||| |||||| ||||| ||||||||||||||||||    
T  27897192 atccattttttaaaatttaagaaagaatttgaggtattagtc 27897151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 44795684 - 44795979
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||  || |||||| ||||||| |||||| ||||||||||||| |||| ||  |    
T  44795684 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaattcatcaatttggtccttggaaattttgtgtaaatcaatcagtttgatccct 44795783  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| | ||||||||||| |||| ||||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||| |  | |    
T  44795784 gcttgcgtggcatcttacgtggtaagctttgtcagaggttaacgttacacgtcacctccattaacagaccaacttaacggagggactgatttgtttgata 44795883  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | | ||||| |  |  ||||||| |||||||||| ||||||||||||||||||||    
T  44795884 ttttgtaaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttgaggtattagtc 44795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 123 - 307
Target Start/End: Original strand, 43766895 - 43767080
Alignment:
Q  123 aatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtca 221  Q
    |||||| |||||| |||||||| ||||||||||||||||||||  ||||||| |||||| |||||||||||||||| ||||||||||||  ||||| |||    
T  43766895 aatttggtccttgacaattttccgtaaatcaatcaatttggtccctgcttgcgtgacatttgacgtggtaagccttataagaggttaacgttacacatca 43766994  T
Q  222 cctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatt 307  Q
    ||||||||||||||||||| ||||||||  |||||||||||  ||||||||||||||| | ||| |||||| ||||| ||||||||    
T  43766995 cctccgttaacagaccaacgtaacggagtgactgatttgattgacattttgtaaattcaaggacaaaatagctattttgcaaaatt 43767080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 38192178 - 38191895
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| ||||||||  ||||| | |||||| ||||||||||||| |||||||| |    
T  38192178 caattttctgaaaatccatcaatttggtccttggaaattttatgtaaatccattaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtcact 38192079  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    ||||||            ||||||||| |||| ||||||||||   ||| ||||||||||||||||||||||||||||||||| |||||||||||  |||    
T  38192078 gcttgc------------gtggtaagctttgtcagaggttaacgtgacatgtcacctccgttaacagaccaacttaacggagggactgatttgattgaca 38191991  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||   |||||| |||||| ||| ||||||||||||||||||||    
T  38191990 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttgaggtattagtc 38191895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 70 - 363
Target Start/End: Complemental strand, 28626705 - 28626411
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| |||||||| ||||||||||||  ||    
T  28626705 aattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctg 28626606  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| |||||||||| || |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  ||||    
T  28626605 cttgcgtggcatctgacgtggtacgctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaatttaacggagggactaatttgattgacat 28626506  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||  | ||||||||| | |||| | ||||||| | |   ||||||| |||||||||| || | |||||||||||||||    
T  28626505 tttgtaaattcagggactattttgatatttcgaataattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 28626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 27899145 - 27899225
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| ||||||||||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  27899145 gactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 27899225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 364
Target Start/End: Original strand, 53190823 - 53190904
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||||||||||||||| | ||||||||| ||  ||||||| |||||||||| |||||||||||||||||||||    
T  53190823 gactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 53190904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 2226216 - 2226296
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | ||||||||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  2226216 gactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 2226296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 21348803 - 21348723
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| ||||||||||| ||  ||||||| |||||||||| || |||||||||||||||||    
T  21348803 gactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 21348723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 23293234 - 23293314
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| |||| |||||| || ||||||||  |||||||||||| |||||||||||||||||    
T  23293234 gactaaatagatatttcgcaaaattcaagggcgaatttggctgatttttcgaaattcaagaacaaatttgaggtattagtc 23293314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 274 - 363
Target Start/End: Complemental strand, 51684699 - 51684610
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| |||||||| | ||| ||||| || ||||||||||||||||||| ||||||||||| ||||||||    
T  51684699 aaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattcaaggacgaatttgagatattagtc 51684610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 54898517 - 54898437
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | ||||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  54898517 gactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 54898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 42282277 - 42282360
Alignment:
Q  45 gagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||| |||||| |||||||||||||||| | || ||||||||||| |||||| |||||||||| |||||||| ||||||    
T  42282277 gagaaagagccgttgggaattttgcaattttcttaaaaacaatcaatttggtccttggcaattttctgtaaatcaatcaatttg 42282360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 365
Target Start/End: Complemental strand, 46112567 - 46112485
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||||||||||||| |||||||| ||  ||||||| ||  ||||||| |||||||||| ||||||||||||||||||||||    
T  46112567 gactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 46112485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 175 - 354
Target Start/End: Original strand, 24846447 - 24846626
Alignment:
Q  175 tgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgta 274  Q
    |||||| |||||| |||||||||||||   ||||||| ||||  |||||||||||||||  ||||||||||||||| |||||||| ||  |||||||| |    
T  24846447 tgacatttgacgtagtaagccttgtaaacagttaacagtacatatcacctccgttaaca-tccaacttaacggagggactgatttaattgacattttgaa 24846545  T
Q  275 aat--tcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgag 354  Q
    |||   | || |  ||||| |||||||||||||||| ||||||||||    |||||||| ||||| |||| ||||| |||||    
T  24846546 aatacactatta-aaaatatatatttcgcaaaatttgaggacgaatttacctgatttttaaaaatccaaggacgaaattgag 24846626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 2377109 - 2377032
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||| || ||| |||||||| | ||||||||| |||  |||||||||||||||| ||||||||||||||||||    
T  2377109 gactaaatatattttttgcaaaattcagggacgaatttggtcaatttttgaaaattcaaaaacgaatttgaggtatta 2377032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 43765216 - 43765139
Alignment:
Q  284 actaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattag 361  Q
    ||||||||||||||||||||||||   | ||||||| |   |||||||||||||||||| ||||||||||||||||||    
T  43765216 actaaatagatatttcgcaaaattccggaacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattag 43765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 17516800 - 17516860
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||    
T  17516800 gcaattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttg 17516860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 30599982 - 30600062
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | |||| |||| ||  ||||| | |||||| ||| ||||||||||||||||||||    
T  30599982 gactaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaaggacgaatttgaggtattagtc 30600062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41978830 - 41978870
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  41978830 attgaagctctctcacatcatcattgtacatagagcttgaa 41978870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42281979 - 42282019
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42281979 attgaagctctctcacatcatcattgtacatagagcttgaa 42282019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51685857 - 51685897
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51685857 attgaagctctctcacatcatcattgtacatagagcttgaa 51685897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 53188387 - 53188347
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  53188387 attgaagctctctcacatcatcattgtacatagagcttgaa 53188347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 274 - 357
Target Start/End: Complemental strand, 2660301 - 2660218
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggta 357  Q
    |||||| | |||||| | |||||||||||||||| | ||||||| | ||| ||||||| |||||||||| ||||||||||||||    
T  2660301 aaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattcaaggacgaatttgaggta 2660218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 365
Target Start/End: Complemental strand, 17515390 - 17515308
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    ||||||||||||||||||||||||| |  || ||||| ||   |||||| |||||||||| | ||||||||||||||||||||    
T  17515390 gactaaatagatatttcgcaaaattcagcgatgaatttggccaatttttaaaaattcaaggaagaatttgaggtattagtcta 17515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 42279587 - 42279510
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||||||||||||| ||||||||    ||||||||  | ||||||||||||||||||  |||||||||||||||||    
T  42279587 gactaaatagatattttgcaaaattctgagacgaattgagctgatttttgaaaattcaatgacgaatttgaggtatta 42279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 600805 - 600725
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||||||| | |||||| | | || |||| ||| ||||||| |||||||||| | ||||||||||||||||||    
T  600805 gactaaatagatattttgtaaaattcatgaacaaatttggtcgattttttaaaattcaaggatgaatttgaggtattagtc 600725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7883936 - 7883896
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  7883936 attgaagctctctcacatcaacattgtacatagagcttgaa 7883896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27897802 - 27897762
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  27897802 attgaagctctctcacctcatcattgtacatagagcttgaa 27897762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35904436 - 35904396
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  35904436 attgaagctctctcacatcatcattgtacatggagcttgaa 35904396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 41977830 - 41977750
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||| ||||| | ||||| ||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  41977830 gactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 41977750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 23875834 - 23875760
Alignment:
Q  195 cttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacatt 269  Q
    ||||| |||||||||||||||| ||||||||| |||||| | ||| ||||  |||| ||||||||||| ||||||    
T  23875834 cttgtgagaggttaacaatacatgtcacctccattaacatatcaagttaatagagggactgatttgattaacatt 23875760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 30598599 - 30598546
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaat 121  Q
    |||||||||||| |||| ||||||||| || |||||||||||||| ||||||||    
T  30598599 gcaattttctgaaaatccatcaatttggtcattgacaattttctgtaaatcaat 30598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 2378764 - 2378804
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaa 139  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  2378764 ttgacaattttctgaaaatccatcaatttgatccttggcaa 2378804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21350101 - 21350141
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  21350101 attgaagctctctcaccttatcattgtacatagagcttgaa 21350141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 23291831 - 23291771
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||| |||||||||||| |||| ||| ||||||    
T  23291831 gcaattttctgaaaatccatcaatttggtcctcgacaattttctgtaaattaatcaatttg 23291771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23292181 - 23292141
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||| |||||| ||||||||||||||||||||||||    
T  23292181 attgaagctttctcacctcatcattgtacatagagcttgaa 23292141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 35905776 - 35905835
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaag 342  Q
    ||||||||||||||||||||||||| | ||||||||| |   ||||||| ||||||||||    
T  35905776 gactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaag 35905835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 7884950 - 7884988
Alignment:
Q  325 gatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  7884950 gattttttaaaattcaaggacgaatttgaggtattagtc 7884988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2378420 - 2378460
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| |||| ||| |||||||||||||||    
T  2378420 attgaagctctctcacctcattattttacatagagcttgaa 2378460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 2378810 - 2378870
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| || ||| |||||||||  |||||||| ||||||    
T  2378810 gcaattttctgaaaatccatcaatttggtcattggcaattttctttaaatcaatcaatttg 2378870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 21350432 - 21350492
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||  ||||||||| | |||| |||||||||| |||||||| ||||||    
T  21350432 gcaattttctgaaaattcatcaatttggttcttggcaattttctgtaaatcaatcaatttg 21350492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24846053 - 24846093
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||| |||||| |||| ||||||||||||||||||||    
T  24846053 attgaagcactctcatatcaccattgtacatagagcttgaa 24846093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 30598939 - 30598907
Alignment:
Q  9 tctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||| ||||||||||||||||||||||||    
T  30598939 tctctcacctcatcattgtacatagagcttgaa 30598907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 43766536 - 43766568
Alignment:
Q  9 tctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||| ||||||||||||||||||||||||    
T  43766536 tctctcacctcatcattgtacatagagcttgaa 43766568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44274955 - 44274915
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||| |||||| |||||||||||||||||| |||||    
T  44274955 attgaagctttctcacctcatcattgtacatagagattgaa 44274915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 44794287 - 44794208
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||| ||| | ||  || |||| |||||||||| ||||||||||||||||||||    
T  44794287 gactaatttgatatttcgcaaaattcagggatgaaattggccga-ttttcaaaattcaaggacgaatttgaggtattagtc 44794208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 46199126 - 46199166
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||| || ||||||||||| ||||||||||||    
T  46199126 attgaagctctcttacctcatcattgtatatagagcttgaa 46199166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 26238987 - 26238726
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtc-atgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  26238987 caattttctgaaaatcaatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccatgcttgcgtgacatctgacgtggtaagccttgtaa 26238888  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  26238887 gaggttaacagtacacatcacctccgttaacagactaacttaacggagggactgatttgatggacattttgtaaattcgaggactaaatagatatttcgc 26238788  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  26238787 aaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 26238726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 68 - 365
Target Start/End: Complemental strand, 41824186 - 41823888
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca- 166  Q
    ||||| ||||||  ||||||||||||| |||||  || |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||      
T  41824186 gcaatattctgaatatcaatcaatttggtcctttgcacttttctgaaaatcaatcaatttgatccttggcaattttatgtaaatcaatcaatttggtccc 41824087  T
Q  167 tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaac 266  Q
    || |||| || | | |||||||||||||| ||||||||||||||  |||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  41824086 tgtttgcgtggcttctgacgtggtaagccatgtaagaggttaactgtacaagtcacctccgttaatagaccaacttaacggagggactgatttgatgaac 41823987  T
Q  267 attttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |  | ||||||||||||||||||| |||||||| |||||||||||||    
T  41823986 attttgtaaattcgaggactaaatagatatttcgcaaaattcaaggacgaaattagctgatttttgaaaattcaaggacgaatttaaggtattagtcta 41823888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 42943250 - 42943515
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    ||||||||||||| |||||| || |||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||    
T  42943250 ttgacaattttctaaaaatccatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagcctt 42943349  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||||||||||||    
T  42943350 gtaagaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatatt 42943449  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||| | ||||||||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  42943450 tcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 42943515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 103 - 366
Target Start/End: Original strand, 22273719 - 22273983
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||||||||||||||||||||  ||||||  |||||| ||||||||||||||||||||    
T  22273719 caattttctaaaaatccatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgtgtgacatctgacgtggtaagccttgtaa 22273818  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||||||||||||| ||    
