View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9066_high_6 (Length: 348)

Name: NF9066_high_6
Description: NF9066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9066_high_6
NF9066_high_6
[»] chr8 (36 HSPs)
chr8 (156-348)||(18881044-18881236)
chr8 (156-348)||(21391248-21391440)
chr8 (156-348)||(21780574-21780766)
chr8 (156-348)||(21254147-21254338)
chr8 (162-348)||(19981175-19981361)
chr8 (225-348)||(21671786-21671909)
chr8 (184-348)||(22421280-22421444)
chr8 (184-346)||(22523740-22523902)
chr8 (20-140)||(34523723-34523841)
chr8 (158-348)||(22043031-22043221)
chr8 (156-304)||(21163969-21164117)
chr8 (20-140)||(12531735-12531856)
chr8 (156-348)||(22990247-22990439)
chr8 (156-241)||(22117669-22117754)
chr8 (156-241)||(22126453-22126538)
chr8 (73-134)||(35875081-35875142)
chr8 (184-262)||(21982415-21982493)
chr8 (184-262)||(21998901-21998979)
chr8 (158-292)||(22031307-22031441)
chr8 (20-140)||(39697714-39697826)
chr8 (20-138)||(43926094-43926210)
chr8 (156-348)||(19481459-19481651)
chr8 (72-140)||(33452935-33453003)
chr8 (99-138)||(13585476-13585515)
chr8 (188-262)||(22004542-22004616)
chr8 (99-134)||(3445716-3445751)
chr8 (74-138)||(3471776-3471842)
chr8 (56-140)||(5869124-5869206)
chr8 (99-138)||(7858261-7858300)
chr8 (99-138)||(18420456-18420495)
chr8 (59-134)||(42076291-42076366)
chr8 (99-138)||(43967918-43967957)
chr8 (41-78)||(12268413-12268450)
chr8 (56-140)||(32097980-32098065)
chr8 (185-241)||(22245509-22245565)
chr8 (185-241)||(22245927-22245983)
[»] scaffold0122 (1 HSPs)
scaffold0122 (156-348)||(40454-40646)
[»] scaffold0120 (2 HSPs)
scaffold0120 (156-348)||(11429-11620)
scaffold0120 (158-346)||(14251-14439)
[»] chr1 (40 HSPs)
chr1 (156-348)||(22401743-22401935)
chr1 (159-348)||(21752201-21752390)
chr1 (156-348)||(22496272-22496464)
chr1 (162-348)||(20081392-20081578)
chr1 (156-348)||(24784873-24785065)
chr1 (158-348)||(22435749-22435939)
chr1 (20-140)||(12971582-12971701)
chr1 (56-134)||(26486179-26486257)
chr1 (20-134)||(37873525-37873638)
chr1 (156-241)||(19109519-19109604)
chr1 (20-138)||(30004676-30004794)
chr1 (93-140)||(1269728-1269775)
chr1 (56-134)||(5560665-5560743)
chr1 (56-134)||(44836530-44836607)
chr1 (56-134)||(15441470-15441550)
chr1 (156-348)||(16347611-16347803)
chr1 (156-348)||(16379245-16379437)
chr1 (156-348)||(41350684-41350876)
chr1 (20-134)||(42740290-42740400)
chr1 (80-140)||(50371310-50371370)
chr1 (99-138)||(14084547-14084586)
chr1 (73-140)||(27703355-27703422)
chr1 (99-138)||(30899837-30899876)
chr1 (159-241)||(22400474-22400556)
chr1 (20-138)||(185-305)
chr1 (156-241)||(21842363-21842448)
chr1 (82-134)||(9777597-9777649)
chr1 (57-134)||(25930784-25930862)
chr1 (99-135)||(48722214-48722250)
chr1 (99-138)||(10109901-10109940)
chr1 (20-138)||(17487047-17487166)
chr1 (99-138)||(28885519-28885558)
chr1 (20-138)||(50552672-50552793)
chr1 (74-138)||(52055729-52055795)
chr1 (99-138)||(52240384-52240423)
chr1 (156-346)||(21228574-21228764)
chr1 (82-140)||(39080451-39080509)
chr1 (187-232)||(21176610-21176655)
chr1 (20-138)||(51109867-51109988)
chr1 (99-135)||(29207946-29207982)
[»] scaffold1423 (1 HSPs)
scaffold1423 (156-348)||(325-517)
[»] scaffold0540 (1 HSPs)
scaffold0540 (156-348)||(10827-11019)
[»] scaffold0358 (1 HSPs)
scaffold0358 (156-348)||(9112-9304)
[»] chr2 (43 HSPs)
chr2 (162-348)||(23040061-23040247)
chr2 (156-348)||(22733258-22733450)
chr2 (156-348)||(23105211-23105404)
chr2 (152-348)||(23065176-23065372)
chr2 (152-348)||(23074626-23074822)
chr2 (156-348)||(23028945-23029137)
chr2 (156-348)||(22742450-22742642)
chr2 (156-348)||(24678254-24678446)
chr2 (20-140)||(17117414-17117533)
chr2 (158-292)||(11351251-11351385)
chr2 (158-348)||(24657142-24657332)
chr2 (23-140)||(38985480-38985597)
chr2 (156-348)||(24704966-24705158)
chr2 (56-134)||(36059709-36059787)
chr2 (23-140)||(18172714-18172830)
chr2 (20-139)||(15457678-15457797)
chr2 (228-346)||(21320489-21320607)
chr2 (174-344)||(23116547-23116717)
chr2 (20-129)||(13997500-13997608)
chr2 (20-140)||(18915818-18915941)
chr2 (184-241)||(24817431-24817488)
chr2 (57-140)||(1226071-1226155)
chr2 (158-346)||(23205083-23205271)
chr2 (158-346)||(23676687-23676875)
chr2 (158-348)||(22462965-22463155)
chr2 (156-292)||(21139521-21139657)
chr2 (20-140)||(21747000-21747119)
chr2 (99-138)||(7993809-7993848)
chr2 (99-138)||(18676158-18676197)
chr2 (99-138)||(36481572-36481611)
chr2 (20-138)||(4856170-4856288)
chr2 (101-138)||(12269602-12269639)
chr2 (39-127)||(29480424-29480512)
chr2 (39-138)||(45042567-45042667)
chr2 (99-138)||(6530836-6530875)
chr2 (99-138)||(42759604-42759643)
chr2 (99-138)||(45619153-45619192)
chr2 (20-135)||(26151516-26151631)
chr2 (99-140)||(9029771-9029812)
chr2 (159-220)||(21322878-21322939)
chr2 (156-241)||(24874341-24874426)
chr2 (81-140)||(26261450-26261510)
chr2 (99-135)||(42411406-42411442)
[»] scaffold0411 (1 HSPs)
scaffold0411 (156-348)||(8575-8768)
[»] scaffold0084 (1 HSPs)
scaffold0084 (156-345)||(8388-8577)
[»] scaffold0319 (1 HSPs)
scaffold0319 (156-348)||(1197-1389)
[»] scaffold0114 (1 HSPs)
scaffold0114 (156-348)||(17296-17488)
[»] scaffold0423 (1 HSPs)
scaffold0423 (158-340)||(2218-2400)
[»] scaffold0218 (1 HSPs)
scaffold0218 (156-348)||(24659-24851)
[»] chr6 (29 HSPs)
chr6 (156-348)||(18405033-18405225)
chr6 (156-304)||(19867687-19867835)
chr6 (156-348)||(22436869-22437061)
chr6 (156-348)||(23081423-23081615)
chr6 (20-140)||(1690486-1690605)
chr6 (20-140)||(29308236-29308355)
chr6 (184-265)||(30678196-30678277)
chr6 (20-140)||(1092810-1092929)
chr6 (185-256)||(25958934-25959005)
chr6 (158-348)||(27559058-27559248)
chr6 (156-241)||(5836424-5836509)
chr6 (57-140)||(11088747-11088829)
chr6 (20-138)||(22503920-22504039)
chr6 (40-134)||(19231804-19231902)
chr6 (56-134)||(3748371-3748450)
chr6 (159-250)||(25115555-25115646)
chr6 (56-134)||(30915166-30915243)
chr6 (156-241)||(22829582-22829667)
chr6 (156-212)||(16924865-16924921)
chr6 (158-286)||(25756766-25756894)
chr6 (99-138)||(3514698-3514737)
chr6 (197-256)||(18182569-18182628)
chr6 (207-262)||(18325911-18325966)
chr6 (75-140)||(350593-350659)
chr6 (156-238)||(28260396-28260478)
chr6 (156-238)||(28285438-28285520)
chr6 (156-238)||(28339145-28339227)
chr6 (183-236)||(10466049-10466102)
chr6 (201-241)||(18659964-18660004)
[»] scaffold0490 (1 HSPs)
scaffold0490 (156-348)||(56-248)
[»] scaffold0403 (1 HSPs)
scaffold0403 (156-348)||(15076-15268)
[»] chr5 (40 HSPs)
chr5 (156-348)||(25429489-25429680)
chr5 (156-346)||(21882842-21883033)
chr5 (18-140)||(27351525-27351648)
chr5 (156-348)||(23526119-23526311)
chr5 (156-333)||(21332127-21332304)
chr5 (20-140)||(43511794-43511916)
chr5 (20-130)||(5829567-5829677)
chr5 (156-348)||(23461039-23461231)
chr5 (156-348)||(26735854-26736045)
chr5 (58-134)||(29156372-29156447)
chr5 (20-140)||(42291649-42291767)
chr5 (20-134)||(3349498-3349611)
chr5 (20-140)||(17513705-17513824)
chr5 (158-346)||(18782184-18782372)
chr5 (184-256)||(21631617-21631689)
chr5 (24-130)||(7390174-7390279)
chr5 (159-348)||(23474266-23474454)
chr5 (156-241)||(29473306-29473391)
chr5 (156-241)||(37288729-37288814)
chr5 (20-140)||(10591044-10591161)
chr5 (56-134)||(10033733-10033809)
chr5 (74-138)||(12661485-12661551)
chr5 (23-134)||(17326027-17326137)
chr5 (156-241)||(22330120-22330205)
chr5 (160-348)||(20803669-20803857)
chr5 (56-134)||(16515687-16515765)
chr5 (56-134)||(33281856-33281933)
chr5 (57-134)||(18873642-18873719)
chr5 (156-241)||(22350987-22351072)
chr5 (74-138)||(26312165-26312230)
chr5 (20-140)||(931545-931664)
chr5 (20-130)||(20976171-20976277)
chr5 (56-139)||(8379247-8379330)
chr5 (99-138)||(13424042-13424081)
chr5 (99-138)||(26377622-26377661)
chr5 (96-134)||(4177382-4177420)
chr5 (71-134)||(19099132-19099197)
chr5 (20-135)||(37046961-37047078)
chr5 (311-348)||(21631525-21631562)
chr5 (57-140)||(4734386-4734469)
[»] scaffold0040 (2 HSPs)
scaffold0040 (156-348)||(110854-111046)
scaffold0040 (185-348)||(18039-18202)
[»] scaffold0324 (1 HSPs)
scaffold0324 (159-348)||(2157-2346)
[»] scaffold0621 (2 HSPs)
scaffold0621 (162-348)||(188-374)
scaffold0621 (162-348)||(4605-4791)
[»] scaffold0080 (5 HSPs)
scaffold0080 (156-348)||(54802-54994)
scaffold0080 (156-346)||(32044-32234)
scaffold0080 (156-346)||(37510-37700)
scaffold0080 (158-344)||(10190-10375)
scaffold0080 (158-344)||(12845-13030)
[»] scaffold0333 (1 HSPs)
scaffold0333 (159-348)||(18818-19007)
[»] scaffold0278 (1 HSPs)
scaffold0278 (159-344)||(3719-3904)
[»] scaffold0476 (1 HSPs)
scaffold0476 (181-348)||(10976-11142)
[»] scaffold0022 (3 HSPs)
scaffold0022 (156-348)||(41797-41989)
scaffold0022 (156-348)||(75517-75709)
scaffold0022 (156-304)||(34706-34854)
[»] scaffold0243 (1 HSPs)
scaffold0243 (162-348)||(23892-24078)
[»] scaffold0993 (1 HSPs)
scaffold0993 (156-348)||(1147-1339)
[»] scaffold0207 (1 HSPs)
scaffold0207 (201-348)||(4502-4649)
[»] scaffold0611 (1 HSPs)
scaffold0611 (223-348)||(9390-9515)
[»] scaffold0413 (1 HSPs)
scaffold0413 (159-348)||(3710-3899)
[»] scaffold0075 (2 HSPs)
scaffold0075 (159-348)||(55418-55606)
scaffold0075 (186-348)||(47926-48087)
[»] chr4 (27 HSPs)
chr4 (159-348)||(15720-15908)
chr4 (159-344)||(14162609-14162794)
chr4 (186-348)||(8203-8364)
chr4 (156-304)||(15144620-15144768)
chr4 (156-346)||(16219324-16219514)
chr4 (156-346)||(16222644-16222834)
chr4 (20-140)||(34982401-34982520)
chr4 (156-241)||(19635272-19635357)
chr4 (23-140)||(55134385-55134501)
chr4 (158-346)||(13513488-13513676)
chr4 (73-134)||(24449281-24449342)
chr4 (56-140)||(21791354-21791436)
chr4 (71-138)||(23425984-23426053)
chr4 (74-138)||(32130610-32130677)
chr4 (20-138)||(53011892-53012010)
chr4 (99-138)||(27632575-27632614)
chr4 (20-138)||(41038426-41038547)
chr4 (56-134)||(35653784-35653862)
chr4 (156-241)||(14683703-14683788)
chr4 (99-138)||(19661556-19661595)
chr4 (99-138)||(29221469-29221508)
chr4 (75-140)||(26328852-26328918)
chr4 (20-78)||(51066080-51066138)
chr4 (311-348)||(14697392-14697429)
chr4 (156-241)||(40476176-40476261)
chr4 (81-121)||(9925292-9925332)
chr4 (185-241)||(14697266-14697322)
[»] scaffold0081 (2 HSPs)
scaffold0081 (156-348)||(21769-21961)
scaffold0081 (156-348)||(37193-37385)
[»] chr7 (39 HSPs)
chr7 (184-348)||(14042848-14043012)
chr7 (184-348)||(14352878-14353042)
chr7 (156-348)||(15145876-15146068)
chr7 (20-134)||(36438121-36438233)
chr7 (24-140)||(1366185-1366300)
chr7 (36-140)||(25610242-25610343)
chr7 (39-140)||(42312186-42312287)
chr7 (59-140)||(30739301-30739385)
chr7 (56-140)||(28589948-28590033)
chr7 (20-114)||(26282301-26282396)
chr7 (57-140)||(40841049-40841132)
chr7 (156-241)||(11234273-11234358)
chr7 (187-344)||(16726398-16726555)
chr7 (187-344)||(17703412-17703569)
chr7 (160-348)||(11984121-11984309)
chr7 (82-140)||(3799593-3799651)
chr7 (184-262)||(15627677-15627755)
chr7 (73-134)||(26633545-26633606)
chr7 (57-134)||(32956949-32957026)
chr7 (158-346)||(9591491-9591679)
chr7 (20-139)||(29730858-29730974)
chr7 (20-139)||(29741973-29742089)
chr7 (74-138)||(7636144-7636210)
chr7 (99-138)||(12251135-12251174)
chr7 (156-239)||(12690626-12690709)
chr7 (57-140)||(40001517-40001599)
chr7 (57-140)||(773686-773771)
chr7 (103-138)||(4100135-4100170)
chr7 (99-138)||(18015428-18015467)
chr7 (20-138)||(33910241-33910360)
chr7 (80-134)||(41908359-41908414)
chr7 (99-138)||(42160970-42161009)
chr7 (81-140)||(44002762-44002821)
chr7 (184-262)||(15114355-15114433)
chr7 (38-128)||(41852089-41852177)
chr7 (156-241)||(11550162-11550247)
chr7 (183-236)||(12459781-12459834)
chr7 (71-138)||(33418933-33419003)
chr7 (99-135)||(46221550-46221586)
[»] scaffold0023 (2 HSPs)
scaffold0023 (184-348)||(43400-43564)
scaffold0023 (156-348)||(30521-30713)
[»] scaffold0447 (1 HSPs)
scaffold0447 (156-346)||(1813-2003)
[»] scaffold0383 (1 HSPs)
scaffold0383 (156-346)||(4677-4867)
[»] scaffold0273 (1 HSPs)
scaffold0273 (156-348)||(205-397)
[»] scaffold0357 (1 HSPs)
scaffold0357 (197-348)||(17924-18075)
[»] scaffold0501 (1 HSPs)
scaffold0501 (156-348)||(89-281)
[»] scaffold0198 (1 HSPs)
scaffold0198 (156-348)||(30452-30644)
[»] scaffold0011 (1 HSPs)
scaffold0011 (156-348)||(23480-23672)
[»] scaffold0297 (1 HSPs)
scaffold0297 (156-292)||(7660-7796)
[»] scaffold0293 (1 HSPs)
scaffold0293 (156-348)||(15575-15767)
[»] scaffold0012 (1 HSPs)
scaffold0012 (156-348)||(216367-216559)
[»] scaffold0042 (3 HSPs)
scaffold0042 (156-346)||(36769-36959)
scaffold0042 (179-241)||(26540-26602)
scaffold0042 (315-348)||(26676-26709)
[»] chr3 (39 HSPs)
chr3 (274-348)||(17497564-17497638)
chr3 (156-348)||(15065826-15066018)
chr3 (156-348)||(19727515-19727707)
chr3 (225-348)||(14578604-14578727)
chr3 (156-348)||(23079200-23079392)
chr3 (20-140)||(48626798-48626917)
chr3 (185-348)||(12843286-12843449)
chr3 (156-348)||(15262385-15262577)
chr3 (20-134)||(7767248-7767361)
chr3 (187-346)||(12501719-12501878)
chr3 (56-134)||(46904924-46905002)
chr3 (156-348)||(3688698-3688890)
chr3 (158-346)||(23414975-23415163)
chr3 (20-140)||(43905622-43905741)
chr3 (169-348)||(11861121-11861300)
chr3 (41-139)||(15998459-15998552)
chr3 (20-135)||(25598851-25598966)
chr3 (156-241)||(15713346-15713431)
chr3 (57-134)||(21596516-21596592)
chr3 (156-241)||(24185945-24186030)
chr3 (20-138)||(28132503-28132623)
chr3 (20-138)||(27110639-27110759)
chr3 (22-140)||(1649612-1649729)
chr3 (156-214)||(14873885-14873943)
chr3 (156-238)||(16638528-16638610)
chr3 (158-348)||(16804130-16804320)
chr3 (201-262)||(12508822-12508883)
chr3 (156-241)||(15358838-15358923)
chr3 (56-134)||(27303367-27303447)
chr3 (184-236)||(2247138-2247190)
chr3 (73-140)||(19965698-19965766)
chr3 (99-138)||(51939403-51939442)
chr3 (99-138)||(52654970-52655009)
chr3 (20-138)||(13401637-13401753)
chr3 (258-348)||(14873768-14873858)
chr3 (20-138)||(6715616-6715734)
chr3 (156-241)||(15399808-15399892)
chr3 (184-256)||(13028620-13028692)
chr3 (99-135)||(29387601-29387637)
[»] scaffold0064 (1 HSPs)
scaffold0064 (156-348)||(69369-69560)
[»] scaffold0575 (2 HSPs)
scaffold0575 (239-348)||(9867-9976)
scaffold0575 (156-245)||(7822-7911)
[»] scaffold0550 (1 HSPs)
scaffold0550 (156-348)||(10105-10297)
[»] scaffold0342 (1 HSPs)
scaffold0342 (156-332)||(14228-14405)
[»] scaffold0006 (1 HSPs)
scaffold0006 (184-348)||(104420-104583)
[»] scaffold0010 (2 HSPs)
scaffold0010 (185-348)||(5109-5272)
scaffold0010 (158-346)||(14591-14779)
[»] scaffold0074 (1 HSPs)
scaffold0074 (185-347)||(6307-6469)
[»] scaffold0034 (1 HSPs)
scaffold0034 (39-140)||(99092-99194)
[»] scaffold0017 (2 HSPs)
scaffold0017 (159-304)||(194829-194974)
scaffold0017 (161-292)||(17069-17200)
[»] scaffold0819 (1 HSPs)
scaffold0819 (168-292)||(291-415)
[»] scaffold0008 (2 HSPs)
scaffold0008 (156-348)||(15-207)
scaffold0008 (275-348)||(139557-139630)
[»] scaffold0001 (2 HSPs)
scaffold0001 (156-259)||(441817-441920)
scaffold0001 (156-348)||(496185-496377)
[»] scaffold0130 (1 HSPs)
scaffold0130 (158-344)||(7730-7916)
[»] scaffold0270 (2 HSPs)
scaffold0270 (156-348)||(7038-7230)
scaffold0270 (156-348)||(14168-14360)
[»] scaffold0102 (1 HSPs)
scaffold0102 (159-348)||(50292-50481)
[»] scaffold0412 (1 HSPs)
scaffold0412 (156-348)||(15526-15718)
[»] scaffold0079 (1 HSPs)
scaffold0079 (156-348)||(36663-36855)
[»] scaffold0305 (1 HSPs)
scaffold0305 (158-348)||(3031-3221)
[»] scaffold0077 (1 HSPs)
scaffold0077 (156-346)||(57563-57753)
[»] scaffold0018 (2 HSPs)
scaffold0018 (156-241)||(23352-23437)
scaffold0018 (184-241)||(9405-9462)
[»] scaffold0003 (1 HSPs)
scaffold0003 (151-292)||(424468-424609)
[»] scaffold0546 (1 HSPs)
scaffold0546 (158-344)||(46-232)
[»] scaffold0109 (2 HSPs)
scaffold0109 (158-344)||(13075-13261)
scaffold0109 (156-241)||(41320-41405)
[»] scaffold0789 (1 HSPs)
scaffold0789 (156-241)||(103-188)
[»] scaffold0529 (1 HSPs)
scaffold0529 (184-344)||(5281-5441)
[»] scaffold0177 (2 HSPs)
scaffold0177 (187-348)||(11303-11464)
scaffold0177 (187-348)||(14988-15149)
[»] scaffold0028 (4 HSPs)
scaffold0028 (156-241)||(11634-11719)
scaffold0028 (184-232)||(128601-128649)
scaffold0028 (187-241)||(21193-21247)
scaffold0028 (156-244)||(55169-55257)
[»] scaffold0181 (2 HSPs)
scaffold0181 (158-346)||(28877-29065)
scaffold0181 (20-138)||(16902-17020)
[»] scaffold0100 (2 HSPs)
scaffold0100 (185-265)||(16639-16719)
scaffold0100 (315-348)||(16556-16589)
[»] scaffold0035 (1 HSPs)
scaffold0035 (74-138)||(22626-22692)
[»] scaffold0410 (1 HSPs)
scaffold0410 (158-348)||(308-498)
[»] scaffold0019 (1 HSPs)
scaffold0019 (158-348)||(171285-171475)
[»] scaffold0282 (1 HSPs)
scaffold0282 (185-348)||(13421-13589)
[»] scaffold0161 (1 HSPs)
scaffold0161 (184-235)||(36024-36075)
[»] scaffold0679 (1 HSPs)
scaffold0679 (184-262)||(1056-1134)
[»] scaffold0451 (1 HSPs)
scaffold0451 (158-292)||(14035-14169)
[»] scaffold0009 (1 HSPs)
scaffold0009 (187-348)||(229799-229960)
[»] scaffold0007 (1 HSPs)
scaffold0007 (168-292)||(48842-48966)
[»] scaffold0564 (1 HSPs)
scaffold0564 (99-138)||(1239-1278)
[»] scaffold0230 (1 HSPs)
scaffold0230 (207-262)||(18389-18444)
[»] scaffold0098 (1 HSPs)
scaffold0098 (184-262)||(25665-25743)
[»] scaffold0431 (1 HSPs)
scaffold0431 (168-241)||(10545-10618)
[»] scaffold0331 (1 HSPs)
scaffold0331 (208-256)||(15018-15066)
[»] scaffold0165 (1 HSPs)
scaffold0165 (183-235)||(12152-12204)


Alignment Details
Target: chr8 (Bit Score: 153; Significance: 5e-81; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 18881236 - 18881044
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| |||||||| || || || ||||||||||||||||    
T  18881236 aaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattacaattgaagcatactatatcatcat 18881137  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  18881136 gtttgcactcagctagtgcatgacccttctttccacagtgaaaacatctcttggtatccccaggacaagcattactcttgtggcctttctcac 18881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 21391440 - 21391248
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| || ||||| |||| |||| |||||||||||| |||||||| ||||||||||||||| |||||||| || || || ||||||||||||||||    
T  21391440 aaagcaaagaccctaccagtagtcggcgccttcttaggcttcttgcactatgaaccaatgtgaccctcttcattacaattgaagcatactatatcatcat 21391341  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||||    
T  21391340 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctcttgacgtccccaggacaagcattactcttgtggcctttctcac 21391248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 21780766 - 21780574
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| || ||||| |||| |||| |||||||||||| |||||||| ||||||||||||||| |||||||| || || || ||||||||||||||||    
T  21780766 aaagcaaagaccctaccagtagtcggcgccttcttaggcttcttgcactatgaaccaatgtgaccctcttcattacaattgaagcatactatatcatcat 21780667  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||||    
T  21780666 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctcttgacgtccccaggacaagcattactcttgtggcctttctcac 21780574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 21254147 - 21254338
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||| ||||| ||||||||| |||||||||||| |||||||| |||||| |||||||| | ||||||||||||||| || || ||||||||||    
T  21254147 aaagcaaaaacactaccagtagccggcgccttcttaggcttcttgcactatgaaccgatgtgaccctattcattgcagttaaagcaaacaatatcatcat 21254246  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||| ||||||||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||| |||||||    
T  21254247 gtttgcactcagctagtgcataacccttcttcccacatcg-aaacatctcttggtatccccaggacaaggattactcttatggcccttctcac 21254338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 162 - 348
Target Start/End: Original strand, 19981175 - 19981361
Alignment:
Q  162 aaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgc 261  Q
    ||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||||| |||||||| || || || || || || |||| ||||||||    
T  19981175 aaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcattacaattgaagcacacaatgtcattatgtttgc 19981274  T
Q  262 actcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||| ||||| || |||||||| ||    || |  ||||||||||| |||||||||||||||||||    
T  19981275 actcagctagtgcatgacccttcttaccacatcggaaacatcttttcacctctctcggacaagcattgctcttgtggcctttctcac 19981361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 225 - 348
Target Start/End: Original strand, 21671786 - 21671909
Alignment:
Q  225 tcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaag 324  Q
    |||||||| ||||| || || |||||||||| ||||||||||||||||||||||||||| || |||||||||||||| || ||   ||||||||||||||    
T  21671786 tcattgcaattaaagcacacaatatcatcatctttgcactcagctagtgcatgaccctttttaccacagcgaaaacacctcttcacatccccaggacaag 21671885  T
Q  325 cattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||    
T  21671886 cattactcttgtggcctttctcac 21671909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 348
Target Start/End: Complemental strand, 22421444 - 22421280
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgaccctt 283  Q
    |||||||||||| |||||| || || ||||| || ||||| |||||||| ||||| || || |||||||||||||| |||||||| |||| ||| |||||    
T  22421444 ccttcttaggcttcttgcattgcgacccaatatgtccttcctcattgcaattaaagcacacaatatcatcatgtttacactcagcaagtgtatgtccctt 22421345  T
Q  284 ctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||| ||||| ||||| || |  ||   ||||||||||||||||||||| ||||||||||||||||    
