View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9061_low_65 (Length: 253)
Name: NF9061_low_65
Description: NF9061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9061_low_65 |
 | |
|
| [»] scaffold0197 (1 HSPs) |
| | |
|
| [»] scaffold0006 (2 HSPs) |
| | |
|
| [»] scaffold0078 (1 HSPs) |
| | |
|
| [»] scaffold0209 (1 HSPs) |
| | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0197 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold0197
Description:
Target: scaffold0197; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 16717 - 16947
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16717 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
16816 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16817 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
16916 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
16917 |
gcaagagatagagaaagaaggaccattacgg |
16947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 223; Significance: 1e-123; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 33789035 - 33788805
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33789035 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
33788936 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33788935 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
33788836 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
33788835 |
gcaagagatagagaaagaaggaccattacgg |
33788805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 28805130 - 28805360
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28805130 |
taagtagggatgttacctttgatgagacccggatgaggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
28805229 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28805230 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
28805329 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
28805330 |
gcaagagatagagaaagaaggaccattacgg |
28805360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 31399400 - 31399630
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31399400 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacttagagactcaagtaccggaaactatggtggagaaaactcagtttga |
31399499 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31399500 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
31399599 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
31399600 |
gcaagagatagagaaagaaggaccattacgg |
31399630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 27447502 - 27447272
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27447502 |
taagtagggatgttacctttgatgagacccgtatgaggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
27447403 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27447402 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatactagtggaactcaaccggtagtggatcctgagtatctattg |
27447303 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|| ||| |||||||||||||||||||||||| |
|
|
| T |
27447302 |
gctagagatagagaaagaaggaccattacgg |
27447272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 43594800 - 43594570
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43594800 |
taagtagggatgttacctttgatgagacccgtatggggatgaagtgcaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
43594701 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43594700 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatactagtggaactcaaccggtagtggatcctgagtatctattg |
43594601 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|| ||| |||||||||||| ||||||||||| |
|
|
| T |
43594600 |
gctagagatagagaaagaatgaccattacgg |
43594570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 43627594 - 43627364
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43627594 |
taagtagggatgttacctttgatgagacccgtatggggatgaagtgcaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
43627495 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43627494 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatactagtggaactcaaccggtagtggatcctgagtatctattg |
43627395 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|| ||| |||||||||||| ||||||||||| |
|
|
| T |
43627394 |
gctagagatagagaaagaatgaccattacgg |
43627364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 37559010 - 37559231
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37559010 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
37559109 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
37559110 |
ggtggagcttccaaatgaagaaga---------agaagatgaagcttcgatatcggatacaagtggaactcaaccggtggtggatcctaagtatctattg |
37559200 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
37559201 |
gcaagagatagagaaagaaggaccattacgg |
37559231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 28835979 - 28835751
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| |||||||||||||| |
|
|
| T |
28835979 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactttagtaccgaaaacaatggtggaggaaactcagtttgagg |
28835880 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
28835879 |
tggagcttccaaatgaagaaaaaaatgatgtagaagatgaagcttcgacatcggatacaagtgaaactcaaccggtagtggatcctgattatcttttggc |
28835780 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||| ||||||||||||| |
|
|
| T |
28835779 |
tagagatagagaaaggaggaccattacgg |
28835751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 24557997 - 24558222
Alignment:
| Q |
6 |
agggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgagatgg |
105 |
Q |
| |
|
||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||| |||||| ||| |
|
|
| T |
24557997 |
agggacgttacctttgatgagactcgtatggggatgaagtgtaaagacctagagactttagtaccggaaacaatggtggaggaaaatcattttgaggtgg |
24558096 |
T |
|
| Q |
106 |
agcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggcaag |
205 |
Q |
| |
|
|||||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| || |
|
|
| T |
24558097 |
agcttccaaatgaagataaagatgatgaagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgattatcttttggatag |
24558196 |
T |
|
| Q |
206 |
atatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
| |||||||||| ||||||||||||| |
|
|
| T |
24558197 |
agatagagaaaggaggaccattacgg |