T  22273819 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatattttgc 22273918  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    |||||| |  ||| |||| ||  ||||||| |||||||||| || ||||||||||||||||||||    
T  22273919 aaaattcagagacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtctat 22273983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 104 - 363
Target Start/End: Original strand, 5037893 - 5038150
Alignment:
Q  104 aattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtc-atgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    ||||||||||||||| || ||  || ||||| |||||||||||||||||||||||||||||| ||  |||| || ||| |||||||||||||||||||||    
T  5037893 aattttctgaaaatccatcaagctggtccttagcaattttctgtaaatcaatcaatttggtccat--ttgcgtggcatctgacgtggtaagccttgtaag 5037990  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgca 302  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||||||| |||||||||    
T  5037991 aggttaacattacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagctatttcgca 5038090  T
Q  303 aaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||| ||| ||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  5038091 aaattcaagaacgaatttgaccgattttttaaaattcaag-acgaatttgaggtattagtc 5038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 45 - 278
Target Start/End: Complemental strand, 3152276 - 3152042
Alignment:
Q  45 gagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttc 144  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||  || ||||||||||||    
T  3152276 gagaaagagtcgttgggaattttgcaattttctgaaaatcaatcaatttggtccttgataattttctgaaaatcaatcaatttagtcattggcaattttc 3152177  T
Q  145 tgtaaatcaatcaatttggt-catgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaactta 243  Q
    |||||||||||||||||||| | ||||||| |||||| ||||||||||| |||||||||||||||||| |||| ||||| ||  |||||| |||||||||    
T  3152176 tgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaaaccttgtaagaggttaacattacatgtcacatctattaacataccaactta 3152077  T
Q  244 acggaggtactgatttgatgaacattttgtaaatt 278  Q
    || |||| ||| |||||||  ||||||||||||||    
T  3152076 acagagggactaatttgattgacattttgtaaatt 3152042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 27692631 - 27692926
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  |    
T  27692631 caattttctgaaaatctatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccct 27692730  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| | ||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||| ||  |||    
T  27692731 gcttgcgtggcatcttacgtggtaagctttgtcagaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttaattgaca 27692830  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||| |||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  27692831 ttttgtaaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 69 - 366
Target Start/End: Original strand, 29238981 - 29239279
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  29238981 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 29239080  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||||||||| ||| |||||||  | |    
T  29239081 gcttgcgtgacatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaacggagggactaatttgattgata 29239180  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    ||||||||||||   |||||| | ||||||||| |||||||| ||||||| | ||  ||||||| |||||||||| |||||||||||||||||||||||    
T  29239181 ttttgtaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtctat 29239279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 43261967 - 43262226
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| | ||||||||| |||||| || |||  ||||||||| ||||||||||||||||||  ||||||| ||||||  |||||||||||| ||||||    
T  43261967 caatttttttaaaatcaatcaatttggtctttgaaaattttctgaaaatcaatcaatttggtccctgcttgcgtgacatcagacgtggtaagctttgtaa 43262066  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  || | ||||||  ||||||||||||||||||||||||  |||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  43262067 gaggttaacggtagatgtcacc--cgttaacagaccaacttaacggagagactgatttgattgacattttgtaaattcgaggactaaatagatatttcgc 43262164  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||| || ||||||  | ||||||||||||||| ||| ||||||||||||||||||||    
T  43262165 aaaatttagggtcgaatttagctgatttttgaaaatttaaggacgaatttgaggtattagtc 43262226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 33761364 - 33761069
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  33761364 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 33761265  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
     ||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||  |||    
T  33761264 acttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtaacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgaca 33761165  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | || |||||||| |||||||||  ||||||||||||||||||||    
T  33761164 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttgaggtattagtc 33761069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 103 - 360
Target Start/End: Original strand, 13283823 - 13284081
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||| |||||| ||||||| ||||| |||| |    
T  13283823 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtgacatctgacgtgataagctttgtca 13283922  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||| | ||||||||||    
T  13283923 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcatggactaatttgatatttcgc 13284022  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||| | |||| || | ||  ||||||| |||||||||| ||||||||| |||||||    
T  13284023 aaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgtggtatta 13284081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 38548659 - 38548920
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||  |||||| ||||||||||||| |||||||  ||||||| || ||| ||||||||||||| |||| |    
T  38548659 caattttctgaaaatccatcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtca 38548758  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||||||||   || ||| | ||||||||||    
T  38548759 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgaaattttgtaaattcagggattaatttgatatttcgc 38548858  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  38548859 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 38548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 35510613 - 35510908
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  35510613 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 35510712  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||| ||||| |||| ||||||||||   | ||||||||||||||||||||||||||||||||||| |||||||||||  |||    
T  35510713 gcttgcgtgacatctgacgtgttaagctttgtcagaggttaacgtgatacgtcacctccgttaacagaccaacttaacggagggactgatttgattgaca 35510812  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||| ||||||| ||||||||| | |   ||||||| |||||||||| ||||||||||||||||||||    
T  35510813 ttttgtaaattcagggactaatttgatatttcacaaaattcaaggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 35510908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 69 - 364
Target Start/End: Original strand, 601498 - 601794
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||||||||||||||||| |||||||  |    
T  601498 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttctgtaaatcaatcagtttggtccct 601597  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| ||  || ||||||||||||| |||| ||||||||||   | ||||||||||||||||||||||||||||||||||| ||| |||||||  |||    
T  601598 gcttgcgtggtatttgacgtggtaagctttgtcagaggttaacgtgaaacgtcacctccgttaacagaccaacttaacggagggactaatttgattgaca 601697  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | ||  ||||||| |||||||||| |||||||||||||||||||||    
T  601698 ttttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtct 601794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 8608499 - 8608237
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||| |  ||| ||||||||||||| |||| |    
T  8608499 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgttgcatctgacgtggtaagctttgtca 8608400  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||   |||||| | ||||||||||    
T  8608399 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttataaattcagggactaatttgatatttcgc 8608300  T
Q  302 aaaattt-aaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||| | ||||||| | |   ||||||| |||||||||| |||||||| |||||||||||    
T  8608299 aaaatttcagggacgaaattgaccgatttttcaaaattcaaggacgaatttaaggtattagtc 8608237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 13107065 - 13106804
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||| || ||| ||||||||||||| |||| |    
T  13107065 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtca 13106966  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||||||  | ||||| |||||||   |||||| | ||||||||||    
T  13106965 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactaatttgattgaaattttataaattcagggactaatttgatatttcgc 13106866  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||| ||| | ||  ||||||| |||||||||| |||||||| |||||||||||    
T  13106865 aaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttaaggtattagtc 13106804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 103 - 362
Target Start/End: Complemental strand, 33707467 - 33707207
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| |||||||| || |||||| ||||||  |||||| ||||||||||||| |||||||  ||||||| |||||| ||||||||||||| |||| |    
T  33707467 caattttatgaaaatccatcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtccctgcttgcttgacatctgacgtggtaagctttgtca 33707368  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||  ||||||| |||||||   |||||| | |||||||||     
T  33707367 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagtgactgatttgattgacattttataaattcagggactaatttgatatttcgt 33707268  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    |||||| | ||||||| | |   ||||||| |||||||||| |||||||||||||||||||    
T  33707267 aaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagt 33707207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 29237446 - 29237151
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcat- 167  Q
    ||||||||||| |||| |||||||||  |||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| ||||||| |     
T  29237446 caattttctgaaaatccatcaatttgacccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtcctt 29237347  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||| ||||| ||| |||||||  |||    
T  29237346 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaatggagggactaatttgattgaca 29237247  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | |   ||||||| |||||||||| ||||||||||||||||||||    
T  29237246 ttttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 33762511 - 33762802
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||| ||||||||| |||||||  |    
T  33762511 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtgaatcaatcagtttggtccct 33762610  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||| |||    ||||||||   ||||||||||||||||||||||||||||||||||||| | |||||||||  |||    
T  33762611 gcttgcgtgacatctgacgtggtaagctttg----aggttaacgtgacacgtcacctccgttaacagaccaacttaacggagggattgatttgattgaca 33762706  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  33762707 ttttgtaaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 33762802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 41040982 - 41040720
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaa-tcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgta 200  Q
    |||||||||||||||| || |||||| |||||| ||||||||| |||| |||||||||||||||  ||||||| |||||| |||||||||||| ||||||    
T  41040982 caattttctgaaaatccatcaatttgctccttgacaattttctctaaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagtcttgta 41040883  T
Q  201 agaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcg 300  Q
    |||||| |||  ||||||||||||| |||||||||||||||||||||||| || ||||||||  ||||||||||||||| | ||| |||||| ||||| |    
T  41040882 agaggtcaacgttacacgtcacctctgttaacagaccaacttaacggagggaccgatttgattgacattttgtaaattcaaggacaaaatagctattttg 41040783  T
Q  301 caaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
     |||||| |   |||||||  |  ||||||| |||||||||  || |||||||||||||||||    
T  41040782 gaaaattcagaaacgaatttagccgatttttaaaaattcaaagacaaatttgaggtattagtc 41040720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 35509509 - 35509214
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  35509509 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttttgtaaatcaatcagtttggtccct 35509410  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||| |||||||||  |||||||||||| | |||||||||||  |||    
T  35509409 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcaccttcgttaacaggtcaacttaacggatggactgatttgattgaca 35509310  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | |   ||||||| |||||||||| || |||||||||||||||||    
T  35509309 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttgaggtattagtc 35509214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 137 - 364
Target Start/End: Complemental strand, 13484771 - 13484544
Alignment:
Q  137 caattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacaga 235  Q
    |||||||||| ||||| ||||||||||||  ||||||  || ||| |||||||||||||||||||| ||||||||  | |||||||||| |||||| |||    
T  13484771 caattttctgaaaatccatcaatttggtccctgcttgtgtggcatctgacgtggtaagccttgtaaaaggttaacgtt-cacgtcaccttcgttaataga 13484673  T
Q  236 ccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaa 335  Q
    ||||||||| ||||| |||||||||||  ||||||||||||||| | ||| |||||   ||||||||||||| | ||||||||| ||  |||||||||||    
T  13484672 ccaacttaatggagggactgatttgattgacattttgtaaattcaaggacaaaataacaatttcgcaaaattcagggacgaatttggccgatttttgaaa 13484573  T
Q  336 attcaagaacgaatttgaggtattagtct 364  Q
    ||||||  |||||||||||| ||||||||    
T  13484572 attcaatgacgaatttgaggcattagtct 13484544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 70 - 363
Target Start/End: Original strand, 15308056 - 15308350
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||| ||||||  |||||| |  ||||| ||  ||||  |||||   |||||| | |||||||||||||||||||  ||    
T  15308056 aattttctgaaaatccatcaatttggtccttggaaattttgtttaaatccatcgatttcgtccttcaaaattttgtataaatcaatcaatttggtccctg 15308155  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| ||||||||||||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||  || |||||||  ||||    
T  15308156 cttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaacggaggggctaatttgattgacat 15308255  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||| | ||||||||| | |||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  15308256 tttgtaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15308350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 70 - 363
Target Start/End: Original strand, 15488425 - 15488719
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||| ||||||  |||||| |  ||||| ||  ||||  |||||   |||||| | |||||||||||||||||||  ||    
T  15488425 aattttctgaaaatccatcaatttggtccttggaaattttgtttaaatccatcgatttcgtccttcaaaattttgtataaatcaatcaatttggtccctg 15488524  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| ||||||||||||| |||| ||||||||||   |||||||||||||||||||||||||||||||||||||  || |||||||  ||||    
T  15488525 cttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaacggaggggctaatttgattgacat 15488624  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||| | ||||||||| | |||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  15488625 tttgtaaattcagggactaatttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 15488719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 70 - 360
Target Start/End: Complemental strand, 27404504 - 27404213
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||| ||||||  |||||| || ||||  || |||||  || || | |||||| ||||||||||||| |||||||  ||    
T  27404504 aattttctgaaaatccatcaatttggtccttggaaattttgtgtaaattcatcaatttagtcattcgaaattttgtgtaaatcaatcagtttggtccctg 27404405  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| |||||| |||||||||| || |||| ||||||||||   ||||||||||||||||||||||||||||||||| ||| ||| |||||||  ||||    
T  27404404 cttgcgtgacatctgacgtggtacgctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaacgaagggactaatttgattgacat 27404305  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||| ||||||    |||||  | ||||||||| | |||| | ||||||| | ||  ||||||| |||||||||| || | ||||||||||||    
T  27404304 tttataaatttagggactattttgatatttcgaataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtatta 27404213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 165 - 319
Target Start/End: Complemental strand, 17807217 - 17807063
Alignment:
Q  165 catgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatga 264  Q
    ||||||| | |||||| |||| | ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||| |||||  ||| ||||||      
T  17807217 catgcttacgtgacatctgacatcgtaagccttgtaagaggttaacagtacatgtcacctccgttaacaggccaacttaatggagggtctggtttgattg 17807118  T
Q  265 acattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaatt 319  Q
    || |||||||||||||  ||||||||| |||||| ||||||||| ||||||||||    
T  17807117 acgttttgtaaattcggggactaaataaatattttgcaaaatttgaggacgaatt 17807063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 206 - 341
Target Start/End: Complemental strand, 15562580 - 15562446
Alignment:
Q  206 ttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaa 305  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||   ||||||| |||||||  |||||    
T  15562580 ttaacagtacatgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttataaattcg-gaactaaattgatattttacaaaa 15562482  T
Q  306 tttaaggacgaattcggttgatttttgaaaattcaa 341  Q
    |||||||||||||| |  |||||||| |||||||||    
T  15562481 tttaaggacgaatttgactgatttttaaaaattcaa 15562446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 26239013 - 26238928