T  22421344 cttgccacaacgaaagcaccgtttcacatccccaggacaagcattacttttgtggcctttctcac 22421280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 184 - 346
Target Start/End: Original strand, 22523740 - 22523902
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgaccctt 283  Q
    |||||||||||| |||||| || ||||||||||||||||| |||||||| || || || || ||||||||||| || |||||||| |||||||| || ||    
T  22523740 ccttcttaggcttcttgcattgcgaaccaatgtgaccttcctcattgcaattgaagcacacaatatcatcatgcttacactcagcaagtgcatgcccttt 22523839  T
Q  284 ctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||| ||||| || ||||| |  ||   ||| |||||||||||||||||| |||||||||||||    
T  22523840 cttaccacaacggaaacaccgtttcacatctccaggacaagcattactcctgtggcctttctc 22523902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 34523723 - 34523841
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || ||||||||||||| ||| |  ||||||||||| |||||||||| |||||| |||| ||||||| ||||||||||||||| |||     
T  34523723 taggaggctcggctctctatttaaaataggcccccaataaaataaaaacgcaatttttt-tgtgtagctaagctttatt-aaaaatcagaatcagaagag 34523820  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  34523821 cttctaaacatgaaacgaaat 34523841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 22043031 - 22043221
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||||||||||||||| || |||||||| ||||| |||||||| ||||| || || || ||||||| | |     
T  22043031 agcaaaaactcgacctgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattacagttgaagcacacaatatcattacgc 22043130  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| |||||||    |||||||||||| ||||| |||| |||| | ||| | ||  | |||||| ||||||||||||||||||||||||    
T  22043131 ttgcaatcagctacaatatgacccttcttgccacaccgaacacatttcttgatctcttctggacaaacattactcttgtggcctttctcac 22043221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 304
Target Start/End: Complemental strand, 21164117 - 21163969
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| ||||  ||| |||||||||| |||||||| || |||||||||||||| ||||||||||| || || || || || |||| |     
T  21164117 aaagcgaaaactctaccagtagttggcgccttcttaggttgcttgcattgagaaccaatgtgaccctcttcattgcaattgaagcacacaatgtcattac 21164018  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatct 304  Q
      ||||| ||||| ||||||||||||||||| ||||| || ||||||||    
T  21164017 agttgcaatcagccagtgcatgacccttcttaccacatcggaaacatct 21163969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 12531856 - 12531735
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaatttttt-gtgtgtaactaaactttattaaaaaatcagaatcagtaga 118  Q
    ||||||||| || || ||||||||||||| | | |  |||||||||||  ||||||||| ||||||| |||| |||||||||||||||||||| || |||    
T  12531856 taggaggcttggctctctatttaaaataggctcccaataaaataaaaacacaatttttttgtgtgtagctaagctttattaaaaaatcagaataagaaga 12531757  T
Q  119 acttctaaacatgaaaggaaat 140  Q
     ||||||||||||||| |||||    
T  12531756 gcttctaaacatgaaacgaaat 12531735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 22990247 - 22990439
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | || |||||||||||| |||||| ||||| ||||| ||  |||| |||||||| || ||||| |  | ||||||||    
T  22990247 aaagcaaaaactctcccagtagtctgcgccttcttaggcttcttgcattgtgacccaatatgttcttcctcattgcaattgaaacagataacatcatcat 22990346  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || |||||||| |||| ||  || ||||| ||||| ||||| || || ||   ||| |||||||||||||||| ||||||||| |||||||    
T  22990347 gcttacactcagcaagtgtattccctttcttaccacaacgaaagcaccttttcacatctccaggacaagcattacccttgtggccgttctcac 22990439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 22117754 - 22117669
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  22117754 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 22117669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 22126538 - 22126453
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | |||||||||| |||||||| |||| ||||||||||||||||    
T  22126538 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgactttctccattgcagttaaaaca 22126453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 35875142 - 35875081
Alignment:
Q  73 ttttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||| ||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||    
T  35875142 ttttttttgtgtaactaagcttcattaaaaaatcagaatcagaagaacttttaaacatgaaa 35875081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 21982493 - 21982415
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    |||||||||||| ||||||||| |||| ||| ||||||||||| ||||||||| | || |||| ||||||||| |||||    
T  21982493 ccttcttaggcttcttgcactgcgaactaatatgaccttcttccttgcagttatagcaaactacatcatcatgattgca 21982415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 21998979 - 21998901
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    |||||||||||| ||||||||| |||| ||| ||||||||||| ||||||||| | || |||| ||||||||| |||||    
T  21998979 ccttcttaggcttcttgcactgcgaactaatatgaccttcttccttgcagttatagcaaactacatcatcatgattgca 21998901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 292
Target Start/End: Original strand, 22031307 - 22031441
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||||||||||||||| || |||||||| |||||||||||||| || || || || || ||||||| | |     
T  22031307 agcaaaaactcgacctgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccttcttcattacaattgaagcacacaatatcattacgc 22031406  T
Q  258 ttgcactcagctagtgcatgacccttctttccaca 292  Q
    ||||| |||||||    |||||||||||| |||||    
T  22031407 ttgcaatcagctacaatatgacccttcttgccaca 22031441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 39697714 - 39697826
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    ||||||||| || || ||||||||||||| ||| |   || |||||||||||||||||| |||||| |||     |||||||||||||||||||| |||     
T  39697714 taggaggcttgggtctctatttaaaataggccccc---aatataaaaatgcaattttttttgtgtagcta-----tattaaaaaatcagaatcagaagag 39697805  T
Q  120 cttctaaacatgaaaggaaat 140  Q
     |||||||||||||| |||||    
T  39697806 tttctaaacatgaaacgaaat 39697826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 43926094 - 43926210
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    ||||| |||||| || || |||||||||| || |  |||||||||||  | |||||||| |||||| ||||| || | ||||||||||||||||| ||||    
T  43926094 taggaagctcggctctctttttaaaataggcctttagtaaaataaaac-gtaatttttt-tgtgtagctaaatttcactaaaaaatcagaatcagaagaa 43926191  T
Q  120 cttctaaacatgaaaggaa 138  Q
     ||||||||||||||||||    
T  43926192 gttctaaacatgaaaggaa 43926210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 19481651 - 19481459
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | ||||| |||| ||||||||||||| |||| || ||||| || || || ||  ||     
T  19481651 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgagaactaatgtgaccttctccattacaattaaagcacacaatgtctgcac 19481552  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |||||||   ||||||||||||| ||||| || | |||  | ||| | ||| ||| ||| || || |||||||||||||||||||    
T  19481551 gattgcaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcac 19481459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 33453003 - 33452935
Alignment:
Q  72 attttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||| | |||| |||||||| |||||||||||| ||| || ||||||||||||||||||| |||||    
T  33453003 attttttttttgtagctaaacttcattaaaaaatcataattagaagaacttctaaacatgaaacgaaat 33452935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 13585515 - 13585476
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  13585515 aaaaaatcagaatcagaagaacttctaaacatgaaaggaa 13585476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 262
Target Start/End: Complemental strand, 22004616 - 22004542
Alignment:
Q  188 cttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    |||||||| ||||||||| |||| ||| ||||||||||  ||||||||| | || |||||||||||||| |||||    
T  22004616 cttaggcttcttgcactgcgaactaatatgaccttcttgcttgcagttatagcaaactatatcatcatgattgca 22004542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 3445751 - 3445716
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||||||| |||||||||||||||||||    
T  3445751 aaaaaatcagaatcagaagaacttctaaacatgaaa 3445716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 3471842 - 3471776
Alignment:
Q  74 tttttgtgtgtaactaaactttattaaaaaa--tcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||| |||||| |||||||| |||||||||  |||||||||  ||||||||||||||| |||||||    
T  3471842 tttttttgtgtagctaaacttcattaaaaaaaatcagaatcataagaacttctaaacattaaaggaa 3471776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 5869124 - 5869206
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttatt-aaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||||||||  || |||||| |||||| |||||||| ||| |||||||||||||    ||||||||||||||||||| |||||    
T  5869124 gtaaaataaaaacacatttttttttgtgtagctaaacttcattaaaaaaatcagaat---aagaacttctaaacatgaaatgaaat 5869206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 7858300 - 7858261
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  7858300 aaaaaatcagaatcagaagaagttctaaacatgaaaggaa 7858261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 18420456 - 18420495
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  18420456 aaaaaatcagaatcagaataacttctaaacatgaaaggaa 18420495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 42076366 - 42076291
Alignment:
Q  59 aaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||| |||| |||||| ||| ||||||  ||| ||| ||||||||||||||||||  ||||||| |||||||||||    
T  42076366 aaatcaaaacgcaattctttttgtgtagataagcttcattaaaaaatcagaatcaaaagaacttttaaacatgaaa 42076291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 43967918 - 43967957
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  43967918 aaaaaatcagaatcagaagaacttctaaatatgaaaggaa 43967957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 12268413 - 12268450
Alignment:
Q  41 taaaatagaccctcggtaaaataaaaatgcaatttttt 78  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  12268413 taaaatagaccctcagtaaattaaaaatgcaatttttt 12268450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 32097980 - 32098065
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgt-gtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||||||||| | |||||||| | | |||||||| | | |||||||||||  ||||||  |||||||||||||||||| |||||    
T  32097980 gtaaaataaaaacgtaatttttttttttgtaactaagcatcattaaaaaatcgaaatcagatgaacttctaaacatgaaacgaaat 32098065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 22245565 - 22245509
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||| | |||||| ||||| ||||| ||||||||||||||||| || |||||    
T  22245565 cttcttaggtttcttgcattgtgacccaatatgaccttcttcattgcaattgaaaca 22245509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 22245983 - 22245927
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||| | |||||| ||||| ||||| ||||||||||||||||| || |||||    
T  22245983 cttcttaggtttcttgcattgtgacccaatatgaccttcttcattgcaattgaaaca 22245927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 40646 - 40454
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  40646 aaagcaaaaactctaccagtagccgacaccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgcaattaaaacatactatatcatcat 40547  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||   |||||||||||||||||| |||||||||||||||||||    
T  40546 gtttgcactcagctagtgcatgacccttctttccacagcaaaaacatctcttaacatccccaggacaagcattgctcttgtggcctttctcac 40454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 149; Significance: 1e-78; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 11429 - 11620
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  11429 aaagcaaaaactctaccagtagccggcaccttcttaggcttcttgcactgggaaccaatgtgccct-cttcattgcaattaaaacatactatatcatcat 11527  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||    
T  11528 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctcttgacatccccaagacaagcattactcttgtggcctttctcac 11620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 158 - 346
Target Start/End: Original strand, 14251 - 14439
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||     
T  14251 agcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgcaattaaaacatactatatcaacatgc 14350  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    || ||||||||||||| |||||||||||||||||||||||||||||| ||   ||||||| |||||||||||||||| |||||||||||    
T  14351 ttacactcagctagtgtatgacccttctttccacagcgaaaacatctcttaacatccccaagacaagcattactcttatggcctttctc 14439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 22401743 - 22401935
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||||| |||||||| || || || ||||||||||||||||    
T  22401743 aaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgcgaaccaatgtgaccctcttcattacaattgaagcatactatatcatcat 22401842  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22401843 gtttgcactcagctagtgcatgatccttctttccacagcgaaaacatctcttggtatccccaggacaagcattactcttgtggcctttctcac 22401935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 21752201 - 21752390
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    |||||||||||||| |||| | ||||||||||||||| ||||||||||||||||||||||||||| || ||||| || ||||| || |||||||||||||    
T  21752201 gcaaaaactctaccagtagtctgcaccttcttaggcttcttgcactgtgaaccaatgtgaccttcctcgttgcaattgaaacacacaatatcatcatgtt 21752300  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||   |||||||| ||||||||| ||||| |||||||||||||    
T  21752301 tgcactcagctagtgcatgacccttcttaccacagcgaaaacacctcttaacatccccagtacaagcattgctcttttggcctttctcac 21752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 22496464 - 22496272
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| |||| |||||||||||||||| ||||| |||| ||||||||| ||||||||||| || || || || ||||||| ||    
T  22496464 aaagcgaaaactctaccagtagtcggcgccttcttaggctgcttacactgcgaactaatgtgaccctcttcattgcaattgaagcacacaatatcattat 22496365  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||    || || ||||||||||  |||||||||||||||||||    
T  22496364 gtttgcactcagctagtgcgtgacccttcttaccacatcgaaaacatctctttacctctcccggacaagcatcgctcttgtggcctttctcac 22496272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 162 - 348
Target Start/End: Complemental strand, 20081578 - 20081392
Alignment:
Q  162 aaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgc 261  Q
    ||||||||||| |||| |||| ||||||||||| || | ||||| |||||||||||||||||||||||||| || || || || || |||| | | || |    
T  20081578 aaaactctaccagtagtcggcgccttcttaggccgcgtacactgcgaaccaatgtgaccttcttcattgcaattgaagcacacaatgtcattacgcttac 20081479  T
Q  262 actcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||| ||||| |||||||||||||||||||||||||||||| ||    || || ||||||||||| |||||||||||||||||||    
T  20081478 actcagatagtgtatgacccttctttccacagcgaaaacatctctttacctctcccggacaagcattgctcttgtggcctttctcac 20081392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 24785065 - 24784873
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||| ||||| |||| |||| |||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||| || ||||||| |     
T  24785065 aaagcaaaaaccctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcattgcaattgaaacacacaatatcattac 24784966  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |||||||  | |||||||||||| ||||| ||   |||| | ||  | ||| | |||||| |||| |||||||||||||||||||    
T  24784965 gcttgcagtcagctaccgtatgacccttcttgccacaccgggcacatttctttatctcctctggacaaacattgctcttgtggcctttctcac 24784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 22435939 - 22435749
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||| ||||| |||| |||| || ||||||| ||||||||||| |||||||||||||| ||||| ||||| || || || || ||||||  |||     
T  22435939 agcaaaaaccctaccagtagtcggcgccctcttaggttgcttgcactgagaaccaatgtgaccctcttccttgcaattgaagcacacaatatcactatgc 22435840  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| ||||||| || |||||||||||| ||||| || |||||| | ||    ||| | |||||| |||| |||||||||||||||||||    
T  22435839 ttgcaatcagctaatgtatgacccttcttgccacatcggaaacatttctttacctcctctggacaaacattgctcttgtggcctttctcac 22435749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 12971701 - 12971582
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || |||||||||||| ||||    ||||||||||| |||||||||| ||| || |||||||||||||||||||||||||||||  |     
T  12971701 taggaggctcggctctctatttaaaataaacccctaataaaataaaaacgcaatttttt-tgtatagctaaactttattaaaaaatcagaatcagtttag 12971603  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||| ||||||||| |||||    
T  12971602 cttcttaacatgaaacgaaat 12971582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 26486179 - 26486257
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||||||| ||||||||||||| |||| ||| ||| ||||||||||||||| ||||||| |||||||||||    
T  26486179 gtaaaataaaaatgcatttttttgtgtgtagctaagcttcatttaaaaatcagaatcagaagaacttttaaacatgaaa 26486257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 37873525 - 37873638
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    ||||||||||| |||  | |||||||||| ||| | |||||||||||||| |||||||||||||||  ||| ||| |||||||||| |||||||  ||||    
T  37873525 taggaggctcgattctatttttaaaataggccc-cagtaaaataaaaatgtaattttttgtgtgtagttaagcttcattaaaaaattagaatcataagaa 37873623  T
Q  120 cttctaaacatgaaa 134  Q
    ||| |||||||||||    
T  37873624 cttttaaacatgaaa 37873638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 19109519 - 19109604
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||||| ||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||||||||||||||||||||    
T  19109519 aaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctcttcattgcagttaaaaca 19109604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 30004676 - 30004794
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaa--aaatcagaatcagtag 117  Q
    |||||||||||| || || |||||||||| |||   |||||||||||  | |||||||| |||||| |||||||| ||| ||  ||||||||||||| ||    
T  30004676 taggaggctcggctctctttttaaaataggcccatagtaaaataaaac-gtaatttttt-tgtgtagctaaacttcattgaattaaatcagaatcagaag 30004773  T
Q  118 aacttctaaacatgaaaggaa 138  Q
    |||||||||||||||||||||    
T  30004774 aacttctaaacatgaaaggaa 30004794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 1269775 - 1269728
Alignment:
Q  93 tttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  1269775 tttattaaaaaatcagaatcaatagaacttctaaacatgaaacgaaat 1269728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 5560743 - 5560665
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||| |||||||||| | |||  |||||||| ||||||| ||| ||||||  |||||||||||||||||||    
T  5560743 gtaaaataaaaacgcaattttttttttgtggctaaacttcattaaaagatctgaatcaaaagaacttctaaacatgaaa 5560665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 44836530 - 44836607
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||| |||||||||| |||||| ||||  ||||||||||||| |||||||  ||||||| |||||||||||    
T  44836530 gtaaaataaaaacgcaattttttctgtgtagctaag-tttattaaaaaattagaatcataagaacttttaaacatgaaa 44836607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 15441550 - 15441470
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaact--aaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||| |||||||||| ||||||  |  || ||| |||||||||||| |||||| |||||||||||||||||||    
T  15441550 gtaaaataaaaacgcaattttttttgtgtatatttaagcttcattaaaaaatcaaaatcagaagaacttctaaacatgaaa 15441470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 16347803 - 16347611
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| || ||||| |||| |||| || ||||||||||  | ||||| |||| ||||||||||||| ||||||||||||| || || || ||  ||     
T  16347803 aaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgagaactaatgtgaccttctccattgcagttaaagcacacaatgtctgcac 16347704  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || || |||||||   ||||||||||||| ||||| || | |||  | ||| | ||| ||| ||| || || |||||||||||||||||||    
T  16347703 gattacaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcac 16347611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 16379245 - 16379437
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| |||||||| |||| | |  ||||||| |||| ||| || || ||| |||||||||| ||||||||||| || ||||| || ||||||||||    
T  16379245 aaagcaaacactctaccagtagtctgagccttctttggcttcttacattgcgaaacaatgtgaccctcttcattgcaattgaaacacacaatatcatcat 16379344  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || ||||| |  || | ||| || ||||| ||||| || ||||| |  ||   ||| |||| |||| ||||||| ||||||||||||||||    
T  16379345 gcttacactctggaagcgtatgtcctttcttaccacaacggaaacaccatttcacatctccagtacaaacattacttttgtggcctttctcac 16379437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 41350876 - 41350684
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | ||||| |||| ||||||||||||| |||| || ||||| || || || ||  ||     
T  41350876 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgagaactaatgtgaccttctccattacaattaaagcacacaatgtctgcac 41350777  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |||||||   ||||||||||||| ||||| || | |||  | ||| | ||| ||| ||| || || |||||||||||||||||||    
T  41350776 gattgcaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcac 41350684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 42740400 - 42740290
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||||||  | |||||||||| ||| | |||||||||||| | |||||||| |||||   ||||||| ||||||||||||||   || ||||    