24558222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 231
Target Start/End: Original strand, 24599029 - 24599254
Alignment:
| Q |
6 |
agggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgagatgg |
105 |
Q |
| |
|
||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| ||| |||||| ||| |
|
|
| T |
24599029 |
agggacgttacctttgatgagactcgtatggggatgaagtgtaaagacctagagactttagtaccggaaacaatggtggaggaaaatcattttgaggtgg |
24599128 |
T |
|
| Q |
106 |
agcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggcaag |
205 |
Q |
| |
|
|||||||||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| || |
|
|
| T |
24599129 |
agcttccaaatgaagataaagatgatgaagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgattatcttttggatag |
24599228 |
T |
|
| Q |
206 |
atatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
| |||||||||| ||||||||||||| |
|
|
| T |
24599229 |
agatagagaaaggaggaccattacgg |
24599254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25447937 - 25447991
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
25447937 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
25447991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 19346957 - 19346727
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19346957 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
19346858 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19346857 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
19346758 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
19346757 |
gcaagagatagagaaagaaggaccattacgg |
19346727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 3 - 230
Target Start/End: Complemental strand, 31058635 - 31058408
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| || | | ||||| ||||||||| ||||||| |||||| |
|
|
| T |
31058635 |
agtaggtatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactttagcatcagaaacaatggtggaggaaactcaatttgagg |
31058536 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
31058535 |
tggagcttccaaatgaagaaaaagatgatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgattatcttttggc |
31058436 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacg |
230 |
Q |
| |
|
||| |||||||||| |||||||||||| |
|
|
| T |
31058435 |
tagagatagagaaaggaggaccattacg |
31058408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 22 - 231
Target Start/End: Original strand, 39485640 - 39485849
Alignment:
| Q |
22 |
atgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgagatggagcttccaaatgaaga |
121 |
Q |
| |
|
|||||| ||| ||| |||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
39485640 |
atgagaaccgtatgaggatgaagtgcaaagacctagagactttagtaccggaaacaatggtggaggaaactcagtttgagatggagcttcgaaatgaaga |
39485739 |
T |
|
| Q |
122 |
agaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggcaagatatagagaaagaagg |
221 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| |||||||||| ||| |
|
|
| T |
39485740 |
agaagatgatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgattatctcttggctagagatagagaaaggagg |
39485839 |
T |
|
| Q |
222 |
accattacgg |
231 |
Q |
| |
|
|||||||||| |
|
|
| T |
39485840 |
accattacgg |
39485849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 39485414 - 39485198
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
39485414 |
agtagagatgttacctttgatgagacatgtatgggaatgaagtgtaaagacctagagactttagtaccggaaacaatggtggagaaaactcaatttgagg |
39485315 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| |
|
|
| T |
39485314 |
tggagcttccaaatgaagaag------------aagatgaagcttcgacatcggatacaagtggaactcaactggtagtggatcctgattatctcttggc |
39485227 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||| ||||||||||||| |
|
|
| T |
39485226 |
tagagatagagaaaggaggaccattacgg |
39485198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 25393563 - 25393504
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagact |
62 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
25393563 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagact |
25393504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2738654 - 2738708
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
2738654 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
2738708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17934533 - 17934587
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
17934533 |
taagcagggatgttacttttgatgagacccgtatggggatgaagtgcaaagacct |
17934587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20052493 - 20052439
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
20052493 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
20052439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22714966 - 22714912
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
22714966 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
22714912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39684696 - 39684750
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
39684696 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
39684750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 10686672 - 10686902
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10686672 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
10686771 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10686772 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
10686871 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
10686872 |
gcaagagatagagaaagaaggaccattacgg |
10686902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 35743068 - 35742838
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35743068 |
taagtagggatgttacctttgatgagacccgaatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
35742969 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35742968 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
35742869 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
35742868 |
gcaagagatagagaaagaaggaccattacgg |
35742838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 230
Target Start/End: Original strand, 18868080 - 18868307
