View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9061_low_63 (Length: 254)
Name: NF9061_low_63
Description: NF9061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9061_low_63 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 7 - 236
Target Start/End: Original strand, 38265292 - 38265524
Alignment:
| Q |
7 |
tttggtgttgagcaatgctttgaagagaattagagaatgaaagacattgaagaaagaaaagcatctcctccttctcct---cctctgtcgaagtcgaaat |
103 |
Q |
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| T |
38265292 |
tttgttgttgagcaatgctttgaagagaattagagaatgaaagacattgaagaaagaaaagcatctcctccttctccttctcctctgtcgaagtcgaaat |
38265391 |
T |
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| Q |
104 |
atgattattacggaatttgctttatcggaggtatgcttagttccggcgccacccatctcgctataacacctctcgatgtactcaaagtcaacatgcaagt |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38265392 |
atgattattacggaatttgctttatcggaggtatgcttagttccggcgccacccatctcgctataacacctctcgatgtactcaaagtcaacatgcaagt |
38265491 |
T |
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| Q |
204 |
caatccagaaaaatacaagaacaatggaattct |
236 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
38265492 |
caatccagaaaaatacaagaacaatggaattct |
38265524 |
T |
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