T  42740400 taggaggctcggttctatttttaaaataggccc-cagtaaaataaaaacgtaattttttttgtgtggttaaacttcattaaaaaatcaga---agaagaa 42740305  T
Q  120 cttctaaacatgaaa 134  Q
    ||| |||||||||||    
T  42740304 cttttaaacatgaaa 42740290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 50371370 - 50371310
Alignment:
Q  80 tgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||| |||| ||| ||||||||||||||||||  ||||||||||||||||||| |||||    
T  50371370 tgtgtagctaagcttcattaaaaaatcagaatcataagaacttctaaacatgaaacgaaat 50371310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 14084547 - 14084586
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  14084547 aaaaaatcagaatcagaagaacttctaaacatgaaaggaa 14084586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 27703355 - 27703422
Alignment:
Q  73 ttttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||||||||||  ||| |||| |||||||||||||||||  | ||||||||||||||||| |||||    
T  27703355 ttttttgtgtgtagttaagctttgttaaaaaatcagaatcataataacttctaaacatgaaacgaaat 27703422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 30899876 - 30899837
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  30899876 aaaaaatcagaatcagaagaacttctaaacatgaaaggaa 30899837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 22400474 - 22400556
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||| || ||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  22400474 gcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 22400556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 305 - 185
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaa----tcagaatcagt 115  Q
    ||||||||||||||| || |||||||||| | | | |||||||||||  | |||||||| |||||| |||||||| |||||||||    ||| |||||      
T  305 taggaggctcggttctctttttaaaataggctcccagtaaaataaaac-gtaatttttt-tgtgtagctaaacttcattaaaaaaaaaatcaaaatcaaa 208  T
Q  116 agaacttctaaacatgaaaggaa 138  Q
    |||||||| ||||||||||||||    
T  207 agaacttccaaacatgaaaggaa 185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 21842363 - 21842448
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| |||| || ||||||||||  | |||| ||||| ||||||||| ||| ||||||||||||||||    
T  21842363 aaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatgtgaccctctccattgcagttaaaaca 21842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Complemental strand, 9777649 - 9777597
Alignment:
Q  82 tgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||| |||||||| |||||||||||||||| || | |||||||||||||||||    
T  9777649 tgtagctaaacttcattaaaaaatcagaattagaataacttctaaacatgaaa 9777597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 25930862 - 25930784
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaa--tcagaatcagtagaacttctaaacatgaaa 134  Q
    ||||||||||| | |||||||| |||||| |||||||| |||||||||  |||||||||| ||| |||||||| ||||||    
T  25930862 taaaataaaaacgtaatttttt-tgtgtagctaaacttcattaaaaaaaatcagaatcagaagagcttctaaatatgaaa 25930784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 48722214 - 48722250
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaag 135  Q
    |||||||||||||||| ||||||||||||||||||||    
T  48722214 aaaaaatcagaatcagaagaacttctaaacatgaaag 48722250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 10109940 - 10109901
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||| |||||||||| |||||||||||||||||||||||    
T  10109940 aaaaactcagaatcagaagaacttctaaacatgaaaggaa 10109901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 17487047 - 17487166
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaa---tcagaatcagta 116  Q
    |||||||||||  || || |||||||||| ||||  |||||||||||  | |||||||| |||||| ||||| || ||| |||||   |||||||||| |    
T  17487047 taggaggctcgactctctttttaaaataggcccttagtaaaataaaac-gtaatttttt-tgtgtagctaaatttcattgaaaaaaactcagaatcagaa 17487144  T
Q  117 gaacttctaaacatgaaaggaa 138  Q
    ||| ||||||||||||||||||    
T  17487145 gaagttctaaacatgaaaggaa 17487166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 28885519 - 28885558
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  28885519 aaaaaatcagaattagaagaacttctaaacatgaaaggaa 28885558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 50552793 - 50552672
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttatt-----aaaaaatcagaatcag 114  Q
    |||||||||| | || || ||||||||| |||||  ||||||||||| |  |||||||| |||||| ||||| || |||     |||||||||||||||     
T  50552793 taggaggctcagctctctttttaaaataaacccttagtaaaataaaact-taatttttt-tgtgtagctaaatttcattaaaaaaaaaaatcagaatcaa 50552696  T
Q  115 tagaacttctaaacatgaaaggaa 138  Q
     |||||||||||||||||||||||    
T  50552695 aagaacttctaaacatgaaaggaa 50552672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 52055795 - 52055729
Alignment:
Q  74 tttttgtgtgtaactaaactttattaaaaaa--tcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||| |||||| |||||||| |||||||||  |||||||||| | ||||||||| |||||||||||    
T  52055795 tttttttgtgtagctaaacttcattaaaaaaaatcagaatcagaaaaacttctaagcatgaaaggaa 52055729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 52240384 - 52240423
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  52240384 aaaaaatcagaatcagaagaacttctaaatatgaaaggaa 52240423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 21228764 - 21228574
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||| ||| || |  ||| || |||||||||||||||| || |||||||| ||||| |||||||| || || || || || |||||||       
T  21228764 aaagcaaaaactcgacccgttgtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattacaattgaagcacacaatatcatttc 21228665  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    | ||||| |||||||     ||||||||||| ||||| |  | |||| | ||| | ||  || ||||| ||||||||||||||||||||||    
T  21228664 gcttgcaatcagctacaatttgacccttcttgccacacctgacacatttcttgatctctacaagacaaacattactcttgtggcctttctc 21228574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 39080451 - 39080509
Alignment:
Q  82 tgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||| |||| ||| ||| ||||||||||||||  ||||||||||||||||||| |||||    
T  39080451 tgtagctaagcttcattgaaaaatcagaatcataagaacttctaaacatgaaatgaaat 39080509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 21176610 - 21176655
Alignment:
Q  187 tcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgca 232  Q
    |||||||||||||||| || |||||||| ||||| |||||||||||    
T  21176610 tcttaggctgcttgcattgggaaccaatatgaccctcttcattgca 21176655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 51109867 - 51109988
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaa----aatcagaatcagt 115  Q
    |||||||||||| || || |||||||||| |||   |||||||||||  | |||||||| | |||| ||||| || |||||||    ||||||||| ||     
T  51109867 taggaggctcggctctctttttaaaataggcccctagtaaaataaaac-gtaattttttttttgtagctaaatttcattaaaaaaaaaatcagaattaga 51109965  T
Q  116 agaacttctaaacatgaaaggaa 138  Q
    |||| ||||||||||||||||||    
T  51109966 agaatttctaaacatgaaaggaa 51109988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 29207946 - 29207982
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaag 135  Q
    |||||||||||||||| |||||||||||| |||||||    
T  29207946 aaaaaatcagaatcagaagaacttctaaatatgaaag 29207982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 517 - 325
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||| | || |||||||||||  ||||||||||||||||||||||||||||||||||    
T  517 aaagcaaaaactctaccagtagccggtaccttcttaggcttcttgcattatgcaccaatgtgacgctcttcattgcagttaaaacatactatatcatcat 418  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||||||||||||    
T  417 gtttgcactcagctagtgcatgacccttctttccacagcggaaacatctcttggcatcccaaggacaagcattactcttgtggcctttctcac 325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 11019 - 10827
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||    
T  11019 aaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgtagttaaagcatacaatatcatcat 10920  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  10919 gtttgcactcagctagtgcatgacccttcttcccacatcggaaacatctgttggtatccctaggacaagcattactcttgtggcccttctcac 10827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 141; Significance: 7e-74; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 9112 - 9304
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| | ||| ||||||||||    
T  9112 aaagcaaaaactctaccagtagccggcgccttcttaggctgcttacactgtgaaccaatgtgaccctcttcattgcagttaaagcgtacaatatcatcat 9211  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||| ||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9212 gtttgcactcaactagtgcatgacccttcttcccacatcggaaacatctcttggtatccccaggacaagcattactcttgtggcccttctcac 9304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 1e-72; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 162 - 348
Target Start/End: Complemental strand, 23040247 - 23040061
Alignment:
Q  162 aaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgc 261  Q
    |||| |||||| || || ||| |||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  23040247 aaaaatctaccagttgctggcgccttcttaggcttcttgcactgtgaaccaatgtgacgctcttcattgcagttaaaacatactatatcatcatgtttgc 23040148  T
Q  262 actcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  23040147 actcagctagtgcatgacccttctttccacatcggaaacatctcttggtatccccaggacaagcattactcttgtggcccttctcac 23040061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 22733450 - 22733258
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||| |||||||||||| |||| ||||||||||||||| | |||||||||||||||||||||||| |||||||| || || || |||||| |||||||||    
T  22733450 aaagtaaaaactctaccagtagtcggcaccttcttaggtttcttgcactgtgaaccaatgtgaccctcttcattacaattgaagcatactttatcatcat 22733351  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22733350 gtttgcactcagctagtgcatgacccttctttccacattgtaaacatctcttggtatccccaggacaagcattactcttgtggcctttctcac 22733258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 23105404 - 23105211
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgacct-tcttcattgcagttaaaacatactatatcatca 254  Q
    ||||||||||||||||| |||| |||| |||||||||||||||| ||||||||||||||||||||| ||||||||||| || || || || |||||||||    
T  23105404 aaagcaaaaactctaccagtagtcggcgccttcttaggctgcttacactgtgaaccaatgtgacctctcttcattgcaattgaagcacacaatatcatca 23105305  T
Q  255 tgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||   |||||||||||||||||||||||| |||||||    
T  23105304 tgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctcttgacgtcttaaggacaagcattactcttgtggcccttctcac 23105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 152 - 348
Target Start/End: Original strand, 23065176 - 23065372
Alignment:
Q  152 agtgaaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatca 251  Q
    |||||||| ||||||||| || |||| |||| ||||||||||||  ||||||||||||||||||||||| |||||||| || || || ||||||||||||    
T  23065176 agtgaaagaaaaaactctgccagtagtcggcgccttcttaggctttttgcactgtgaaccaatgtgaccctcttcattacaattgaagcatactatatca 23065275  T
Q  252 tcatgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||  |||||||||||||| ||  ||||||||||| |||||||    
T  23065276 tcatgtttgcattcagccagtgcatgacccttctttccacagcgaaaacatcttttgacatccccaggacaagaatagctcttgtggcccttctcac 23065372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 152 - 348
Target Start/End: Original strand, 23074626 - 23074822
Alignment:
Q  152 agtgaaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatca 251  Q
    |||||||| ||||||||| || |||| |||| ||||||||||||  ||||||||||||||||||||||| |||||||| || || || ||||||||||||    
T  23074626 agtgaaagaaaaaactctgccagtagtcggcgccttcttaggctttttgcactgtgaaccaatgtgaccctcttcattacaattgaagcatactatatca 23074725  T
Q  252 tcatgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||  |||||||||||||| ||  ||||||||||| |||||||    
T  23074726 tcatgtttgcattcagccagtgcatgacccttctttccacagcgaaaacatcttttgacatccccaggacaagaatagctcttgtggcccttctcac 23074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 23029137 - 23028945
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| |||| |||||||||| ||||||||||| |||||||||||||| ||||||||||| || || || || ||||||| ||    
T  23029137 aaagcgaaaactctaccagtagtcggcgccttcttaggttgcttgcactgagaaccaatgtgaccctcttcattgcaattgaagcacacaatatcattat 23029038  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||| ||||||||||||||||||||||| ||||| || |||||||| ||    || |||||||||||||| |||||||||||||||||||    
T  23029037 gtttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttacctctccaggacaagcattgctcttgtggcctttctcac 23028945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 22742642 - 22742450
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| |||||| |||| |||| |||| |||||||||||||||| ||||| |||||||||||||| ||||||||||| || || || || || |||| ||    
T  22742642 aaagcgaaaactttaccagtagtcggcgccttcttaggctgcttacactgcgaaccaatgtgaccctcttcattgcaattgaagcacacaatgtcattat 22742543  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||| || || || |||||||| ||    || || ||||||||||| |||||||||| ||||||||    
T  22742542 gtttgcactcagctagtgcatgacccttcttaccgcatcggaaacatctatttacctctcccggacaagcattgctcttgtggcatttctcac 22742450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 24678254 - 24678446
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| |||| |||||||||||||||||||||| ||||| |||||||  |||||| |||| || || || || || |||| |     
T  24678254 aaagcgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaacctatgtgactctcttcaatgcaattgaagcacacaatgtcattac 24678353  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||||||||||||||||||||||||||| ||||| || |||||||| ||    || || ||||||||||| |||||||||||||||||||    
T  24678354 gcttgcactcagctagtgcatgacccttcttaccacaacggaaacatctcttaacctctcccggacaagcattgctcttgtggcctttctcac 24678446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 17117414 - 17117533
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || ||||||||||||| ||| |  |||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| |||     
T  17117414 taggaggctcggctctctatttaaaataggcccccaataaaataaaaatgcaatttttt-tgtgtagctaagctttattaaaaaatcagaatcagaagag 17117512  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  17117513 cttctaaacatgaaacgaaat 17117533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 292
Target Start/End: Complemental strand, 11351385 - 11351251
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||| ||||| |||| ||||||| |||||||||||||| |||| |||||||||||||| ||||| ||||| || || || || ||||||  |||     
T  11351385 agcaaaaaccctaccagtagtcggcaccctcttaggctgcttggactgagaaccaatgtgaccctcttccttgcaattgaagcacacaatatcactatgc 11351286  T
Q  258 ttgcactcagctagtgcatgacccttctttccaca 292  Q
    ||||| ||||||| || |||||||||||| |||||    
T  11351285 ttgcaatcagctaatgtatgacccttcttgccaca 11351251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 24657332 - 24657142
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||||||||||||||| || |||||||| ||||| || || ||||  |||||||| || |||||| |||||    
T  24657332 agcaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcctctttgccattaaaacacacgatatcaccatgt 24657233  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| ||||||| ||  ||||||||||| ||||| || |||||  | ||    ||| |||||||| || |||||||||||||||||||||    
T  24657232 ttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcac 24657142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 38985480 - 38985597
Alignment:
Q  23 gaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaactt 122  Q
    ||||||||| || ||||||||||||| ||| |  ||||||||||| | |||||||||||||||  ||| ||||||||||||||||||||||| |||  ||    
T  38985480 gaggctcggctctctatttaaaataggcccccaataaaataaaaacgtaattttttgtgtgtagttaagctttattaaaaaatcagaatcagaagagttt 38985579  T
Q  123 ctaaacatgaaaggaaat 140  Q
    ||||| |||||| |||||    
T  38985580 ctaaaaatgaaacgaaat 38985597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 24705158 - 24704966
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||| ||||  |||| |||| |||||||||||||||||||||| ||||| |||||||| |||||||| || || || || || || |||| |     
T  24705158 aaagcaaaaaccctactagtagtcggcgccttcttaggctgcttgcactgagaacctatgtgaccctcttcattacaattgaagcacacaatgtcattac 24705059  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |||||||  |  ||||||||||| |||||  | |||||| | ||    ||| |||||||| |||| |||||||||||||||||||    
T  24705058 gcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcac 24704966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 36059709 - 36059787
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||| |||||||||| | |||| |||||||| |||||||||||||| |||  |||||||||||||||||||    
T  36059709 gtaaaataaaaacgcaattttttttttgtagctaaacttcattaaaaaatcagattcacaagaacttctaaacatgaaa 36059787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 140
Target Start/End: Original strand, 18172714 - 18172830
Alignment:
Q  23 gaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaactt 122  Q
    |||| |||| || |||||||||||||  || |  ||||||||||| |||||||||| |||||| | || ||||||||||||||||||||||| |||  ||    
T  18172714 gaggttcggctctctatttaaaataggtccccaataaaataaaaacgcaatttttt-tgtgtagccaagctttattaaaaaatcagaatcagaagagttt 18172812  T
Q  123 ctaaacatgaaaggaaat 140  Q
    |||||||||||| |||||    
T  18172813 ctaaacatgaaacgaaat 18172830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 15457797 - 15457678
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || |||||||||||||  | ||  |||||||||||  ||||| ||| |||||| |||| |||||||||||||||| ||| || |||     
T  15457797 taggaggctcggctctctatttaaaataggtcttcaataaaataaaaacacaattctttttgtgtagctaagctttattaaaaaatcaaaataagaagag 15457698  T
Q  120 cttctaaacatgaaaggaaa 139  Q
    ||||| ||||||||| ||||    
T  15457697 cttctgaacatgaaacgaaa 15457678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 346
Target Start/End: Complemental strand, 21320607 - 21320489
Alignment:
Q  228 ttgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcat 327  Q
    ||||| ||||| || || ||||||| | |||| ||||||||||||| ||| || ||||| ||||||||||||||||| ||    || || ||||||||||    
T  21320607 ttgcaattaaagcacacaatatcattacgtttacactcagctagtgtatgtcctttcttcccacagcgaaaacatctttttacctctcccggacaagcat 21320508  T
Q  328 tactcttgtggcctttctc 346  Q
    | |||||||||||||||||    
T  21320507 tgctcttgtggcctttctc 21320489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 344
Target Start/End: Complemental strand, 23116717 - 23116547
Alignment:
Q  174 gtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtg 273  Q
    |||| |||| || ||||||||||  | |||||||||| ||||||||| |||||||||||||||||||| || || || | ||| ||||| |||||||       
T  23116717 gtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctcttcattgcagttaaaacacacaatgtccttatgcttgcaatcagctacga 23116618  T
Q  274 catgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
     ||||||| |||| | ||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||    
T  23116617 tatgacccctcttgctacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttc 23116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 129
Target Start/End: Complemental strand, 13997608 - 13997500
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||||||  | |||||||||| ||  | ||||||| |||| |||||| ||| |||||| |||| ||| ||||||||||||||||||| ||||    
T  13997608 taggaggctcggttctatttttaaaataggcca-cagtaaaatcaaaacgcaattctttttgtgtagctaagcttcattaaaaaatcagaatcagaagaa 13997510  T
Q  120 cttctaaaca 129  Q
    ||| ||||||    
T  13997509 cttttaaaca 13997500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 18915818 - 18915941
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgt---gtgtaactaaactttattaaaaaatcagaatcagta 116  Q
    |||||||||||| || |||||||||||||  || |  |||||||||||||||||||||| |   ||| |  ||| |||||||||||||  |||||||| |    
T  18915818 taggaggctcggctctctatttaaaatagggccccaataaaataaaaatgcaatttttttttttgtgcagttaagctttattaaaaaaatagaatcagaa 18915917  T
Q  117 gaacttctaaacatgaaaggaaat 140  Q
    || ||||||||||||||| |||||    
T  18915918 gagcttctaaacatgaaacgaaat 18915941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 24817488 - 24817431
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||||    
T  24817488 ccttcttaggcttcttgcattgtgaaccaatatgaccttcctcattgcagttaaaaca 24817431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 1226071 - 1226155
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttattaaaa-aatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||||||||   |||||||| |||||| |||||||| ||||||| ||||||||| || ||||||||||||||||||| |||||    
T  1226071 taaaataaaaacataattttttttgtgtagctaaacttcattaaaaaaatcagaattagaagaacttctaaacatgaaacgaaat 1226155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 346
Target Start/End: Original strand, 23205083 - 23205271
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||||||||||||||| || |||||||||||||| |||||||| || || || || || |||||||         
T  23205083 agcaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatgtgaccctcttcattacaattgaagcacacaatatcatttctc 23205182  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||| |||||||    |||||||||||| |||||  | | |||| | ||| | ||  |||||||| ||||||||||||||||||||||    
T  23205183 ttgcaatcagctacaatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctc 23205271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 346
Target Start/End: Original strand, 23676687 - 23676875
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||||||||||||||| || |||||||||||||| |||||||| || || || || || |||||||         
