View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9063_low_23 (Length: 264)

Name: NF9063_low_23
Description: NF9063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9063_low_23
NF9063_low_23
[»] chr2 (26 HSPs)
chr2 (16-141)||(38527800-38527925)
chr2 (149-218)||(9706957-9707026)
chr2 (149-217)||(13215564-13215632)
chr2 (149-225)||(13754119-13754194)
chr2 (149-220)||(35158355-35158426)
chr2 (149-214)||(14541505-14541570)
chr2 (149-221)||(13000915-13000987)
chr2 (149-219)||(44360602-44360672)
chr2 (149-221)||(31011722-31011794)
chr2 (149-217)||(37116607-37116675)
chr2 (149-220)||(34262826-34262897)
chr2 (154-217)||(34884547-34884610)
chr2 (155-217)||(25186840-25186902)
chr2 (149-223)||(36173224-36173298)
chr2 (149-217)||(9370145-9370213)
chr2 (149-217)||(43077463-43077531)
chr2 (149-219)||(3363753-3363823)
chr2 (149-195)||(8443871-8443917)
chr2 (149-195)||(13965800-13965846)
chr2 (149-219)||(14295761-14295831)
chr2 (149-219)||(14308562-14308632)
chr2 (149-219)||(26342749-26342819)
chr2 (158-223)||(1395729-1395794)
chr2 (149-214)||(4952700-4952765)
chr2 (147-219)||(25558188-25558260)
chr2 (149-221)||(32543791-32543863)
[»] chr1 (37 HSPs)
chr1 (149-224)||(36318516-36318591)
chr1 (149-220)||(9127837-9127908)
chr1 (149-223)||(30702288-30702362)
chr1 (149-220)||(51974169-51974240)
chr1 (149-218)||(32348148-32348216)
chr1 (149-217)||(42800277-42800345)
chr1 (149-219)||(40926751-40926821)
chr1 (149-222)||(31487777-31487850)
chr1 (149-213)||(31570635-31570699)
chr1 (149-217)||(32168310-32168378)
chr1 (170-213)||(17013601-17013644)
chr1 (170-213)||(37296747-37296790)
chr1 (149-220)||(52649727-52649798)
chr1 (149-223)||(36850802-36850876)
chr1 (149-221)||(35700373-35700445)
chr1 (149-217)||(51613582-51613650)
chr1 (164-223)||(19455413-19455471)
chr1 (147-218)||(46096716-46096787)
chr1 (149-219)||(19349377-19349447)
chr1 (149-218)||(35605768-35605837)
chr1 (149-222)||(48508299-48508372)
chr1 (149-221)||(10506978-10507050)
chr1 (149-217)||(12721611-12721679)
chr1 (149-219)||(2059810-2059880)
chr1 (149-219)||(13566848-13566918)
chr1 (149-223)||(18344491-18344565)
chr1 (149-219)||(19929464-19929534)
chr1 (149-219)||(29830922-29830992)
chr1 (149-219)||(32994467-32994537)
chr1 (149-219)||(35255655-35255725)
chr1 (149-219)||(35531293-35531363)
chr1 (149-223)||(38597756-38597830)
chr1 (149-219)||(39412509-39412579)
chr1 (149-219)||(43500675-43500745)
chr1 (149-217)||(4100907-4100975)
chr1 (149-217)||(5598216-5598284)
chr1 (149-217)||(37735137-37735205)
[»] chr5 (40 HSPs)
chr5 (149-224)||(9958881-9958956)
chr5 (149-223)||(26906637-26906711)
chr5 (149-217)||(12784441-12784509)
chr5 (149-221)||(25027573-25027645)
chr5 (149-216)||(24229102-24229169)
chr5 (149-223)||(13461157-13461231)
chr5 (149-223)||(18437321-18437395)
chr5 (149-222)||(31803472-31803545)
chr5 (149-217)||(5842991-5843059)
chr5 (149-217)||(12722957-12723025)
chr5 (149-217)||(37306697-37306765)
chr5 (149-217)||(37633829-37633897)
chr5 (149-223)||(6008031-6008106)
chr5 (149-219)||(24074836-24074906)
chr5 (149-219)||(28446983-28447053)
chr5 (149-222)||(32389134-32389207)
chr5 (149-217)||(37809912-37809980)
chr5 (149-217)||(39893807-39893875)
chr5 (152-219)||(31546000-31546067)
chr5 (149-223)||(7408478-7408552)
chr5 (155-221)||(38308130-38308196)
chr5 (149-219)||(42911701-42911771)
chr5 (170-223)||(19831561-19831614)
chr5 (162-223)||(23418693-23418754)
chr5 (150-223)||(31985049-31985122)
chr5 (149-230)||(38297523-38297604)
chr5 (149-217)||(12637945-12638013)
chr5 (149-217)||(13703250-13703318)
chr5 (149-219)||(4098482-4098552)
chr5 (149-219)||(4985173-4985243)
chr5 (149-219)||(10359233-10359303)
chr5 (149-219)||(14793788-14793858)
chr5 (149-219)||(16124258-16124328)
chr5 (149-219)||(26854093-26854163)
chr5 (149-222)||(3243944-3244017)
chr5 (177-222)||(3686838-3686883)
chr5 (149-222)||(30368133-30368206)
chr5 (156-221)||(32439917-32439982)
chr5 (170-219)||(36481226-36481275)
chr5 (155-223)||(38297620-38297688)
[»] chr7 (17 HSPs)
chr7 (149-220)||(47408281-47408352)
chr7 (149-218)||(35112599-35112668)
chr7 (149-217)||(42841870-42841938)
chr7 (149-218)||(33258051-33258120)
chr7 (149-226)||(43874087-43874164)
chr7 (149-222)||(19327795-19327868)
chr7 (149-219)||(9601897-9601967)
chr7 (149-219)||(9829468-9829538)
chr7 (149-219)||(36298178-36298248)
chr7 (149-222)||(28608760-28608833)
chr7 (149-217)||(18194218-18194286)
chr7 (149-223)||(30866740-30866814)
chr7 (149-219)||(33173976-33174046)
chr7 (149-199)||(41888998-41889048)
chr7 (149-222)||(35746649-35746722)
chr7 (149-213)||(1553688-1553752)
chr7 (218-246)||(25098240-25098268)
[»] chr6 (24 HSPs)
chr6 (149-220)||(23777464-23777535)
chr6 (149-220)||(26485687-26485758)
chr6 (149-213)||(22400566-22400630)
chr6 (149-221)||(9838124-9838196)
chr6 (149-217)||(11129002-11129070)
chr6 (149-220)||(22784670-22784741)
chr6 (149-223)||(17601135-17601209)
chr6 (149-219)||(22050217-22050287)
chr6 (149-219)||(26470725-26470795)
chr6 (149-222)||(24949273-24949346)
chr6 (149-217)||(11676617-11676685)
chr6 (149-213)||(19645724-19645788)
chr6 (149-216)||(34607270-34607337)
chr6 (149-217)||(17251257-17251326)
chr6 (149-214)||(24356056-24356121)
chr6 (149-221)||(1249706-1249778)
chr6 (164-219)||(30416092-30416147)
chr6 (149-219)||(1135183-1135253)
chr6 (149-219)||(3621759-3621829)
chr6 (149-219)||(8176602-8176672)
chr6 (149-219)||(17123987-17124057)
chr6 (170-216)||(34730732-34730778)
chr6 (149-217)||(31244751-31244819)
chr6 (149-221)||(34379026-34379098)
[»] scaffold0001 (1 HSPs)
scaffold0001 (149-221)||(419494-419566)
[»] chr4 (37 HSPs)
chr4 (152-223)||(37502190-37502261)
chr4 (149-219)||(47596615-47596685)
chr4 (155-221)||(26933780-26933846)
chr4 (149-219)||(31984154-31984224)
chr4 (149-219)||(45725708-45725778)
chr4 (149-213)||(31369979-31370043)
chr4 (149-220)||(44176591-44176662)
chr4 (149-223)||(42629485-42629559)
chr4 (149-226)||(30151837-30151914)
chr4 (149-217)||(33809261-33809329)
chr4 (149-221)||(47751700-47751772)
chr4 (149-220)||(23719786-23719857)
chr4 (164-218)||(52057468-52057522)
chr4 (149-219)||(54231711-54231781)
chr4 (149-217)||(9220043-9220111)
chr4 (149-217)||(42133211-42133279)
chr4 (149-216)||(29511218-29511285)
chr4 (149-236)||(29832362-29832449)
chr4 (170-217)||(34361229-34361276)
chr4 (149-219)||(6195196-6195266)
chr4 (149-219)||(14949086-14949156)
chr4 (149-222)||(18135052-18135126)
chr4 (149-219)||(19093155-19093225)
chr4 (149-219)||(22828403-22828473)
chr4 (149-219)||(38009768-38009838)
chr4 (149-219)||(38542278-38542348)
chr4 (149-219)||(42099880-42099950)
chr4 (149-219)||(44069203-44069273)
chr4 (149-219)||(44217878-44217948)
chr4 (149-222)||(49122262-49122336)
chr4 (149-219)||(50623585-50623655)
chr4 (171-217)||(53691678-53691724)
chr4 (158-215)||(36292792-36292849)
chr4 (159-223)||(19399701-19399765)
chr4 (149-217)||(43888156-43888223)
chr4 (151-219)||(46872093-46872161)
chr4 (149-217)||(49089080-49089148)
[»] chr8 (36 HSPs)
chr8 (149-223)||(14061150-14061224)
chr8 (149-217)||(26740138-26740206)
chr8 (149-221)||(31964736-31964808)
chr8 (149-221)||(43553206-43553278)
chr8 (149-222)||(2888469-2888542)
chr8 (149-222)||(18842695-18842768)
chr8 (151-222)||(8554019-8554090)
chr8 (149-220)||(12248771-12248842)
chr8 (149-219)||(41643491-41643561)
chr8 (149-219)||(43641990-43642060)
chr8 (149-218)||(23855727-23855796)
chr8 (149-217)||(14511431-14511499)
chr8 (149-219)||(1245481-1245551)
chr8 (149-219)||(6661122-6661192)
chr8 (149-219)||(6741524-6741594)
chr8 (149-211)||(29091086-29091148)
chr8 (149-223)||(32010085-32010159)
chr8 (149-219)||(33935061-33935131)
chr8 (149-222)||(17074583-17074656)
chr8 (149-222)||(17573614-17573687)
chr8 (164-217)||(27911688-27911741)
chr8 (164-217)||(27958107-27958160)
chr8 (149-221)||(13174096-13174168)
chr8 (149-205)||(35052305-35052361)
chr8 (155-199)||(38222001-38222045)
chr8 (160-223)||(35498082-35498145)
chr8 (149-218)||(167478-167548)
chr8 (149-219)||(8453237-8453307)
chr8 (149-219)||(23848557-23848627)
chr8 (149-223)||(30205621-30205695)
chr8 (149-219)||(45317821-45317891)
chr8 (149-218)||(35029716-35029785)
chr8 (149-217)||(3720851-3720919)
chr8 (149-217)||(8672665-8672733)
chr8 (155-199)||(19972468-19972512)
chr8 (155-199)||(21020321-21020365)
[»] chr3 (25 HSPs)
chr3 (149-218)||(48214225-48214294)
chr3 (149-217)||(33874553-33874621)
chr3 (149-222)||(3643203-3643276)
chr3 (149-222)||(29458210-29458283)
chr3 (149-222)||(41425795-41425868)
chr3 (149-217)||(32853367-32853435)
chr3 (149-217)||(51065054-51065122)
chr3 (149-220)||(24071-24142)
chr3 (149-220)||(41351201-41351272)
chr3 (153-222)||(33074289-33074358)
chr3 (149-222)||(40318935-40319008)
chr3 (149-217)||(20848731-20848799)
chr3 (149-223)||(11473567-11473641)
chr3 (155-221)||(27039619-27039685)
chr3 (149-219)||(32980809-32980879)
chr3 (149-219)||(39866856-39866926)
chr3 (149-222)||(2858584-2858657)
chr3 (175-222)||(36370861-36370908)
chr3 (149-219)||(27992409-27992479)
chr3 (149-219)||(35315301-35315371)
chr3 (149-219)||(47069864-47069934)
chr3 (149-222)||(3114397-3114469)
chr3 (170-219)||(40139862-40139911)
chr3 (149-218)||(48152155-48152224)
chr3 (149-213)||(47104162-47104226)
[»] scaffold0009 (1 HSPs)
scaffold0009 (149-217)||(147129-147197)
[»] scaffold0343 (1 HSPs)
scaffold0343 (149-217)||(7595-7663)
[»] scaffold2146 (1 HSPs)
scaffold2146 (149-223)||(717-791)
[»] scaffold0135 (1 HSPs)
scaffold0135 (149-217)||(30694-30762)
[»] scaffold0280 (1 HSPs)
scaffold0280 (149-219)||(8323-8393)
[»] scaffold0274 (1 HSPs)
scaffold0274 (170-216)||(262-308)
[»] scaffold0192 (1 HSPs)
scaffold0192 (189-221)||(14763-14795)


Alignment Details
Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 38527800 - 38527925
Alignment:
Q  16 caaaatcatgatgattatccatagtatatatcttaggatgatgatttaattaatttggactgaatttgtggctgtaaacgaatgggaattaccacttttt 115  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38527800 caaaatcatgatgattatccatactatatatcttaggatgatgatttaattaatttggactgaatttgtggctgtaaacgaatgggaattaccacttttt 38527899  T
Q  116 gtatgataaacgcatcatatcttata 141  Q
    ||||||||||||||||||||||||||    
T  38527900 gtatgataaacgcatcatatcttata 38527925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 9707026 - 9706957