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18868080 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactttagtaccggaaactatggtggagaaaactcagtttgagg |
18868179 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
18868180 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcagatacaagtggaactcaaccagtagtggatccggagtatctcttggc |
18868279 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacg |
230 |
Q |
| |
|
||| ||||||| ||||||||||||||| |
|
|
| T |
18868280 |
tagagatagagagagaaggaccattacg |
18868307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 26299050 - 26298831
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
26299050 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactttagtaccggaaacaatggtggataaaactcagtttgagg |
26298951 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||| || ||||| ||||| |
|
|
| T |
26298950 |
tggagcttccaaatgaagaagaagaa---------gatgaagcttcaacatcgaatacaagtggaacacaaccggtagtggatccggattatctcttggc |
26298860 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||| ||||||||||||| |
|
|
| T |
26298859 |
tagagatagagaaaggaggaccattacgg |
26298831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 26400887 - 26400989
Alignment:
| Q |
130 |
atgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggcaagatatagagaaagaaggaccattac |
229 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||| |
|
|
| T |
26400887 |
atgtagaagatgaagcttcgacatcgaatacaagtggaactcaaccagtagtggatcctgattatcttttggctagagatagagaaaggaggaccattac |
26400986 |
T |
|
| Q |
230 |
ggt |
232 |
Q |
| |
|
||| |
|
|
| T |
26400987 |
ggt |
26400989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4814958 - 4814904
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
4814958 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
4814904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16754992 - 16754938
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
16754992 |
taagcagggatgttacttttgatgagacccgaatggggatgaagtgcaaagacct |
16754938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28893213 - 28893267
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
28893213 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
28893267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28330344 - 28330398
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| ||| |||||||||| |||||||||||||| |||||||| |
|
|
| T |
28330344 |
taagcagggatgttacttttaatgagacccgcatggggatgaagtgcaaagacct |
28330398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25682761 - 25682805
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagt |
45 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
25682761 |
taagcagggatgttacttttgatgagacccgcatggggatgaagt |
25682805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 24263731 - 24263961
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24263731 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
24263830 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24263831 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
24263930 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
24263931 |
gcaagagatagagaaagaaggaccattacgg |
24263961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 21986599 - 21986369
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21986599 |
taagtagggatgttacctttgatgagactcggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
21986500 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
21986499 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccgatagtggatcctgagtatgtattg |
21986400 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|| ||| |||||||||||||||||||||||| |
|
|
| T |
21986399 |
gctagagatagagaaagaaggaccattacgg |
21986369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 16882606 - 16882376
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16882606 |
taagtagggatgttaccttcgatgagacccagatggggatgaagtgtaaagacttagagactcaagtaccggaaactatggtggagagaactcagtttga |
16882507 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16882506 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
16882407 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
16882406 |
gcaagagatagagaaagaaggaccattacgg |
16882376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 18411334 - 18411106
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
18411334 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactttagtaccggaaacaatggtggagaaaactcaatttgagg |
18411235 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||| ||||| |
|
|
| T |
18411234 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacattggatacaagtggaactcaacccgtagtggatccggattatctcttggc |
18411135 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
18411134 |
tagagatagagaaagaaggaccattacgg |
18411106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 24272310 - 24272538
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
24272310 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctaaagacttaagtaccggaaacaatggtggagaaaactcagtttgagg |
24272409 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||| |
|
|
| T |
24272410 |
tggagcttccaaatgaagaagaagatgatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcttgattatctcttggc |
24272509 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
| | |||||||||| ||||||||||||| |
|
|
| T |
24272510 |
taaagatagagaaaggaggaccattacgg |
24272538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 9187555 - 9187783
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
9187555 |
agtatggatgttacctttgatgagacccgtatggggatgaagagtaaagacctagagactttagtaccggaaacaatggtggagaaaactcagtttgagg |
9187654 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||| | |
|
|
| T |
9187655 |
tagagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacgtcggatacaagtggaactcaaccggtagtggatccggattatctcttgac |
9187754 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
9187755 |
tagagatagagaaagaaggaccattacgg |
9187783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 21642364 - 21642139
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21642364 |
agtagggatgttaccttcgatgagacccgtatggggatgatgtgtaaagacctagagactttagtaccggaaa--atggtggagaaaactcagtttgagg |