T  23676687 agcaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatgtgaccctcttcattacaattgaagcacacaatatcatttctc 23676786  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||| |||||||    |||||||||||| |||||  | | |||| | ||| | ||  |||||||| ||||||||||||||||||||||    
T  23676787 ttgcaatcagctacaatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctc 23676875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 22463155 - 22462965
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| |||  |||  ||| || |||| ||||||||||| || |||||||| ||||| ||||| ||||| || || || || ||||||| | |     
T  22463155 agcaaaaactcgacccatagtaggcgccctcttcggctgcttgcattgggaaccaatatgaccctcttcgttgcaattgaagcacacaatatcattacgc 22463056  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| |||||||    |||||||||||| |||||  | | |||| | ||| | ||  |||||||| ||||||||||||||||||||||||    
T  22463055 ttgcaatcagctacgatatgacccttcttgccacactggacacatttcttgatctcttcaggacaaacattactcttgtggcctttctcac 22462965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 21139657 - 21139521
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| || ||||| |||| |||| || | ||||||||  | |||||||||| ||||||||| ||| |||||||||||||||| || || || |||     
T  21139657 aaagcaaagaccctaccagtagtcggcgccctattaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaacacacaatgtcttcac 21139558  T
Q  256 gtttgcactcagctagtgcatgacccttctttccaca 292  Q
    | ||||| |||||||    |||||||||||| |||||    
T  21139557 gcttgcaatcagctacaatatgacccttcttgccaca 21139521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 21747000 - 21747119
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || |||||||||||||  |  |  |||||||||||  ||||||||| ||||||| ||| |||||||||||||  |||||||  |||     
T  21747000 taggaggctcggctctctatttaaaataggtctccaataaaataaaaacacaatttttt-tgtgtaattaagctttattaaaaaaatagaatcaaaagag 21747098  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||| ||||||||||| |||||    
T  21747099 cttttaaacatgaaacgaaat 21747119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 7993848 - 7993809
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  7993848 aaaaaatcagaatcagaagaacttctaaacatgaaaggaa 7993809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 18676158 - 18676197
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  18676158 aaaaaatcagaatcagaagaacttctaaacatgaaaggaa 18676197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 36481611 - 36481572
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  36481611 aaaaaatcagaatcagaagaacttctaaacatgaaaggaa 36481572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 4856288 - 4856170
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaa--tcagaatcagtag 117  Q
    |||||||||||  || || |||||||||| |||   |||||||||||  | |||||||| |||||| ||||| || |||||||||  |||||||||| ||    
T  4856288 taggaggctcgactctctttttaaaataggcccctagtaaaataaaac-gtaatttttt-tgtgtagctaaatttcattaaaaaaaatcagaatcagaag 4856191  T
Q  118 aacttctaaacatgaaaggaa 138  Q
    || ||||||||||||||||||    
T  4856190 aagttctaaacatgaaaggaa 4856170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 138
Target Start/End: Complemental strand, 12269639 - 12269602
Alignment:
Q  101 aaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12269639 aaaatcagaatcagaagaacttctaaacatgaaaggaa 12269602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 29480424 - 29480512
Alignment:
Q  39 tttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttatt-aaaaaatcagaatcagtagaacttctaaa 127  Q
    |||||||||| ||| || |||||| ||||||||||| ||| |||||| |||| ||| ||| |||||||||||||||| ||||||| ||||    
T  29480424 tttaaaataggcccccg-taaaatcaaaatgcaattctttttgtgtacctaatcttcattaaaaaaatcagaatcagaagaacttttaaa 29480512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 138
Target Start/End: Complemental strand, 45042667 - 45042567
Alignment:
Q  39 tttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaa---tcagaatcagtagaacttctaaacatgaaag 135  Q
    ||||||||||||||   |||||||||||  | |||||||| |||||| |||||||| |||||||||   |||||||| | |||||||||||| |||||||    
T  45042667 tttaaaatagacccatagtaaaataaaac-gtaatttttt-tgtgtagctaaacttcattaaaaaaaaatcagaatcggaagaacttctaaatatgaaag 45042570  T
Q  136 gaa 138  Q
    |||    
T  45042569 gaa 45042567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 6530875 - 6530836
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  6530875 aaaaaatcagaatcaaaagaacttctaaacatgaaaggaa 6530836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 42759604 - 42759643
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  42759604 aaaaaatcagaatcagaagaagttctaaacatgaaaggaa 42759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 45619192 - 45619153
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  45619192 aaaaaatcagaatcagaagaagttctaaacatgaaaggaa 45619153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 26151516 - 26151631
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaa--aatcagaatcagtag 117  Q
    ||||||||| || || || |||||||||| |||   |||||||||||  | |||||||| |||||| ||||| || |||||||  |||||||||||| ||    
T  26151516 taggaggcttggctctctttttaaaataggcccctagtaaaataaaac-gtaatttttt-tgtgtagctaaatttcattaaaaaaaatcagaatcagaag 26151613  T
Q  118 aacttctaaacatgaaag 135  Q
    || |||||||||||||||    
T  26151614 aagttctaaacatgaaag 26151631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 9029812 - 9029771
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||||| ||||| |||||||||||||||||||| |||||    
T  9029812 aaaaaatcataatcaatagaacttctaaacatgaaacgaaat 9029771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 220
Target Start/End: Complemental strand, 21322939 - 21322878
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgacc 220  Q
    |||||||||||||| ||||  ||| |||||||||| ||| | || |||||||||||||||||    
T  21322939 gcaaaaactctaccagtagttggcgccttcttaggttgcgtacattgtgaaccaatgtgacc 21322878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 24874426 - 24874341
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| | || || ||||||||||  | |||||||||| ||| ||||| ||| ||||||||||||||||    
T  24874426 aaagcaaagaccctaccagtagtcagcgccctcttaggctgagtacactgtgaactaatttgaccctctccattgcagttaaaaca 24874341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 26261510 - 26261450
Alignment:
Q  81 gtgtaactaaactttattaaaaaa-tcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||||||| ||| ||||||||| ||| |||||  ||||||||||||||||||| |||||    
T  26261510 gtgtaactaagcttcattaaaaaaatcataatcataagaacttctaaacatgaaacgaaat 26261450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 42411406 - 42411442
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaag 135  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  42411406 aaaaaatcagaatcagaagaacttttaaacatgaaag 42411442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 8575 - 8768
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctg-cttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatca 254  Q
    |||||||| |||||||| |||| |||| ||||||||||||  |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  8575 aaagcaaacactctaccagtagtcggcgccttcttaggctttcttgcactgtgaaccaatgtgaccctcttcattgcagttaaagcatacaatatcatca 8674  T
Q  255 tgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||    
T  8675 tgtttgcactcagctagagcatgacccttctttccacagcgaaaacatctcttggtatccctaggacaagcattactcttgtggcccttctcac 8768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 156 - 345
Target Start/End: Original strand, 8388 - 8577
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  8388 aaagcaaaaactctaccagtagccggcgccttcttaggcttcttccactgtgaaccaatgtgaccttcttcatcgcaattaaagcatactatatcatcat 8487  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttct 345  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||   ||||| |||||||||||||||||||||||||||||    
T  8488 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacacctcttaacatccctaggacaagcattactcttgtggcctttct 8577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 1197 - 1389
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||||||  ||| |||| |||||||||||| | |||||  ||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  1197 aaagcaaaaactctaccattagtcggcgccttcttaggcttcatgcacaatgaaccaatgtgaccctcttcattgcagttaaaacattctatatcatcat 1296  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||    
T  1297 gtttacactcagctagtgcatgacccttctttccacagcgaaaacatctcttggtatccccaggataagcattactcttgtgacctttctcac 1389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 17488 - 17296
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| |||||||| |||| |||| ||| |||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  17488 aaagcaaacactctaccagtagtcggcgcctgcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgcagttaaagcatacaatatcatcat 17389  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  17388 gtttgcactcagctagtgcatgacccttcttcccacatcggaaacatctcttggtatccccaggacaagcattactcttgtggcccttctcac 17296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 158 - 340
Target Start/End: Complemental strand, 2400 - 2218
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||||||| |||||||||||||||||||||| ||| |||| ||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||    
T  2400 agcaaaaactctaccagtagccggcaccttcttaggctacttacactatgaaccaatgtgaccctcttcattgtagttaaagcatacaatatcatcatgt 2301  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcc 340  Q
    ||||||||||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||||||    
T  2300 ttgcactcagctagtgcatgacccttcttcccacatcggaaacatctcttggtatccccaggacaagcattactcttgtggcc 2218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 24851 - 24659
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||  |||| |||| |||||||||||| |||||||||||||||||||||||  || |||||||||||||| ||||||||||||||||    
T  24851 aaagcaaaaactctacaagtagtcggcgccttcttaggcttcttgcactgtgaaccaatgtgacgctcctcattgcagttaaagcatactatatcatcat 24752  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||| |||||| |||||||| |||||||    
T  24751 gtttgcactcagctagtgcatgacctttctttccacaacggaaacatctcttggtatccccaggacaagaattacttttgtggcccttctcac 24659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 18405225 - 18405033
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| || | |||||||||||| ||||||||| |||||||||||||||||||||||||| || || ||||||||||| ||||    
T  18405225 aaagcaaaaactctaccagtagtcgacgccttcttaggcttcttgcactgagaaccaatgtgaccttcttcattgcaattgaagcatactatatcctcat 18405126  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || ||   ||||||||||||||||||||||||||||||||||||||    
T  18405125 gtttgcactcagctagtgcatgacccttcttaccacagcgaaaacacctcttaacatccccaggacaagcattactcttgtggcctttctcac 18405033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 156 - 304
Target Start/End: Original strand, 19867687 - 19867835
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||  |||| |||| |||||||||||||||| ||||| |||||||||||||| ||||||||||| || || || || ||||||| ||    
T  19867687 aaagcgaaaactctactagtagtcggcgccttcttaggctgcttacactgcgaaccaatgtgaccctcttcattgcaattgaagcacacaatatcattat 19867786  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatct 304  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19867787 gtttgcactcagctagtgcatgacccttcttaccacagcgaaaacatct 19867835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 22436869 - 22437061
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||||| |||||||| || || || || || || |||| |     
T  22436869 aaagcgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccatcttcattacaattgaagcacacaatgtcattac 22436968  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||| ||||| || |||||||| ||    || || ||||||||||| |||||||||||||||||||    
T  22436969 gtttgcactcagctagtgcatgacccttcttaccacatcggaaacatctctttacctcacccggacaagcattgctcttgtggcctttctcac 22437061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 23081423 - 23081615
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | || |||||||||||| |||| |||| ||||||||||||||||  |||||||| || ||||| || ||||||||||    
T  23081423 aaagcaaaaactctcccagtagtctgcgccttcttaggcttcttgtactgcgaaccaatgtgacctttctcattgcaattgaaacacacaatatcatcat 23081522  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||| || ||| | |||| ||| || ||||||||||| ||||||||||| ||    |||||||||||||||||||||||||||||||||||||    
T  23081523 gtttacaatcaacaagtgtatgccctttctttccacaacgaaaacatcttttcacgtccccaggacaagcattactcttgtggcctttctcac 23081615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 1690486 - 1690605
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || ||||||||||||| ||  |  |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| | |     
T  1690486 taggaggctcggctctctatttaaaataggcctccaataaaataaaaatgcaatttttt-tgtgtagctaaactttataaaaaaatcagaatcagaaaag 1690584  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  1690585 cttctaaacatgaaacgaaat 1690605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 29308236 - 29308355
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || ||||||||||||| ||| |  ||||||||||| |||||||||| ||||||  ||| ||||||||||||||||||||||  |||     
T  29308236 taggaggctcggctctctatttaaaataggcccccaataaaataaaaacgcaatttttt-tgtgtagttaagctttattaaaaaatcagaatcataagag 29308334  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  29308335 cttctaaacatgaaacgaaat 29308355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 30678277 - 30678196
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactc 265  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||||| |  ||||||||||| ||||||||    
T  30678277 ccttcttaggcttcttgcactgcgaaccaatgtgaccttcttcattacagttgaaacacatcatatcatcatgcttgcactc 30678196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 1092810 - 1092929
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    ||||||||||||||| ||||||||||||| ||     ||||||||||| |||||||||| | |||| |||| |||||||||||||| |||||||  |||     
T  1092810 taggaggctcggttctctatttaaaataggcctctaataaaataaaaacgcaatttttt-tatgtagctaagctttattaaaaaattagaatcaaaagag 1092908  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  1092909 cttctaaacatgaaacgaaat 1092929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 25959005 - 25958934
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatg 256  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||| |||||    
T  25959005 cttcttaggcttcttgcactgcgaaccaatgtgtccttcttcattgcagttgaaacacactatatcttcatg 25958934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 27559248 - 27559058
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||||||||||||||| || |||||||| ||||| || || ||||| ||||| || || || ||| ||||     
T  27559248 agcaaaaactcaacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcctctttgcaattaaagcacacgatgtcagcatgc 27559149  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| ||||||| ||  ||||||||||| ||||| || |||||  | ||    ||| |||||||| || |||||||||||||||||||||    
T  27559148 ttgcagtcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcac 27559058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 5836509 - 5836424
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||||||||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||||| ||||||||||||||    
T  5836509 aaagcaaaaactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctcttcgttgcagttaaaaca 5836424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 11088829 - 11088747
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||||||||  || ||||| |||||| |||||||| |||||||||||||||| || ||||||||||||||||||| |||||    
T  11088829 taaaataaaaatataaattttt-tgtgtagctaaacttcattaaaaaatcagaattagaagaacttctaaacatgaaacgaaat 11088747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 22504039 - 22503920
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttatt---aaaaaatcagaatcagta 116  Q
    ||||||||||||||| || |||||||||||||||| ||||||| |||| | |||||||| |||||| ||||| || |||   |||||| ||||||||| |    
T  22504039 taggaggctcggttctctttttaaaatagaccctcagtaaaat-aaaacgtaatttttt-tgtgtagctaaatttcattaaaaaaaaaacagaatcagaa 22503942  T
Q  117 gaacttctaaacatgaaaggaa 138  Q
    ||| |||||||||| |||||||    
T  22503941 gaagttctaaacataaaaggaa 22503920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 19231902 - 19231804
Alignment:
Q  40 ttaaaatagaccctcggtaaaataaaaatgcaa-ttttttgtgtgtaactaaactttattaaaaaatcagaatc---agtagaacttctaaacatgaaa 134  Q
    |||||||||| || | ||||||||||||| ||| |||||| ||| ||||||| ||| |||||||||| ||||||   || |||||||||||||||||||    
T  19231902 ttaaaatagatccccagtaaaataaaaatacaatttttttttgtataactaagcttcattaaaaaataagaatcagaagaagaacttctaaacatgaaa 19231804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 3748371 - 3748450
Alignment:
Q  56 gtaaaataaaaatgcaatttt-ttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||||||| |||| ||||||||| |||| ||| |||||||| ||| |||||| ||||||| |||| ||||||    
T  3748371 gtaaaataaaaatgcattttttttgtgtgtagctaagcttcattaaaaagtcaaaatcagaagaacttttaaatatgaaa 3748450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 25115555 - 25115646
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatc 250  Q
    ||||| || ||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||| |||||||||||||||| || |||||    
T  25115555 gcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaacacacaatatc 25115646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 30915166 - 30915243
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||||| | |||||| | ||||  ||| ||| ||||||||||||||||||| ||||||| |||||||||||    
T  30915166 gtaaaataaaaatgta-ttttttatttgtagttaagcttcattaaaaaatcagaatcagaagaacttataaacatgaaa 30915243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 22829667 - 22829582
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| |||| || ||||||||||  | ||| |||||| ||||||||| ||| ||||||||||||||||    
T  22829667 aaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacacggtgaactaatgtgaccctctccattgcagttaaaaca 22829582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 16924921 - 16924865
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaacca 212  Q
    ||||||||||||||||| |||| |||| |||||||||||||  | ||||||||||||    
T  16924921 aaagcaaaaactctaccagtagtcggcgccttcttaggctgagtacactgtgaacca 16924865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 286
Target Start/End: Complemental strand, 25756894 - 25756766
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||||||||| ||||| || |||||||| ||||| || |||||||| || || || || ||||||| | |     
T  25756894 agcaaaaactcgacccgtagtaggcgccctcttaggctgtttgcattgggaaccaatatgaccctcctcattgcaattgaagcacacaatatcattacgc 25756795  T
Q  258 ttgcactcagctagtgcatgacccttctt 286  Q
    ||||| ||||||| |  ||||||||||||    
T  25756794 ttgcaatcagctactatatgacccttctt 25756766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 3514698 - 3514737
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  3514698 aaaaaatcagaatcagaagaacttttaaacatgaaaggaa 3514737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 18182628 - 18182569
Alignment:
Q  197 cttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatg 256  Q
    |||||| ||||| ||||| ||||| ||||||||||||||||| ||||| | |||||||||    
T  18182628 cttgcattgtgacccaatatgaccctcttcattgcagttaaagcatacaacatcatcatg 18182569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 18325911 - 18325966
Alignment:
Q  207 gaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    ||||||||||||||||||||||| ||||| ||||| || | ||||||||| |||||    
T  18325911 gaaccaatgtgaccttcttcattacagttgaaacacaccacatcatcatgcttgca 18325966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Complemental strand, 350659 - 350593
Alignment:
Q  75 ttttgtgtgtaactaaactttattaaaaaatcagaatcagta-gaacttctaaacatgaaaggaaat 140  Q
    |||| |||||| |||||||| |||||||||| ||||| || | |||||||||||||||||| |||||    
T  350659 ttttttgtgtagctaaacttcattaaaaaattagaattagaaagaacttctaaacatgaaacgaaat 350593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 28260478 - 28260396
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaa 238  Q
    ||||||||||| ||||| |||| |||| || |||| |||||  | ||||| |||| ||||||||| ||| |||||||||||||    
T  28260478 aaagcaaaaaccctaccagtagtcggcgccctcttcggctgagtacactgagaactaatgtgaccctctccattgcagttaaa 28260396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 28285438 - 28285520
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaa 238  Q
    ||||||||||| ||||| |||| |||| || |||| |||||  | ||||| |||| ||||||||| ||| |||||||||||||    
T  28285438 aaagcaaaaaccctaccagtagtcggcgccctcttcggctgagtacactgagaactaatgtgaccctctccattgcagttaaa 28285520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 238
Target Start/End: Complemental strand, 28339227 - 28339145
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaa 238  Q
    ||||||||||| ||||| |||| |||| || |||| |||||  | ||||| |||| ||||||||| ||| |||||||||||||    
T  28339227 aaagcaaaaaccctaccagtagtcggcgccctcttcggctgagtacactgagaactaatgtgaccctctccattgcagttaaa 28339145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 10466102 - 10466049
Alignment:
Q  183 accttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagtta 236  Q
    |||||||| |||||  | |||||||||| ||| |||||||||||||||||||||    
T  10466102 accttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagtta 10466049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 18659964 - 18660004
Alignment:
Q  201 cactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||| ||||||||||||||||||||||| ||||| |||||    