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  9707026 ttaattgtcactttttgacattttacacaaaccaatacaatcaataaatattactacttttgatacaata 9706957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 13215632 - 13215564
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||| ||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  13215632 ttaattgttactttttgacattttacacaaaccaatacactcaataaatgttactacttttgatacaat 13215564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 13754194 - 13754119
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttact 225  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||| ||||||| |||||||||||||||||||||||||    
T  13754194 ttaattgtcacttt-tgacattttacacaaaccaagacaatcattaaatgttactacttttgatacaataatttact 13754119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 35158355 - 35158426
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| ||||| ||||||  |||||| ||||||||||||| | ||||||||||||||||||||    
T  35158355 ttaattgtcactttttgacattttacatgaaccaagacattcaataaatattactacttttgatacaataat 35158426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 14541570 - 14541505
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatac 214  Q
    |||||||||||||| ||||| |||| ||||||||||||| ||||||||| | ||||||||||||||    
T  14541570 ttaattgtcactttttgacattttatacaaaccaatacaatcaataaatattactacttttgatac 14541505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 13000915 - 13000987
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||| ||||| ||||| ||||||||||  || ||| ||||||||||| |||||||||||||||||||||    
T  13000915 ttaattgttactttgtgacattttacacaaattaagacaatcaataaatgttactacttttgatacaataatt 13000987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 44360672 - 44360602
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  44360672 ttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataa 44360602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 31011722 - 31011794
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||| || || ||||| |||| ||||||||| ||| |||||||||||  ||||||||||||||||||||    
T  31011722 ttaattgttacattttgacattttatacaaaccaagacaatcaataaatgttgctacttttgatacaataatt 31011794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 37116607 - 37116675
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||| | ||||||| |||||||||||||| |||  |||||||||| |||| ||||||||||||    
T  37116607 ttaattgtcattctctgacattttacacaaaccaagacaaccaataaatgttactatttttgatacaat 37116675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 34262826 - 34262897
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||| ||| | | | |||||||||||||| ||||||||||| ||| ||||||||||||| ||||||    
T  34262826 ttaattgtcaattttttatattttacacaaaccaagacattcaataattgttactacttttgatataataat 34262897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 34884547 - 34884610
Alignment:
Q  154 tgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    ||||||||| ||||| |||||||||||||| | | ||||||||| | |||||||||||||||||    
T  34884547 tgtcactttttgacattttacacaaaccaagataatcaataaatattactacttttgatacaat 34884610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 25186840 - 25186902
Alignment:
Q  155 gtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||| ||||| |||||||||||||| | | |||||| |||| |||||||||||||||||    
T  25186840 gtcactttttgacattttacacaaaccaagataatcaatatatgttactacttttgatacaat 25186902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 36173298 - 36173224
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||||||||| || ||||  |||||||||||||| ||| | |||  || |||||||||||||||||||||||||    
T  36173298 ttaattgtcacattttgactttttacacaaaccaaaacactaaatgtatttcactacttttgatacaataattta 36173224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 9370213 - 9370145
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||||| |||||| ||||||| ||  | ||||| ||| |||||||||||||||||    
T  9370213 ttaattgtcactttttgacattttacataaaccaagaccattaataagtgttactacttttgatacaat 9370145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 43077531 - 43077463
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||| ||| | ||| |||||||||||||| ||| ||||||| ||| | |||||||||||||||    
T  43077531 ttaattgtcattttttaacattttacacaaaccaagacaatcaataagtgttattacttttgatacaat 43077463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 3363823 - 3363753
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||| | || ||||| |||||||||||||| ||| ||||||| ||  |||||||||||| ||||||    
T  3363823 ttaattgtcgcattttgacattttacacaaaccaagacaatcaataattgatactacttttgatgcaataa 3363753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 8443917 - 8443871
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataa 195  Q
    |||||||||||||| ||||| |||||||||||||| ||| |||||||    
T  8443917 ttaattgtcactttttgacattttacacaaaccaagacaatcaataa 8443871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 13965846 - 13965800
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataa 195  Q
    |||||||||||||| ||||| |||||||||||||| ||| |||||||    
T  13965846 ttaattgtcactttttgacattttacacaaaccaagacaatcaataa 13965800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 14295761 - 14295831
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  14295761 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 14295831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 14308632 - 14308562
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  14308632 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 14308562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 26342819 - 26342749
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  26342819 ttaattgtcacgttttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 26342749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 1395794 - 1395729
Alignment:
Q  158 actttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||| ||||| |||||||||||||||||| | ||||||||| |||  || | |||||||||||||    
T  1395794 actttttgacattttacacaaaccaatacacttaataaatgttactttttcttatacaataattta 1395729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 4952700 - 4952765
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatac 214  Q
    |||||||||||||| ||||| |||||| ||||||| |   ||||||||||| ||||||||| ||||    
T  4952700 ttaattgtcactttttgacattttacataaaccaaaatgatcaataaatgttactacttttaatac 4952765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 219
Target Start/End: Original strand, 25558188 - 25558260
Alignment:
Q  147 tcttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||| ||||| || || ||||| |||||||||||||| ||| |||| || ||  |||||||||||||||||||    
T  25558188 tcttgattgttacattttgacattttacacaaaccaagacaatcaaaaattgatactacttttgatacaataa 25558260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 32543791 - 32543863
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||| ||| | ||| |||||| ||||||| ||| ||||||||| | |||| |||| |||||||||||    
T  32543791 ttaattgtcattttataacattttacataaaccaaaacaatcaataaatattactaatttttatacaataatt 32543863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 8e-33; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 36318591 - 36318516
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttac 224  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36318591 ttaattgtcactttttgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttac 36318516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 9127908 - 9127837
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  9127908 ttaattgtcactttttgacattttacacaaaccaagacattcaataaatgttactacttttgatacaataat 9127837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 30702288 - 30702362
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||| || ||||||||||||||| ||||    
T  30702288 ttaattgtcactttttgacattttacacaaaccaatacaatcaataaatgttaccacttttgatacaatatttta 30702362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 51974169 - 51974240
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| ||||| ||||||| |||||| ||||||||||||| | ||||||||||||||||||||    
T  51974169 ttaattgtcactttttgacattttacacgaaccaaaacattcaataaatattactacttttgatacaataat 51974240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 32348216 - 32348148
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  32348216 ttaattgtcacttt-tgacattttacacaaaccaatacaatcaataaatattactacttttgatacaata 32348148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 42800345 - 42800277
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||||||||||| |||||| ||||||||||    
T  42800345 ttaattgtcactttttgacattttacacaaaccaaaacaatcaataaatgttactactcttgatacaat 42800277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 40926751 - 40926821
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||| ||||||||||| ||||||| ||| |||||||||||||||||||    
T  40926751 ttaattgtcacattttgacattttacataaaccaatacaatcaataattgttactacttttgatacaataa 40926821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 31487777 - 31487850
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || ||||| |||||||||||||| ||| ||||||||| |  |||||||||||||||||||||    
T  31487777 ttaattgtcacattttgacattttacacaaaccaagacaatcaataaatattgctacttttgatacaataattt 31487850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 31570635 - 31570699
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgata 213  Q
    |||| |||||||||  | || |||||||||||||||||||||||||||||| |||||||||||||    
T  31570635 ttaagtgtcactttaaggcattttacacaaaccaatacattcaataaatgttactacttttgata 31570699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 32168310 - 32168378
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||||||| ||| ||||||||||  |||||||||||||||||    
T  32168310 ttaattgtcactttttgatattttacacaaaccaagacaatcaataaatggtactacttttgatacaat 32168378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 17013644 - 17013601
Alignment:
Q  170 tttacacaaaccaatacattcaataaatgtcactacttttgata 213  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  17013644 tttacacaaaccaatacattcaataaatgttactacttttgata 17013601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 37296747 - 37296790
Alignment:
Q  170 tttacacaaaccaatacattcaataaatgtcactacttttgata 213  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  37296747 tttacacaaaccaatacattcaataaatgttactacttttgata 37296790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 52649727 - 52649798
