View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9065_low_8 (Length: 329)
Name: NF9065_low_8
Description: NF9065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9065_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 18 - 313
Target Start/End: Complemental strand, 42164798 - 42164503
Alignment:
| Q |
18 |
atctccaaaattgtcatctaaatatgcataaaactgcattctatacacctcaccatgtaattgtgtcagggtgcatggggttgcgcttgggcgtataaac |
117 |
Q |
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| T |
42164798 |
atctccaaaattgtcatctaaatatgcataaaactgcattctatacacctcaccatgtaattgtgtcaggctgcatggggttgcgcttgggcgtataaac |
42164699 |
T |
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| Q |
118 |
aacaactccaaaacacttcatacaaatctattgcgattggacgcaaatcttttgcgcctaggcttaaattggaaaaatgactagaaaatatattaagaca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
42164698 |
aacaactccaaaacacttcatacaaatctattgcgattggacgcaaatcttttgcgcctaggcttaaattggaaaaatgactagcaaatatattaagaca |
42164599 |
T |
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| Q |
218 |
ttataagggttaagaagtggaggttcaaggtttaaattccgacaaagagaaaagactaacacaacaaaacaattaactactaatatttgtcattaa |
313 |
Q |
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| T |
42164598 |
ttataagagttaagaagtggaggtccaaggtttaaattccgacaaagagaaaagactaacacaacaaaacaataaactactaatatttgtcattaa |
42164503 |
T |
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