T  18659964 cactgagaaccaatgtgaccttcttcattacagttgaaaca 18660004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 56 - 248
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| ||| |||| |||| ||||  ||||||||||| ||||||||| |||||||||||||| |||||||| || || || ||||||||||||||||    
T  56 aaagcaaatactataccagtagtcggcgtcttcttaggcttcttgcactgggaaccaatgtgaccatcttcattacaattgaagcatactatatcatcat 155  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||| |||||||    
T  156 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctcttgacatccccaggacaagcattactcttgtggcccttctcac 248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 15076 - 15268
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| |||||||| ||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||| |||||    
T  15076 aaagcaaagactctaccagtagccgacgccttcttaggcttcttgcactgtgaaccaatgtgaccctcttcattgcagttaaagcatacaatattatcat 15175  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||| ||||||||| ||||| || |||||||| |||||||||| |||||||||||||| ||||||||| |||||||    
T  15176 gtttgcactcagctagtgcataacccttcttcccacatcggaaacatctattggtatccctaggacaagcattacccttgtggcccttctcac 15268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 25429489 - 25429680
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||| ||||||||||||||||| |||||||| || || || ||||||||||||||||    
T  25429489 aaagcaaaaactctaccagtagccggcgccttcttaggcttcttgcattgtgaaccaatgtgaccctcttcattacaattgaagcatactatatcatcat 25429588  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||   || ||||||||||||||| |||||||||||||||||||    
T  25429589 gtttgccctcagctagtgcatgacccttctttccacagcgaaaacatctatttacat-cccaggacaagcattgctcttgtggcctttctcac 25429680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 21882842 - 21883033
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||| ||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| || || || || || || |||| ||    
T  21882842 aaagccaaaaccctaccagtagtcggcaccttcttaggctgcttacactgagaaccaatgtgaccttcttcattacaattgaagcacacaatgtcattat 21882941  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagc-gaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||  ||||||||| ||||||||||||||| ||||| | |||||||||| ||    || || ||||||||||| |||||||||||||||||    
T  21882942 gtttctactcagctattgcatgacccttcttaccacatctgaaaacatctctttacctctcccggacaagcattgctcttgtggcctttctc 21883033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 27351648 - 27351525
Alignment:
Q  18 attaggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgt-gtgtaactaaactttattaaaaaatcagaatcagta 116  Q
    |||| ||||||||||| |||||||||||||| |||| ||||||||||||||| |||||||| | ||||| |||||||| ||||||||||  ||||||| |    
T  27351648 attatgaggctcggtttcctatttaaaataggcccttggtaaaataaaaatgtaatttttttttgtgtagctaaacttcattaaaaaattcgaatcagaa 27351549  T
Q  117 gaacttctaaacatgaaaggaaat 140  Q
    ||||||||||||||||||||||||    
T  27351548 gaacttctaaacatgaaaggaaat 27351525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 23526119 - 23526311
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| |||| |||||||||||||||||||||| |||||||| ||||| ||||||||||| || || || || ||||||| |     
T  23526119 aaagcgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatatgaccctcttcattgcaattgaagcacacaatatcattac 23526218  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |  |||| ||||||||||||||| ||||| |  |||||||| ||    || | |||||||||||| |||||||||||||||||||    
T  23526219 ggttgcaattggctaatgcatgacccttcttaccacatctgaaacatctttttacctctctaggacaagcattgctcttgtggcctttctcac 23526311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 156 - 333
Target Start/End: Complemental strand, 21332304 - 21332127
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | ||||||||||||||| |||||| || ||||||||||||||||  |||||||| || ||||| || | ||||||||    
T  21332304 aaagcaaaaactctcccagtagtctgcaccttcttaggcttcttgcattgcgaaccaatgtgacctttctcattgcaattgaaacacacaacatcatcat 21332205  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactct 333  Q
    |||| |||||||| |||| |||||| ||||| || || ||||| || |  ||   |||||||||||||||| ||||||    
T  21332204 gtttacactcagcaagtgtatgaccattcttacctcaacgaaagcaccgctttacatccccaggacaagcagtactct 21332127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 43511916 - 43511794
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgt--gtgtaactaaactttattaaaaaatcagaatcagtag 117  Q
    |||||||||||| || ||||||||||||| ||| |  ||||||||||| |||||||||| |  ||||| |||| ||||||||||||||||||||||| ||    
T  43511916 taggaggctcggctctctatttaaaataggcccccaataaaataaaaacgcaattttttttttgtgtagctaagctttattaaaaaatcagaatcagcag 43511817  T
Q  118 aacttctaaacatgaaaggaaat 140  Q
    | ||||||||||||||| |||||    
T  43511816 agcttctaaacatgaaacgaaat 43511794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 5829677 - 5829567
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| ||  |||||||||||| ||     |||||||||||||||||||||| | |||| |||||||||||||||||||||||||||| |||     
T  5829677 taggaggctcggctctttatttaaaataggcctcaaataaaataaaaatgcaattttttttttgtagctaaactttattaaaaaatcagaatcagaagag 5829578  T
Q  120 cttctaaacat 130  Q
    |||||||||||    
T  5829577 cttctaaacat 5829567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 23461039 - 23461231
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| |||| |||||||||| || |||||||| |||||||| | ||| ||||| ||||| |  ||||| || |||||| |||    
T  23461039 aaagcaaaaactctaccagtagtcggcgccttcttaggttgtttgcactgggaaccaatattaccctcttccttgcaatcgaaacacacaatatcaccat 23461138  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |||||||  | ||||| |||||| ||||| || |||||| | ||    ||| | |||||| |||| |||||||||||||||||||    
T  23461139 gcttgcattcagctaaagtatgactcttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcac 23461231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 26736045 - 26735854
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||  |||| | || |||||||||||| |||| | ||  |||||||||||||||| |||||||| || ||||| ||   ||||||||    
T  26736045 aaagcaaaaactctactagtagtctgcgccttcttaggcttcttggattgcaaaccaatgtgaccttcctcattgcaattgaaacacacagcatcatcat 26735946  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||| |||||||| |||| ||| |  ||| | ||||| ||||| || || ||   || ||||||||||||||||||||| |||||||||||||    
T  26735945 gtttacactcagcaagtgtatgccatttcataccacaacgaaagcaccttttcacat-cccaggacaagcattactcttatggcctttctcac 26735854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 29156447 - 29156372
Alignment:
Q  58 aaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    ||||||||||| ||||||||| |||||| ||||||||||||||||||||| |||||||||| |||||||||||||||    
T  29156447 aaaataaaaatacaatttttt-tgtgtagctaaactttattaaaaaatcaaaatcagtagagcttctaaacatgaaa 29156372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 42291649 - 42291767
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || ||||||||| ||| ||| |  ||||||||||| |||||||||| ||||||  |||||||||| |||||||||||||||| |||     
T  42291649 taggaggctcggctctctatttaaa-tagccccccaataaaataaaaacgcaatttttt-tgtgtagttaaactttataaaaaaatcagaatcagaagag 42291746  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  42291747 cttctaaacatgaaacgaaat 42291767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 3349498 - 3349611
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || |||||||||||||  |  |  ||||||||||| |||||||||| |||||| |||| ||||||||||||||||||||||| |||     
T  3349498 taggaggctcggctctctatttaaaataggtctccaataaaataaaaacgcaatttttt-tgtgtagctaagctttattaaaaaatcagaatcagaagag 3349596  T
Q  120 cttctaaacatgaaa 134  Q
     ||||||||||||||    
T  3349597 tttctaaacatgaaa 3349611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 17513705 - 17513824
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||  || ||||||| ||||| ||| |  |||||||||||||||||| ||| ||||||  ||| |||||||||||||  |||||||| |||     
T  17513705 taggaggctcgactctctatttataataggcccccaataaaataaaaatgcaattattt-tgtgtagttaagctttattaaaaaaatagaatcagaagag 17513803  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  17513804 cttctaaacatgaaacgaaat 17513824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 346
Target Start/End: Original strand, 18782184 - 18782372
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||| ||||||||||| || |||||||| ||| | |||||||| || || || ||||| ||||||| | |     
T  18782184 agcaaaaactcgacccgtagtaggcgccctcttcggctgcttgcattgggaaccaatatgaacctcttcattacaattgaagcatacgatatcattacgc 18782283  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||| |||||||    |||||||||||| ||||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||||    
T  18782284 ttgcaatcagctacaatatgacccttcttgccacaccggacacattttttgatctcttcaggacaaacattactcttgtggcctttctc 18782372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 21631689 - 21631617
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatg 256  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||| || | |||||||||    
T  21631689 ccttcttaggcttcttgcactgcgaaccaatatgaccttcttcattgcagttgaaacacaccacatcatcatg 21631617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 7390174 - 7390279
Alignment:
Q  24 aggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttc 123  Q
    |||||||||||  | |||||||||| ||||   ||||||||||| | ||||||||||||||| |||| ||| ||||||||||| ||||||| |||||||     
T  7390174 aggctcggttctatttttaaaatagtccctaa-taaaataaaaacgtaattttttgtgtgtagctaagcttcattaaaaaatcggaatcagaagaacttt 7390272  T
Q  124 taaacat 130  Q
    |||||||    
T  7390273 taaacat 7390279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 23474266 - 23474454
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    ||||||||||| |  |||| | || ||||||| |||| ||| || || |||||||| | ||||||||||||||| || ||||| || | || |||||| |    
T  23474266 gcaaaaactctcctagtagtctgcgccttcttgggcttcttacattgcgaaccaatataaccttcttcattgcaattgaaacacacaacataatcatgct 23474365  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || ||||| || | ||| |||||||| ||||| |||||||| |  ||   || ||||||||||||||||||||| |||||||||||||    
T  23474366 tacattcagcaagagtatgccccttcttaccacaacgaaaacaccgtttcacat-cccaggacaagcattactcttatggcctttctcac 23474454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 29473391 - 29473306
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  29473391 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 29473306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 37288814 - 37288729
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  37288814 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 37288729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 10591044 - 10591161
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || ||||||||||||||| | |  |||| |||||| |||||||||| ||||||  ||| ||||||||||||||||||||||| | |     
T  10591044 taggaggctcggctctctatttaaaatagacgc-caataaa-taaaaacgcaatttttt-tgtgtagttaagctttattaaaaaatcagaatcagaatag 10591140  T
Q  120 cttctaaacatgaaaggaaat 140  Q
     |||||||||||||| |||||    
T  10591141 tttctaaacatgaaacgaaat 10591161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 10033809 - 10033733
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||||||||||||||||||  |  |||| ||  |||||||||||||||||| ||||||| |||||||||||    
T  10033809 gtaaaataaaaatgcaattttttgtgt--agttaaatttcgttaaaaaatcagaatcagaagaacttttaaacatgaaa 10033733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 12661551 - 12661485
Alignment:
Q  74 tttttgtgtgtaactaaactttattaaaaaa--tcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||| |||||| ||||| ||||||||||||  |||||||||| |||||||||||||||||||||||    
T  12661551 tttttttgtgtagctaaattttattaaaaaaaatcagaatcagaagaacttctaaacatgaaaggaa 12661485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 134
Target Start/End: Complemental strand, 17326137 - 17326027
Alignment:
Q  23 gaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaactt 122  Q
    ||||||||||||  | |||||||||| | | | ||||||| |||| |||||| ||| |||||| ||||| || ||||||||||||||||||| |||||||    
T  17326137 gaggctcggttctatttttaaaataggctc-cagtaaaatcaaaacgcaattctttttgtgtagctaaaattcattaaaaaatcagaatcagaagaactt 17326039  T
Q  123 ctaaacatgaaa 134  Q
     |||||| ||||    
T  17326038 ttaaacacgaaa 17326027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 22330205 - 22330120
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | |||||||||| |||| |||| ||| ||||||||||||||||    
T  22330205 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgcgaccctctccattgcagttaaaaca 22330120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 20803669 - 20803857
Alignment:
Q  160 caaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgttt 259  Q
    ||||||| || || |||| | ||||| ||||||||||||||||||| |||||||| ||||  ||||| ||||  || || || || ||||||  ||| ||    
T  20803669 caaaaacccttccagtagtcagcaccctcttaggctgcttgcactgagaaccaatatgactctcttccttgccattgaagcacacaatatcactatgctt 20803768  T
Q  260 gcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||| |||||||  | |||||||||||| ||||| |  |||||| | ||    ||| |||| ||| |||| |||||||||||||||||||    
T  20803769 gcagtcagctaaagtatgacccttcttgccacaccagaaacatttcttcacctcctcagggcaaacatttctcttgtggcctttctcac 20803857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 16515765 - 16515687
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||| ||| ||||||||||||| |||| ||| || ||||| ||||||| || |||||||  ||||||||||    
T  16515765 gtaaaataaaaacgcatttttttgtgtgtagctaagcttcatgaaaaagtcagaatgagaagaactttaaaacatgaaa 16515687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 33281933 - 33281856
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||| ||||| |||| ||||||  ||||||| ||||||| |||| |||||  |||||||||||||||||||    
T  33281933 gtaaaataaaaacgcaatctttt-tgtgtagttaaacttcattaaaagatcataatcaaaagaacttctaaacatgaaa 33281856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 18873719 - 18873642
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    ||||||||||| | |||||||  ||||||  ||||||| |||||||||| |||||||| | ||||| |||||||||||    
T  18873719 taaaataaaaacgtaatttttattgtgtagttaaacttcattaaaaaattagaatcagaaaaacttttaaacatgaaa 18873642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 22350987 - 22351072
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| |||| || ||||||| ||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  22350987 aaagcaaagaccctaccagtagtcggcgccctcttaggatgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 22351072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 26312230 - 26312165
Alignment:
Q  74 tttttgtgtgtaactaaactttattaaaaaa-tcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||| |||||| ||||| || ||||||||| |||||||||| |||| ||||||||||||||||||    
T  26312230 tttttttgtgtagctaaatttcattaaaaaaatcagaatcagaagaagttctaaacatgaaaggaa 26312165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 931664 - 931545
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    ||||||| |||| || || |||||||||||||    |||||| |||||||||| ||||| |||||||||||  |  |||  ||||||||||| || | ||    
T  931664 taggaggttcggctctctttttaaaatagacctctagtaaaacaaaaatgcaagttttt-tgtgtaactaagttgcattggaaaatcagaattagaaaaa 931566  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  931565 cttctaaacatgaaacgaaat 931545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 20976277 - 20976171
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||| || ||||||||||||| ||  |   || ||||||| |||||||||| |||||| |||  |||||||||||||||| |||||| |||     
T  20976277 taggaggctcggctctctatttaaaataggccacc---aatataaaaacgcaatttttt-tgtgtagctatgctttattaaaaaatcataatcagaagag 20976182  T
Q  120 cttctaaacat 130  Q
    ||| |||||||    
T  20976181 cttttaaacat 20976171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 139
Target Start/End: Original strand, 8379247 - 8379330
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaa 139  Q
    |||||||||||||| | |||||| ||||||  ||  ||| |||||||||| || ||||| ||| ||||||||||||||| ||||    
T  8379247 gtaaaataaaaatggatttttttttgtgtagttatgcttcattaaaaaataagtatcagaagatcttctaaacatgaaacgaaa 8379330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 13424081 - 13424042
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  13424081 aaaaaatcagaatcagaagaacttttaaacatgaaaggaa 13424042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 26377622 - 26377661
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  26377622 aaaaaatcagaatcagaagaagttctaaacatgaaaggaa 26377661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 4177420 - 4177382
Alignment:
Q  96 attaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  4177420 attaaaaaatcataatcagaagaacttctaaacatgaaa 4177382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 19099132 - 19099197
Alignment:
Q  71 aattttttgtgtgtaactaaactttattaaaaaa--tcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||| ||| || |||||||| ||| |||||  |||||||||| |||||||||||||||||||    
T  19099132 aattttttttgtttagctaaacttcattgaaaaaattcagaatcagaagaacttctaaacatgaaa 19099197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 37047078 - 37046961
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaa----tcagaatcagt 115  Q
    ||||||| |||| || || |||||||||| ||||  |||||||||||  | |||||||| |||||| ||||| ||||||||||||    ||||||| ||     
T  37047078 taggaggttcggctctctttttaaaataggcccttagtaaaataaaac-gtaatttttt-tgtgtagctaaattttattaaaaaaaaaatcagaattaga 37046981  T
Q  116 agaacttctaaacatgaaag 135  Q
    |||| |||||||||||||||    
T  37046980 agaagttctaaacatgaaag 37046961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 21631562 - 21631525
Alignment:
Q  311 atccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  21631562 atccccagtacaagcattactcgtgtggcctttctcac 21631525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 4734386 - 4734469
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttat-taaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||||||| |||||||||| |||||| ||||| |||||  ||||||| | |||||  ||| ||||||||||||||| |||||    
T  4734386 taaaataaaaacgcaatttttt-tgtgtagctaaattttataaaaaaaattaaaatcaaaagagcttctaaacatgaaacgaaat 4734469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 111046 - 110854
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| | || |||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||    
T  111046 aaagcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgcaattaaagcatactatatcatcat 110947  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||| ||||||||||||| |||||| ||||| ||||| ||||||||||| ||  | |||||| ||||||||||||||||||||||||||||||    
T  110946 gtttacactcagctagtgtatgacctttcttaccacatcgaaaacatctcttcatgtccccaagacaagcattactcttgtggcctttctcac 110854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 348
Target Start/End: Original strand, 18039 - 18202
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttc 284  Q
    ||||||||| | |||||| || ||  |||| |||||||||||||| |||||||||||||| | ||||||||| || ||||| |  || | ||| || |||    
T  18039 cttcttaggtttcttgcattgcgactcaatatgaccttcttcattacagttaaaacatacaacatcatcatgcttacactctgtaagcgtatgtcctttc 18138  T
Q  285 tttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    || ||||| || ||||| |  ||   |||||||| ||||||||||||||| |||||||||||||    
T  18139 ttaccacaacggaaacaccgcttcacatccccagaacaagcattactcttatggcctttctcac 18202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 2157 - 2346
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    |||||||||||||| |||| | || | |||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| || ||||| |||||||    
T  2157 gcaaaaactctaccagtagtctgcgcattcttaggcttcttgcactgtgaaccaatgtgaccttcctcattgcaattaaaacacacaatatcctcatgtt 2256  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||   ||||||| |||||||||| |||||||||||||||||||    
T  2257 tgcactcagctagtgcatgacccttcttaccacagcgaaaacacctattaacatccccatgacaagcattgctcttgtggcctttctcac 2346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 111; Significance: 6e-56; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 162 - 348
Target Start/End: Original strand, 188 - 374
Alignment:
Q  162 aaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgc 261  Q
    ||||||||||| |||||| || |||||||||||| ||| ||||| ||||||||||||||||| |||||||| ||||| || || |||||||||||||||     
T  188 aaaactctaccagtagcctgcgccttcttaggcttcttacactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaatatcatcatgtttgg 287  T
Q  262 actcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||   ||| ||||||||||||||||||||||||||||||||||    
T  288 actcagctagtgcatgacccttcttaccacagcgaaaccatctcttcacatctccaggacaagcattactcttgtggcctttctcac 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 162 - 348
Target Start/End: Original strand, 4605 - 4791
Alignment:
Q  162 aaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgc 261  Q
    ||||||||||| |||||| || |||||||||||| ||| ||||| ||||||||||||||||| |||||||| ||||| || || |||||||||||||||     
T  4605 aaaactctaccagtagcctgcgccttcttaggcttcttacactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaatatcatcatgtttgg 4704  T
Q  262 actcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||   ||| ||||||||||||||||||||||||||||||||||    
T  4705 actcagctagtgcatgacccttcttaccacagcgaaaccatctcttcacatctccaggacaagcattactcttgtggcctttctcac 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 109; Significance: 9e-55; HSPs: 5)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 54802 - 54994
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| |||||||  ||||||||| |||||||||||| ||| ||||  |||||||||||||| ||||||||||| |||||||| || ||||||||||    