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| ||||| ||| ||| || ||| ||| ||||||||||| ||||||||||||||||||||    
T  52649727 ttaattgtcactttttgacatttttcactaatcaagacaatcaataaatgttactacttttgatacaataat 52649798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 36850876 - 36850802
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||| ||| ||| | |||||||||| ||| ||| ||||||||||| ||||||||||||| |||||||||    
T  36850876 ttaattgtcattttttgatattttacacaaatcaagacagtcaataaatgttactacttttgatataataattta 36850802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 35700373 - 35700445
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||| ||| ||| | |||||||||| ||| ||| ||||||||||| ||||||||||||| |||||||    
T  35700373 ttaattgtcattttgtgatattttacacaaatcaagacaatcaataaatgttactacttttgatataataatt 35700445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 51613650 - 51613582
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| | | | |||||||||||||| ||| ||||||||||  |||||||||||||||||    
T  51613650 ttaattgtcacttttttatattttacacaaaccaagacaatcaataaatgatactacttttgatacaat 51613582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 223
Target Start/End: Original strand, 19455413 - 19455471
Alignment:
Q  164 tgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||| |||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||    
T  19455413 tgacattttacacaaaccaagacaatcaataa-tgttactacttttgatacaataattta 19455471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 46096787 - 46096716
Alignment:
Q  147 tcttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||||||||| ||| | |||| ||| | ||||||| ||||||||| | ||||||||||||||||||    
T  46096787 tcttaattgtcactttttgatattttatacacatcaatacaatcaataaatattactacttttgatacaata 46096716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 19349377 - 19349447
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| |||||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  19349377 ttaattgtcacattctgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 19349447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 35605837 - 35605768
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||||| | ||||| |||||||||||||||||| ||||||||| | | || |||||||| ||||    
T  35605837 ttaattgtcactatttgacattttacacaaaccaatacaatcaataaatattattaattttgatataata 35605768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 48508372 - 48508299
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || ||||| |||| ||||||||| | | |||||||||||   ||||||||||||||||||||    
T  48508372 ttaattgtcacattttgacattttatacaaaccaaaataatcaataaatgttgttacttttgatacaataattt 48508299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 10507050 - 10506978
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||| ||| ||| | |||||||||| ||| ||| ||||||||| | |||||||||||| ||||||||    
T  10507050 ttaattgtcattttgtgatattttacacaaatcaagacaatcaataaatattactacttttgatgcaataatt 10506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 12721679 - 12721611
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| | ||| |||||| ||||||| ||| | ||||||| | |||||||||||||||||    
T  12721679 ttaattgtcactttttaacattttacataaaccaagacaataaataaatattactacttttgatacaat 12721611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 2059810 - 2059880
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| | | ||||||| ||| ||||| |||||| ||||||    
T  2059810 ttaattgtcacattttgacattttacacaaaccaaaataatcaataattgttactacatttgatgcaataa 2059880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 13566918 - 13566848
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  13566918 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 13566848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 18344565 - 18344491
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| | ||| |||||||||| ||||| | | ||||||| | || ||||||||||||||| ||||    
T  18344565 ttaattgtcactttttaacattttacacaaatcaatataattaataaatattaccacttttgatacaatacttta 18344491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 19929464 - 19929534
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||| ||| | ||| |||||||||||||| ||| ||||||| |||  ||||||||||| ||||||    
T  19929464 ttaattgtcattttttaacattttacacaaaccaagacaatcaataattgtttctacttttgatgcaataa 19929534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 29830992 - 29830922
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| ||||||| ||  | |||||||||| ||||||    
T  29830992 ttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatattacttttgatgcaataa 29830922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 32994467 - 32994537
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||  ||| ||||| |||||||||||||| ||| ||||||| | | |||||||||||| ||||||    
T  32994467 ttaattgtctttttttgacattttacacaaaccaagacaatcaataattattactacttttgatgcaataa 32994537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 35255725 - 35255655
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| |||||| ||||||| ||| ||||||| |||   |||||||||| ||||||    
T  35255725 ttaattgtcactttttgacattttacataaaccaagacaatcaataattgtttttacttttgatgcaataa 35255655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 35531293 - 35531363
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  35531293 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 35531363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 38597830 - 38597756
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||| ||||||||| ||||| ||||||||||| || ||| ||||||||||| |||  || | |||||||||||||    
T  38597830 ttaactgtcactttttgacattttacacaaactaagacactcaataaatgttactttttcttatacaataattta 38597756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 39412509 - 39412579
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| | ||| |||| ||||||||| ||| ||||||| |||  ||||||||||| ||||||    
T  39412509 ttaattgtcactttttaacattttatacaaaccaaaacaatcaataattgtttctacttttgatgcaataa 39412579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 43500745 - 43500675
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  43500745 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 43500675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 4100907 - 4100975
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||| | ||||| ||| | ||||||||||| || ||| ||||||||||| | |||||||||||||||    
T  4100907 ttaattattactttttgatattttacacaaactaagacaatcaataaatgttattacttttgatacaat 4100975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 5598284 - 5598216
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    ||||||||||  || ||||| |||||||||||||| ||| ||||||| | | |||||||||||| ||||    
T  5598284 ttaattgtcatattttgacattttacacaaaccaagacaatcaataattattactacttttgatgcaat 5598216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 37735137 - 37735205
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||| ||||||| | | | ||||| |||||||| ||| ||||||||||  |||||||||||||||||    
T  37735137 ttaattatcactttttcaaattttacgcaaaccaagacaatcaataaatgatactacttttgatacaat 37735205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 9958881 - 9958956
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttac 224  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9958881 ttaattgtcattttttgacaatttacacaaatcaatacattcaataaatgtcactacttttgatacaataatttac 9958956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 26906711 - 26906637
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| ||| | |||||||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  26906711 ttaattgtcactttttgatattttacacaaaccaaaacattcaataaatcttactacttttgatacaataattta 26906637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 12784441 - 12784509
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||| ||||||| ||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  12784441 ttaattctcactttttgacattttacacaaaccaagacaatcaataaatgttactacttttgatacaat 12784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 25027573 - 25027645
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||||||| ||||| |||||| |||| || ||| ||||||||||| |||||||||||||||||||||    
T  25027573 ttaattgtcactttgtgacattttacataaactaagacaatcaataaatgttactacttttgatacaataatt 25027645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 24229169 - 24229102
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaa 216  Q
    |||||||||  ||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  24229169 ttaattgtctttttctgatattttacacaaaccaagacattcaataaatgttactacttttgatacaa 24229102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 13461231 - 13461157
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| ||||| |||||||||||||||||| ||||||||||| |||  || | |||||||||||||    
T  13461231 ttaattgtcactttttgacattttacacaaaccaatacactcaataaatgttactttttgttatacaataattta 13461157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 18437321 - 18437395
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| ||| | |||||||||||||||||| ||||||||||| || | ||||||||||||| ||||    
T  18437321 ttaattgtcactttttgatattttacacaaaccaatacaatcaataaatgttaccatttttgatacaatacttta 18437395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 31803545 - 31803472
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    |||||||||||||| ||||| |||||||||| ||| ||| | ||||||||| ||||||||||||||||| ||||    
T  31803545 ttaattgtcactttttgacattttacacaaatcaagacaattaataaatgttactacttttgatacaattattt 31803472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 5842991 - 5843059
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||| ||||||| ||||| |||||| ||||||| ||| ||||||||||| |||||||||||||||||    
T  5842991 ttaattatcactttttgacattttacataaaccaagacaatcaataaatgttactacttttgatacaat 5843059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 12722957 - 12723025
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||| ||||||| ||||| |||||||||||||| ||| ||||||||| | |||||||||||||||||    
T  12722957 ttaattctcactttttgacattttacacaaaccaagacaatcaataaatattactacttttgatacaat 12723025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 37306697 - 37306765
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| | ||| |||||||||||||| ||| | ||||||||| |||||||||||||||||    
T  37306697 ttaattgtcactttttaacattttacacaaaccaagacaattaataaatgttactacttttgatacaat 37306765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 37633897 - 37633829