21642267 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||| |||| || ||||| ||||| |
|
|
| T |
21642266 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatc-gatacaaatgaaactcaaccggtagtgaatccggattatctcttggc |
21642168 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
21642167 |
tagagatagagaaagaaggaccattacgg |
21642139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3322520 - 3322466
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
3322520 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
3322466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44012263 - 44012209
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
44012263 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
44012209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25407863 - 25407917
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| ||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
25407863 |
taagcagggatgttacttttgatgagacccacatggggatgaagtgcaaagacct |
25407917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7072500 - 7072552
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagac |
53 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||| ||||||||| |||||| |
|
|
| T |
7072500 |
taagcagggatgttacttttgatgagacccgcatggagatgaagtgcaaagac |
7072552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 18858255 - 18858025
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18858255 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
18858156 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18858155 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
18858056 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
18858055 |
gcaagagatagagaaagaaggaccattacgg |
18858025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 9226809 - 9227039
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
9226809 |
taagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagacccaagtaccggaaactatggtggagaaaactcaatttga |
9226908 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9226909 |
ggtggagcttccaaatgaagaagaaaaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
9227008 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|| ||| |||||||||||||||||||||||| |
|
|
| T |
9227009 |
gctagagatagagaaagaaggaccattacgg |
9227039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 16626403 - 16626630
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| | |||| ||||||||| |||||||||||||| |
|
|
| T |
16626403 |
agtagggatgttacctttgatgagacccgtatggggatgaagtg-aaagacctagagactctagtactgtaaacaatggtggaggaaactcagtttgagg |
16626501 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
16626502 |
tggagcttccaaatgaagaagaagatgatgtagaagatgaagcttcaacatcggatactagtggaactcaaccggtagtggatcctgattatctcttggc |
16626601 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||| ||||||||||||| |
|
|
| T |
16626602 |
tagagatagagaaaggaggaccattacgg |
16626630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 5145585 - 5145357
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
5145585 |
agtagggatattacctttgatgagacccgtatagggatgaagtgtaaagacctagagactttggtaccggaaacaatggtggaggaaactcagtttgagg |
5145486 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||| ||||| |
|
|
| T |
5145485 |
tggagcttccaagtgaagaagaagatgatgtagaagatgaagcttcgacatcagatacaagtggaactcaaccggtagtggatcctgattctctcttggc |
5145386 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||| ||||||||||||| |
|
|
| T |
5145385 |
tagagatagagaaaggaggaccattacgg |
5145357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4567788 - 4567841
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacc |
54 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
4567788 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacc |
4567841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15314766 - 15314823
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctaga |
58 |
Q |
| |
|
|||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
15314766 |
taagcagggatgttatttttgatgagacccacatggggatgaagtgcaaagacctaga |
15314823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36770039 - 36770084
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtg |
46 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
36770039 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtg |
36770084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 16634929 - 16634976
Alignment:
| Q |
8 |
ggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
||||||||| ||||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
16634929 |
ggatgttacttttgatgaggcccgtatggggatgaagtgcaaagacct |
16634976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47565162 - 47565216
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
||||||| |||||||| |||||||||||||| ||| | |||||||| |||||||| |
|
|
| T |
47565162 |
taagtagagatgttacttttgatgagacccgcatgtgaatgaagtgcaaagacct |
47565216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 33333484 - 33333714
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
33333484 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagagaactcagtttga |
33333583 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33333584 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
33333683 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
33333684 |
gcaagagatagagaaagaaggaccattacgg |
33333714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 14739982 - 14740210
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14739982 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctaaagactcaagtaccggaaactatggtggagaaaactcagtttgagg |
14740081 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
14740082 |
tggagcttccaaatgaagaagaagaagatgtagaagatgacgcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtacctattggc |
14740181 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||||||||||||||||| |
|
|
| T |
14740182 |
tagagatagagaaagaaggaccattacgg |
14740210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 24433730 - 24433958
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||| ||||||| ||||||| |||||| |