Alignment:
Q  43 aggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||| ||||||    
T  26239013 aggagaaagagtcgttggaaattttgcaattttctgaaaatcaatcaatttggtccttggcaattttctgtaaatcaatcaatttg 26238928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 41824245 - 41824126
Alignment:
Q  43 aggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattt 142  Q
    ||||||||||| ||| || |||||||||||||||||| |||||||||||||| || ||| |||| ||||||| |||||| |||||| ||||| ||| |||    
T  41824245 aggagaaagagccgtcggtaattttgcaattttctgaaaatcaatcaatttgatcattggcaatattctgaatatcaatcaatttggtcctttgcacttt 41824146  T
Q  143 tctgtaaatcaatcaatttg 162  Q
    |||| |||||||||||||||    
T  41824145 tctgaaaatcaatcaatttg 41824126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 26242378 - 26242455
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  26242378 gactaaatagatatttcgcaaaatttagggacgaatttggctgatttttgaaaattcaagaacgaaattgaggtatta 26242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 167 - 348
Target Start/End: Original strand, 29694210 - 29694391
Alignment:
Q  167 tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaac 266  Q
    ||||||| || ||||||||||||||| ||||||||| |||||| | ||||| |||||||||||||||| | |||||||| |||| |||||||||||  |     
T  29694210 tgcttgcgtggcatatgacgtggtaaaccttgtaagcggttaatagtacacatcacctccgttaacaggctaacttaacagaggaactgatttgattgat 29694309  T
Q  267 attttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaa 348  Q
    |||||  |||||  |  ||||||||||||||| |||||| |||| || |||||  | | ||||||||||||| ||| |||||    
T  29694310 attttaaaaatttaagaactaaatagatattttgcaaaaattaaagatgaatttagcttatttttgaaaatttaaggacgaa 29694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 41825708 - 41825785
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||||||||||||||    
T  41825708 gactaaatagatatttcgcaaaattcaaggacgaatttatttgatttttgaaaattcaaggacgaatttgaggtatta 41825785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 8609851 - 8609931
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | ||||||||| ||  ||||||| |||||||||||||||||||||||||||||||    
T  8609851 gactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaacgaatttgaggtattagtc 8609931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 9672096 - 9671980
Alignment:
Q  244 acggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaaga 343  Q
    ||||||| || ||||||||  | ||||||||||||||  ||||||||||||||||||||||||| | ||||||||| | ||||||  ||||||||||||     
T  9672096 acggaggaaccgatttgattgaaattttgtaaattcggggactaaatagatatttcgcaaaattcatggacgaatttgattgattggtgaaaattcaagg 9671997  T
Q  344 acgaatttgaggtatta 360  Q
    |||||||| ||||||||    
T  9671996 acgaatttaaggtatta 9671980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 34681075 - 34681155
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | ||||||||| ||  |||||||||||||||||| ||||||||||||||||||||    
T  34681075 gactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 34681155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 13282558 - 13282477
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||||||||||||||| | ||||||||| ||  ||||||| |||||||||| |||||||||||||||||||||    
T  13282558 gactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtct 13282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 283 - 365
Target Start/End: Original strand, 7745176 - 7745258
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    ||||||||| ||||||||||||||| |  |||||||| || ||||||||||||||||||  ||||||||||| ||||||||||    
T  7745176 gactaaataaatatttcgcaaaattcagagacgaatttggctgatttttgaaaattcaaagacgaatttgagatattagtcta 7745258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 283 - 360
Target Start/End: Complemental strand, 42941854 - 42941777
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||| ||||||| ||||||| | ||||||||| || |||||||| |||||||||| |||||||||||||||||    
T  42941854 gactaaataaatatttctcaaaattcagggacgaatttggctgattttttaaaattcaaggacgaatttgaggtatta 42941777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 41824219 - 41824157
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtc 165  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||| | ||||||||||||||||    
T  41824219 caattttctgaaaatcaatcaatttgatcattggcaatattctgaatatcaatcaatttggtc 41824157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 5036534 - 5036446
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    |||||| | ||||||||||||||||| ||||||| | ||||||||| |   ||||||| |||||| ||| |||||||||||||||||||    
T  5036534 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttgacggattttttaaaatttaaggacgaatttgaggtattagt 5036446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 13107415 - 13107375
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13107415 attgaagctctctcacatcatcattgtacatagagcttgaa 13107375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13283473 - 13283513
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13283473 attgaagctctctcacatcatcattgtacatagagcttgaa 13283513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15307729 - 15307769
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15307729 attgaagctctctcacatcatcattgtacatagagcttgaa 15307769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15488098 - 15488138
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15488098 attgaagctctctcacatcatcattgtacatagagcttgaa 15488138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26239320 - 26239280
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26239320 attgaagctctctcacatcatcattgtacatagagcttgaa 26239280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27404831 - 27404791
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27404831 attgaagctctctcacatcatcattgtacatagagcttgaa 27404791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 27691234 - 27691154
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  27691234 gactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27691154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29238631 - 29238671
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29238631 attgaagctctctcacatcatcattgtacatagagcttgaa 29238671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38548309 - 38548349
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38548309 attgaagctctctcacatcatcattgtacatagagcttgaa 38548349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 8608847 - 8608809
Alignment:
Q  3 tgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||    
T  8608847 tgaagctctctcacatcatcattgtacatagagcttgaa 8608809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 600819 - 600754
Alignment:
Q  304 aatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaa 369  Q
    |||| ||||||||| | || |||||||| |||||||||| |||||||||||||||||||| |||||    
T  600819 aattcaaggacgaaattggctgatttttcaaaattcaaggacgaatttgaggtattagtccattaa 600754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22273379 - 22273419
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  22273379 attgaagctctctcacctcatcattgtacatagagcttgaa 22273419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 38547308 - 38547228
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||| ||| ||  ||||||| |||||||||| ||||| ||||||||||||||    
T  38547308 gactaatttgatatttcgcaaaattcatggacgtatttggccgattttttaaaattcaaggacgaacttgaggtattagtc 38547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 9795582 - 9795535
Alignment:
Q  315 gaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||    
T  9795582 gaatttggttgatttttgaaaatttaaaaacgaatttgaggtattagt 9795535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 22272416 - 22272334
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttg--aaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||| ||||||||| | ||||||||| |  ||||||||   |||||||||  ||||||||||||||||||||    
T  22272416 gactaaatagatattacgcaaaattcagggacgaatttgactgattttttttaaaattcaaagacgaatttgaggtattagtc 22272334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 41824155 - 41824092
Alignment:
Q  65 tttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||| |||||||| |||||||||||||| |||||| ||||||| || |||||||| ||||||    
T  41824155 tttgcacttttctgaaaatcaatcaatttgatccttggcaattttatgtaaatcaatcaatttg 41824092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 41040983 - 41040922
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttct-gaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||  ||||||||| ||||||    
T  41040983 gcaattttctgaaaatccatcaatttgctccttgacaattttctctaaaatcaatcaatttg 41040922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 13108400 - 13108480
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||| |||  |  ||||||| |||||||||| ||||||||||| ||||||||    
T  13108400 gactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattcaaggacgaatttgagttattagtc 13108480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41041322 - 41041282
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  41041322 attgaagctctctcacctcatcattgtacataaagcttgaa 41041282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 41042648 - 41042728
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||| ||||||| | |||| |||| ||   |||||| |||||||||| ||| |||| |||||||||||    
T  41042648 gactaaatagatatttcacaaaattcagggacaaatttggccaattttttaaaattcaaggacggatttaaggtattagtc 41042728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41824550 - 41824510
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||| ||||||||||||||||||||| ||||||||||||    
T  41824550 attgaaactctctcacatcatcattgtagatagagcttgaa 41824510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 42942906 - 42942946
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  42942906 attgaagctctctcacctcattattgtacatagagcttgaa 42942946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 43261966 - 43262026
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||| | | |||||||||||||| || |||| |||||||||||||||||| ||||||    
T  43261966 gcaatttttttaaaatcaatcaatttggtctttgaaaattttctgaaaatcaatcaatttg 43262026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Complemental strand, 15562675 - 15562646
Alignment:
Q  136 gcaattttctgtaaatcaatcaatttggtc 165  Q
    ||||||||||||||||||||||||||||||    
T  15562675 gcaattttctgtaaatcaatcaatttggtc 15562646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 29693813 - 29693849
Alignment:
Q  5 aagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  29693813 aagcactctcacatcaccattgtacatagagcttgaa 29693849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 69 - 121
Target Start/End: Original strand, 38548659 - 38548711
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaat 121  Q
    ||||||||||| |||| ||||||||| ||||||| |||||| || ||||||||    
T  38548659 caattttctgaaaatccatcaatttggtccttgaaaattttgtgtaaatcaat 38548711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40338410 - 40338370
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||| ||||||||  ||||||||||||||||||||||||    
T  40338410 attgaaactctctcagctcatcattgtacatagagcttgaa 40338370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 1e-98; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 43 - 364
Target Start/End: Complemental strand, 52642209 - 52641887
Alignment:
Q  43 aggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattt 142  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||| || || | |||||    
T  52642209 aggagaaagtgttgttggaaattttgcaattttctgaaaatcaatcaatctgttccttggcaattttctgaaaatcaatcaatttggtcattagaaattt 52642110  T
Q  143 tctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaact 241  Q
    |||| ||||||||||||||||||  ||||||  || ||| ||||||||||||  |||||||| ||||||  |||| |||||||||||||| | |||||||    
T  52642109 tctgaaaatcaatcaatttggtccctgcttgtgtggcatctgacgtggtaagttttgtaagaagttaacggtacatgtcacctccgttaatataccaact 52642010  T
Q  242 taacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaa 341  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||||||| ||||||||||||||| | ||||||||| || ||||||||||||||||||    
T  52642009 taacggagggactgatttgatgaacattttgtaaatttgaggactaaatatatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaa 52641910  T
Q  342 gaacgaatttgaggtattagtct 364  Q
    | |||||||||||||||||||||    
T  52641909 ggacgaatttgaggtattagtct 52641887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 37345756 - 37346051
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||| ||||||| |||||||  |    
T  37345756 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaagtcaatcagtttggtccct 37345855  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||  |||    
T  37345856 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacattacacgtcacctccgttaatagaccaacttaacggagggactgatttgattgaca 37345955  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||| ||| | ||| ||||||| |||||||||| ||||||||||||||||||||    
T  37345956 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttgaggtattagtc 37346051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 103 - 364
Target Start/End: Original strand, 2870904 - 2871166
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| |||||||| || |||||| ||||||||||||||||| ||||||||||||||||||  ||||||  || ||| ||||||||||||||||||||    
T  2870904 caattttatgaaaatccatcaatttggtccttggcaattttctgcaaatcaatcaatttggtccctgcttgtgtggcatctgacgtggtaagccttgtaa 2871003  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||| |||||||||||| |||||||||||||| |||||||||||  ||||||||||||||| | ||| |||||| ||||||||    
T  2871004 gaggttaacgttacacgtcacttccgttaacagagcaacttaacggagggactgatttgattgacattttgtaaattcaaagacaaaatagctatttcgc 2871103  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||| | |||||||||  |  ||||||| |||||||||| ||||||||||| |||||||||    
T  2871104 aaaattcagggacgaatttagccgatttttaaaaattcaaggacgaatttgagatattagtct 2871166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 104 - 363
Target Start/End: Complemental strand, 31237079 - 31236819
Alignment:
Q  104 aattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    ||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||  ||||||| ||  || |||||||||||||||||||||    
T  31237079 aattttctgaaaatccattaatttggtccttgacaattttatgtaaatcaatcaatttggtctctgcttgcgtggtatctgacgtggtaagccttgtaag 31236980  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgca 302  Q
     |||||||  |||||||||||||| ||||||||||||||||||||||| |||||||||||  | |||||||||||||    |||||||||||||||||||    
T  31236979 cggttaacgttacacgtcacctccattaacagaccaacttaacggagggactgatttgattgatattttgtaaattcaggaactaaatagatatttcgca 31236880  T
Q  303 aaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||| | |||| |||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  31236879 aaattcagggacaaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 31236819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 103 - 360
Target Start/End: Complemental strand, 3012116 - 3011858
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||| ||||||||||||||||||||||||||||||  ||||||| ||  || ||||||| ||||||||||||    
T  3012116 caattttctgaaaatccatcaatttggtccttagcaattttctgtaaatcaatcaatttggtctctgcttgcgtggtatctgacgtgataagccttgtaa 3012017  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||| ||||||||| |||||||||||||||| | |||||||||||  |||||||||||||||   |||||||||||||||||||    
T  3012016 gaggttaacgttacacgtcatctccgttaatagaccaacttaacggatggactgatttgattgacattttgtaaattcagagactaaatagatatttcgc 3011917  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||| | | ||||||| |  |||||||| |||||| ||| |||||||||||||||||    
T  3011916 aaaattcaggaacgaatttgactgattttttaaaatttaaggacgaatttgaggtatta 3011858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 99 - 362
Target Start/End: Complemental strand, 50554428 - 50554164
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    |||||||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||  |  ||||||||||| |||||||||||||| |    
T  50554428 ttgacaattttctgaaaatccatcaatttggtccttggcaattttgtgtaaatcaatcaatttggtcccttattgcatgacatttgacgtggtaagccat 50554329  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||||||||||  |||||||| ||||||    ||||||||| ||||    
T  50554328 gtaagaggttaacgttacacgtcacccccgttaacagaccaacttaacgaagggactgatttgattgacattttgcaaattcaggaactaaatagctatt 50554229  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    |  ||||||| | ||||||||| |   ||||||| |||||||||| |||||||||||||||||||    
T  50554228 ttacaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 50554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 69 - 365
Target Start/End: Complemental strand, 8168236 - 8167940
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcatg 168  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| ||||||| |     
T  8168236 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccta 8168137  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||||||||| |||||||||||  ||||    
T  8168136 cttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacat 8168037  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||| ||||   |||||| | |||||||||||||||| |  |||||| | ||  ||||||| |||||||||| ||||||||||||||||||||||    
T  8168036 tttgtacattcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcta 8167940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 81 - 363
Target Start/End: Complemental strand, 25277025 - 25276742
Alignment:
Q  81 aatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgaca 179  Q
    |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  | ||||| || ||    
T  25277025 aatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccctacttgcgtggca 25276926  T
Q  180 tatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattc 279  Q
    | ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  25276925 tctgacgtggtaagctttgtcagaggttaacattacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattc 25276826  T