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||||||| ||| | ||||||||| |||||||||||||||||    
T  37633897 ttaattgtcactttttgatattttacacaaaccaagacaattaataaatgttactacttttgatacaat 37633829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 6008106 - 6008031
Alignment:
Q  149 ttaattgtcactttct-gacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| | || | |||||||||||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  6008106 ttaattgtcacttttttgatattttacacaaaccaatacaatcaataattgttactacttttgatacaatgattta 6008031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 24074836 - 24074906
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  24074836 ttaattgtcacattttgacattttacacaaaccaaaacaatcaataattgttactacttttgatgcaataa 24074906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 28446983 - 28447053
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| |||||||||||||| | | ||||||| ||| |||| ||||||||||||||    
T  28446983 ttaattgtcactttttgacattttacacaaaccaagataatcaataattgttactatttttgatacaataa 28447053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 32389207 - 32389134
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    |||||||||||||| | ||| |||||| ||||||| ||| ||||||| ||| ||||||||||||||||| ||||    
T  32389207 ttaattgtcactttttaacattttacataaaccaagacaatcaataagtgttactacttttgatacaattattt 32389134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 37809980 - 37809912
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||||||| ||| | ||||||||| |||||||||||| ||||    
T  37809980 ttaattgtcactttttgatattttacacaaaccaagacaattaataaatgttactacttttgatgcaat 37809912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 39893807 - 39893875
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| | ||| |||||||||||||| | | ||||||| ||| |||||||||||||||||    
T  39893807 ttaattgtcactttttaacattttacacaaaccaaaataatcaataagtgttactacttttgatacaat 39893875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 31546000 - 31546067
Alignment:
Q  152 attgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||| || ||||| |||||||||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  31546000 attgtcaccttttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataa 31546067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 7408552 - 7408478
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||||||||  || ||||| |||||||||||||| ||| ||||||||  | | |||||||||||||||||||||    
T  7408552 ttaattgtcatcttttgacattttacacaaaccaaaacaatcaataaacattaatacttttgatacaataattta 7408478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 38308130 - 38308196
Alignment:
Q  155 gtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||| ||||| |||||||||||||| ||| ||||||||||| |||  |||| |||||||||||    
T  38308130 gtcactttttgacattttacacaaaccaagacactcaataaatgttacttttttttatacaataatt 38308196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 42911771 - 42911701
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||| | |||||||||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  42911771 ttaattgtcacattttgatattttacacaaaccaagacaatcaataattgttactacttttgatgcaataa 42911701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 19831561 - 19831614
Alignment:
Q  170 tttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| ||| ||||||||||| | || ||||||||||||||||||    
T  19831561 tttacacaaaccaagacaatcaataaatgttaatatttttgatacaataattta 19831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 23418754 - 23418693
Alignment:
Q  162 tctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||||| |||||||||| ||| ||| ||||||||||| | ||| |||||||||||||||||    
T  23418754 tctgacattttacacaaatcaagacaatcaataaatgttattacctttgatacaataattta 23418693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 31985049 - 31985122
Alignment:
Q  150 taattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||| ||||||| ||||| |||||| ||| ||| ||| ||||||||||||| ||||||| ||| |||||||||    
T  31985049 taattatcactttttgacattttacataaatcaagacaatcaataaatgtcattacttttaatataataattta 31985122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 38297523 - 38297604
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttactccctc 230  Q
    |||||||||||||| | ||| |||||||||| ||| ||| ||||||| |||  ||||||||||| |||||| ||||| ||||    
T  38297523 ttaattgtcactttttaacattttacacaaaacaagacaatcaataattgtttctacttttgatgcaataagttactacctc 38297604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 12637945 - 12638013
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| | ||| |||||| ||| ||| ||| ||||||||| | |||||||||||||||||    
T  12637945 ttaattgtcactttttaacattttacataaatcaagacaatcaataaatattactacttttgatacaat 12638013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 13703318 - 13703250
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||| ||| ||| ||||||||| | |||| ||||||||||||    
T  13703318 ttaattgtcactttttgatattttacacaaatcaagacaatcaataaatattactatttttgatacaat 13703250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 4098552 - 4098482
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  | |||||||||||||||||    
T  4098552 ttaattgtcacattttgacattttacacaaaccaagacaatcaaaaattgatattacttttgatacaataa 4098482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 4985173 - 4985243
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||| ||||| ||| ||||||  ||| |||||||||||| ||||||    
T  4985173 ttaattgtcacattttgacattttacacataccaagacaatcaatagttgttactacttttgatgcaataa 4985243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 10359233 - 10359303
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  10359233 ttaattgtcacattttgacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataa 10359303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 14793788 - 14793858
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||||| | ||||||| | | |||| ||||||| ||||||    
T  14793788 ttaattgtcacattttgacattttacacaaaccaatataatcaataattattactatttttgatgcaataa 14793858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 16124258 - 16124328
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||| ||||||||| | ||||| | ||| |||||||||||| ||||||    
T  16124258 ttaattgtcacattttgacattttacataaaccaatatagtcaatgattgttactacttttgatgcaataa 16124328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 26854093 - 26854163
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| | | ||||||| ||  |||||||||||| ||||||    
T  26854093 ttaattgtcacattttgacattttacacaaaccaagataatcaataattgatactacttttgatgcaataa 26854163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 3244017 - 3243944
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    |||||||||| ||| ||||| |||||| ||| ||| ||| | ||||||||| |||| |||| ||||||||||||    
T  3244017 ttaattgtcattttttgacattttacataaatcaagacaattaataaatgttactattttttatacaataattt 3243944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 3686883 - 3686838
Alignment:
Q  177 aaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||| ||| |||||||||||  |||||||||||||||||||||    
T  3686883 aaaccaaaacaatcaataaatgttgctacttttgatacaataattt 3686838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 30368133 - 30368206
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    |||||||| || || | ||| ||||||||||| || ||| ||||||||||| |||| |||||||| ||||||||    
T  30368133 ttaattgttacattttaacattttacacaaactaagacaatcaataaatgttactatttttgatataataattt 30368206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 32439917 - 32439982
Alignment:
Q  156 tcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    ||||||| ||||| |||||||||||||| ||| ||||||||||| |||  || | |||||||||||    
T  32439917 tcactttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatt 32439982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 36481275 - 36481226
Alignment:
Q  170 tttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| |||  || |||||||||||||||||||||    
T  36481275 tttacacaaaccaaaacattaaatgtatttcactacttttgatacaataa 36481226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 38297620 - 38297688
Alignment:
Q  155 gtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||| ||||| ||||||||||| || ||| ||||||||||| |||  || | |||||||||||||    
T  38297620 gtcactttttgacattttacacaaactaagacactcaataaatgttactttttcttatacaataattta 38297688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 47408352 - 47408281
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  47408352 ttaattgtcactttttgacattttacacaaaccaagacattcaataaatgttactacttttgatacaataat 47408281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 35112668 - 35112599
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||||||| ||||| ||||||||||| |||||| ||||||||| | ||||||||||||||||||    
T  35112668 ttaattgtcactttttgacattttacacaaacaaatacaatcaataaatattactacttttgatacaata 35112599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 42841870 - 42841938
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  42841870 ttaattgtcactttttgatattttacacaaaccaagacaatcaataaatgttactacttttgatacaat 42841938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 33258120 - 33258051
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||| ||| ||||| |||||||||| ||||||| ||||||||| | ||||||||||||||||||    
T  33258120 ttaattgtcattttttgacattttacacaaatcaatacaatcaataaatattactacttttgatacaata 33258051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 43874087 - 43874164
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttactc 226  Q
    ||||| ||| |||| ||||| ||||||| ||| |||||||||||||||||| |||||||||||||||| ||| |||||    
T  43874087 ttaatggtctctttttgacattttacacgaacaaatacattcaataaatgttactacttttgatacaacaatatactc 43874164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 19327795 - 19327868
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || | ||| |||||||||||||| ||| ||||||||| |  |||||||||||||||||||||    
T  19327795 ttaattgtcacattttaacattttacacaaaccaaaacaatcaataaatattgctacttttgatacaataattt 19327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 9601897 - 9601967
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||  |||||||||||||| ||||| |||  || |||||||||||||||||||||    
T  9601897 ttaattgtcacattttgactttttacacaaaccaagacattaaatgtatttcactacttttgatacaataa 9601967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 9829468 - 9829538
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||  |||||||||||||| ||||| |||  || |||||||||||||||||||||    