T  54802 aaagcaaatactctactagtagccggcgccttcttaggcttcttacactacgaaccaatgtgaccctcttcattgcaattaaaacacacaatatcatcat 54901  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||| |||   |||| ||||||| |||||||||||||||| |||||||    
T  54902 gtttgcactcagctcgtgcatgacctttctttccacagcgaaaacatctcttgacgtccctaggacaaccattactcttgtggcccttctcac 54994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 32044 - 32234
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||| ||||| |||| |||| |||||||||||||||||||||| |||||||||||||| ||||| ||||  |  ||||| || ||||||| ||    
T  32044 aaagcaaaaaccctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcgttgcgatcgaaacacacaatatcattat 32143  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||||| ||||||| |||||||| |||||| ||||| || |||||||| ||    || |||||||||||||| |||||||||||||||||    
T  32144 gtttgcaatcagctaatgcatgactcttcttaccacaccggaaacatctttttacctctccaggacaagcattgctcttgtggcctttctc 32234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 37510 - 37700
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||| ||||| |||| |||| |||||||||||||||||||||| |||||||||||||| ||||| ||||  |  ||||| || ||||||| ||    
T  37510 aaagcaaaaaccctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcgttgcgatcgaaacacacaatatcattat 37609  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||||| ||||||| |||||||| |||||| ||||| || |||||||| ||    || |||||||||||||| |||||||||||||||||    
T  37610 gtttgcaatcagctaatgcatgactcttcttaccacaccggaaacatctttttacctctccaggacaagcattgctcttgtggcctttctc 37700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 344
Target Start/End: Complemental strand, 10375 - 10190
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| |||  |||  ||| || ||||||||||| |||| ||||||||||||||||| |||||||| || || || || || ||||||| |||     
T  10375 agcaaaaactcgacccatagtaggcgccctcttaggctgcgtgcattgtgaaccaatgtgacc-tcttcattacaattgaagcacacaatatcattatgc 10277  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
    ||||| |||||||    |||||||||||| ||||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||    
T  10276 ttgcaatcagctacaatatgacccttcttaccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttc 10190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 344
Target Start/End: Complemental strand, 13030 - 12845
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| |||  |||  ||| || ||||||||||| |||| ||||||||||||||||| |||||||| || || || || || ||||||| |||     
T  13030 agcaaaaactcgacccatagtaggcgccctcttaggctgcgtgcattgtgaaccaatgtgacc-tcttcattacaattgaagcacacaatatcattatgc 12932  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
    ||||| |||||||    |||||||||||| ||||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||    
T  12931 ttgcaatcagctacaatatgacccttcttaccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttc 12845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 18818 - 19007
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    ||||||||||||||  ||| | || |||||||||||| ||| ||| | ||||||||||||||||| |||||||| ||||| || || |||||||||||||    
T  18818 gcaaaaactctaccaatagtctgcgccttcttaggcttcttacacagcgaaccaatgtgaccttcctcattgcaattaaagcacacaatatcatcatgtt 18917  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||||||||| |||||||||||||| || ||   |||||| |||||||||||||||||||||||||||||||    
T  18918 tgcactcagctagtgcatgacccttcttaccacagcgaaaacacctcttcacatccccgggacaagcattactcttgtggcctttctcac 19007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 159 - 344
Target Start/End: Original strand, 3719 - 3904
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    |||||||||||||| |||| | || |||||||||||| ||||||||||||||||||||||||||| |||||||| ||||| || || |||||||||| ||    
T  3719 gcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgtgaaccaatgtgaccttcctcattgcaattaaagcacacaatatcatcatttt 3818  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
    |||||||||||||||||||||| ||||| ||||| |||||||| || ||   |||||||||||||||||||||||||||| |||||    
T  3819 tgcactcagctagtgcatgacctttcttaccacaacgaaaacacctcttcacatccccaggacaagcattactcttgtggtctttc 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 181 - 348
Target Start/End: Original strand, 10976 - 11142
Alignment:
Q  181 gcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacc 280  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||||||    
T  10976 gcaccttcttaggcttcttacactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaatatcatcatgtttgcactcagctagtgcatgacc 11075  T
Q  281 cttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||| ||||||||||||||||| ||   || |||||||||||||||||||||||||| ||||||||    
T  11076 cttcttaccacagcgaaaacatcttttcacat-cccaggacaagcattactcttgtggcatttctcac 11142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 101; Significance: 5e-50; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 41797 - 41989
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| | || |||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||| || || ||||||||||    
T  41797 aaagcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaatatcatcat 41896  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||    |||||||||||||||||||||||||| ||||||||||    
T  41897 gtttacactcagcaagtgcatgacctttcttcccacaacgaaagcatcttttcacgtccccaggacaagcattactcttgtgacctttctcac 41989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 75517 - 75709
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| | || |||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||| || || ||||||||||    
T  75517 aaagcaaaaactctaccagtagtctgcgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaatatcatcat 75616  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||    |||||||||||||||||||||||||| ||||||||||    
T  75617 gtttacactcagcaagtgcatgacctttcttcccacaacgaaagcatcttttcacgtccccaggacaagcattactcttgtgacctttctcac 75709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 304
Target Start/End: Complemental strand, 34854 - 34706
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||| ||||| |||| |||| ||||||||||| |||| ||||| |||||||||||||| |||||||| ||||| || || || ||||||| ||    
T  34854 aaagcgaaaaccctaccagtagtcggcgccttcttaggcagcttacactgcgaaccaatgtgaccctcttcattacagttgaagcacacaatatcattat 34755  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatct 304  Q
    |||||||||||||||||||||| |||||||| ||||| || ||||||||    
T  34754 gtttgcactcagctagtgcatggcccttcttaccacatcggaaacatct 34706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 99; Significance: 8e-49; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 162 - 348
Target Start/End: Complemental strand, 24078 - 23892
Alignment:
Q  162 aaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgc 261  Q
    |||||||| || |||| | || |||||||||||| |||||| || ||||||||||||||||| |||||||| ||||| ||| || |||||||||||||||    
T  24078 aaaactctcccagtagtctgcgccttcttaggcttcttgcattgcgaaccaatgtgaccttcctcattgcaattaaagcattctgtatcatcatgtttgc 23979  T
Q  262 actcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||| | ||||| ||||| ||||||||||| ||    |||||||||||||||||||||||||||||||||||||    
T  23978 actcagctagtgcatgatctttcttaccacatcgaaaacatctttttacgtccccaggacaagcattactcttgtggcctttctcac 23892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 1147 - 1339
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| |||| |||||||||||| ||| |||||||||||||||||||| || | |||||| ||||| || || || ||||| |    
T  1147 aaagcaaaaactctaccagtagtcggcgccttcttaggcttcttacactgtgaaccaatgtgaccctcctaattgcaattaaagcacacaatgtcatcgt 1246  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || ||||||||||||| |||||| ||||| |||||| |||||||||| ||   ||||||||||||||||||||||||||||||||||||||    
T  1247 gcttacactcagctagtgtatgacctttcttaccacagggaaaacatctctttacatccccaggacaagcattactcttgtggcctttctcac 1339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 201 - 348
Target Start/End: Complemental strand, 4649 - 4502
Alignment:
Q  201 cactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctttccacagcgaaaac 300  Q
    ||||| ||||||||||||||||| |||||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  4649 cactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaatatcatcatgtttgcactcagctagtgcatgacccttcttaccacaacgaaaac 4550  T
Q  301 atctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||| ||   ||||||||||||||||||||||||||||||||| ||||    
T  4549 atctcttcacatccccaggacaagcattactcttgtggcctttttcac 4502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0611 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 223 - 348
Target Start/End: Complemental strand, 9515 - 9390
Alignment:
Q  223 cttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggaca 322  Q
    |||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||  ||||||||||| |||  ||||||||||||    
T  9515 cttcattgcaattaaaacatactatatcatcatgtttgcacacaactagtgcatgacccttctttccactacgaaaacatctcttgacatccccaggaca 9416  T
Q  323 agcattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||||    
T  9415 agcattactcttgtggcctttctcac 9390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 3710 - 3899
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    |||||||||||||  |||| | || |||||||||||| ||||||||| ||||||||||||||||| |||||||| |||||  |||| |||||||||||||    
T  3710 gcaaaaactctacaagtagtctgcgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgcaattaaagaatacaatatcatcatgtt 3809  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | |||||||| |||| ||| |||||||| ||||| ||||||||||| ||   ||| || |||||||||||||| ||||||||||||||||    
T  3810 tacactcagcaagtgtatgtcccttcttcccacaacgaaaacatcttttcacatctccgggacaagcattacttttgtggcctttctcac 3899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 55606 - 55418
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    ||||||||||| || |||| | || |||||||| ||| |||||| |||||||  || |||||||| |||||||||||||| || || |||||||||||||    
T  55606 gcaaaaactctcccagtagtctgcgccttcttaagcttcttgcattgtgaacttatatgaccttcctcattgcagttaaagcacacaatatcatcatgtt 55507  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||| ||   || ||||||| |||||||||||||||||||||||||||    
T  55506 tgcactcagctagtgcatgacctttcttaccatagcgaaaacatctttttacat-cccaggataagcattactcttgtggcctttctcac 55418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 348
Target Start/End: Original strand, 47926 - 48087
Alignment:
Q  186 ttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttct 285  Q
    ||||| |||| ||| || |||||||| || |||||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||||    
T  47926 ttctttggcttcttacattgtgaacctatatgaccttcctcattgcagttaaagcacacaatatcatcatgtttgcactcagctagtgcatgacctttct 48025  T
Q  286 ttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||| ||||||||||||| ||   || |||||||||||||||||||||||||||||||||||    
T  48026 taccatagcgaaaacatctttttacat-cccaggacaagcattactcttgtggcctttctcac 48087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 15908 - 15720
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    ||||||||||| || |||| | || |||||||| ||| |||||| |||||||  || |||||||| |||||||||||||| || || |||||||||||||    
T  15908 gcaaaaactctcccagtagtctgcgccttcttaagcttcttgcattgtgaacttatatgaccttcctcattgcagttaaagcacacaatatcatcatgtt 15809  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||| ||||| ||| ||||||||||||| ||   || ||||||| |||||||||||||||||||||||||||    
T  15808 tgcactcagctagtgcatgacctttcttaccatagcgaaaacatctttttacat-cccaggataagcattactcttgtggcctttctcac 15720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 159 - 344
Target Start/End: Original strand, 14162609 - 14162794
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    |||||||||||||| |||| | || ||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| || || | ||| ||||| |    
T  14162609 gcaaaaactctaccagtagtctgcgccttcttaggctgtttgcactgcgaaccaatgtgaccttcctcattgcaattaaagcacacaacatcttcatgct 14162708  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
    | |||||||| |||| |||||| ||||| ||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||    
T  14162709 tacactcagcaagtgtatgacctttcttaccacagcgaaaacatctcttcacatccccaggacaagcatcactcttgtggcctttc 14162794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 186 - 348
Target Start/End: Original strand, 8203 - 8364
Alignment:
Q  186 ttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttct 285  Q
    ||||| |||| ||| || |||||||| || |||||||| |||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||||    
T  8203 ttctttggcttcttacattgtgaacctatatgaccttcctcattgcagttaaagcacacaatatcatcatgtttgcactcagctagtgcatgacctttct 8302  T
Q  286 ttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||| ||||||||||||| ||   || |||||||||||||||||||||||||||||||||||    
T  8303 taccatagcgaaaacatctttttacat-cccaggacaagcattactcttgtggcctttctcac 8364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 304
Target Start/End: Complemental strand, 15144768 - 15144620
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||| ||||| |||| |||| ||||||||||| |||| ||||| |||||||||||||| |||||||| ||||| || || || ||||||| ||    
T  15144768 aaagcgaaaaccctaccagtagtcggcgccttcttaggcagcttacactgcgaaccaatgtgaccctcttcattacagttgaagcacacaatatcattat 15144669  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatct 304  Q
    |||||||||||||||||||||| |||||||| ||||| || ||||||||    
T  15144668 gtttgcactcagctagtgcatggcccttcttaccacatcggaaacatct 15144620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 16219324 - 16219514
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| |||| | |||| ||||| |||||| || |||||||| ||||||||||||||||| ||||| || || | ||||||||    
T  16219324 aaagcaaaaactctcccagtagtcggcgctttctcaggcttcttgcattgcgaaccaatatgaccttcttcattgcaattaaagcacacaacatcatcat 16219423  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    |||| |||||| | |||| ||| |||||||| ||||| ||||| || |  ||   |||||||||||||||||||||||| |||||||||||    
T  16219424 gtttacactcaacaagtgtatgtcccttcttaccacaacgaaagcaccgtttcacatccccaggacaagcattactcttatggcctttctc 16219514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 156 - 346
Target Start/End: Original strand, 16222644 - 16222834
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| |||| | |||| ||||| |||||| || |||||||| ||||||||||||||||| ||||| || || | ||||||||    
T  16222644 aaagcaaaaactctcccagtagtcggcgctttctcaggcttcttgcattgcgaaccaatatgaccttcttcattgcaattaaagcacacaacatcatcat 16222743  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    |||| |||||| | |||| ||| |||||||| ||||| ||||| || |  ||   |||||||||||||||||||||||| |||||||||||    
T  16222744 gtttacactcaacaagtgtatgtcccttcttaccacaacgaaagcaccgtttcacatccccaggacaagcattactcttatggcctttctc 16222834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 140
Target Start/End: Complemental strand, 34982520 - 34982401
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    ||||||||||||||| ||||| |||||||  ||||  |||||||||||||||||||||| ||||||  ||| |||||||| |||||||||||||| ||||    
T  34982520 taggaggctcggttctctattgaaaataggtcctcaataaaataaaaatgcaattttttttgtgtagttaagctttatta-aaaatcagaatcagaagaa 34982422  T
Q  120 cttctaaacatgaaaggaaat 140  Q
     |||||||||| ||| |||||    
T  34982421 attctaaacataaaacgaaat 34982401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 19635272 - 19635357
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| |||||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  19635272 aaagcaaagactctaccagtagtcggcgccttcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 19635357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 140
Target Start/End: Complemental strand, 55134501 - 55134385
Alignment:
Q  23 gaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaactt 122  Q
    ||||||||| || |||||||||||||  || |  |||||||||||  ||||||||| |||||| |||| ||||||||||||||||| ||||  ||| |||    
T  55134501 gaggctcggctctctatttaaaataggtccccaataaaataaaaacacaatttttt-tgtgtagctaagctttattaaaaaatcaggatcaaaagagctt 55134403  T
Q  123 ctaaacatgaaaggaaat 140  Q
    |||||||||||| |||||    
T  55134402 ctaaacatgaaacgaaat 55134385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 346
Target Start/End: Original strand, 13513488 - 13513676
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  |||||| |||||||||||||||| || |||||||| ||||| |||||||| || || || || || |||||||   |     
T  13513488 agcaaaaactcgaccagtagtaggcaccctcttaggctgcttgcattgggaaccaatatgaccctcttcattacaattgaagcacacaatatcatttcgc 13513587  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||| |||||||    |||||||||||| ||||| || | |||| | ||| | ||  |||||||| |||| |||||||||||||||||    
T  13513588 ttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctc 13513676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 24449342 - 24449281
Alignment:
Q  73 ttttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||| ||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||    
T  24449342 ttttttttgtgtaactaagcttcattaaaaaatcagaatcagaagaacttttaaacatgaaa 24449281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 21791354 - 21791436
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||||| |||||||||||||  |||| | ||||||||||||||||| | |||||||| ||||||||||||||||||| |||||    
T  21791354 gtaaaatagaaatgcaatttttc-tgtgcagctaaactttattaaaaatt-agaatcagaagaacttctaaacatgaaatgaaat 21791436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 23425984 - 23426053
Alignment:
Q  71 aattttttgtgtgtaactaaactttattaaaaaa--tcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||| |||||| ||||| ||||||||||||  | |||||||| |||||||||||||||||||||||    
T  23425984 aattttttttgtgtagctaaattttattaaaaaaaattagaatcagaagaacttctaaacatgaaaggaa 23426053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 32130610 - 32130677
Alignment:
Q  74 tttttgtgtgtaactaaactttattaaaa---aatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||| |||||| ||||| ||||||||||   |||||||||||| |||||||||||||||||||||||    
T  32130610 tttttttgtgtagctaaattttattaaaaaaaaatcagaatcagaagaacttctaaacatgaaaggaa 32130677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 53012010 - 53011892
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaa--tcagaatcagtag 117  Q
    |||||||||||| || || |||||||||| | |   |||||||||||  | |||||||| |||||| ||||| || |||||||||  |||||||||| ||    
T  53012010 taggaggctcggctctctttttaaaataggctcatagtaaaataaaac-gtaatttttt-tgtgtagctaaatttcattaaaaaaaatcagaatcagaag 53011913  T
Q  118 aacttctaaacatgaaaggaa 138  Q
    |||||||||||||||||||||    
T  53011912 aacttctaaacatgaaaggaa 53011892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 27632614 - 27632575
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  27632614 aaaaaatcagaatcagaagaacttctaaacatgaaaggaa 27632575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 41038547 - 41038426
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttatt-----aaaaaatcagaatcag 114  Q
    |||||||||||| || || |||||||||| |||   ||||||| |||||| |||||||| |||||| ||||| || |||     ||||||||| ||||||    
T  41038547 taggaggctcggctctctttttaaaataggcccctagtaaaat-aaaatgtaattttttttgtgtagctaaa-ttcattaaaaaaaaaaatcaaaatcag 41038450  T
Q  115 tagaacttctaaacatgaaaggaa 138  Q
     |||||||||||||||||||||||    
T  41038449 aagaacttctaaacatgaaaggaa 41038426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Original strand, 35653784 - 35653862
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    ||||||||||||  || |||||||||||||  ||| ||| |||||||| || ||||||| ||||||| |||||||||||    
T  35653784 gtaaaataaaaacacatttttttgtgtgtagttaagcttcattaaaaagtccgaatcagaagaacttttaaacatgaaa 35653862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 14683703 - 14683788
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||||| ||||| |||| |||| || ||||||||||  | |||| ||||| ||| || || ||||||||||||||||||||    
T  14683703 aaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatatgtccctcttcattgcagttaaaaca 14683788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 19661595 - 19661556
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  19661595 aaaaaaacagaatcagaagaacttctaaacatgaaaggaa 19661556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 29221469 - 29221508
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  29221469 aaaaaatcagaatcagaagaacttctaaatatgaaaggaa 29221508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 26328852 - 26328918
Alignment:
Q  75 ttttgtgtgtaactaaactttattaaaa-aatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||| |||||| |||||||| ||||||| ||||||||| || |||| |||||||||||||| |||||    
T  26328852 ttttttgtgtagctaaacttcattaaaaaaatcagaattagaagaatttctaaacatgaaaagaaat 26328918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 51066080 - 51066138
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaatttttt 78  Q
    ||||||||||||||| ||||||||||||| |||   |||||||| ||||| ||||||||    
T  51066080 taggaggctcggttctctatttaaaataggcccctcgtaaaatagaaatgtaatttttt 51066138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 348
Target Start/End: Original strand, 14697392 - 14697429
Alignment:
Q  311 atccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  14697392 atccccaagacaagcattactcttatggcctttctcac 14697429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 40476176 - 40476261
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| |||| || |||||||| |  | |||||||||| ||||||||| ||| | ||||||||||||||    