Q  280 gatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
       |||||| | |||||||||||||||| ||||| ||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  25276825 agggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 25276742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 26223882 - 26223587
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| || |||| |||||| || ||||| || |||||| ||||||| |||||| | ||||||||||| |||||||  |    
T  26223882 caattttctgaaaatccatcaatttggtcgttgaaaattttgtgtaaatccatcaatttggtccttggaaattttgtttaaatcaatcagtttggtccct 26223783  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||||||| ||||| ||| |||||||  |||    
T  26223782 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacacgtcacctccgttaacagaccaacttaatggagggactaatttgattgaca 26223683  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | |   ||||||| |||||||||| ||||||||||||||||||||    
T  26223682 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 26223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 103 - 360
Target Start/End: Complemental strand, 51894828 - 51894570
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| || ||| |||||||||||||||||||||||||||||  |||| || || ||| ||| |||||||| |||||||    
T  51894828 caattttctgaaaatccatcaatttggtcgttgacaattttctgtaaatcaatcaatttggtccctgctggcgtggcatctgatgtggtaagtcttgtaa 51894729  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   ||||||||| |||||||||    
T  51894728 gagtttaacattacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatatatatttcgc 51894629  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||| |  ||| |||| |    |||||| ||||||||||||||||||||| ||||||    
T  51894628 aaaattcagagacaaatttgacccattttttaaaattcaagaacgaatttgatgtatta 51894570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 69 - 368
Target Start/End: Original strand, 27089073 - 27089373
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggt-cat 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| || |||| |||||| ||||||||||||| |||||| | |    
T  27089073 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtcattggaaattttgtgtaaatcaatcagtttggttcct 27089172  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| | ||||||||||| |||| ||||||||||  ||||||||||||||||||||| |||||||||||||| | |||||||||||  |||    
T  27089173 gcttgcgtggcatctaacgtggtaagctttgtcagaggttaacgttacacgtcacctccgttaacaaaccaacttaacggaaggactgatttgattgaca 27089272  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctatt 367  Q
    ||||||||||||   || ||| | |||||||| ||||||| ||||||||| |  |  ||||||| |||||||||| |||||||||||||||||||| |||    
T  27089273 ttttgtaaattcagggattaatttgatatttcacaaaattcaaggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtcaatt 27089372  T
Q  368 a 368  Q
    |    
T  27089373 a 27089373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 8169362 - 8169657
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||| ||||||||| |||||||  |    
T  8169362 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtgaatcaatcagtttggtccct 8169461  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||||||||| | |||||||||  |||    
T  8169462 gcttgcgtgacatctgacgtggtaagctttgttagaggttaacgtgacacgtcacctccgttaacagaccaacttaacggagggattgatttgattgaca 8169561  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||| | |||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  8169562 ttttgtaaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 8169657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 103 - 352
Target Start/End: Complemental strand, 33599479 - 33599229
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||| || ||||||||||||||||  ||||||    
T  33599479 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatatgacgtggtaagttttgtaa 33599380  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||||||||   |||||||||||||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||   || ||| | ||||||||||    
T  33599379 gaggttaaagttacacgtcacctccgttaacagaccaacttaatggagggactgatttgattgacattttgtaaattcagagattaatttgatatttcgc 33599280  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttg 352  Q
    |||||| | ||||||||| |   ||||||| |||||||||| |||||||||    
T  33599279 aaaattcatggacgaatttgaccgatttttcaaaattcaaggacgaatttg 33599229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 103 - 364
Target Start/End: Complemental strand, 46582271 - 46582009
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| |||||||| || |||||| | ||||  |||||| |||||||| |||| |||||||  ||||||| || ||| ||||||||||||| |||| |    
T  46582271 caattttatgaaaatccatcaatttggttcttgaaaattttgtgtaaatctatcattttggtccctgcttgcgtggcatctgacgtggtaagctttgtca 46582172  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||| | ||||||||||    
T  46582171 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgc 46582072  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||| | ||||||| | ||  ||||||| |||||||||| || ||||||||||||||||||    
T  46582071 aaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttgaggtattagtct 46582009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 34776830 - 34776569
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||| |  ||| ||||||| ||||| |||| |    
T  34776830 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtttcatctgacgtgttaagctttgtca 34776731  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||| ||||  | |||||||||||||   |||||| | |||||||||     
T  34776730 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatctgattgaaattttgtaaattcagggactaatttgatatttcgt 34776631  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  34776630 aaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 34776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 99 - 363
Target Start/End: Original strand, 37087960 - 37088225
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    ||||||||||||| ||||||||| ||||||  ||||| ||||||||| |||||||||||||||||||  | ||||  || ||| |||| ||||||| |||    
T  37087960 ttgacaattttctaaaaatcaatcaatttggcccttgacaattttctctaaatcaatcaatttggtccctacttgtgtggcatctgacttggtaagtctt 37088059  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  ||||||||| | ||||||||| |||||||||||||||| |||||||||||  ||||||||||||||  | ||| |||||| ||||    
T  37088060 gtaagaggttaactttacacgtcatcaccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaatttaaggacaaaatagctatt 37088159  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||| | | ||||||| ||  ||||||| |||||||||| | ||||||||||||||||||    
T  37088160 tcgcaaaattcaggaacgaatttggccgattttttaaaattcaaggaagaatttgaggtattagtc 37088225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 4854671 - 4854410
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||  || |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||| || ||||||||||||||||| |||| |    
T  4854671 caattttctgaaaatacatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcgtggcatatgacgtggtaagctttgtca 4854572  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||  |||||||||||  | |||||||||||||   |||||| | ||| ||||||    
T  4854571 gaggttaacgttacacatcacctccgttaacagaccaacttaacggagtgactgatttgattgaaattttgtaaattcagggactaatttgatctttcgc 4854472  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||| | |   ||||||| |||||||||| |||||||||| |||||||||    
T  4854471 aaaattcagggacgaaattgaacgatttttcaaaattcaaggacgaatttgaagtattagtc 4854410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 104 - 279
Target Start/End: Complemental strand, 45045180 - 45045004
Alignment:
Q  104 aattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    ||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||  ||||||| || ||| |||||||||||||||||||||    
T  45045180 aattttctgaaaatccatcaatttggttcttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaag 45045081  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattc 279  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||  ||| |||||||  |||||||||||||||    
T  45045080 aggttaacgttacacgtcacctccgttaacagaccaacttaacggagagactaatttgattgacattttgtaaattc 45045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 47011750 - 47011456
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  47011750 caattttctgaaaatccatcaatttgatccttgg-aattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 47011652  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||||| |||| |||||||||| ||||| |||||  ||     
T  47011651 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacaggccaaattaacggagggactgagttgattgact 47011552  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | |   ||||||| |||||||||| || | |||||||||||||||    
T  47011551 ttttgtaaattcagggactaatttgatatttcgaaaaattcatggacgaaattgtccgatttttcaaaattcaaggactattttgaggtattagtc 47011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 69 - 364
Target Start/End: Original strand, 1443976 - 1444271
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  |||||   |||||| ||||||||||||| |||||||  |    
T  1443976 caattttctgaaaatccatcaatttggtccttgg-aattttgtgtaaatccatcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccct 1444074  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  |||    
T  1444075 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaaattaacggagggactaatttgattgaca 1444174  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||   |||||| | ||||||| | |||||| | |||| || | ||  ||||||| |||||| ||| || | ||||||||||||||||    
T  1444175 ttttgtaaattcagggactaatttgatattttgaaaaattcagggacaaaattggccgatttttcaaaatttaaggactattttgaggtattagtct 1444271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 9120333 - 9120039
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  |||||   |||||| ||||||||||||| |||||||  |    
T  9120333 caattttctgaaaatccatcaatttggtccttgg-aattttgtgtaaatccatcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccct 9120235  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   |||||||||| |||||||| |||||| |||||||||| ||| |||||||  |||    
T  9120234 gcttgcgtgtcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacccccgttaacggaccaaattaacggagggactaatttgattgaca 9120135  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | |   ||||||| |||||||||| || | |||||||||||||||    
T  9120134 ttttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 9120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 103 - 272
Target Start/End: Complemental strand, 6817106 - 6816928
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaat--------tttctgtaaatcaatcaatttggtcat-gcttgcatgacatatgacgtggtaag 193  Q
    |||||||||||||||| || |||||| ||||||||||         |||||| ||||| |||||||||||| | | |||| || ||| |||||||||||     
T  6817106 caattttctgaaaatccatcaatttggtccttggcaacgttggtaatttctgaaaatctatcaatttggtccttgtttgcgtggcatctgacgtggtaac 6817007  T
Q  194 ccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttg 272  Q
    |||||||||||||||||  |||| ||||||||||||||||||||||||||| ||||| |||||||||||  ||||||||    
T  6817006 ccttgtaagaggttaacgttacatgtcacctccgttaacagaccaacttaatggagggactgatttgattgacattttg 6816928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 25278997 - 25279077
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||||| | ||||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  25278997 gactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtc 25279077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 23577817 - 23577682
Alignment:
Q  182 tgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcga 281  Q
    ||||||||||||| |||| ||||||||||   ||||||||||||||||||||| |||| |||||||| | ||||||||| |  |||||||| ||||||      
T  23577817 tgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacaggccaatttaacggacggactgatttggttgacattttgcaaattcat 23577718  T
Q  282 tgactaaatagatatttcgcaaaatttaaggacgaa 317  Q
    ||||||| | |||||||||||||||| |||| ||||    
T  23577717 tgactaatttgatatttcgcaaaattgaaggtcgaa 23577682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 281 - 371
Target Start/End: Complemental strand, 25278936 - 25278846
Alignment:
Q  281 atgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaaaa 371  Q
    ||||||||||||||||||||||||||| | |||| |||| |  ||||||||||||||||||| | |||||||||||||||||| |||||||    
T  25278936 atgactaaatagatatttcgcaaaattcagggacaaatttgactgatttttgaaaattcaaggatgaatttgaggtattagtcaattaaaa 25278846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 2869659 - 2869578
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||||||||||||||| | ||||||||| |   |||||||||||||||||| |||||||||||||||||||||    
T  2869659 gactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtct 2869578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 3013520 - 3013600
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | ||||||||| |  |||| ||| |||||||||| ||||||||||||||||||||    
T  3013520 gactaaatagatatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttgaggtattagtc 3013600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 191 - 352
Target Start/End: Complemental strand, 3369602 - 3369441
Alignment:
Q  191 aagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaat 290  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||  ||  |||||||  |||| | ||||||||   ||  ||||    
T  3369602 aagccttgtgagaggtaaacaatacatgtcacctccgttaacaggccaacttaacggagtgacgaatttgattgacatgtggtaaattcatagatgaaat 3369503  T
Q  291 agatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttg 352  Q
    ||| |||| | ||||||| |||||||||| || || |  ||| ||||||||| |||| ||||    
T  3369502 agacattttgaaaaatttgaggacgaatttggctggtccttgcaaattcaaggacgattttg 3369441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 25278403 - 25278492
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||| |||||||||||||| | ||||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  25278403 aaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 25278492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 274 - 363
Target Start/End: Complemental strand, 37344431 - 37344342
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||| |||||||||||||| | ||||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  37344431 aaattcaaagactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 37344342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 31238539 - 31238619
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | |||| |||| ||  ||||||| |||||||||| || |||||||||||||||||    
T  31238539 gactaaatagatatttcgcaaaattcagggacaaatttggccgattttttaaaattcaaggacaaatttgaggtattagtc 31238619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 365
Target Start/End: Original strand, 34778182 - 34778264
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||| | |||||||||||||||| | ||||| ||| ||  ||||||| |||||||||| ||||||||||||||||||||||    
T  34778182 gactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 34778264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 365
Target Start/End: Original strand, 50556141 - 50556223
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    ||||||||||||||||||||||||| |  |||||||| |  |||||||| |||||||||  ||||||||||| ||||||||||    
T  50556141 gactaaatagatatttcgcaaaattcagagacgaatttgactgattttttaaaattcaaagacgaatttgagatattagtcta 50556223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1443636 - 1443676
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1443636 attgaagctctctcacatcatcattgtacatagagcttgaa 1443676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4855008 - 4854968
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4855008 attgaagctctctcacatcatcattgtacatagagcttgaa 4854968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 4856010 - 4856090
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||| ||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  4856010 gactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 4856090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9120690 - 9120650
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9120690 attgaagctctctcacatcatcattgtacatagagcttgaa 9120650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 25277071 - 25276979
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaattt 161  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| |||||||| ||||||||    
T  25277071 caattttctgaaaatccatcaatttggtccttggaaattttatgtaaatccatcaatttggtccttggaaattttgtgtaaatccatcaattt 25276979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 27087363 - 27087283
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | |||| |||| |   ||||||| |||||| ||| ||||||||||||||||||||    
T  27087363 gactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttgaggtattagtc 27087283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34777179 - 34777139
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34777179 attgaagctctctcacatcatcattgtacatagagcttgaa 34777139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47012090 - 47012050
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  47012090 attgaagctctctcacatcatcattgtacatagagcttgaa 47012050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 52642514 - 52642474
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  52642514 attgaagctctctcacatcatcattgtacatagagcttgaa 52642474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 25277071 - 25277009
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtc 165  Q
    |||||||||||||||| || |||||| ||||||| |||||| |||||||| ||||||||||||    
T  25277071 caattttctgaaaatccatcaatttggtccttggaaattttatgtaaatccatcaatttggtc 25277009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 52643659 - 52643736
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||| ||||||||||||||| | |||||||||    |||||||| |||||| ||| |||||||||||||||||    
T  52643659 gactaaataaatatttcgcaaaattcagggacgaatttaactgatttttaaaaatttaaggacgaatttgaggtatta 52643736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 6818722 - 6818802