T  9829468 ttaattgtcacattttgactttttacacaaaccaagacattaaatgtatttcactacttttgatacaataa 9829538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 36298178 - 36298248
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||| ||| ||| ||||||| ||| |||||||||||| ||||||    
T  36298178 ttaattgtcacattttgacattttacacaaatcaaaacaatcaataattgttactacttttgatgcaataa 36298248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 28608833 - 28608760
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||  || ||| | |||||||||| ||| ||| |||||||||||  |||||||||||||||||||||    
T  28608833 ttaattgtcatattttgatattttacacaaatcaagacaatcaataaatgttgctacttttgatacaataattt 28608760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 18194218 - 18194286
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||| ||| | | | |||||||||||||| ||| ||||||||||  |||||||||||||||||    
T  18194218 ttaattgtcagtttttcaaattttacacaaaccaagacaatcaataaatgatactacttttgatacaat 18194286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 30866740 - 30866814
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||| ||||| ||| ||||| |||||||||||||| ||| ||||||||||| |||  || | |||||||||||||    
T  30866740 ttaactgtcattttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataattta 30866814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 33174046 - 33173976
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||| ||||||| | | ||||| | ||| |||||||||||||||||||    
T  33174046 ttaattgtcacattttgacattttacataaaccaaaatagtcaatgattgttactacttttgatacaataa 33173976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 41888998 - 41889048
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgt 199  Q
    |||||| ||||||| ||||| |||||||||||||| ||| |||||||||||    
T  41888998 ttaattatcactttgtgacattttacacaaaccaagacaatcaataaatgt 41889048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 35746649 - 35746722
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    |||||||||||||| | ||| |||||| |||  || ||| ||||||||||| |||| |||||||||||| ||||    
T  35746649 ttaattgtcactttttaacattttacataaattaagacaatcaataaatgttactatttttgatacaattattt 35746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 1553752 - 1553688
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgata 213  Q
    |||| |||||||||  || | |||| ||||||||||| ||| ||||||||| |||||||||||||    
T  1553752 ttaagtgtcactttaagatattttatacaaaccaatatatttaataaatgttactacttttgata 1553688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 246
Target Start/End: Original strand, 25098240 - 25098268
Alignment:
Q  218 aatttactccctccgtccctatatgtaac 246  Q
    |||||||||||||||||||||||||||||    
T  25098240 aatttactccctccgtccctatatgtaac 25098268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 23777535 - 23777464
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| ||||| |||||||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  23777535 ttaattgtcactttttgacattttacacaaaccaagacattaaataaatgttactacttttgatacaataat 23777464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 26485687 - 26485758
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| ||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  26485687 ttaattgtcactttttgacattttacataaaccaagacattcaataaatgttactacttttgatacaataat 26485758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 22400566 - 22400630
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgata 213  Q
    |||| |||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  22400566 ttaagtgtcactttaagacattttacacaaaccaatacattcaataaatgttactacttttgata 22400630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 9838124 - 9838196
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||| ||| ||| | |||||||||| ||| ||| ||||||||||| |||||||||||||||||||||    
T  9838124 ttaattgtcattttgtgatattttacacaaatcaaaacaatcaataaatgttactacttttgatacaataatt 9838196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 11129070 - 11129002
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||||| |||||||||| ||| ||| | ||||||||| |||||||||||||||||    
T  11129070 ttaattgtcactttttgacattttacacaaatcaagacaattaataaatgttactacttttgatacaat 11129002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 22784670 - 22784741
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| | ||| |||||| ||||||| | ||||||||||||  ||||||||||||||||||||    
T  22784670 ttaattgtcactttttaacattttacataaaccaagatattcaataaatgatactacttttgatacaataat 22784741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 17601135 - 17601209
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||||||||| || ||||  ||||||||||| || ||| |||||||||||  ||||||||||||||||||||||    
T  17601135 ttaattgtcacattttgacgttttacacaaactaagacaatcaataaatgttgctacttttgatacaataattta 17601209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 22050287 - 22050217
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  22050287 ttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataa 22050217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 26470725 - 26470795
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| |||||| ||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  26470725 ttaattgtcactttttgacattttacataaaccaagacaatcaataattgttactacttttgatgcaataa 26470795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 24949346 - 24949273
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    |||||||| | ||| ||| | |||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||    
T  24949346 ttaattgttattttttgatattttacacaaaccaaaacaatcaataaatgttactacttttgatacaattattt 24949273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 11676617 - 11676685
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||| ||||| ||| | |||||||||||||| ||| ||||||||| | |||||||||||||||||    
T  11676617 ttaattgttactttttgatattttacacaaaccaagacaatcaataaatattactacttttgatacaat 11676685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 19645724 - 19645788
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgata 213  Q
    |||||||||||||| ||||| ||||||||||| || ||| |||||| |||| |||||||||||||    
T  19645724 ttaattgtcactttttgacattttacacaaactaagacaatcaatagatgttactacttttgata 19645788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 34607337 - 34607270
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaa 216  Q
    |||||||| | ||| ||||| |||| ||||||||| ||||||||| ||||| ||||||||||||||||    
T  34607337 ttaattgttaatttttgacattttatacaaaccaagacattcaatgaatgttactacttttgatacaa 34607270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 17251257 - 17251326
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaa-taaatgtcactacttttgatacaat 217  Q
    |||||||||||||| | ||| |||||||||||||| ||| |||| ||| ||| |||||||||||||||||    
T  17251257 ttaattgtcactttttaacattttacacaaaccaagacaatcaattaagtgttactacttttgatacaat 17251326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 24356056 - 24356121
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatac 214  Q
    |||||||||||||| ||| | ||||  |||||||| ||| ||||||||||| ||||||||||||||    
T  24356056 ttaattgtcactttttgatattttatccaaaccaaaacaatcaataaatgttactacttttgatac 24356121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 1249778 - 1249706
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||||||| ||| | |||| | |||| || ||| ||||||||||| |||| ||||||||||||||||    
T  1249778 ttaattgtcactttatgatattttatataaactaagacaatcaataaatgttactatttttgatacaataatt 1249706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 30416092 - 30416147
Alignment:
Q  164 tgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||| |||||| ||||||| ||| ||||||| ||| |||||||||||||||||||    
T  30416092 tgacattttacataaaccaagacaatcaataattgttactacttttgatacaataa 30416147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 1135183 - 1135253
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| |||||| | ||| ||| | ||||||||||| | ||||||||||| |||||    
T  1135183 ttaattgtcactttttgacattttacagagaccgataaactcaataaatgttattacttttgatataataa 1135253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 3621829 - 3621759
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  3621829 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 3621759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 8176672 - 8176602
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| | ||| |||||||||| ||| ||| ||||||| |||  ||||||||||| ||||||    
T  8176672 ttaattgtcactttttaacattttacacaaatcaagacaatcaataattgtttctacttttgatgcaataa 8176602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 17123987 - 17124057
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| ||||||||||| || ||| ||||||| ||  |||||||||||| ||||||    
T  17123987 ttaattgtcacattttgacattttacacaaactaagacaatcaataattgatactacttttgatgcaataa 17124057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 34730778 - 34730732
Alignment:
Q  170 tttacacaaaccaatacattcaataaatgtcactacttttgatacaa 216  Q
    |||| ||||||||| ||||||||| ||||| ||||||||||||||||    
T  34730778 tttatacaaaccaagacattcaatgaatgttactacttttgatacaa 34730732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 31244751 - 31244819
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    ||||||||||| || |||   |||||||||||||| ||| ||||||||||  | |||||||||||||||    
T  31244751 ttaattgtcacattttgattttttacacaaaccaagacaatcaataaatggtagtacttttgatacaat 31244819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 34379098 - 34379026
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||| ||||||||| ||| | |||||||||||||| ||| ||||||||||| |||  || | |||||||||||    
T  34379098 ttaactgtcactttttgatattttacacaaaccaagacactcaataaatgttactttttcttatacaataatt 34379026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 221
Target Start/End: Original strand, 419494 - 419566
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||||||| ||||| |||||| ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  419494 ttaattgtcactttgtgacattttacataaaccaagacaatcaataaatgttactacttttgatacaataatt 419566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 37502261 - 37502190
Alignment:
Q  152 attgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||||||||| ||||| |||| ||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  37502261 attgtcactttttgacattttatacaaaccaagacaatcaataaatgttactacttttgatacaataattta 37502190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 47596615 - 47596685
