View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9061_low_62 (Length: 258)
Name: NF9061_low_62
Description: NF9061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9061_low_62 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 8 - 242
Target Start/End: Original strand, 36986642 - 36986876
Alignment:
| Q |
8 |
caggtagaaaataaaatatgttcttttcatttcctacaaatagcaaattttagaatttctgagccatttttggtcgctcacatttgtcaccctttgtttc |
107 |
Q |
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| T |
36986642 |
caggtagaaaataaaatatgttcttttcatttcctacaaatagcaaactttagaatttctgagccatttttcgtcgctcacatttgtcaccctttgtttc |
36986741 |
T |
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| Q |
108 |
acacattgtttcatgtttccaagctatcaaaagtgaagaattaactaaagaaaactgtagtaaaatatccactattagaaacaaacaattacaatcattg |
207 |
Q |
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||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
36986742 |
acacattgtatcatgtttcctagctatcaaaagtgaagaattaactaaagaaaactgtagtaaaatatccactattaggaacaaacaattacaatcattg |
36986841 |
T |
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| Q |
208 |
tagaattaatgaaaacatagaaaagtacaagaaaa |
242 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
36986842 |
tagaattaatgaaaacatagaaaagtacaagaaaa |
36986876 |
T |
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