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||||||| || ||||  | |||||| || ||  ||||||| |||||||||| ||||||||||||||||||||    
T  6818722 gactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaaggacgaatttgaggtattagtc 6818802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26224232 - 26224196
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagct 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  26224232 attgaagctctctcacatcatcattgtacatagagct 26224196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27088723 - 27088763
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  27088723 attgaagctctctcacatcatcattgaacatagagcttgaa 27088763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 33599830 - 33599790
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  33599830 attgaagctctctcacatcatcattgtacatagagtttgaa 33599790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 51894829 - 51894769
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| || |||||||||||||| |||||||| ||||||    
T  51894829 gcaattttctgaaaatccatcaatttggtcgttgacaattttctgtaaatcaatcaatttg 51894769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 51896196 - 51896276
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | |||| |||| |  |||||||| |||||| ||| ||| ||||||||||| ||||    
T  51896196 gactaaatagatatttcgcaaaattcagggacaaatttgactgattttttaaaatttaaggacggatttgaggtatcagtc 51896276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 364
Target Start/End: Complemental strand, 33599249 - 33599186
Alignment:
Q  301 caaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||| ||||||||||| |   ||||||| |||||||||| |||||||||||||||||||||    
T  33599249 caaaattcaaggacgaatttgcccgatttttcaaaattcaaggacgaatttgaggtattagtct 33599186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 283 - 365
Target Start/End: Original strand, 9121712 - 9121794
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||| | ||||||||| |||||||| ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||||    
T  9121712 gactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcta 9121794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 20944885 - 20945010
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggt-catg 168  Q
    |||||||||| |||| ||||||||| | ||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||| | | ||    
T  20944885 aattttctgaaaatccatcaatttggttcttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttgatccctg 20944984  T
Q  169 cttgcatgacatatgacgtggtaagc 194  Q
    ||||| || ||| |||||||||||||    
T  20944985 cttgcgtggcatctgacgtggtaagc 20945010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 3012117 - 3012057
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||||  |||||||||| |||||||| ||||||    
T  3012117 gcaattttctgaaaatccatcaatttggtccttagcaattttctgtaaatcaatcaatttg 3012057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3012465 - 3012425
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  3012465 attgaagctctctcacctcatcactgtacatagagcttgaa 3012425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15105830 - 15105870
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||| ||||||||||||| |||||||    
T  15105830 attgaagctctctcacatcttcattgtacatagggcttgaa 15105870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31237429 - 31237389
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  31237429 attgaagctctctcaccttatcattgtacatagagcttgaa 31237389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37087616 - 37087656
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  37087616 attgaagctctctcacctcatcattgtacacagagcttgaa 37087656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 46583600 - 46583680
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | |||| || | |   ||||||| |||||||||| ||||||||||||||||||||    
T  46583600 gactaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 46583680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50554790 - 50554750
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  50554790 attgaagctctctcaccacatcattgtacatagagcttgaa 50554750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 6816933 - 6816866
Alignment:
Q  295 atttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    |||| |||||||| | ||||||||| |   ||||||| |||||||||| |||||||||||||||||||    
T  6816933 attttgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagt 6816866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 37087964 - 37088023
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||| | ||||||||||||||  |||||||||||||||  |||||||| ||||||    
T  37087964 caattttctaaaaatcaatcaatttggcccttgacaattttctctaaatcaatcaatttg 37088023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 50554424 - 50554365
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||| |||| ||||||||| |||||| ||||||| || |||||||| ||||||    
T  50554424 caattttctgaaaatccatcaatttggtccttggcaattttgtgtaaatcaatcaatttg 50554365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 31237079 - 31237021
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||| |||| || |||||| |||||||||||||| || |||||||| ||||||    
T  31237079 aattttctgaaaatccattaatttggtccttgacaattttatgtaaatcaatcaatttg 31237021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 33602688 - 33602765
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||| | |||||||| ||||||| | ||||||| | |   ||||||| |||||||||| |||||||||||||||||    
T  33602688 gactaatttgatatttcacaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttgaggtatta 33602765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 45044986 - 45044949
Alignment:
Q  326 atttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  45044986 attttttaaaattcaaggacgaatttgaggtattagtc 45044949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 43 - 75
Target Start/End: Original strand, 15106133 - 15106165
Alignment:
Q  43 aggagaaagagtcgttggaaattttgcaatttt 75  Q
    ||||||||||| |||||||||||||||||||||    
T  15106133 aggagaaagagccgttggaaattttgcaatttt 15106165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 244 - 364
Target Start/End: Original strand, 47013087 - 47013207
Alignment:
Q  244 acggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaaga 343  Q
    ||||||| |||||||||||| || |||   ||||||   |||||| | ||||||||| |||||| | ||||||| | |   ||||||| ||||||||||     
T  47013087 acggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccgatttttcaaaattcaagg 47013186  T
Q  344 acgaatttgaggtattagtct 364  Q
    || | ||||||||||||||||    
T  47013187 actattttgaggtattagtct 47013207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 173; Significance: 1e-92; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 91 - 366
Target Start/End: Complemental strand, 47384567 - 47384291
Alignment:
Q  91 tttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtgg 189  Q
    |||| |||||| ||||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||    
T  47384567 tttggtccttggcaattttctgaaaatcaatcaatttggtccttgacaattttatgtaaatcaatcaatttggtcactgcttgcgtgacatctgacgtgg 47384468  T
Q  190 taagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaa 289  Q
    |||||||||||||||||||||  |||| |||||||||||||||| |||||||||||||||| |||||||||||  ||||||||||||||||  ||||||     
T  47384467 taagccttgtaagaggttaacgttacatgtcacctccgttaacataccaacttaacggagggactgatttgattgacattttgtaaattcggggactaat 47384368  T
Q  290 tagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    |||||||||||||||||| ||||||||||| || | |||||| |||||||||| |||||||||||||||||||||||    
T  47384367 tagatatttcgcaaaattcaaggacgaatttggctcatttttcaaaattcaaggacgaatttgaggtattagtctat 47384291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 103 - 371
Target Start/End: Complemental strand, 24226842 - 24226573
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||| ||||||||| |||||||||||||||||||  ||||||  ||| || ||||||||||||||||||||    
T  24226842 caattttctgaaaatccatcaatttggtccttgacaattttctctaaatcaatcaatttggtccctgcttgtgtgatatctgacgtggtaagccttgtaa 24226743  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||| | ||| |||||| ||||||||    
T  24226742 gaggtcaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgc 24226643  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaaaa 371  Q
    |||||| ||||||||||| ||  |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  24226642 aaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtatattaaaa 24226573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 13169511 - 13169772
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| |  |||||| || ||||||||||| |||||||||||||||||||||  ||||||| |||||| | |||||||||||| |||||    
T  13169511 caattttctgaaaatccaccaatttggtcattggcaattttatgtaaatcaatcaatttggtccctgcttgcgtgacatctaacgtggtaagccatgtaa 13169610  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||||||||||||||||    
T  13169611 gaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgc 13169710  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||| |||| ||  |||||||||||||||||| ||||||||||||||||||||    
T  13169711 aaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 13169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 103 - 364
Target Start/End: Complemental strand, 37114202 - 37113940
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||  ||||||| || ||| ||||||||||||||||||||    
T  37114202 caattttctgaaaatccatcaatttgatcattggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagccttgtaa 37114103  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||    |||||||||||||||||||    
T  37114102 gaggttaatgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaatttagggactaaatagatatttcgc 37114003  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||| | ||| ||||| |    |||||| |||||||||| |||||||||||||||||||||    
T  37114002 aaaattcagggatgaatttgaccaattttttaaaattcaaggacgaatttgaggtattagtct 37113940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 103 - 360
Target Start/End: Complemental strand, 39857906 - 39857648
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||  || |||| |||||| |||||||||||||| |||||    
T  39857906 caattttctgaaaatccatcaatttggtccttggcaattttatgtaaatcaatcaatttggtccctgtttgcgtgacatctgacgtggtaagccatgtaa 39857807  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||||||||||||||||    
T  39857806 gaggttaacgttacacgtcacctcggttaacagaccaacttaacggagggactgatttgattgacattttgtaaattctgggactaaatagatatttcgc 39857707  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||| | ||||||||| |   ||||||| |||||||||| |||||||||||||||||    
T  39857706 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtatta 39857648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 103 - 359
Target Start/End: Complemental strand, 35691688 - 35691431
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  35691688 caattttctgaaaatccatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaagccttgtaa 35691589  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||| |||||||||||||||||||| |||  | ||| |||||||||||  ||||||||||||||| | ||| |||||| ||||||||    
T  35691588 gaggttaacgttacacgccacctccgttaacagaccaatttagtgaagggactgatttgattgacattttgtaaattcaaggacaaaatagctatttcgc 35691489  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatt 359  Q
    ||||||||  |||||||| |   |||||||||||||||||| ||||||||||||||||    
T  35691488 aaaatttagagacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtatt 35691431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 182 - 365
Target Start/End: Complemental strand, 46437288 - 46437105
Alignment:
Q  182 tgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcga 281  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||| |    
T  46437288 tgacgtggtaagctttgtaagaggttaacgttacacgtcacctccgttaacagaccaacttaacggagggactgatttggttgacattttgtaaattcaa 46437189  T
Q  282 tgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
     ||| |||||| |||||||||||||| || |||||||| || ||||||||||||||||||| ||||||||||||||||||||||    
T  46437188 ggacaaaatagctatttcgcaaaattcaacgacgaatttggctgatttttgaaaattcaaggacgaatttgaggtattagtcta 46437105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 103 - 360
Target Start/End: Original strand, 6605225 - 6605483
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||| ||||||||||||||||||||||||| |||  ||||||  || ||| ||||||||||||||||||||    
T  6605225 caattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttagtccctgcttgtgtggcatctgacgtggtaagccttgtaa 6605324  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||| ||||||||||||||||||||| ||||| |||||||||||   ||||||||||||||   |||||||||| ||||||||    
T  6605325 gaggttaacgttacacgtcacatccgttaacagaccaacttaatggagggactgatttgattggcattttgtaaattcagggactaaatagctatttcgc 6605424  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||| | | || |||| |   ||||||| |||||||||| || ||||||||||||||    
T  6605425 aaaattcaggaacaaatttgaccgattttttaaaattcaaggacaaatttgaggtatta 6605483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 35403413 - 35403708
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| |||||| |||||| |||||||  |    
T  35403413 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaaccaatcagtttggtccct 35403512  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   |||||||||||||||||||| ||||| |||||||||| |||||||||||  |||    
T  35403513 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacataccaatttaacggagggactgatttgattgaca 35403612  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  35403613 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttgaggtattagtc 35403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 103 - 365
Target Start/End: Complemental strand, 34775259 - 34774996
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| |||||||| || |||||  |||||| |||||||||||||||||||||||||||||  ||||||| || ||| |||||||||||| | |||||    
T  34775259 caattttatgaaaatccatcaatttagtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagtcatgtaa 34775160  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||  | |||||||||||||   |||||||||| ||||| ||    
T  34775159 gaggttaacgttacacgtcacctccgttaacataccaacttaacggagggactgatttgattgatattttgtaaattcagggactaaatagctattttgc 34775060  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||| | | | ||||| |   ||||||| |||||||||  ||||||||||| ||||||||||    
T  34775059 aaaattcatgaatgaatttgaccgattttttaaaattcaaagacgaatttgagatattagtcta 34774996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 69 - 370
Target Start/End: Complemental strand, 35402264 - 35401962
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||  ||||||| |||||| || ||||| || |||||  ||||| | |||||| ||||||| ||||| |||||||  |    
T  35402264 caattttctgaaaatccatcaatttagtccttgaaaattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaattaatcagtttggtccct 35402165  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||| |||| ||| ||||||| ||||| |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| |||||||||||  |||    
T  35402164 gcttacatggcatctgacgtgataagctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaatttaacggagggactgatttgattgaca 35402065  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctatt 367  Q
    ||||||||||||   |||||| | |||||||||||||||| | ||||||| |  |  ||||||| |||||||||| ||||||||||| ||||||||| ||    
T  35402064 ttttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttgagatattagtctttt 35401965  T
Q  368 aaa 370  Q
    |||    
T  35401964 aaa 35401962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 137 - 360
Target Start/End: Original strand, 48227803 - 48228027
Alignment:
Q  137 caattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacaga 235  Q
    |||||||||| ||||  ||||||||||||  ||||||| || ||| ||||||||||||| |||||||||||||||  ||||||||||||||||||||| |    
T  48227803 caattttctgaaaattcatcaatttggtccctgcttgcgtggcatctgacgtggtaagcattgtaagaggttaacgttacacgtcacctccgttaacaca 48227902  T
Q  236 ccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaa 335  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||   ||| ||||||||||||||||||||| || |||||||| |   ||||||| |||    
T  48227903 ccaacttaatggagggactgatttgattgacattttgtaaattcagggacaaaatagatatttcgcaaaattcaaagacgaatttgaccgattttttaaa 48228002  T
Q  336 attcaagaacgaatttgaggtatta 360  Q
    ||||||  |||||||||||||||||    
T  48228003 attcaaagacgaatttgaggtatta 48228027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 69 - 279
Target Start/End: Complemental strand, 29995172 - 29994961
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  |    
T  29995172 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccct 29995073  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || |||||||||||| |||| |||| |||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||||  |||    
T  29995072 gcttgcgtggcatatgacgtggaaagctttgtcagaggttaatgttacacgtcacctccgttaacagaccaacttaacggagggactgatttgattgaca 29994973  T
Q  268 ttttgtaaattc 279  Q
    ||||||||||||    
T  29994972 ttttgtaaattc 29994961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 196 - 363
Target Start/End: Complemental strand, 38549714 - 38549547
Alignment:
Q  196 ttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagata 295  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| || ||||||||||    
T  38549714 ttgtaagaggttaacggtacacgtcaccttcgttaacagaccaacttaacgaagggactgatttgatggacattttgtaaattcgaggattaaatagata 38549615  T
Q  296 tttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||| ||||||| | ||||||| | || ||||||||||||||||||| |||||||| |||||||||||    
T  38549614 tttcacaaaattcagggacgaacttggctgatttttgaaaattcaaggacgaatttaaggtattagtc 38549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 22155686 - 22155936
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcatgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||   | ||| ||        ||||| ||||||||||||    