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||| ||| ||||| |||||||||||||||| | ||||||||||| |||||||||||||||||||    
T  47596615 ttaattgtcattttttgacattttacacaaaccaataaagtcaataaatgttactacttttgatacaataa 47596685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 26933780 - 26933846
Alignment:
Q  155 gtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||| ||||| |||||||||||||| ||| ||||||||||| ||||||||||| |||||||||    
T  26933780 gtcactttgtgacattttacacaaaccaaaacaatcaataaatgttactacttttgacacaataatt 26933846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 31984154 - 31984224
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  31984154 ttaattgtcactttttgacattttacacaaaccaacacaatcaataattgttactacttttgatgcaataa 31984224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 45725778 - 45725708
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||| ||| ||||| ||||||||||| |||| | ||||||||||| |||||||||||||||||||    
T  45725778 ttaattgtcattttttgacattttacacaaacaaataaagtcaataaatgttactacttttgatacaataa 45725708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 213
Target Start/End: Complemental strand, 31370043 - 31369979
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgata 213  Q
    |||| |||||||||  |||| |||||||||||||||||||||||||||||| | |||||||||||    
T  31370043 ttaagtgtcactttaagacattttacacaaaccaatacattcaataaatgttattacttttgata 31369979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 44176591 - 44176662
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||| | ||| |||||| ||||||| ||||| ||||||| | ||||||||||||||||||||    
T  44176591 ttaattgtcactttttaacattttacataaaccaaaacatttaataaatattactacttttgatacaataat 44176662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 42629559 - 42629485
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||| ||| ||| | |||||||||||||| ||| ||||||||||| |||||||||| |||| |||||||    
T  42629559 ttaattgtcattttttgatattttacacaaaccaagacaatcaataaatgttactacttttggtacagtaattta 42629485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 30151914 - 30151837
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttactc 226  Q
    ||||||||| |||| | | | |||||||||||||| ||||||||||||||| ||| |||||||||||| ||| |||||    
T  30151914 ttaattgtctctttttaatattttacacaaaccaagacattcaataaatgttactgcttttgatacaacaatatactc 30151837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 33809329 - 33809261
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| | ||| |||||||||| ||| ||| ||||||||||| |||||||||||| ||||    
T  33809329 ttaattgtcactttttaacattttacacaaatcaaaacaatcaataaatgttactacttttgatgcaat 33809261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 47751772 - 47751700
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||||||| ||||| |||||||||||||| | | |  |||||||| |||| ||||||||||||||||    
T  47751772 ttaattgtcactttgtgacattttacacaaaccaaaataatttataaatgttactatttttgatacaataatt 47751700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 23719786 - 23719857
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||| | ||| ||||| |||||| |||| || ||||||||||||| | ||||||||||||||||||||    
T  23719786 ttaattgttattttttgacattttacataaactaagacattcaataaatattactacttttgatacaataat 23719857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 52057468 - 52057522
Alignment:
Q  164 tgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    ||||| ||||||||||||||| || ||||||||| | ||||||||||||||||||    
T  52057468 tgacattttacacaaaccaatccaatcaataaatattactacttttgatacaata 52057522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 54231781 - 54231711
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||| ||| ||||| |||||||||| ||| ||| ||||||| ||| |||||||||||| ||||||    
T  54231781 ttaattgtcattttttgacattttacacaaatcaagacaatcaataattgttactacttttgatgcaataa 54231711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 9220043 - 9220111
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||| ||| ||| | ||||||| | |||||||||||||||||    
T  9220043 ttaattgtcactttttgaaattttacacaaaacaagacaattaataaatcttactacttttgatacaat 9220111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 42133279 - 42133211
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    ||||||||||||||   | | |||||||||||||| ||| ||||||||||| |||| ||||||||||||    
T  42133279 ttaattgtcacttttcaatattttacacaaaccaaaacaatcaataaatgttactatttttgatacaat 42133211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 29511285 - 29511218
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaa 216  Q
    ||||||||||| || ||||| |||||| ||||||| | |||  |||||||| ||||||||||||||||    
T  29511285 ttaattgtcaccttttgacattttacataaaccaagaaatttcataaatgttactacttttgatacaa 29511218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 29832362 - 29832449
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatttactccctccgtccc 236  Q
    ||||||||| | || ||||| |||||  | ||||| ||| ||||||| ||| || ||||||||| |||||| ||||||||||||||||    
T  29832362 ttaattgtctccttttgacattttacttataccaagacaatcaataattgttacaacttttgatgcaataagttactccctccgtccc 29832449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 34361276 - 34361229
Alignment:
Q  170 tttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    ||||||||||| || ||| ||||||||||| |||||||||||||||||    
T  34361276 tttacacaaactaagacaatcaataaatgttactacttttgatacaat 34361229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 6195266 - 6195196
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| ||| |||||||||| ||| || |||| ||  |||||||||||| ||||||    
T  6195266 ttaattgtcactttttgacatttttcacaaaccaagacaatccataattgctactacttttgatgcaataa 6195196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 14949086 - 14949156
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||| ||| || ||||  |||||||||||||||||| | |||  || |||||||||||||||||||||    
T  14949086 ttaattgccacattttgacgttttacacaaaccaatacactaaatgtatttcactacttttgatacaataa 14949156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 18135052 - 18135126
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcacta-cttttgatacaataattt 222  Q
    ||||||||||  || ||||| |||||||||||||| ||| ||||||||| | ||||  |||||||||||||||||    
T  18135052 ttaattgtcatattttgacattttacacaaaccaaaacaatcaataaatattactattttttgatacaataattt 18135126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 19093155 - 19093225
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||| ||||||| | | ||||||| ||| |||||||||||| ||||||    
T  19093155 ttaattgtcacattttgacattttacataaaccaagatagtcaataattgttactacttttgatgcaataa 19093225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 22828403 - 22828473
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| |||  |||||| ||  |||||||||||| ||||||    
T  22828403 ttaattgtcacattttgacattttacacaaaccaagacaaccaataattgctactacttttgatgcaataa 22828473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 38009768 - 38009838
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||  |||||||||||||| ||| | |||  || |||||||||||||||||||||    
T  38009768 ttaattgtcacattttgactttttacacaaaccaagacactaaatgtatttcactacttttgatacaataa 38009838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 38542278 - 38542348
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||| ||| ||||| |||||| ||||||| ||| | ||||| ||| |||||||||||| ||||||    
T  38542278 ttaattgtcattttttgacattttacataaaccaagacaattaataattgttactacttttgatgcaataa 38542348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 42099950 - 42099880
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |  ||||||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  42099950 ttaattgtcacattttgacattaaacacaaaccaagacaatcaataattgttactacttttgatgcaataa 42099880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 44069273 - 44069203
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  44069273 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 44069203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 44217948 - 44217878
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  44217948 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 44217878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 49122262 - 49122336
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcacta-cttttgatacaataattt 222  Q
    ||||||||||  || ||||| |||||||||||||| ||| ||||||||| | ||||  |||||||||||||||||    
T  49122262 ttaattgtcatattttgacattttacacaaaccaaaacaatcaataaatattactattttttgatacaataattt 49122336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 50623655 - 50623585
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || | ||| |||||||||||||| ||| |||| || ||  |||||||||||||||||||    
T  50623655 ttaattgtcacattttaacattttacacaaaccaagacaatcaaaaattgatactacttttgatacaataa 50623585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 53691678 - 53691724
Alignment:
Q  171 ttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    ||||||||||||| ||| ||||||||||  |||||||||||||||||    
T  53691678 ttacacaaaccaagacaatcaataaatgatactacttttgatacaat 53691724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 36292849 - 36292792
Alignment:
Q  158 actttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgataca 215  Q
    ||||| ||||| ||||||| |||||| ||| ||||||||||| |||||||| ||||||    
T  36292849 actttttgacattttacactaaccaaaacaatcaataaatgttactactttcgataca 36292792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 19399765 - 19399701
Alignment:
Q  159 ctttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||| ||||| |||||||||||||| ||| ||||||||||| |||  || | |||||||||||||    
T  19399765 ctttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataattta 19399701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 43888223 - 43888156
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||| ||||||| | | ||||||||||| ||||| |||||||||||    
T  43888223 ttaattgtcactttttgatattttacataaaccaagagaatcaataaatgttactac-tttgatacaat 43888156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 46872161 - 46872093
Alignment:
Q  151 aattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  46872161 aattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 46872093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 49089148 - 49089080
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | ||||| | |||||| ||| ||||||||| | ||||| |||||||||||    