|
|
| T |
24433730 |
agtagggatgttacctttgatgagacccgtatggggatgaagtctaaagacctagagactttagtaccggaaacatgggtggaggaaactcaatttgagg |
24433829 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
||||||||||| ||||||| || | || | |||||||||||||| |||||| |||||||||||||||||| ||||||||||||||| ||||| | | |
|
|
| T |
24433830 |
tggagcttccacatgaagagaaaaatgacgaggaagatgaagcttcaacatcgaatacaagtggaactcaactggtagtggatcctgattatcttcttgg |
24433929 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||| |||||||||| ||||||||||||| |
|
|
| T |
24433930 |
aagagatagagaaaggaggaccattacgg |
24433958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 17692578 - 17692527
Alignment:
| Q |
7 |
gggatgttacctttgatgagacccggatggggatgaagtgtaaagacctaga |
58 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
17692578 |
gggatgttacttttgatgagacccgcatggggatgaagtgcaaagacctaga |
17692527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13881188 - 13881242
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
13881188 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
13881242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22348707 - 22348653
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
22348707 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
22348653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25944118 - 25944172
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
25944118 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
25944172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35203795 - 35203741
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
35203795 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
35203741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 16)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 2674628 - 2674858
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2674628 |
taagtagggatgttaccttcgatgagacccgaatggggatgaagtgtaaagacttagagactcaagtaccggaaactatggtggagaaaactcagtttga |
2674727 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2674728 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
2674827 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
2674828 |
gcaagagatagagaaagaaggaccattacgg |
2674858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 22170716 - 22170946
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22170716 |
taagtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
22170815 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22170816 |
ggtggagcttccaaattaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
22170915 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||| | |||||||||||||||||||||||| |
|
|
| T |
22170916 |
gcaaaagatagagaaagaaggaccattacgg |
22170946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 8514773 - 8514543
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8514773 |
taagtagggatgttaccttcgatgagacccggatggggatgaagtgtaaagacttagagactcaagtaccggaaactatggtggagagaactcagtttga |
8514674 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8514673 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
8514574 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
8514573 |
gcaagagatagagaaagaaggaccattacgg |
8514543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 32478019 - 32477789
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
32478019 |
taagtagggatgttaccttcgatgagacccggatggggatgaagtgtaaagacttagagactcaagtaccggaaactatggtggagagaactcagtttga |
32477920 |
T |
|
| Q |
101 |
gatggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32477919 |
ggtggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattg |
32477820 |
T |
|
| Q |
201 |
gcaagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
32477819 |
gcaagagatagagaaagaaggaccattacgg |
32477789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 1308548 - 1308320
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1308548 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactttagtaccggaaacaatggtggagaaaactcagtttgagg |
1308449 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
1308448 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcaacatcggatacaagtggaactcaaccggtagtggatccggattatctcttggc |
1308349 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||| ||||||||||||| |
|
|
| T |
1308348 |
tagagatagagaaaggaggaccattacgg |
1308320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 3325948 - 3326164
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
3325948 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactttagtaccggaaacaatggtggagaaaactcaatttgagg |
3326047 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||| || || |
|
|
| T |
3326048 |
tggagcttccaaatgaag-aga-----------aagatgaagcttcaacatcagatacaagtggaactcaaccggtagtggatcctgactatcttttagc |
3326135 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| ||| |||||| ||||||||||||| |
|
|
| T |
3326136 |
tagagataaagaaaggaggaccattacgg |
3326164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6305760 - 6305814
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
6305760 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
6305814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10096538 - 10096484
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10096538 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
10096484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10610505 - 10610451
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10610505 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
10610451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10899458 - 10899512
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10899458 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
10899512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16459913 - 16459967
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
16459913 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
16459967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29911685 - 29911631
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