T  22155686 caattttctgaaaatccataaatttggtccttggcaattttctgtaaatcaattaatttggtc---cctgcttg--------cgtggcaagccttgtaag 22155774  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaa-cggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||||||||  ||||||||||||||||||||||| |||||||| |||||| |||||||||||  |||||||||||||||   ||| |||||| ||||| ||    
T  22155775 aggttaacgttacacgtcacctccgttaacagagcaacttaaacggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgc 22155874  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||||| ||  |||||||||||||||||| ||||| || |||||||||||    
T  22155875 aaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 22211601 - 22211851
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtcatgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||||||| |||||||||   | ||| ||        ||||| ||||||||||||    
T  22211601 caattttctgaaaatccatcaatttggtccttggcaattttctgtaaatcaattaatttggtc---cctgcttg--------cgtggcaagccttgtaag 22211689  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaa-cggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    ||||||||  ||||||||||||||||||||||| |||||||| |||||| |||||||||||  |||||||||||||||   ||| |||||| ||||| ||    
T  22211690 aggttaacgttacacgtcacctccgttaacagagcaacttaaacggagggactgatttgattgacattttgtaaattcagggacaaaatagctattttgc 22211789  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||||| ||  |||||||||||||||||| ||||| || |||||||||||    
T  22211790 aaaattcatggacgaatttggccgatttttgaaaattcaaggacgaagtttaggtattagtc 22211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 69 - 372
Target Start/End: Original strand, 20479514 - 20479817
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  |||||   |||||| ||||||||||||| |||||||  |    
T  20479514 caattttctgaaaatccatcaatttggtccttgg-aattttgtgtaaatccatcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccct 20479612  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||| |||||| |||||||||| ||| |||||||  |||    
T  20479613 gcttgcgtgtcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacggaccaaattaacggagggactaatttgattgaca 20479712  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctatt 367  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||  ||    
T  20479713 ttttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcattt 20479812  T
Q  368 aaaat 372  Q
    |||||    
T  20479813 aaaat 20479817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 133 - 363
Target Start/End: Original strand, 45361134 - 45361365
Alignment:
Q  133 ttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaa 231  Q
    ||||||||||| || ||||  ||||||||||||  ||||||| |||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||    
T  45361134 ttggcaattttatgaaaatacatcaatttggtccctgcttgcgtgacatctgacgtggtaagccatgtaagaggttaacgttacacgtcacctccgttaa 45361233  T
Q  232 cagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgattttt 331  Q
    ||||||||||||||||||| |||||||||||  ||||||||||| ||| | |||||||||  ||||| |||||||| | | || || | |    ||||||    
T  45361234 cagaccaacttaacggagggactgatttgattgacattttgtaagttcaaggactaaataactattttgcaaaattcaggaacaaaattgacccattttt 45361333  T
Q  332 gaaaattcaagaacgaatttgaggtattagtc 363  Q
     |||||||||| | ||||||||||||||||||    
T  45361334 taaaattcaaggaagaatttgaggtattagtc 45361365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 103 - 360
Target Start/End: Complemental strand, 37791915 - 37791657
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||| |||||||| || ||| | |||||||||||| |||||||||||||||||||||  ||| |||||| ||| ||||||||||||||||||||    
T  37791915 caattttctgtaaatcaatcaagttggttcttggcaattttttgtaaatcaatcaatttggtccctgcctgcatggcatctgacgtggtaagccttgtaa 37791816  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    | |||||||  |||||||||||||||||||||  ||||||||| ||| | | |||||||||  |||||||  |||||    |||||||||||||||| ||    
T  37791815 gtggttaacggtacacgtcacctccgttaacatgccaacttaatggatggattgatttgattgacattttaaaaatttagggactaaatagatatttggc 37791716  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||||  ||| ||||| || |||||||| |||||| ||  ||||| || ||||||||    
T  37791715 aaaatttggggatgaatttggctgattttttaaaatttaaagacgaagtttaggtatta 37791657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 146 - 360
Target Start/End: Complemental strand, 27664648 - 27664433
Alignment:
Q  146 gtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaa 244  Q
    |||||| ||||| |||||||  ||||||| || ||| ||||||||||||| |||| ||||||||||  ||||||||||||||||||||| ||||||||||    
T  27664648 gtaaattaatcagtttggtccctgcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacacgtcacctccgttaacataccaacttaa 27664549  T
Q  245 cggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaa 344  Q
    |||||| |||||||||||  |||||||||||||||   |||||| | ||||||| |||||||| | |||| || | ||  ||||||| |||||||||| |    
T  27664548 cggagggactgatttgattgacattttgtaaattcagggactaatttgatattttgcaaaattcagggacaaaattggccgatttttcaaaattcaagga 27664449  T
Q  345 cgaatttgaggtatta 360  Q
    | ||||||||||||||    
T  27664448 ctaatttgaggtatta 27664433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 103 - 245
Target Start/End: Complemental strand, 38472521 - 38472378
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||||||  || |||| || ||| |||||||| |||||||||||    
T  38472521 caattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttggtctctgtttgcgtggcatttgacgtggcaagccttgtaa 38472422  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaac 245  Q
    |||||||||  |||||||||||||||||||||||||||||||||    
T  38472421 gaggttaacgttacacgtcacctccgttaacagaccaacttaac 38472378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 123 - 363
Target Start/End: Original strand, 77862 - 78103
Alignment:
Q  123 aatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtca 221  Q
    |||||| ||||||| |||||| ||||||||||||| |||||||  ||||||||||| || |||| |||||||| ||||   ||||||||  |||| || |    
T  77862 aatttggtccttggaaattttgtgtaaatcaatcagtttggtccctgcttgcatgaaatctgacatggtaagctttgtcgaaggttaacgttacatgtaa 77961  T
Q  222 cctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcg 321  Q
    |||| |||||||||||||||||||||||| |||||||||||   ||||||||||||||   ||| || | ||||||| |||||||| | ||||||| | |    
T  77962 cctctgttaacagaccaacttaacggagggactgatttgattggcattttgtaaattcagggacaaatttgatattttgcaaaattcagggacgaaattg 78061  T
Q  322 gttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |  ||||||| |||||||||  ||||||||||||||||||||    
T  78062 gccgatttttcaaaattcaaagacgaatttgaggtattagtc 78103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 99 - 363
Target Start/End: Complemental strand, 23904861 - 23904583
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaa----- 192  Q
    |||||||||||||||||||  || |||||| ||||||  |||||||| |||||||||||||||||||  ||||||| |||||| |||||||||||         
T  23904861 ttgacaattttctgaaaattcatcaatttggtccttga-aattttctataaatcaatcaatttggtccctgcttgcgtgacatctgacgtggtaaacctt 23904763  T
Q  193 ---------gccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatg 283  Q
             ||||||||||||||||||  |||||||||||| | ||||| ||| ||||||| ||||| |||||||||||  |||||||||||||||   |    
T  23904762 gtaagaggagccttgtaagaggttaacgttacacgtcaccttccttaacggactaacttaatggagggactgatttgattgacattttgtaaattcatgg 23904663  T
Q  284 actaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||| ||||| |||||||| |  |||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  23904662 actaaatagctattttgcaaaattcagagacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 23904583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 168 - 354
Target Start/End: Original strand, 13039536 - 13039722
Alignment:
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| | |||||||||| |||||||| |||||||  || |||||||||| |||||||| ||||||||||  | | |||||||||||  |||    
T  13039536 gcttgcgtgacatctaacgtggtaagtcttgtaagcggttaacggtaaacgtcacctctgttaacaggccaacttaacatatggactgatttgattgaca 13039635  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgag 354  Q
    ||||| ||||||   |||||||||| |||||||||||||||| ||||||||| | |||||||||||||||||||| ||||| |||||    
T  13039636 ttttgaaaattcagggactaaatagttatttcgcaaaatttagggacgaatttgattgatttttgaaaattcaaggacgaacttgag 13039722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 38549826 - 38549714
Alignment:
Q  43 aggagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattt 142  Q
    |||||||| || | |||| |||||||||||||||| | |||||||||||||| |||||| |||| |||||||||||||| |||||| | |||||||||||    
T  38549826 aggagaaaaagccattgggaattttgcaattttctaaaaatcaatcaatttggtccttggcaatattctgaaaatcaatgaatttggttcttggcaattt 38549727  T
Q  143 tctgtaaatcaat 155  Q
    |||||||||||||    
T  38549726 tctgtaaatcaat 38549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 37796225 - 37796302
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| || ||||||||||||||    
T  37796225 gactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggacaaatttgaggtatta 37796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 274 - 365
Target Start/End: Original strand, 39859264 - 39859355
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    |||||| | ||||||||||||||||||||||||| | |||| |||| ||  ||||||| |||||||||| ||||||||||||||||||||||    
T  39859264 aaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgattttttaaaattcaaggacgaatttgaggtattagtcta 39859355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 47386253 - 47386333
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||| ||||||||||||||| ||||||||||| |  |||||||| |||||| ||| ||||||||||||||||||||    
T  47386253 gactaaataaatatttcgcaaaattcaaggacgaatttgactgattttttaaaattaaaggacgaatttgaggtattagtc 47386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 24228453 - 24228530
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||||||||||||||||||| | ||||||||| ||   |||||| |||||||||||||||| |||||||||||    
T  24228453 gactaaatagatatttcgcaaaattcagggacgaatttggccaattttttaaaattcaagaacgaaattgaggtatta 24228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 48311641 - 48311801
Alignment:
Q  182 tgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcga 281  Q
    |||||||||||| ||| ||||||||||| | |||| ||||||||  ||||||  ||||||||||||| | ||  |||||||   |||||| |||||||      
T  48311641 tgacgtggtaagtcttataagaggttaaaagtacatgtcacctctcttaacaacccaacttaacggacggacaaatttgattgccattttataaattcag 48311740  T
Q  282 tgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaag 342  Q
     ||  || |||| ||||||||||||||||||| ||||| |  |||||||| ||||||||||    
T  48311741 ggatgaattagacatttcgcaaaatttaaggatgaatttgactgattttttaaaattcaag 48311801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 46437896 - 46437834
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtc 165  Q
    |||||||||||||||| || |||||| ||||| ||||||||| ||||||||||||||||||||    
T  46437896 caattttctgaaaatccatcaatttggtcctttgcaattttcagtaaatcaatcaatttggtc 46437834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 38474178 - 38474267
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||||||||||||||||||||| | ||||||||| |   ||||||| ||||||| || || |||||||||||||||||    
T  38474178 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattcgaggactaatttgaggtattagtc 38474267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 283 - 364
Target Start/End: Original strand, 46439542 - 46439623
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||||||||||||||||||||||||| ||| | || | | ||||||| |||||||||  ||||||||||| |||||||||    
T  46439542 gactaaatagatatttcgcaaaatttaaagacaagtttgatcgatttttaaaaattcaatgacgaatttgagatattagtct 46439623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 77494 - 77534
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  77494 attgaagctctctcacatcatcattgtacatagagcttgaa 77534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20479157 - 20479197
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20479157 attgaagctctctcacatcatcattgtacatagagcttgaa 20479197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 22211600 - 22211660
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||||| |||||||||| |||||||||||||||    
T  22211600 gcaattttctgaaaatccatcaatttggtccttggcaattttctgtaaatcaattaatttg 22211660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 27666109 - 27666189
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||| ||||||||||||||||||||    
T  27666109 gactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtc 27666189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 30940469 - 30940549
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||||||||| |||||| |  |||||||| ||  ||||||| ||||||||||||| ||||| |||||||||||    
T  30940469 gactaaatagatatttcgtaaaattaagagacgaatttggccgattttttaaaattcaagaacaaatttaaggtattagtc 30940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 284 - 364
Target Start/End: Original strand, 37115571 - 37115651
Alignment:
Q  284 actaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||||||||||| |||||||| | | ||||||| |  |||||||| |||||||||  |||||||||||||||||||||    
T  37115571 actaaatagatattttgcaaaattcaggaacgaatttgactgattttttaaaattcaatgacgaatttgaggtattagtct 37115651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 38472522 - 38472462
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||    
T  38472522 gcaattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttg 38472462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38550132 - 38550092
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38550132 attgaagctctctcacatcatcattgtacatagagcttgaa 38550092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 47384556 - 47384496
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||||||||||||| |||||||||||||| || |||||||| ||||||    
T  47384556 gcaattttctgaaaatcaatcaatttggtccttgacaattttatgtaaatcaatcaatttg 47384496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 6605224 - 6605283
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaattt 127  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||| |||||||| |||||    
T  6605224 gcaattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaattt 6605283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 13018103 - 13018036
Alignment:
Q  293 atatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||| |||||| |||||||||| || |||||||| |||||||||| | |||||||||||||||    
T  13018103 atatttcgctaaatttgaggacgaatttggctgattttttaaaattcaaggatgaatttgaggtatta 13018036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 341
Target Start/End: Complemental strand, 13168200 - 13168142
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaa 341  Q
    ||||||||||||||||||||||||| ||||||||||| ||  ||||||| |||||||||    
T  13168200 gactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaa 13168142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 34776959 - 34777045
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaa 369  Q
    ||||||||||||||||||||||||| | | | ||||| ||   |||||| |||||| ||||||||||||||||||||| || |||||    
T  34776959 gactaaatagatatttcgcaaaattcaggaatgaatttggccaattttttaaaatttaagaacgaatttgaggtattaatcaattaa 34777045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 38549800 - 38549739
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggt 164  Q
    ||||||||| ||||||||| |||||| ||||||||||| ||||| |||||||| ||||||||    
T  38549800 caattttctaaaaatcaatcaatttggtccttggcaatattctgaaaatcaatgaatttggt 38549739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 274 - 363
Target Start/End: Complemental strand, 45359425 - 45359336
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||||||||||||||||||||| ||||||| ||| |   ||||||| |||||||| | || ||||| |||||||||||    
T  45359425 aaattcaaggactaaatagatatttcgcaaaattcaaggacggatttgaccgattttttaaaattcatggacaaatttaaggtattagtc 45359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 56410 - 56330
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||||| |  |  ||||||| |||||||||| ||||||||||||||||||||    
T  56410 gactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttgaggtattagtc 56330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 22155685 - 22155745
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| || |||||| |||||| |||||||||| |||||||||||||||    
T  22155685 gcaattttctgaaaatccataaatttggtccttggcaattttctgtaaatcaattaatttg 22155745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 24226843 - 24226783
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||  |||||||| ||||||    
T  24226843 gcaattttctgaaaatccatcaatttggtccttgacaattttctctaaatcaatcaatttg 24226783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34775650 - 34775610
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  34775650 attgaagctctctcacctcatcattgtacatagagcttgaa 34775610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 35691689 - 35691629
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||||| |||||||||| |||||||| ||||||    
T  35691689 gcaattttctgaaaatccatcaatttggtccttggcaattttctgtaaatcaatcaatttg 35691629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35692037 - 35691997
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  35692037 attgaagctttctcacatcatcattgtacatagagcttgaa 35691997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 37791928 - 37791856
Alignment:
Q  56 gttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||||||||||||||  |||||||||| ||| | |||| ||||||| || |||||||| ||||||    
T  37791928 gttggaaattttgcaattttctgtaaatcaatcaagttggttcttggcaattttttgtaaatcaatcaatttg 37791856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45360773 - 45360813
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  45360773 attgaagctctctcacctcatcattgtacatagagcttgaa 45360813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 46438246 - 46438206
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  46438246 attgaagctctctcacctcatcattgtacatagagcttgaa 46438206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48851158 - 48851118
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  48851158 attgaagctctctcacatcatcattgtgcatagagcttgaa 48851118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 23906295 - 23906356