T  40476176 aaagcaaagaccctaccagtagtcggcgccctcttaggccgagtacactgtgaactaatgtgaccctctccgttgcagttaaaaca 40476261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 9925332 - 9925292
Alignment:
Q  81 gtgtaactaaactttattaaaaaatcagaatcagtagaact 121  Q
    ||||| |||| ||||||||||||||||||||||| ||||||    
T  9925332 gtgtagctaagctttattaaaaaatcagaatcagaagaact 9925292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 14697266 - 14697322
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||| | |||||| ||||| ||||| ||||||||||||||||| || |||||    
T  14697266 cttcttaggtttcttgcattgtgacccaatatgaccttcttcattgcaattgaaaca 14697322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 21769 - 21961
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||| |||||| |||| |||| |||||||||||||||||||||  |||||||||||||| ||||||||||| || || || || ||||||| ||    
T  21769 aaagcaaaaagtctaccagtagtcggcgccttcttaggctgcttgcactaagaaccaatgtgaccctcttcattgcaattgaagcacacaatatcattat 21868  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| ||||||||||||||||||||||| ||||| || |||||||| ||  | || | ||||||||||||  ||||||||||||||||||    
T  21869 ggttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttatctctcgaggacaagcattgatcttgtggcctttctcac 21961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 37193 - 37385
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||| |||||| |||| |||| |||||||||||||||||||||  |||||||||||||| ||||||||||| || || || || ||||||| ||    
T  37193 aaagcaaaaagtctaccagtagtcggcgccttcttaggctgcttgcactaagaaccaatgtgaccctcttcattgcaattgaagcacacaatatcattat 37292  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| ||||||||||||||||||||||| ||||| || |||||||| ||  | || | ||||||||||||  ||||||||||||||||||    
T  37293 ggttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttatctctcgaggacaagcattgatcttgtggcctttctcac 37385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 7e-43; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 14042848 - 14043012
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgaccctt 283  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||||| || || |||||||||||||||||||| ||||||||||||| ||| || ||    
T  14042848 ccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgcaatttaatcatactatatcatcatgtttacactcagctagtgtatgtccttt 14042947  T
Q  284 ctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||| | ||| ||||| ||  | |||| | ||||||||||||||||||||||||||||||    
T  14042948 ctttccacatctaaatcatcttttcatgtccctatgacaagcattactcttgtggcctttctcac 14043012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 14352878 - 14353042
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgaccctt 283  Q
    |||||||||||| ||||||||| ||||||||||||||||| |||||||| || || |||||||||||||||||||| ||||||||||||| ||| || ||    
T  14352878 ccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgcaatttaatcatactatatcatcatgtttacactcagctagtgtatgtccttt 14352977  T
Q  284 ctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||| | ||| ||||| ||  | |||| | ||||||||||||||||||||||||||||||    
T  14352978 ctttccacatctaaatcatcttttcatgtccctatgacaagcattactcttgtggcctttctcac 14353042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 15146068 - 15145876
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||  |||| | |||||||||||||||  ||||| || ||||||||||||||||| || | |||||||||||| || || |  ||||    
T  15146068 aaagcaaaaactctactagtagtccgcaccttcttaggctatttgcattgcgaaccaatgtgaccttcctcctcgcagttaaaacacacaattttttcat 15145969  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || ||||| ||||||| |||| | ||||| |||||| ||||||| || ||   ||| |||||||||||||||||| |||||||||||||||    
T  15145968 gcttacactcggctagtgtatgaactttcttaccacagtgaaaacacctcttcacatctccaggacaagcattactcctgtggcctttctcac 15145876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 36438121 - 36438233
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||||||  | |||||||||| || || ||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||    
T  36438121 taggaggctcggttctatttttaaaataggcc-tcagtaaaataaaaatgcaatttt-tgtgtgtagctaagcttcattaaaaaatcagaatcagaagaa 36438218  T
Q  120 cttctaaacatgaaa 134  Q
    ||| |||||||||||    
T  36438219 cttttaaacatgaaa 36438233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 1366300 - 1366185
Alignment:
Q  24 aggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttc 123  Q
    |||||||| || |||||||||||||| || |  ||||||||||| | |||||||| |||||| |||| ||||||||||||||||||||||| ||| |||     
T  1366300 aggctcggctctctatttaaaatagatccccaataaaataaaaacgtaatttttt-tgtgtagctaagctttattaaaaaatcagaatcagaagagcttg 1366202  T
Q  124 taaacatgaaaggaaat 140  Q
    ||||||||||| |||||    
T  1366201 taaacatgaaacgaaat 1366185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 25610343 - 25610242
Alignment:
Q  36 ctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaag 135  Q
    ||||||||||||||||| |  |||||||||||||||||||||| |||  | |||| ||||||||||||||||||||||| ||| |||| ||||||||||     
T  25610343 ctatttaaaatagaccc-caataaaataaaaatgcaattttttttgt--agctaagctttattaaaaaatcagaatcagaagagcttccaaacatgaaac 25610247  T
Q  136 gaaat 140  Q
    |||||    
T  25610246 gaaat 25610242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 42312287 - 42312186
Alignment:
Q  39 tttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||||||||  || | ||||||||||||  ||||||||||||||||  ||| ||| |||||||||| |||||||| ||||||||||||||||||| |||    
T  42312287 tttaaaataggtccactgtaaaataaaaacacaattttttgtgtgtagttaagcttcattaaaaaattagaatcagaagaacttctaaacatgaaacgaa 42312188  T
Q  139 at 140  Q
    ||    
T  42312187 at 42312186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 30739385 - 30739301
Alignment:
Q  59 aaataaaaatgcaattttt---tgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||||||||||||||||   | |||||| |||||||| ||||||||||||||||||| |||||||||| |||||||| |||||    
T  30739385 aaataaaaatgcaatttttgtttttgtgtagctaaacttcattaaaaaatcagaatcagaagaacttctatacatgaaatgaaat 30739301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 28589948 - 28590033
Alignment:
Q  56 gtaaaataaaaatgcaattttttgt-gtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||||||||| | |||||||| | ||||| |||||||| ||||||||||||||||||| |||| |||||||||||||| |||||    
T  28589948 gtaaaataaaaacgtaatttttttttgtgtagctaaacttcattaaaaaatcagaatcagaagaatttctaaacatgaaatgaaat 28590033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 26282301 - 26282396
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaa-ttttttgtgtgtaactaaactttattaaaaaatcagaatcag 114  Q
    |||||||||||| || ||||||||||||| ||| |  ||||||||||| |||| |||||| ||||||  ||| |||||||||||||||||||||||    
T  26282301 taggaggctcggctcactatttaaaataggcccccaataaaataaaaaagcaatttttttttgtgtagttaagctttattaaaaaatcagaatcag 26282396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 40841049 - 40841132
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttattaaaa--aatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||||||||||||||||||||||  | |||| |||||||||||  ||||||||| || ||||||||||||||||||| |||||    
T  40841049 taaaataaaaatgcaattttttgtgt--agctaagctttattaaaaaaaatcagaattagaagaacttctaaacatgaaacgaaat 40841132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 11234358 - 11234273
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  11234358 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 11234273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 344
Target Start/End: Complemental strand, 16726555 - 16726398
Alignment:
Q  187 tcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctt 286  Q
    |||| ||||||||||| || |||||||||||||| |||||||| ||||| || || || ||||||| | | ||||| |||||||    ||||||||| ||    
T  16726555 tcttcggctgcttgcattgggaaccaatgtgaccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttttt 16726456  T
Q  287 tccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
     ||||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||    
T  16726455 gccacatcggacacatttcttgatctcttcaggacaaacattactcttgtggcctttc 16726398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 344
Target Start/End: Complemental strand, 17703569 - 17703412
Alignment:
Q  187 tcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctt 286  Q
    |||| ||||||||||| || |||||||||||||| |||||||| ||||| || || || ||||||| | | ||||| |||||||    ||||||||| ||    
T  17703569 tcttcggctgcttgcattgggaaccaatgtgaccctcttcattacagttgaagcacacaatatcattacgcttgcaatcagctacaatatgacccttttt 17703470  T
Q  287 tccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
     ||||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||    
T  17703469 gccacatcggacacatttcttgatctcttcaggacaaacattactcttgtggcctttc 17703412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 348
Target Start/End: Original strand, 11984121 - 11984309
Alignment:
Q  160 caaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgttt 259  Q
    ||||||||| ||| ||||  ||| || |||||||||||||||| || |||||||| ||||| ||||||||| | || || || || ||||||| | | ||    
T  11984121 caaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattgaaattgaagcacacaatatcattacgctt 11984220  T
Q  260 gcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||| |||||||    |||||||||||| ||||| || | |||| | ||| | ||  ||| |||| |||| |||||||||||||||||||    
T  11984221 gcaatcagctacaatatgacccttcttgccacaccggacacatttcttgatctcttcagtacaaacattgctcttgtggcctttctcac 11984309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 3799593 - 3799651
Alignment:
Q  82 tgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||| |||||||| ||| ||||||||||||||| ||||||||||||||||||| |||||    
T  3799593 tgtagctaaacttcatttaaaaatcagaatcagaagaacttctaaacatgaaacgaaat 3799651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 15627677 - 15627755
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    |||||||||||| ||| ||||| |||||||| ||||| |||||||||||||| ||||| || | ||||||||| |||||    
T  15627677 ccttcttaggctactttcactgcgaaccaatatgaccctcttcattgcagttgaaacacaccacatcatcatgcttgca 15627755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 26633606 - 26633545
Alignment:
Q  73 ttttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||| |||||| |||| ||| ||||||||||||||||||| ||||| |||||||||||||    
T  26633606 ttttttttgtgtagctaagcttcattaaaaaatcagaatcagaagaacgtctaaacatgaaa 26633545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 32957026 - 32956949
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    |||||||||| ||||||||||| |||| | |||| ||| |||||||||||| || ||  |||||||||||||||||||    
T  32957026 taaaataaaactgcaattttttttgtgaagctaagcttcattaaaaaatcaaaaccaaaagaacttctaaacatgaaa 32956949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 346
Target Start/End: Original strand, 9591491 - 9591679
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||| ||||||||||| || |||||||| ||||| |||||||| || || || || || |||||||   |     
T  9591491 agcaaaaactcgacctgtagtaggctccctcttcggctgcttgcattgggaaccaatatgaccctcttcattacaattgaagcacacaatatcatttcgc 9591590  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||| |||||||    |||||||||||| ||||| || | |||| | ||| | ||  |||||||| |||| |||||||||||||||||    
T  9591591 ttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctc 9591679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 29730858 - 29730974
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||  || || |||||||||| ||| | |||||||||||||  |||||||| | |||| ||||  || |||||||||||| |||||| | ||    
T  29730858 taggaggctcgactctctttttaaaataggcccccagtaaaataaaaat--aatttttttt-tgtagctaagtttcattaaaaaatcacaatcagaaaaa 29730954  T
Q  120 cttctaaacatgaaaggaaa 139  Q
    ||||||||||||||| ||||    
T  29730955 cttctaaacatgaaacgaaa 29730974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 29742089 - 29741973
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||  || || |||||||||| ||| | ||||||||||||  ||||||||| | |||| ||||  || |||||||||||| |||||| | ||    
T  29742089 taggaggctcgactctctttttaaaataggcccccagtaaaataaaaa--caatttttttt-tgtagctaagtttcattaaaaaatcacaatcagaaaaa 29741993  T
Q  120 cttctaaacatgaaaggaaa 139  Q
    ||||||||||||||| ||||    
T  29741992 cttctaaacatgaaacgaaa 29741973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 7636144 - 7636210
Alignment:
Q  74 tttttgtgtgtaactaaactttatt--aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||| |||||| |||||||| |||  |||||||||||||||| | |||||||||||||||||||||    
T  7636144 tttttttgtgtagctaaacttcattgaaaaaaatcagaatcagaacaacttctaaacatgaaaggaa 7636210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 12251135 - 12251174
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  12251135 aaaaaatcagaatcagaagaacttctaaacatgaaaggaa 12251174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 12690626 - 12690709
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaa 239  Q
    ||||||||||| ||||| |||| |||| || ||||||||||  | |||||||||| ||| || || ||||||||||||||||||    
T  12690626 aaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatatgtccctcttcattgcagttaaaa 12690709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 40001517 - 40001599
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    |||||||||||||||||||||| ||||||  ||| |||||||| ||||  ||||| || ||| ||||||||||||||| |||||    
T  40001517 taaaataaaaatgcaatttttt-tgtgtagttaagctttattagaaaaatagaattagaagagcttctaaacatgaaacgaaat 40001599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 773686 - 773771
Alignment:
Q  57 taaaataaaaatgcaattttttgtgt--gtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||||||||| |||||||| | |  |||  ||| ||| |||||||||||| |||||| ||||||||||||||||||| |||||    
T  773686 taaaataaaaatgtaattttttttttatgtagttaagcttcattaaaaaatcaaaatcagaagaacttctaaacatgaaacgaaat 773771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 4100170 - 4100135
Alignment:
Q  103 aatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||| |||||||||||||||||||||||    
T  4100170 aatcagaatcagaagaacttctaaacatgaaaggaa 4100135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 18015428 - 18015467
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  18015428 aaaaaatcagaattagaagaacttctaaacatgaaaggaa 18015467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 33910360 - 33910241
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaa---tcagaatcagta 116  Q
    |||||||||||| || || |||||||||| |||   |||||||||||  | ||| |||| |||||| |||||||| |||||||||   ||||||| || |    
T  33910360 taggaggctcggctctctttttaaaataggcccctagtaaaataaaac-gtaatatttt-tgtgtagctaaacttcattaaaaaaaaatcagaataagaa 33910263  T
Q  117 gaacttctaaacatgaaaggaa 138  Q
     |||||||||||||||||||||    
T  33910262 taacttctaaacatgaaaggaa 33910241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 41908414 - 41908359
Alignment:
Q  80 tgtgtaactaaactttattaaaaaa-tcagaatcagtagaacttctaaacatgaaa 134  Q
    ||||||||||| ||| ||||||||| |||||||||| | |||||||||||||||||    
T  41908414 tgtgtaactaagcttcattaaaaaaatcagaatcagaaaaacttctaaacatgaaa 41908359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 42160970 - 42161009
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  42160970 aaaaaatcagaatcagaataacttctaaacatgaaaggaa 42161009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 44002762 - 44002821
Alignment:
Q  81 gtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||| |||| ||| |||||||||| | |||||| ||||||||||||||||||| |||||    
T  44002762 gtgtagctaagcttcattaaaaaattataatcagaagaacttctaaacatgaaatgaaat 44002821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 15114355 - 15114433
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    |||||||||||| ||||||||| |||| ||| ||||||||||| || |||||| | || || ||||||| ||| |||||    
T  15114355 ccttcttaggcttcttgcactgcgaactaatatgaccttcttccttacagttatagcaaaccatatcattatgattgca 15114433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 128
Target Start/End: Original strand, 41852089 - 41852177
Alignment:
Q  38 atttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaac 128  Q
    ||||||||||||||| |||||||||||||| | ||||  || |||||| ||||  || ||||| ||||||||||||| ||||||| |||||    
T  41852089 atttaaaatagaccc-cggtaaaataaaaacgtaattgatt-tgtgtagctaagtttcattaagaaatcagaatcagaagaacttttaaac 41852177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 11550247 - 11550162
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||||| ||||| |||| |||| || ||||||||||  | |||| ||||| ||| || || ||| ||||||||||||||||    
T  11550247 aaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatatgtccctctccattgcagttaaaaca 11550162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 12459781 - 12459834
Alignment:
Q  183 accttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagtta 236  Q
    |||||||| |||||  | |||||||||| ||| |||||||||||||||||||||    
T  12459781 accttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagtta 12459834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 33418933 - 33419003
Alignment:
Q  71 aattttttgtgtgtaactaaactttattaaaa---aatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||| ||||||  |||| ||||||||||   |||||||||||| |||| ||||||||||||| ||||    
T  33418933 aattttttttgtgtagttaaattttattaaaaaaaaatcagaatcagaagaagttctaaacatgaatggaa 33419003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 46221550 - 46221586
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaag 135  Q
    ||||||||||||| || ||||||||||||||||||||    
T  46221550 aaaaaatcagaattagaagaacttctaaacatgaaag 46221586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 348
Target Start/End: Complemental strand, 43564 - 43400
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgaccctt 283  Q
    ||||| |||| | ||||||||||||||||||||||||||  |||||||| ||||| || || ||||||||||||||||||||||||||||||||||| ||    
T  43564 ccttcataggattcttgcactgtgaaccaatgtgacctttctcattgcaattaaagcacacaatatcatcatgtttgcactcagctagtgcatgaccttt 43465  T
Q  284 ctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||| |||||  ||||||| |  ||   ||| ||||||||||||||||||||||||||||||||||    
T  43464 cttaccacaatgaaaacaccacttcacatctccaggacaagcattactcttgtggcctttctcac 43400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 30713 - 30521
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||  |||| |||| |||||||||  ||||||||||| |||||||||| ||| ||||||||||| || || || || |  |||| ||    
T  30713 aaagcgaaaactctactagtagtcggcgccttcttagattgcttgcactgagaaccaatgtaaccctcttcattgcaattgaagcacacaaggtcattat 30614  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||| ||||||||||||||||||||||| ||||| || |||||||| ||    || || ||||||||||| |||||||||||||||||||    
T  30613 gtttgcaatcagctagtgcatgacccttcttaccacatcggaaacatctctttacctctcctggacaagcattgctcttgtggcctttctcac 30521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 2003 - 1813
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | || |||||||| ||| |||||| || |||||||| |||||||| ||||||||||||||||| || | ||| ||||    
T  2003 aaagcaaaaactctcccagtagtctgcgccttcttacgcttcttgcattgcgaaccaatatgaccttcctcattgcagttaaaacacacaacatcgtcat 1904  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    |||| |||||||| |||| |||||| ||||| ||||| |||| |||||| ||   |||||||||||||||||||||||| |||||||||||    
T  1903 gtttacactcagcaagtgtatgacctttcttaccacaacgaagacatcttttcacatccccaggacaagcattactcttatggcctttctc 1813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 4867 - 4677
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | || |||||||| ||| |||||| || |||||||| |||||||| ||||||||||||||||| || | ||| ||||    
T  4867 aaagcaaaaactctcccagtagtctgcgccttcttacgcttcttgcattgcgaaccaatatgaccttcctcattgcagttaaaacacacaacatcgtcat 4768  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    |||| |||||||| |||| |||||| ||||| ||||| |||| |||||| ||   |||||||||||||||||||||||| |||||||||||    
T  4767 gtttacactcagcaagtgtatgacctttcttaccacaacgaagacatcttttcacatccccaggacaagcattactcttatggcctttctc 4677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 205 - 397
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| |||| |||||||||||||||||||||| |||||||||||||| |||||||| || || || || || || |||| ||    
T  205 aaagcgaaaactctaccagtagtcggcgccttcttaggctgcttgcactgagaaccaatgtgaccctcttcattacaattgaagcacacaatgtcattat 304  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||| |||||||||||| ||| | || |||||||| ||    || |  ||||||||||| |||||||||||||||||||    
T  305 gtttgcactcagctagtgaatgacccttcttaccaaatcggaaacatcttttaacctctcacggacaagcattgctcttgtggcctttctcac 397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 197 - 348
Target Start/End: Complemental strand, 18075 - 17924
Alignment:
Q  197 cttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctttccacagcga 296  Q
    ||||||||| ||||||||||||||||| |||||||| |||||  |||| |||||||||||||| |||||||| |||| ||| |||||||| ||||| |||    
T  18075 cttgcactgcgaaccaatgtgaccttcctcattgcaattaaagtatacaatatcatcatgtttacactcagcaagtgtatgtcccttcttcccacaacga 17976  T
Q  297 aaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||| ||   |||||| |||||| ||||||||||||||||||||||||    
T  17975 aaacatcttttcacatcccccggacaaacattactcttgtggcctttctcac 17924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 89 - 281
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| ||||||||||||||||| | | |||||||||| ||| |||||||| || | |||||||| ||| || || || | ||    
T  89 aaagcgaaaactctaccagtagtcggcaccttcttaggcttcgtacactgtgaactaatatgaccttcctcttcgcagttaagacacacaatgtctttat 188  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || |||||||||||||||||||||||||| ||||||||||||||||| ||    || ||  |||||||||| |||||||||||||||||||    