T  49089148 ttaattgtcactttttgatattttactcgaaccaagacaatcaataaatattactacgtttgatacaat 49089080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 14061150 - 14061224
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| | ||| |||||||||||||| ||| ||||||||| | |||||||||||||||||||||||    
T  14061150 ttaattgtcactttttaacattttacacaaaccaagacaatcaataaatattactacttttgatacaataattta 14061224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 26740138 - 26740206
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||||||| ||| |||||||||||||||||    
T  26740138 ttaattgtcactttttgacattttacacaaaccaagacaatcaataagtgttactacttttgatacaat 26740206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 31964808 - 31964736
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||||| ||| ||||| |||||||||||||| ||| ||||||||||| |||| ||||||||||||||||    
T  31964808 ttaattgtcattttatgacattttacacaaaccaagacaatcaataaatgttactatttttgatacaataatt 31964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 43553278 - 43553206
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    ||||||||| |||| ||||| ||||| |||||||| ||| ||||||||||| |||||||||||||||||||||    
T  43553278 ttaattgtcgctttgtgacattttacgcaaaccaagacaatcaataaatgttactacttttgatacaataatt 43553206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 2888469 - 2888542
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || | ||| |||||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  2888469 ttaattgtcacattttaacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataattt 2888542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 18842768 - 18842695
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || ||||| |||||||||| ||| | | ||||||||||| ||||||||||||||||||||||    
T  18842768 ttaattgtcacattttgacattttacacaaatcaagataatcaataaatgttactacttttgatacaataattt 18842695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 8554019 - 8554090
Alignment:
Q  151 aattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||| || ||||| |||||||||| ||| ||| |||||||||||  |||||||||||||||||||||    
T  8554019 aattgtcacattttgacattttacacaaatcaagacaatcaataaatgttgctacttttgatacaataattt 8554090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 12248771 - 12248842
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    ||||||| || ||| ||||| ||||||| |||||| ||||||||||||| | ||||||||||||||||||||    
T  12248771 ttaattgacagtttttgacattttacacgaaccaagacattcaataaatattactacttttgatacaataat 12248842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 41643491 - 41643561
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||| | ||| ||||| |||||||||||||||| | ||||||||||| ||||||||||||| |||||    
T  41643491 ttaattgtaattttttgacattttacacaaaccaataaagtcaataaatgttactacttttgatataataa 41643561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 43641990 - 43642060
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| ||||||||||| || ||| ||||||| ||| |||||||||||| ||||||    
T  43641990 ttaattgtcactttttgacattttacacaaactaagacaatcaataattgttactacttttgatgcaataa 43642060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 23855796 - 23855727
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    ||||| |||| ||| ||||| |||||| ||||||||||| ||||||||| | ||||||||||||||||||    
T  23855796 ttaatcgtcattttttgacattttacataaaccaatacaatcaataaatattactacttttgatacaata 23855727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 14511431 - 14511499
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||||||| ||| | ||||||||| |||| ||||||||||||    
T  14511431 ttaattgtcactttttgaaattttacacaaaccaagacaattaataaatgttactatttttgatacaat 14511499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 1245551 - 1245481
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| |||||| ||| ||| ||| ||||||| ||| |||||||||||| ||||||    
T  1245551 ttaattgtcactttttgacattttacataaatcaagacaatcaataattgttactacttttgattcaataa 1245481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 6661192 - 6661122
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||  |||||||||||||| ||| | |||| || |||||||||||||||||||||    
T  6661192 ttaattgtcacattttgactttttacacaaaccaacacactaaatatatttcactacttttgatacaataa 6661122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 6741594 - 6741524
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||  |||||||||||||| ||| | |||| || |||||||||||||||||||||    
T  6741594 ttaattgtcacattttgactttttacacaaaccaacacactaaatatatttcactacttttgatacaataa 6741524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 29091086 - 29091148
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttga 211  Q
    |||||||||||||| ||||| |||||||||| ||| ||| ||||||||| | |||||||||||    
T  29091086 ttaattgtcactttttgacattttacacaaatcaagacaatcaataaatattactacttttga 29091148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 32010085 - 32010159
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||||||||||| | ||| ||| |||||||||| ||| ||||||| ||  |||||||||||| ||||||||||    
T  32010085 ttaattgtcactttttaacatttttcacaaaccaagacaatcaataattgctactacttttgatgcaataattta 32010159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 33935061 - 33935131
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| ||||||| ||  |||||||||||| ||||||    
T  33935061 ttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatactacttttgatgcaataa 33935131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 17074583 - 17074656
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || | ||| |||||||||||||| ||| ||||||||| |  ||||||||||| |||||||||    
T  17074583 ttaattgtcacattttaacattttacacaaaccaagacaatcaataaatattgctacttttgatgcaataattt 17074656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 17573687 - 17573614
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || | ||| |||||||||||||| ||| ||||||||| |  ||||||||||| |||||||||    
T  17573687 ttaattgtcacattttaacattttacacaaaccaagacaatcaataaatattgctacttttgatgcaataattt 17573614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 27911688 - 27911741
Alignment:
Q  164 tgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    ||||| |||||||||| ||| ||| ||||||||||| |||||||||||||||||    
T  27911688 tgacattttacacaaatcaagacaatcaataaatgttactacttttgatacaat 27911741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 27958107 - 27958160
Alignment:
Q  164 tgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    ||||| |||||||||| ||| ||| ||||||||||| |||||||||||||||||    
T  27958107 tgacattttacacaaatcaagacaatcaataaatgttactacttttgatacaat 27958160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 13174168 - 13174096
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||| ||||||||| ||||| |||||||||||||| ||| ||||||||||| |||  || | |||||||||||    
T  13174168 ttaactgtcactttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatt 13174096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 35052361 - 35052305
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactac 205  Q
    |||| |||||||||  |||| |||||||||| ||||||||||||||||||| |||||    
T  35052361 ttaagtgtcactttaagacattttacacaaatcaatacattcaataaatgttactac 35052305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 38222045 - 38222001
Alignment:
Q  155 gtcactttctgacaatttacacaaaccaatacattcaataaatgt 199  Q
    |||||||| ||||| |||||||||||||| |||||||||||||||    
T  38222045 gtcactttttgacactttacacaaaccaagacattcaataaatgt 38222001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 35498082 - 35498145
Alignment:
Q  160 tttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||||| | |||||||||||||| ||| |  |||||||| ||||||||||||| |||||||||    
T  35498082 tttctgaaattttacacaaaccaagacaattcataaatgttactacttttgatataataattta 35498145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 167478 - 167548
Alignment:
Q  149 ttaattgtcactttctgacaattt-acacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||||||| | |  |||| ||||||||||||| | ||||||||| | ||||||||||||||||||    
T  167478 ttaattgtcacttttttaacatttcacacaaaccaatataatcaataaatattactacttttgatacaata 167548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 8453237 - 8453307
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| ||||||||||| || | | ||||||| ||| |||||||||||| ||||||    
T  8453237 ttaattgtcacattttgacattttacacaaactaagataatcaataattgttactacttttgatgcaataa 8453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 23848557 - 23848627
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| || ||||||||||| ||| ||||||| ||  |||||||||||| ||||||    
T  23848557 ttaattgtcacattttgacatttgacacaaaccaagacaatcaataattgatactacttttgatgcaataa 23848627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 30205695 - 30205621
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||||||||| || |||   |||||||||||||| ||| | |||  || |||||||||||||||||||||||||    
T  30205695 ttaattgtcacattttgattttttacacaaaccaagacactaaatgtatttcactacttttgatacaataattta 30205621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 45317891 - 45317821
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||  |||||||||||||| ||| | |||  || |||||||||||||||||||||    
T  45317891 ttaattgtcacattttgactttttacacaaaccaagacactaaatgtatttcactacttttgatacaataa 45317821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 35029785 - 35029716
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||| ||| | ||| |||| ||||| ||||| | || |||||| ||||||||||||||||||||    
T  35029785 ttaattgtcattttttaacattttatacaaatcaatataatccataaatatcactacttttgatacaata 35029716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 3720919 - 3720851
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| | ||| ||||||||||| || ||| ||||||| | | ||| |||||||||||||    
T  3720919 ttaattgtcactttttaacattttacacaaactaaaacaatcaataagtttgactgcttttgatacaat 3720851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 8672733 - 8672665
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||| ||| ||| | |||||||||||||| | | ||||||||||| | || ||||||||||||    
T  8672733 ttaattgtcattttttgatattttacacaaaccaaaataatcaataaatgttattatttttgatacaat 8672665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 19972512 - 19972468
Alignment:
Q  155 gtcactttctgacaatttacacaaaccaatacattcaataaatgt 199  Q
    |||||||| ||||| |||||||||||||| ||| |||||||||||    
T  19972512 gtcactttttgacattttacacaaaccaagacactcaataaatgt 19972468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 21020321 - 21020365