Alignment:
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||| ||||||||| ||  ||||||| |||||||||| | ||||||||||||||||||    
T  23906295 aaaatttagggacgaatttggccgattttttaaaattcaaggaggaatttgaggtattagtc 23906356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24227158 - 24227118
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||  ||||||||||||||||||||||||    
T  24227158 attgaagctctctcatctcatcattgtacatagagcttgaa 24227118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 34775260 - 34775200
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||| ||| |||| ||||||||  ||||||||||||||||| |||||||| ||||||    
T  34775260 gcaattttatgaaaatccatcaatttagtccttgacaattttctgtaaatcaatcaatttg 34775200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 37114203 - 37114143
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| || ||| |||||||||| |||||||| ||||||    
T  37114203 gcaattttctgaaaatccatcaatttgatcattggcaattttctgtaaatcaatcaatttg 37114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37114540 - 37114500
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  37114540 attgaagctctctcacctcatcattgtacatagagtttgaa 37114500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 39857907 - 39857847
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||||| ||||||| || |||||||| ||||||    
T  39857907 gcaattttctgaaaatccatcaatttggtccttggcaattttatgtaaatcaatcaatttg 39857847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 29996567 - 29996638
Alignment:
Q  292 gatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||||||| | |||| || | |   ||||||| |||||||||| ||||||||||||||||||||    
T  29996567 gatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtc 29996638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 165
Target Start/End: Original strand, 13036358 - 13036387
Alignment:
Q  136 gcaattttctgtaaatcaatcaatttggtc 165  Q
    ||||||||||||||||||||||||||||||    
T  13036358 gcaattttctgtaaatcaatcaatttggtc 13036387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 29994944 - 29994907
Alignment:
Q  325 gatttttgaaaattcaagaacgaatttgaggtattagt 362  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  29994944 gatttttcaaaattcaaggacgaatttgaggtattagt 29994907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6604877 - 6604916
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  6604877 attgaagctctctcacctca-cattgtacatagagcttgaa 6604916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22155337 - 22155377
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||| | |||||| ||||||||||||||||||||||||    
T  22155337 attgaagttatctcacctcatcattgtacatagagcttgaa 22155377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22211252 - 22211292
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||| | |||||| ||||||||||||||||||||||||    
T  22211252 attgaagttatctcacctcatcattgtacatagagcttgaa 22211292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38472862 - 38472822
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||  |||| |||||||||||||||||||    
T  38472862 attgaagctctctcatctcataattgtacatagagcttgaa 38472822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 46437897 - 46437837
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||||  |||||||| | |||||||| ||||||    
T  46437897 gcaattttctgaaaatccatcaatttggtcctttgcaattttcagtaaatcaatcaatttg 46437837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47384894 - 47384854
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||| ||||||||||||||||||| ||| ||||||||||    
T  47384894 attgaatctctctcacatcatcattgaacagagagcttgaa 47384854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 6e-82; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 130 - 363
Target Start/End: Original strand, 8541126 - 8541360
Alignment:
Q  130 tccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgt 228  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||    
T  8541126 tccttggcaattttctgtaaatcaatcaatttggtccctgcttgcatgacatctgacgtggtaagccttgtaagaggttaacgttacacatcacctccgt 8541225  T
Q  229 taacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatt 328  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||| | ||||||||||||||||||||||||| | ||||||||| ||  ||||    
T  8541226 taacagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgatt 8541325  T
Q  329 tttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||| |||||||||  ||||||||||||||||||||    
T  8541326 ttttaaaattcaatgacgaatttgaggtattagtc 8541360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 99 - 369
Target Start/End: Original strand, 28813589 - 28813862
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    |||||||||||||||||||  || |||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||| | ||||||||||||||    
T  28813589 ttgacaattttctgaaaattcatcaatttggtccttggcaattttctgtaaatcaatcaatttggtcgctgcttgcgtgacatctaacgtggtaagcctt 28813688  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  ||||||||||||||||||||| ||||| |||||||||| |||||||||||  |||||||||||||||   |||||||||||||||    
T  28813689 gtaagaggttaacgttacacgtcacctccgttaacacaccaatttaacggagggactgatttgatttacattttgtaaattcagggactaaatagatatt 28813788  T
Q  298 tcgcaaaatttaaggacgaattcggttga--tttttgaaaattcaagaacgaatttgaggtattagtctattaa 369  Q
    |||||||||| ||||||||||| ||   |  |||||  ||||||||| |||||||||||||||||||| |||||    
T  28813789 tcgcaaaattcaaggacgaatttggccaatttttttttaaattcaaggacgaatttgaggtattagtcaattaa 28813862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 12738564 - 12738825
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||  ||||||| || ||| |||||||||||| | |||||    
T  12738564 caattttctgaaaatccatcaatttggtccttggcaattttatgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagtcatgtaa 12738663  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||   |||||||||||||||||||    
T  12738664 gaggttaacgttacacgtcacctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgc 12738763  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | | ||||||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  12738764 aaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12738825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 12801387 - 12801648
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||||||||||| |||||||||||||||||||||  ||||||| || ||| |||||||||||| | |||||    
T  12801387 caattttctgaaaatccatcaatttggtccttggcaattttatgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagtcatgtaa 12801486  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||   |||||||||||||||||||    
T  12801487 gaggttaacgttacacgtcacctccgttaacaaaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaaatagatatttcgc 12801586  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | | ||||||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  12801587 aaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 12801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 30464161 - 30463900
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| |||||| |||||||||||||||||||||||||||||  ||||||| |||||| |||| |||||||||||||||    
T  30464161 caattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttggtccctgcttgcgtgacatctgacatggtaagccttgtaa 30464062  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||||||||| |||||||||||||||| |||| |||||||||||  | |||||||||||||   |||||||||||||||||||    
T  30464061 gaggttaacgttacacgtcacctccgtaaacagaccaacttaacagagggactgatttgattgatattttgtaaattcagggactaaatagatatttcgc 30463962  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||||| |   ||||||| |||||||||| ||||||||||||||||||||    
T  30463961 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgaggtattagtc 30463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 99 - 360
Target Start/End: Original strand, 28821915 - 28822176
Alignment:
Q  99 ttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagcctt 197  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||  ||||||| || ||| |||| |||||||||||    
T  28821915 ttgacaattttctgaaaatccatcaatttga-ccttggcaattttctgtaaatcaatcaatttggtccctgcttgcttggcatctgacatggtaagcctt 28822013  T
Q  198 gtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatt 297  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||||| |||||||||||  ||||||||||||||| | ||| ||||||  |||    
T  28822014 gtaagaggttaacgttacacgtcacttccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcaaggacaaaatagcaatt 28822113  T
Q  298 tcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    |||||||||| | ||||||||| |    |||||| |||||||||| |||||||||||||||||    
T  28822114 tcgcaaaattcagggacgaatttgacctatttttaaaaattcaaggacgaatttgaggtatta 28822176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 69 - 361
Target Start/End: Original strand, 17577729 - 17578022
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||| ||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  |    
T  17577729 caattttatgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccct 17577828  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||  ||||||||| ||||||||||||||||| |||||||||| |||||||||||  |||    
T  17577829 gcttgcgtgacatctgacgtggtaagctttgttagaggttaacgttacacgtcagctccgttaacagaccaatttaacggagggactgatttgattgaca 17577928  T
Q  268 ttttgtaaattcgatg-actaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattag 361  Q
    |||||||||||| ||| ||||| | ||||||| |||||||| | ||| ||| | ||  ||||||| |||||||||| ||||||||||||||||||    
T  17577929 ttttgtaaattc-atgaactaatttgatattttgcaaaattcagggaagaaatgggccgatttttcaaaattcaaggacgaatttgaggtattag 17578022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 32134497 - 32134231
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||| |||||||  || |||||| ||||||||||||||||||||||||||||||||||||  ||||||| || ||| ||||||| ||||| ||||||    
T  32134497 caattttatgaaaattcatcaatttggtccttggcaattttctgtaaatcaatcaatttggtccctgcttgcgtggcatctgacgtgataagctttgtaa 32134398  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaact-----taacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatat 296  Q
    |||||||||  |||||||||||||||||||||||||||||     |||| ||   |||||||||||  ||||||| |||||||   ||||||||||||||    
T  32134397 gaggttaacgttacacgtcacctccgttaacagaccaacttaacttaacagatagactgatttgattgacattttataaattcagggactaaatagatat 32134298  T
Q  297 ttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||  ||||||| || |||||||| |||||||||||||||||||||  || |||||||||||||||||    
T  32134297 tttacaaaattcaaagacgaatttggttgatttttgaaaattcaatgacaaatttgaggtattagtc 32134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 103 - 366
Target Start/End: Original strand, 34328651 - 34328919
Alignment:
Q  103 caattttctgaaaatcaattaattt-gatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagc----ct 196  Q
    |||||||||||||||| || ||||| | ||||||  ||||| || |||||||||||||||||||  ||||||| || ||| |||||||||||||    ||    
T  34328651 caattttctgaaaatccatcaattttggtccttgaaaattt-ctctaaatcaatcaatttggtccctgcttgcgtggcatctgacgtggtaagctagcct 34328749  T
Q  197 tgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatat 296  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||||||||  |||||||||||  ||||||||||||||| | ||| |||||| |||    
T  34328750 tgtaagaggttaacgttacacgtcaccaccgttaacagaccaacttaacggagcgactgatttgattgacattttgtaaattcaaggacaaaatagctat 34328849  T
Q  297 ttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    || |||||||| | ||||||||| |   |||||||||||||||||| |||||||||||||||||||||||    
T  34328850 tttgcaaaattcatggacgaatttgaccgatttttgaaaattcaaggacgaatttgaggtattagtctat 34328919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 103 - 363
Target Start/End: Original strand, 7269274 - 7269535
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    |||||||||||||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  | ||||| || ||| ||||||||||||| |||| |    
T  7269274 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccctacttgcgtggcatctgacgtggtaagctttgtca 7269373  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||||   ||||||||||| |||||||| |||||||   |||||| | ||||||||||    
T  7269374 gaggttaacgttacacgtcacctccgttaacagatcaacttaacggactgactgatttgattaacattttataaattcagggactaatttgatatttcgc 7269473  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||| |  |  ||||||| |||||||||  ||||||||||||||||||||    
T  7269474 aaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttgaggtattagtc 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 69 - 365
Target Start/End: Original strand, 21842786 - 21843083
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||| | |||| ||||||||| ||||||| |||||| || ||||| || |||||| || |||  |||||| ||||||||||||| |||||||  |    
T  21842786 caattttctaaaaatccatcaatttggtccttgaaaattttgtgtaaatccatcaatttggtcattgaaaattttgtgtaaatcaatcagtttggtccct 21842885  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   |||||||||||||||||| | |  ||||||||||||| |||||||||||  |||    
T  21842886 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtaacacgtcacctccgttaaaaaaaaaacttaacggagggactgatttgattgaca 21842985  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    ||||||||||||   |||||| | |||||||||||||||| | |||| || | |   ||||||| |||||||||| ||||||||||||||||||||||    
T  21842986 ttttgtaaattcagggactaatttgatatttcgcaaaattcatggacaaaattgaccgatttttcaaaattcaaggacgaatttgaggtattagtcta 21843083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 146 - 364
Target Start/End: Complemental strand, 2853104 - 2852885
Alignment:
Q  146 gtaaatcaatcaatttggt-catgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaa 244  Q
    |||||||||||| |||||| | ||||||| || ||| ||| ||||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||||    
T  2853104 gtaaatcaatcagtttggttcctgcttgcgtggcatctgaagtggtaagctttgtcagaggttaacgttacacgtcacctccgttaacagaccaacttaa 2853005  T
Q  245 cggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaa 344  Q
    |||||| |||||||||||  |||||||||||||||    ||||| | |||||||||||||||| | ||||||| | |   ||||||| |||||||||| |    
T  2853004 cggagggactgatttgattgacattttgtaaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaagga 2852905  T
Q  345 cgaatttgaggtattagtct 364  Q
    ||||||||||||||||||||    
T  2852904 cgaatttgaggtattagtct 2852885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 40782006 - 40782300
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  ||||| | |||||| ||||||||||||| |||||||  |    
T  40782006 caattttctgaaaatccatcaatttgatccttgg-aattttgtgtaaatccatcaatttcgtccttcgaaattttgtgtaaatcaatcagtttggtccct 40782104  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||| |||||| |||||||||| ||| |||||||  |||    
T  40782105 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacggaccaaattaacggagggactaatttgattgaca 40782204  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  40782205 ttttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 40782300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 69 - 363
Target Start/End: Complemental strand, 29620432 - 29620138
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  |||||   |||||| ||||||||||||| |||||||  |    
T  29620432 caattttctgaaaatccatcaatttggtccttgg-aattttgtgtaaatccatcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccct 29620334  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||   ||||||||||||||||||| |||||| |||||||||| ||| |||||||  |||    
T  29620333 gcttgcgtgtcatctgacgtggtaagctttgtcagaggttaacgtgacacgtcacctccgttaacggaccaaattaacggagggactaatttgattgaca 29620234  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||    
T  29620233 ttttgtaaattcagagactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtc 29620138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 165 - 367
Target Start/End: Complemental strand, 41494042 - 41493840
Alignment:
Q  165 catgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatga 264  Q
    ||||||||  |||||| ||| ||||| |||||||||||  ||||||  ||||||||| |||||||||||| ||||||||||||| | || ||||||||      
T  41494042 catgcttgtgtgacatctgatgtggtgagccttgtaagcagttaacggtacacgtcatctccgttaacaggccaacttaacggatggacggatttgattg 41493943  T
Q  265 acattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||||| | ||||   ||||||||||||||||| |||||||| |||||||||| || ||||||||||||||||||| ||||| ||||||||||| |||    
T  41493942 acattttgaatattcatggactaaatagatatttcacaaaatttgaggacgaatttggctgatttttgaaaattcaaggacgaagttgaggtattactct 41493843  T
Q  365 att 367  Q
    |||    
T  41493842 att 41493840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 104 - 365
Target Start/End: Complemental strand, 42471808 - 42471546
Alignment:
Q  104 aattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaag 202  Q
    ||||||||||||||| || |||||| ||||||| |||||| |||||||| |||||||| |||  ||||||| || ||| |||||||||| || |||| ||    
T  42471808 aattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttagtccctgcttgcgtggcatctgacgtggtacgctttgtcag 42471709  T
Q  203 aggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatg-actaaatagatatttcgc 301  Q
    ||||||||   |||||||||||||||||||||||||| ||||| |||| ||| |||||||  ||||||||||||||| ||| ||||  | |||||||||     
T  42471708 aggttaacgtgacacgtcacctccgttaacagaccaatttaacagagggactaatttgattgacattttgtaaattc-atgtactattttgatatttcga 42471610  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtcta 365  Q
    | |||| | ||||||| | ||  ||||||| |||||||||| || | |||||||||||||||||    
T  42471609 ataattcagggacgaaattggccgatttttcaaaattcaaggactattttgaggtattagtcta 42471546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 182 - 319
Target Start/End: Original strand, 27077375 - 27077512
Alignment:
Q  182 tgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcga 281  Q
    |||| ||| ||||||||| ||||||||||| |||||||||||||| ||||||  ||||||||||||||| || ||||||||  |||||| ||||||||      
T  27077375 tgacatggcaagccttgtgagaggttaacagtacacgtcacctccattaacatgccaacttaacggagggaccgatttgattgacatttggtaaattcag 27077474  T