29911685 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
29911631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 54190957 - 54191011
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
54190957 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
54191011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 10203419 - 10203370
Alignment:
| Q |
6 |
agggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10203419 |
agggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
10203370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22623711 - 22623659
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagac |
53 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||| |
|
|
| T |
22623711 |
taagcagggatgttacttttgatgagacccgaatggggatgaagtgcaaagac |
22623659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18144975 - 18144876
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttga |
100 |
Q |
| |
|
|||||||||| |||||||||||||| || || ||| | |||||||||||||| ||||||||| || |||| |||| | || |||| ||||| ||||||| |
|
|
| T |
18144975 |
taagtagggacgttacctttgatgatacacgtatgagaatgaagtgtaaagatctagagactttagcaccgaaaacaagggaggaggaaacttagtttga |
18144876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 205; Significance: 1e-112; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 41395928 - 41395700
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
41395928 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccagaaactatggtggagaaaactcagtttgagg |
41395829 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41395828 |
tggagcttccaaatgaagaagaagaagatgtggaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
41395729 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||||||||| ||||||| |
|
|
| T |
41395728 |
tagagatagagaaagaaggacaattacgg |
41395700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 19369095 - 19369323
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19369095 |
agtagggatgttacctttgatgagacccgtatggggattaagtgtaaagacctagagactttagtaccggaaacaatggtggagaaaactcagtttgagg |
19369194 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||| |
|
|
| T |
19369195 |
tggagcttccaaatgaagaagatgaagatgtagaagatgaagcttcgacatcggatacaagtgaaactcaaccggtagtggatccggattatctcttggc |
19369294 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||| ||||||||||||| |
|
|
| T |
19369295 |
tagagatagagaaaggaggaccattacgg |
19369323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2396987 - 2396933
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
2396987 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
2396933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9524177 - 9524231
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
9524177 |
taagcagggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
9524231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 145; Significance: 2e-76; HSPs: 2)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 231
Target Start/End: Complemental strand, 8341 - 8113
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||| ||| ||||||||| |||||||||||||| |
|
|
| T |
8341 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagaaactttaataccaaaaaaaatggtggaggaaactcagtttgagg |
8242 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggc |
202 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
8241 |
tggagcttccaaatgaagaagaagatgatgtagaagatgaagcttcaacattggatacaattggaactcaaccggtagtggatcctgatcatctcttggc |
8142 |
T |
|
| Q |
203 |
aagatatagagaaagaaggaccattacgg |
231 |
Q |
| |
|
||| |||||||||| ||||||||||||| |
|
|
| T |
8141 |
tagagatagagaaaggaggaccattacgg |
8113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 3 - 187
Target Start/End: Complemental strand, 185 - 1
Alignment:
| Q |
3 |
agtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgaga |
102 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||| |
|
|
| T |
185 |
agtagggatgttacctttgatgagacccgtatggggatgaagtgtaaagacctagagactttagtaccagaaacaatggtggaggaaactcagtttgagg |
86 |
T |
|
| Q |
103 |
tggagcttccaaatgaagaagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcc |
187 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
85 |
tggagcttccaaatgaagaagaagatgatgtagaagatgaagcttcaacattggatacaattggaactcaaccggtagtggatcc |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0078 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0078
Description:
Target: scaffold0078; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 230
Target Start/End: Complemental strand, 34697 - 34489
Alignment:
| Q |
24 |
gagacccggatggggatgaagtgtaaagacctagagactcaagtaccggaaactatggtggagaaaactcagtttgagatggagcttccaa---atgaag |
120 |
Q |
| |
|
||||| || |||||||| ||||||| ||||||| ||||| || ||||||||| | ||||||| ||||| ||| |||| |||||||||||| |||| | |
|
|
| T |
34697 |
gagacacgtatggggataaagtgtacagacctatagactttagcaccggaaacaagggtggagtaaactaagtgtgaggtggagcttccaattgatgatg |
34598 |
T |
|
| Q |
121 |
aagaagaagatgtagaagatgaagcttcgacatcggatacaagtggaactcaaccggtagtggatcctgagtatctattggcaagatatagagaaagaag |
220 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||||||||| || |
|
|
| T |
34597 |
aagaagaagatgtggaggatgaagcttcgacatcggatacaagtggaactcaaccaatagtggatcctgactatcttttggctagatatagagaaaggag |
34498 |
T |
|
| Q |
221 |
gaccattacg |
230 |
Q |
| |
|
| |||||||| |
|
|
| T |
34497 |
g-ccattacg |
34489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0209 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0209
Description:
Target: scaffold0209; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 869 - 822
Alignment:
| Q |
8 |
ggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
869 |
ggatgttacttttgatgagacccgcatggggatgaagtgcaaagacct |
822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18775 - 18829
Alignment:
| Q |
1 |
taagtagggatgttacctttgatgagacccggatggggatgaagtgtaaagacct |
55 |
Q |
| |
|
|||| |||||||| || |||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
18775 |
taagcagggatgtcacttttgatgagacccgtatggggatgaagtgcaaagacct |
18829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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