Alignment:
Q  155 gtcactttctgacaatttacacaaaccaatacattcaataaatgt 199  Q
    |||||||| ||||| |||||||||||||| ||| |||||||||||    
T  21020321 gtcactttttgacattttacacaaaccaagacactcaataaatgt 21020365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 48214294 - 48214225
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||||||| ||||| |||||||| ||||||||| ||||||||| | ||||||||||||||||||    
T  48214294 ttaattgtcactttttgacattttacacacaccaatacaatcaataaatattactacttttgatacaata 48214225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 33874553 - 33874621
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||| ||| ||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  33874553 ttaattgtcattttttgacattttacacaaaccaaaacaatcaataaatgttactacttttgatacaat 33874621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 3643203 - 3643276
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    |||| ||||||||| ||||| |||||||||| ||||||| |||| |||||| ||||||||||||||||| ||||    
T  3643203 ttaagtgtcactttttgacattttacacaaatcaatacaatcaagaaatgttactacttttgatacaattattt 3643276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 29458210 - 29458283
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||| ||||| || ||||| |||||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  29458210 ttaatcgtcacattttgacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataattt 29458283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 41425868 - 41425795
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || | ||| |||||||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  41425868 ttaattgtcacattttaacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataattt 41425795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 32853367 - 32853435
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||| ||||| ||||| ||||||||||| || ||| ||||||||||| |||||||||||||||||    
T  32853367 ttaattgtaactttttgacattttacacaaactaagacaatcaataaatgttactacttttgatacaat 32853435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 51065122 - 51065054
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||| ||||||| | ||| |||||||||||||| ||| ||||||||||| |||||||||||||||||    
T  51065122 ttaattatcactttttaacattttacacaaaccaagacaatcaataaatgttactacttttgatacaat 51065054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 24071 - 24142
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||| ||||||||| ||||| |||||| ||||||| ||||| ||||||| | ||||||||||||||||||||    
T  24071 ttaagtgtcactttgtgacattttacataaaccaagacatttaataaatattactacttttgatacaataat 24142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 41351201 - 41351272
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataat 220  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||| ||||| ||||||||||||| ||||||    
T  41351201 ttaattgtcactttctgatattttacataaatcaagacattcaattaatgttactacttttgatataataat 41351272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 222
Target Start/End: Original strand, 33074289 - 33074358
Alignment:
Q  153 ttgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||| || ||||| |||||||||||||| ||| ||||||||||   |||||||||||||||||||||    
T  33074289 ttgtcacattttgacattttacacaaaccaagacaatcaataaatgctgctacttttgatacaataattt 33074358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 40318935 - 40319008
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || | ||| |||||||||||||| | | |||||||||||  |||||||||||||||||||||    
T  40318935 ttaattgtcacattttaacattttacacaaaccaagataatcaataaatgttgctacttttgatacaataattt 40319008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 20848731 - 20848799
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||| |||||| || ||||| |||||||||||||| | | ||||||||||| |||||||||||||||||    
T  20848731 ttaactgtcacattttgacattttacacaaaccaaaataatcaataaatgttactacttttgatacaat 20848799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 11473641 - 11473567
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    ||||||||| |||| ||||| ||||||||||| || ||||||||||||||| |||  || | |||||||||||||    
T  11473641 ttaattgtcgctttttgacattttacacaaactaagacattcaataaatgttactttttcttatacaataattta 11473567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 27039619 - 27039685
Alignment:
Q  155 gtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataatt 221  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||| |||  || | |||||||||||    
T  27039619 gtcactttttgacattttacacaaaccaagacattcaataaatgttactttttcttatacaataatt 27039685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 32980879 - 32980809
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| ||||||| ||| | |||||||||| ||||||    
T  32980879 ttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttaatacttttgatgcaataa 32980809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 39866856 - 39866926
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||||| |||||||||||||| ||| ||||||| |||   |||||||||| ||||||    
T  39866856 ttaattgtcactttttgacattttacacaaaccaagacaatcaataattgtttttacttttgatgcaataa 39866926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 2858584 - 2858657
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||||| || | ||| |||||||| ||||| ||| |||||||| ||  |||||||||||||||||||||    
T  2858584 ttaattgtcacattttaacattttacacagaccaagacaatcaataaaggttgctacttttgatacaataattt 2858657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 222
Target Start/End: Original strand, 36370861 - 36370908
Alignment:
Q  175 acaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    ||||||||| ||| |||||||||||  |||||||||||||||||||||    
T  36370861 acaaaccaagacaatcaataaatgttgctacttttgatacaataattt 36370908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 27992479 - 27992409
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| ||||||||| |||||||| |||| || ||  |||||||||||| ||||||    
T  27992479 ttaattgtcacattttgacattttacacaacccaatacaatcaacaattgatactacttttgatgcaataa 27992409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 35315371 - 35315301
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||| ||| ||||| |||||||||| ||| ||| |||| || ||| |||||||||||| ||||||    
T  35315371 ttaattgtcattttttgacattttacacaaatcaagacaatcaacaattgttactacttttgatgcaataa 35315301  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 47069864 - 47069934
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  47069864 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 47069934  T

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Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 3114397 - 3114469
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattt 222  Q
    |||||||||||||| | | | ||||| |||||||| ||| ||| ||||||| ||||||||| ||||||||||||    
T  3114397 ttaattgtcactttttaatattttactcaaaccaa-acaatcagtaaatgttactacttttaatacaataattt 3114469  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 40139862 - 40139911
Alignment:
Q  170 tttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    |||||||||||||| ||| ||||||| ||| |||||||||||| ||||||    
T  40139862 tttacacaaaccaagacaatcaataattgttactacttttgatgcaataa 40139911  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 48152224 - 48152155
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaata 218  Q
    |||||||||| ||| | | | |||||||||| ||||||| ||||||||| | | ||||||||||||||||    
T  48152224 ttaattgtcatttttttatattttacacaaatcaatacaatcaataaatattattacttttgatacaata 48152155  T

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Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 47104162 - 47104226
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgata 213  Q
    ||||||| |||||| ||||| |||||| ||| ||| ||| ||||||||||| |||| ||||||||    
T  47104162 ttaattgccactttttgacattttacataaatcaaaacaatcaataaatgttactatttttgata 47104226  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 147129 - 147197
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||||| |||||||||| ||| ||| | ||||||||| |||||||||||||||||    
T  147129 ttaattgtcactttttgacattttacacaaatcaaaacaattaataaatgttactacttttgatacaat 147197  T

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Target: scaffold0343 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 7663 - 7595
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||| ||| ||| ||||||||| | |||||||||||||||||    
T  7663 ttaattgtcactttttgatattttacacaaatcaagacaatcaataaatattactacttttgatacaat 7595  T

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Target: scaffold2146 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 791 - 717
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataattta 223  Q
    |||||| ||||||| | ||| |||||| ||| ||||||| ||||||||| | ||||||| |||||||||||||||    
T  791 ttaattttcactttttaacattttacataaatcaatacaatcaataaatataactacttctgatacaataattta 717  T

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Target: scaffold0135 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 30694 - 30762
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaat 217  Q
    |||||||||||||| ||| | |||||||||| ||| ||| | ||||||| | |||||||||||||||||    
T  30694 ttaattgtcactttttgaaattttacacaaaacaagacaattaataaatcttactacttttgatacaat 30762  T

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Target: scaffold0280 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 8393 - 8323
Alignment:
Q  149 ttaattgtcactttctgacaatttacacaaaccaatacattcaataaatgtcactacttttgatacaataa 219  Q
    ||||||||||| || ||||| |||||||||||||| ||| |||| || ||  |||||||||||| ||||||    
T  8393 ttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataa 8323  T

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Target: scaffold0274 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 216
Target Start/End: Original strand, 262 - 308
Alignment:
Q  170 tttacacaaaccaatacattcaataaatgtcactacttttgatacaa 216  Q
    |||| ||||||||| ||||||||| ||||| ||||||||||||||||    
T  262 tttatacaaaccaagacattcaatgaatgttactacttttgatacaa 308  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 14763 - 14795
Alignment:
Q  189 tcaataaatgtcactacttttgatacaataatt 221  Q
    ||||||||||| |||||||||||||||||||||    
T  14763 tcaataaatgttactacttttgatacaataatt 14795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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