Q  282 tgactaaatagatatttcgcaaaatttaaggacgaatt 319  Q
     ||  |||||||||||| | ||||||| ||||||||||    
T  27077475 ggataaaatagatattttgaaaaatttgaggacgaatt 27077512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 8539755 - 8539675
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| ||| ||||||| | ||||||||| |||||||||| ||||||||||||||||||||    
T  8539755 gactaaatagatatttcgcaaaattcaagaacgaatttgattgatttttcaaaattcaaggacgaatttgaggtattagtc 8539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 363
Target Start/End: Original strand, 36057659 - 36057737
Alignment:
Q  285 ctaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||| | ||||||||| ||  |||||||||||||||||| ||||||||||||||||||||    
T  36057659 ctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttgaggtattagtc 36057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 17574398 - 17574318
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| | ||||||||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  17574398 gactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttgaggtattagtc 17574318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 283 - 363
Target Start/End: Complemental strand, 7267923 - 7267843
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||||||||||||||| |  |||||||| ||  ||||||| |||||||||| ||||||||||||||||||||    
T  7267923 gactaaatagatatttcgcaaaattcagtgacgaatttggacgattttttaaaattcaaggacgaatttgaggtattagtc 7267843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 283 - 366
Target Start/End: Complemental strand, 34327715 - 34327632
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    ||||||||||||||||||||||||| |  |||||||| ||   ||||| ||||||||||| |||||||||||||||||||||||    
T  34327715 gactaaatagatatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaaggacgaatttgaggtattagtctat 34327632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 103 - 165
Target Start/End: Original strand, 2181524 - 2181586
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtc 165  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||| |||||||||||||    
T  2181524 caattttctgaaaatccatcaatttggtccttggcaattttctgtaaattaatcaatttggtc 2181586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 24540057 - 24539933
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggt-cat 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||  |||||| ||||||||||||| |||||| | |    
T  24540057 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttgaaaattttgtgtaaatcaatcagtttggtccct 24539958  T
Q  168 gcttgcatgacatatgacgtggtaa 192  Q
    |||||| || ||| |||||||||||    
T  24539957 gcttgcgtggcatctgacgtggtaa 24539933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7268933 - 7268973
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7268933 attgaagctctctcacatcatcattgtacatagagcttgaa 7268973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21842439 - 21842479
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21842439 attgaagctctctcacatcatcattgtacatagagcttgaa 21842479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 30464162 - 30464102
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||| |||||||| ||||||    
T  30464162 gcaattttctgaaaatccatcaatttggtccttgacaattttctgtaaatcaatcaatttg 30464102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40781666 - 40781706
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  40781666 attgaagctctctcacatcatcattgtacatagagcttgaa 40781706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42472170 - 42472130
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42472170 attgaagctctctcacatcatcattgtacatagagcttgaa 42472130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 2179864 - 2179786
Alignment:
Q  286 taaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||||||||||| ||||||| | ||||||||| |   ||||||| |||||||||| || ||||||||||||||||||    
T  2179864 taaatagatatttcacaaaattcagggacgaatttgaccgattttttaaaattcaaggacaaatttgaggtattagtct 2179786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 353
Target Start/End: Original strand, 43492142 - 43492212
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttga 353  Q
    ||||||||||||||||||||||||| | ||| ||| | || ||||||||||||||| ||| ||||||||||    
T  43492142 gactaaatagatatttcgcaaaattcagggatgaacttggctgatttttgaaaatttaagtacgaatttga 43492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17575375 - 17575412
Alignment:
Q  4 gaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17575375 gaagctctctcacatcatcattgtacatagagcttgaa 17575412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17576095 - 17576132
Alignment:
Q  4 gaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17576095 gaagctctctcacatcatcattgtacatagagcttgaa 17576132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17577406 - 17577443
Alignment:
Q  4 gaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17577406 gaagctctctcacatcatcattgtacatagagcttgaa 17577443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 18625052 - 18625129
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtatta 360  Q
    ||||||||||||||||| ||||||| | |||||||||  | ||||   |||||||||||| |||||||||||||||||    
T  18625052 gactaaatagatatttcacaaaattcagggacgaatttagctgatcagtgaaaattcaaggacgaatttgaggtatta 18625129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 363
Target Start/End: Original strand, 24541256 - 24541336
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | |||||||||||||||| | ||||||| | ||  ||||||| |||||||||  ||||||||||||||||||||    
T  24541256 gactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttgaggtattagtc 24541336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29620789 - 29620749
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  29620789 attgaaactctctcacatcatcattgtacatagagcttgaa 29620749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 274 - 363
Target Start/End: Original strand, 30468315 - 30468404
Alignment:
Q  274 aaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||| | ||||||||||||||||||||||||| |  |||||||| |    |||||| |||||||||| ||||| ||||||||| ||||    
T  30468315 aaattcaaggactaaatagatatttcgcaaaattgagagacgaatttgaccaattttttaaaattcaaggacgaaattgaggtatcagtc 30468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2181208 - 2181248
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  2181208 attgaagctctctcacctcatcattgtacatagatcttgaa 2181248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 2181523 - 2181583
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||||| |||||||||| |||| ||| ||||||    
T  2181523 gcaattttctgaaaatccatcaatttggtccttggcaattttctgtaaattaatcaatttg 2181583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8540781 - 8540821
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||| ||||||||    
T  8540781 attgaagctctctcacctcatcattgtacataaagcttgaa 8540821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 12738563 - 12738623
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||||| ||||||| || |||||||| ||||||    
T  12738563 gcaattttctgaaaatccatcaatttggtccttggcaattttatgtaaatcaatcaatttg 12738623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 12801386 - 12801446
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| |||| ||||||||| |||||| ||||||| || |||||||| ||||||    
T  12801386 gcaattttctgaaaatccatcaatttggtccttggcaattttatgtaaatcaatcaatttg 12801446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30464552 - 30464512
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  30464552 attgaagctctctcaccttatcattgtacatagagcttgaa 30464512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 2854412 - 2854451
Alignment:
Q  325 gatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  2854412 gatttttcaaaattcaaggacgaatttgaggtattagtct 2854451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 19998360 - 19998430
Alignment:
Q  194 ccttgtaagaggttaaca--atacacgtcacctccgttaacagaccaacttaacggaggtactgatttgat 262  Q
    |||||| |||||||||||  |||||| |||||||||| ||||  ||||||||||||||| || ||||||||    
T  19998360 ccttgtgagaggttaacagtatacacatcacctccgtcaacatgccaacttaacggagggaccgatttgat 19998430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 28813593 - 28813652
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    ||||||||||| |||  ||||||||| |||||| |||||||||| |||||||| ||||||    
T  28813593 caattttctgaaaattcatcaatttggtccttggcaattttctgtaaatcaatcaatttg 28813652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 32134845 - 32134806
Alignment:
Q  2 ttgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  32134845 ttgaagctctctcacctcatcattgtacgtagagcttgaa 32134806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18624055 - 18624015
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||| ||||| ||||||| |||||||    
T  18624055 attgaagctctctcacatcttcattatacatagggcttgaa 18624015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34328310 - 34328350
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||| | ||||||||    
T  34328310 attgaagctctctcacctcatcattgtacacaaagcttgaa 34328350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41494444 - 41494404
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||| ||||||||||| ||||||||||||| ||||||    
T  41494444 attgaagcactctcacatcaccattgtacatagaacttgaa 41494404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 128; Significance: 8e-66; HSPs: 3)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 103 - 364
Target Start/End: Original strand, 1385 - 1645
Alignment:
Q  103 caattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tgcttgcatgacatatgacgtggtaagccttgtaa 201  Q
    ||||||||||||| || || |||||| ||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||    
T  1385 caattttctgaaattccatcaatttggtccttggcaattttctgtaaatcaatcaatttggtctctgcttgcgtgacatctgacgtggtaagccttgtaa 1484  T
Q  202 gaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgc 301  Q
    |||||||||  |||||||||  ||||||||||||||||||||||||||| ||||||||||   |||||||||||||||   |||||||| | |||||  |    
T  1485 gaggttaacgttacacgtca--tccgttaacagaccaacttaacggagggactgatttgaatgacattttgtaaattcagggactaaattgctatttttc 1582  T
Q  302 aaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtct 364  Q
    |||||| | ||||||||| |   ||||||| |||||||||| |||||||||| ||||||||||    
T  1583 aaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttgatgtattagtct 1645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 993 - 1033
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  993 attgaagctctctcacctcatcattgtacatagagcttgaa 1033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 1384 - 1444
Alignment:
Q  68 gcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttg 128  Q
    |||||||||||| | || ||||||||| |||||| |||||||||| |||||||| ||||||    
T  1384 gcaattttctgaaattccatcaatttggtccttggcaattttctgtaaatcaatcaatttg 1444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 45 - 360
Target Start/End: Complemental strand, 106978 - 106673
Alignment:
Q  45 gagaaagagtcgttggaaattttgcaattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttc 144  Q
    ||||||||| || ||| |||||  ||||||| ||| |||||||||||||| |||||| ||||||| ||||||||||| |||||| |||||| |||||||     
T  106978 gagaaagagccgctgggaatttcacaattttttgaaaatcaatcaatttggtccttggcaattttatgaaaatcaatcaatttggtccttgacaatttta 106879  T
Q  145 tgtaaatcaatcaatttggt-catgcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaactta 243  Q
     ||||||||||||||||||| | ||||||| |||||| | ||||||||||||||||||||||| |||  ||||||||         ||||||||||||||    
T  106878 cgtaaatcaatcaatttggtccctgcttgcgtgacatctaacgtggtaagccttgtaagaggtcaacggtacacgtc---------aacagaccaactta 106788  T
Q  244 acggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaaga 343  Q
    ||||||| |||||||||||  ||||||||||||||||   ||||||||||||||||| |||||| | |||| |||| || |||  || | |||||||||     
T  106787 acggagggactgatttgattgacattttgtaaattcggaaactaaatagatatttcgtaaaattcatggacaaatttggctga--ttggtaaattcaagg 106690  T
Q  344 acgaatttgaggtatta 360  Q
    ||||||||||| |||||    
T  106689 acgaatttgagatatta 106673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 107274 - 107234
Alignment:
Q  1 attgaagctctctcacatcatcattgtacatagagcttgaa 41  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  107274 attgaagctctctcacatcatcattgtacattgagtttgaa 107234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1712 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 70 - 363
Target Start/End: Complemental strand, 1276 - 982
Alignment:
Q  70 aattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-tg 168  Q
    |||||||||| |||| ||||||||||||||||  |||||| || ||||| || |||||  ||||| | |||||| |||||||| ||||||||||||  ||    
T  1276 aattttctgaaaatccatcaatttgttccttggaaattttgtgtaaatccatcaatttagtccttcgaaattttgtgtaaatccatcaatttggtccctg 1177  T
Q  169 cttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaacat 268  Q
    ||||| || ||| |||||||||| || |||| ||||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||  ||||    
T  1176 cttgcgtggcatttgacgtggtacgctttgtcagaggttaacgtgacacgtcacctccgttaacagaccaatttaacggagggactaatttgattgacat 1077  T
Q  269 tttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    |||||||||||   |||||  | ||||||||| | |||| | ||||||| |  |  ||||||| |||||||||| || | |||||||||||||||    
T  1076 tttgtaaattcagggactattttgatatttcgaataattcagggacgaaatttgccgatttttcaaaattcaaggactattttgaggtattagtc 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 91; Significance: 1e-43; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 69 - 250
Target Start/End: Original strand, 7031 - 7213
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||| ||||||| |||||| ||||||||||||| |||||||  |    
T  7031 caattttctgaaaatccatcaatttggtccttggaaattttgtgtaaatccatcaatttggtccttggaaattttgtgtaaatcaatcagtttggtccct 7130  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggagg 250  Q
    |||||| || ||| ||||||||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  7131 gcttgcgtggcatctgacgtggtaagctttgtcagaggttaacgttacacgtcacctccgttaacagaccaacttaacggagg 7213  T

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Target: scaffold0058; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 224 - 363
Target Start/End: Original strand, 14293 - 14432
Alignment:
Q  224 tccgttaacagaccaacttaacggaggtactgatttgatgaacattttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggt 323  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||   |||||| | |||||||||||||||| | ||||||| |  |     
T  14293 tccgttaacagaccaacttaacggagggactgatttgattgacattttgtaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgc 14392  T
Q  324 tgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
     ||||||| |||||||||| ||||||||||||||||||||    
T  14393 cgatttttcaaaattcaaggacgaatttgaggtattagtc 14432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 369
Target Start/End: Complemental strand, 3374 - 3288
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaa 369  Q
    |||||| | |||||||||||||||| | |||| || | ||  ||||||| |||||||||| |||||||||||||||||||| |||||    
T  3374 gactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcaattaa 3288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 283 - 369
Target Start/End: Complemental strand, 4546 - 4460
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctattaa 369  Q
    |||||| | |||||||||||||||| | |||| || | ||  ||||||| |||||||||| |||||||||||||||||||| |||||    
T  4546 gactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttgaggtattagtcaattaa 4460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 69 - 363
Target Start/End: Original strand, 54053 - 54347
Alignment:
Q  69 caattttctgataatcaatcaatttgttccttgacaattttctgaaaatcaattaatttgatccttggcaattttctgtaaatcaatcaatttggtca-t 167  Q
    ||||||||||| |||| ||||||||| ||||||  |||||| || ||||| || |||||  |||||   |||||| ||||||||||||| |||||||  |    
T  54053 caattttctgaaaatccatcaatttggtccttgt-aattttgtgtaaatccatcaatttcgtccttcaaaattttgtgtaaatcaatcagtttggtccct 54151  T
Q  168 gcttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaacggaggtactgatttgatgaaca 267  Q
    |||||| || ||| ||||||||||||| |||| | ||||||||   ||||||||||||||||||| |||||| |||||||||| ||| |||||||  |||    
T  54152 gcttgcgtgtcatctgacgtggtaagctttgtcaaaggttaacgtgacacgtcacctccgttaacggaccaaattaacggagggactaatttgattgaca 54251  T
Q  268 ttttgtaaattcgatgactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtc 363  Q
    ||||||||||||   |||||| | ||||||||| |||||| | ||||||| | |   ||||||| |||||||||| || | |||||||||||||||    
T  54252 ttttgtaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggactattttgaggtattagtc 54347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 287 - 366
Target Start/End: Complemental strand, 436341 - 436262
Alignment:
Q  287 aaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattagtctat 366  Q
    ||||||||||||||||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||| ||| |||||    
T  436341 aaatagatatttcgcaaaatttatggatgaatttggctgatttttgaaaattcaagaacgaatttgaggtgttactctat 436262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 245
Target Start/End: Original strand, 63617 - 63692
Alignment:
Q  170 ttgcatgacatatgacgtggtaagccttgtaagaggttaacaatacacgtcacctccgttaacagaccaacttaac 245  Q
    |||| |||||| |||||||||||||||||||||||||||||| | || ||||| || |||||| ||||||||||||    
T  63617 ttgcgtgacatctgacgtggtaagccttgtaagaggttaacactgcatgtcacatcagttaactgaccaacttaac 63692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 361
Target Start/End: Complemental strand, 8342 - 8264
Alignment:
Q  283 gactaaatagatatttcgcaaaatttaaggacgaattcggttgatttttgaaaattcaagaacgaatttgaggtattag 361  Q
    |||||||||||||||| |||||||| ||| ||||||| ||   |||||| |||||||||| ||||||||||||||||||    
T  8342 gactaaatagatattttgcaaaattcaagaacgaatttggccaattttttaaaattcaaggacgaatttgaggtattag 8264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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