T  189 gcttacactcagctagtgcatgacccttcttaccacagcgaaaacatctctttacctctcccagacaagcattgctcttgtggcctttctcac 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 30452 - 30644
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| |||| |||||||||||| | | |||||||||||||| |||||||| || | |||||||||||| || || || | ||    
T  30452 aaagcgaaaactctaccagtagtcggcgccttcttaggctccgtacactgtgaaccaatatgaccttcctcttcgcagttaaaacacacaatgtccttat 30551  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || ||||||||||||| |||||||||||| ||||||||||||||||| ||    || || ||||||||||| ||||||||| |||||||||    
T  30552 gcttacactcagctagtgtatgacccttcttaccacagcgaaaacatctctttacctctcccggacaagcattgctcttgtggtctttctcac 30644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 23672 - 23480
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | || |||||||||||| ||| || || |||||||| |||||||| |||||||||||||||||||| | ||||||||    
T  23672 aaagcaaaaactctcccagtagtctgcgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgcagttaaaacatacaacatcatcat 23573  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || || || || |||| ||| || ||||| ||||| |||||||| |  ||   |||||||||||||||||||||||| |||||||||||||    
T  23572 gcttacattcggcaagtgtatgccctttcttaccacaacgaaaacaccgtttcacatccccaggacaagcattactcttatggcctttctcac 23480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 292
Target Start/End: Complemental strand, 7796 - 7660
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||| ||||| |||| |||| |||||||||||||||||||| | |||||||||||||| ||||||||||| || || || || ||||||| |     
T  7796 aaagcgaaaaccctaccagtagtcggcgccttcttaggctgcttgcaccgagaaccaatgtgaccctcttcattgcaattgaagcacacaatatcattaa 7697  T
Q  256 gtttgcactcagctagtgcatgacccttctttccaca 292  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  7696 gtttgcactcatctagtgcatgacccttcttaccaca 7660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 15575 - 15767
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | |  |||||||||||| ||| || |  |||||||| ||||||||||||||||||||||||||||| | ||| ||||    
T  15575 aaagcaaaaactcttccagtagtctgagccttcttaggcttcttacattacgaaccaatatgaccttcttcattgcagttaaaacatacaacatcgtcat 15674  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || || ||||| || | ||| |||||||| ||||| |||||||| |  ||   |||||||||||||||||||||||| |||||||||||||    
T  15675 gcttacattcagcaagagtatgccccttcttaccacaacgaaaacaccgtttcacatccccaggacaagcattactcttatggcctttctcac 15767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 216559 - 216367
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | || |||||||||||| |||||| || || ||||| |||||||||||||||||||||||||| || | ||||||||    
T  216559 aaagcaaaaactctcccagtagtctgcgccttcttaggcttcttgcattgcgacccaatatgaccttcttcattgcagttaaaacacacaacatcatcat 216460  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || || ||||  || | ||| |||||||| ||||| |||||||| |  ||   ||||| |||||||||||||||||| |||||||||||||    
T  216459 gcttacattcagtaagcgtatgccccttcttaccacaacgaaaacaccgtttcacatccctaggacaagcattactcttatggcctttctcac 216367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 36959 - 36769
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| |||| |||||||||| ||||||||||  |||||||||||||| ||||||||||| || || || || || |||| |     
T  36959 aaagcaaaaactctaccagtagtcggcgccttcttaggttgcttgcactaagaaccaatgtgaccctcttcattgcaattgaagcacacaatgtcattac 36860  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    | ||||| || || ||||||||||||||||| ||||| || |||||||| |   | || | |||||||||||| ||||| |||||||||||    
T  36859 ggttgcaatcggccagtgcatgacccttcttaccacatcggaaacatctctgtatctctctaggacaagcattgctcttatggcctttctc 36769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 26540 - 26602
Alignment:
Q  179 cggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||| |||||||| ||| ||||||| | || ||||| ||||||||||||||||| ||||||||    
T  26540 cggcgccttcttatgcttcttgcacagcgagccaatatgaccttcttcattgcaattaaaaca 26602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 348
Target Start/End: Original strand, 26676 - 26709
Alignment:
Q  315 ccaggacaagcattactcttgtggcctttctcac 348  Q
    |||| |||||||||||||||||||||||||||||    
T  26676 ccagtacaagcattactcttgtggcctttctcac 26709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 274 - 348
Target Start/End: Original strand, 17497564 - 17497638
Alignment:
Q  274 catgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17497564 catgacccttctttccacagtgaaaacatctcttggtatccccaggacaagcattactcttgtggcctttctcac 17497638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 15065826 - 15066018
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||| ||||| |||| |||| |||||||||||||||||||||| |||||||| ||||| ||||| ||||| || ||  | || ||||||| ||    
T  15065826 aaagcaaaaaccctacctgtagtcggcgccttcttaggctgcttgcactgagaaccaatatgaccctcttctttgcaattgaagaacacaatatcattat 15065925  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |||| || ||||||||||||||| ||||| || |||||||| ||    ||  | |||||| |||| |||||||||||||||||||    
T  15065926 gcttgcaatcagttaatgcatgacccttcttaccacaccggaaacatctttttacctcttctggacaaacattgctcttgtggcctttctcac 15066018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 19727515 - 19727707
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | |  |||||||||||| ||| || || |||||||| |||||||| |||||||| || |||||||| | ||||||||    
T  19727515 aaagcaaaaactcttccagtagtctgtgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgcaattgaaacatacaacatcatcat 19727614  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || || || || |||| ||| |||||||| ||||| |||||||| || ||   ||||||||||||||| |||||||| |||||||||||||    
T  19727615 gcttacattcggcaagtgtatgtcccttcttaccacaacgaaaacacctctttacatccccaggacaagcgttactcttatggcctttctcac 19727707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 225 - 348
Target Start/End: Complemental strand, 14578727 - 14578604
Alignment:
Q  225 tcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaag 324  Q
    |||||||| || || |||||||||||||||||||| |||||||| |||| |||||| ||||| ||||| || ||||| || ||   ||||||||||||||    
T  14578727 tcattgcaattgaagcatactatatcatcatgtttacactcagcaagtgtatgacctttcttaccacaacggaaacacctcttcacatccccaggacaag 14578628  T
Q  325 cattactcttgtggcctttctcac 348  Q
    ||||||||||||||||||||||||    
T  14578627 cattactcttgtggcctttctcac 14578604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 23079392 - 23079200
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||||||||| |||| |||| ||||||||||||   | |||||||||||||| ||||||| ||| ||  |  ||||||| || || || | ||    
T  23079392 aaagcgaaaactctaccagtagtcggcgccttcttaggctttgtacactgtgaaccaatatgaccttgttctttagaactaaaacacacaatgtccttat 23079293  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || |||||||||||||||||| ||||||| ||| ||||||||||||| ||    ||||| |||||| |||| |||||||||||||||||||    
T  23079292 gcttacactcagctagtgcatgaaccttcttaccatagcgaaaacatctctttacctcccccggacaaacattgctcttgtggcctttctcac 23079200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 48626798 - 48626917
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    ||||||||||||||| ||||||||||||| || ||  ||||||||||| |||||||||| ||||||  |||||||||| ||||||| |||||||| |||     
T  48626798 taggaggctcggttctctatttaaaataggccttcaataaaataaaaacgcaatttttt-tgtgtagttaaactttataaaaaaattagaatcagaagag 48626896  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  48626897 cttctaaacatgaaacgaaat 48626917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 185 - 348
Target Start/End: Complemental strand, 12843449 - 12843286
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttc 284  Q
    ||||||||| | |||||| || |||||||| ||||||||||||||||| |||||  | || | |||||||| ||| |||||||| |||| ||| || |||    
T  12843449 cttcttaggattcttgcattgcgaaccaatatgaccttcttcattgcaattaaagaacacaacatcatcatctttacactcagcaagtgtatgccctttc 12843350  T
Q  285 tttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    || ||||| || ||||| |  ||   ||| ||||||||||||||||||||||||||||||||||    
T  12843349 ttaccacaacggaaacaccgtttcacatctccaggacaagcattactcttgtggcctttctcac 12843286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 15262385 - 15262577
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | || |||| ||||||| |||||| || || ||||| || ||||| |||||||| || ||||| || | ||||||||    
T  15262385 aaagcaaaaactctcccagtagtctgcgcctttttaggcttcttgcattgcgacccaatatgtccttcctcattgcaattgaaacacacaacatcatcat 15262484  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || |||||||| |||| ||| || ||||| ||||| || ||||| |  ||   |||||||||||||||||||||||| | |||||||||||    
T  15262485 gcttacactcagcaagtgtatgccctttcttaccacaacggaaacaccgtttcacatccccaggacaagcattactcttatagcctttctcac 15262577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 7767361 - 7767248
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||||||  | |||||||||| |||  | ||| ||||||| ||| ||||||||||||| |||| ||| |||||||| |||||||||| ||||    
T  7767361 taggaggctcggttctatttttaaaataggcccaag-taagataaaaacgcatttttttgtgtgtagctaagcttcattaaaaagtcagaatcagaagaa 7767263  T
Q  120 cttctaaacatgaaa 134  Q
    ||| |||||||||||    
T  7767262 cttttaaacatgaaa 7767248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 346
Target Start/End: Original strand, 12501719 - 12501878
Alignment:
Q  187 tcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctt 286  Q
    |||| |||||||||||||| |||||||| |  || ||||| ||||| || ||||| || |||||| |||| ||||| ||||||| ||  |||||||||||    
T  12501719 tcttcggctgcttgcactgagaaccaatatttccctcttccttgcaattgaaacacacaatatcaccatgcttgcaatcagctaatgtgtgacccttctt 12501818  T
Q  287 tccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
     ||||| || |||||| | ||    ||| |||||||| |||| |||||||||||||||||    
T  12501819 gccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctc 12501878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 46905002 - 46904924
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    ||||||||||||| ||||||||| |||||| | || ||| |||||||||||||||| || ||||||| |||||||||||    
T  46905002 gtaaaataaaaattcaattttttatgtgtagcgaagcttcattaaaaaatcagaataagaagaacttttaaacatgaaa 46904924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 3688698 - 3688890
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||| || ||||| |||| ||||||| ||||||||||  | ||||| |||| ||||||||||||| ||||||||||||| || || || ||  ||     
T  3688698 aaagcaaagaccctaccagtagtcggcaccctcttaggctgagtacactgagaactaatgtgaccttctccattgcagttaaagcacacaatgtctgcac 3688797  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || || |||||||   ||||||||||||| ||||| || | |||  | ||| | ||| ||| ||| || || |||||||||||||||||||    
T  3688798 gattacaatcagctacgacatgacccttcttaccacaccggacacacttcttgatttcctcagaacaggcgttgctcttgtggcctttctcac 3688890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 346
Target Start/End: Complemental strand, 23415163 - 23414975
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  |||||| |||||||||||||||| || |||||||| ||||| ||||| ||||| || || || || |||||||   |     
T  23415163 agcaaaaactcgacccgtagtaggcaccctcttaggctgcttgcattgggaaccaatatgaccctcttcgttgcaattgaagcacacaatatcatttcgc 23415064  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||| |||||||    ||||||||||||  |||| || | |||| | ||| | ||   ||||||| ||||||||||||||||||||||    
T  23415063 ttgcaatcagctacaatatgacccttcttgtcacaccggacacatttcttgatctctttaggacaaacattactcttgtggcctttctc 23414975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 140
Target Start/End: Original strand, 43905622 - 43905741
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||  || ||||||||||||||||| |  ||||||||||| |||||||||| |||||   ||| ||||| |||||||  |||||||  |||     
T  43905622 taggaggctcgactctctatttaaaatagacccccaataaaataaaaacgcaatttttt-tgtgttgttaagctttactaaaaaaatagaatcataagag 43905720  T
Q  120 cttctaaacatgaaaggaaat 140  Q
    ||||||||||||||| |||||    
T  43905721 cttctaaacatgaaacgaaat 43905741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 348
Target Start/End: Original strand, 11861121 - 11861300
Alignment:
Q  169 taccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagc 268  Q
    |||| |||| |||| || ||||||||||||||||||| |||||||| ||||| ||||| ||| | || || || || ||||||  ||| ||||| |||||    
T  11861121 taccagtagtcggcgccctcttaggctgcttgcactgagaaccaatatgaccctcttccttggaattgaagcacacaatatcactatgcttgcaatcagc 11861220  T
Q  269 tagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||  | |||||||||||| ||||| |  |||||| | ||    ||| | |||||| |||| |||||||||||||||||||    
T  11861221 taaagtatgacccttcttaccacaccagaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcac 11861300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 139
Target Start/End: Complemental strand, 15998552 - 15998459
Alignment:
Q  41 taaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaaggaaa 139  Q
    |||||||| | ||| |||||||||||| |||||| ||| ||||||||||||||| ||||||||     |||||  ||||||||||||||||||| ||||    
T  15998552 taaaataggctctcagtaaaataaaaacgcaattatttttgtgtaactaaacttcattaaaaa-----aatcataagaacttctaaacatgaaacgaaa 15998459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 135
Target Start/End: Original strand, 25598851 - 25598966
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaa--aatcagaatcagtag 117  Q
    |||||||||||| || || ||||||||||  | |  |||||||||||  | |||||||| |||||| |||||||| |||||||  |||||||||||| ||    
T  25598851 taggaggctcggctctctttttaaaataggtctttagtaaaataaaac-gtaatttttt-tgtgtagctaaacttcattaaaaaaaatcagaatcagaag 25598948  T
Q  118 aacttctaaacatgaaag 135  Q
    ||||||||||||||||||    
T  25598949 aacttctaaacatgaaag 25598966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 15713431 - 15713346
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| || |||||||||   | |||||||||| ||||||||| ||| ||||||||||||||||    
T  15713431 aaagcaaagactctaccagtagtcggcgccctcttaggctaagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 15713346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 21596592 - 21596516
Alignment:
Q  57 taaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    ||||||||||||| |||||||| | | || |||| ||| ||||||||||||||||||  |||||||||||||||||||    
T  21596592 taaaataaaaatgtaatttttttt-tatagctaagcttcattaaaaaatcagaatcaaaagaacttctaaacatgaaa 21596516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 24185945 - 24186030
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||||| ||||| |||| |||| || ||||||||||  | |||||||||| ||| || || ||||||||||||||||||||    
T  24185945 aaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatatgtccctcttcattgcagttaaaaca 24186030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 28132503 - 28132623
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaa--aatcagaatcagtag 117  Q
    |||||||||||| || || |||||||||| |||   |||||||||||    | |||||| |||||| ||||| || |||||||  ||||| |||||| ||    
T  28132503 taggaggctcggctctctttttaaaataggcccctagtaaaataaaatataatttttttttgtgtagctaaatttcattaaaagaaatcaaaatcagaag 28132602  T
Q  118 aacttctaaacatgaaaggaa 138  Q
    |||||||||||||||||||||    
T  28132603 aacttctaaacatgaaaggaa 28132623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 27110639 - 27110759
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaa---atcagaatcagta 116  Q
    |||||||||||  || || ||||||||||||||   |||||||||||  | |||||||| |||||| ||||| || ||||||||   ||||||||||  |    
T  27110639 taggaggctcgactctctttttaaaatagacccgtagtaaaataaaac-gtaattttttttgtgtagctaaatttcattaaaaataaatcagaatcataa 27110737  T
Q  117 gaacttctaaacatgaaaggaa 138  Q
    ||| ||||||||||||||||||    
T  27110738 gaagttctaaacatgaaaggaa 27110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 140
Target Start/End: Original strand, 1649612 - 1649729
Alignment:
Q  22 ggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaact 121  Q
    |||||||||| || |||||||||||||  || | ||||||||||||  |||||| || |||||| | || ||| ||||||||||| || | |  ||||||    
T  1649612 ggaggctcggctctctatttaaaatagttccccagtaaaataaaaacacaatttgtt-tgtgtaccgaagcttcattaaaaaatcggagttataagaact 1649710  T
Q  122 tctaaacatgaaaggaaat 140  Q
    ||||||||||||| |||||    
T  1649711 tctaaacatgaaacgaaat 1649729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 14873943 - 14873885
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaat 214  Q
    ||||| |||||||||||  ||| |||| |||||||||||||||||||||| ||||||||    
T  14873943 aaagcgaaaactctaccaatagtcggcgccttcttaggctgcttgcactgagaaccaat 14873885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 238
Target Start/End: Original strand, 16638528 - 16638610
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaa 238  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | |||||||||| ||||||||||||| | ||||| |||||    
T  16638528 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccttctccgttgcaattaaa 16638610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 348
Target Start/End: Complemental strand, 16804320 - 16804130
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  |||  |||||||||||||||||| || |||||||| ||||| ||||||||  | || || || || |||||||   |     
T  16804320 agcaaaaactcgacccgtagtaggcgacttcttaggctgcttgcattgggaaccaatatgaccctcttcattaaaattgaagcacacaatatcatttcgc 16804221  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| |||||||    |||||| ||||| ||||| || | |||| | ||| | ||  |||||||| |||| |||||||||||||||||||    
T  16804220 ttgcaatcagctacaatatgacctttcttgccacaccggacacatttcttgatctcttcaggacaaacattgctcttgtggcctttctcac 16804130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 12508883 - 12508822
Alignment:
Q  201 cactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    ||||| |||||||||||||||||||||   ||||||||||| |||||||| ||||| |||||    
T  12508883 cactgagaaccaatgtgaccttcttcaccacagttaaaacaaactatatcctcatgcttgca 12508822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 15358838 - 15358923
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| |||| || ||||||||||  | |||| ||||| ||||||||| ||| ||||||||||||||||    
T  15358838 aaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactatgaactaatgtgaccctctccattgcagttaaaaca 15358923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 27303447 - 27303367
Alignment:
Q  56 gtaaaataaaaatgcaattttttgtgtgtaac--taaactttattaaaaaatcagaatcagtagaacttctaaacatgaaa 134  Q
    ||||||||||||||| ||||||| | ||||    ||| ||| ||||||||||||||||||| ||||||| |||||||||||    
T  27303447 gtaaaataaaaatgcgattttttttttgtatagttaagcttcattaaaaaatcagaatcagaagaacttttaaacatgaaa 27303367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 2247190 - 2247138
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagtta 236  Q
    |||||||||||| ||||||||| |||| ||| |||||||||||||| ||||||    
T  2247190 ccttcttaggcttcttgcactgcgaactaatatgaccttcttcattacagtta 2247138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 19965698 - 19965766
Alignment:
Q  73 ttttttgtgtgtaactaaactttattaaaaa-atcagaatcagtagaacttctaaacatgaaaggaaat 140  Q
    ||||||||||||| ||   ||| |||||||| |||| |||||| |||||||||||||||||||||||||    
T  19965698 ttttttgtgtgtagctttgcttcattaaaaatatcaaaatcagaagaacttctaaacatgaaaggaaat 19965766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 51939403 - 51939442
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  51939403 aaaaaatcagaatgagaagaacttctaaacatgaaaggaa 51939442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 52654970 - 52655009
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  52654970 aaaaaattagaatcagaagaacttctaaacatgaaaggaa 52655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 13401753 - 13401637
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaaaaatcagaatcagtagaa 119  Q
    |||||||||||  || || ||||||||||  |||  ||||||||||| || || ||||| ||||||  ||||||| |||||||||    |||||| ||||    
T  13401753 taggaggctcgactctctttttaaaataggtccttagtaaaataaaa-tgtaacttttt-tgtgtagttaaacttcattaaaaaaatgaaatcagaagaa 13401656  T
Q  120 cttctaaacatgaaaggaa 138  Q
    |||||||||||||||||||    
T  13401655 cttctaaacatgaaaggaa 13401637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 14873858 - 14873768
Alignment:
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| || |||| ||||||||||||||| ||||| |  |||||||| ||    || |||||||||||||| ||||| |||||||||||||    
T  14873858 ttgcaatcggctaatgcatgacccttcttaccacatccgaaacatctttttacctctccaggacaagcattgctcttatggcctttctcac 14873768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 138
Target Start/End: Complemental strand, 6715734 - 6715616
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttatt--aaaaaatcagaatcagtag 117  Q
    |||||||||||| || || ||||||||||| |||  ||||||| |||| | |||||||| |||||| ||||| || |||  |||||||||||| ||| ||    
T  6715734 taggaggctcggctctctttttaaaatagatccttagtaaaat-aaaacgtaatttttt-tgtgtagctaaatttcattaaaaaaaatcagaagcagaag 6715637  T
Q  118 aacttctaaacatgaaaggaa 138  Q
    ||  |||||||||| ||||||    
T  6715636 aagatctaaacatggaaggaa 6715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 15399892 - 15399808
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| |||| || ||||||||||  | |||||||||| | ||||||| ||| ||||||||||||||||    
T  15399892 aaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaacta-tgtgaccctctccattgcagttaaaaca 15399808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 13028692 - 13028620
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatg 256  Q
    |||||||||||| ||||||||| |||| ||| || ||||| || |||||||| ||||| || ||||| |||||    
T  13028692 ccttcttaggcttcttgcactgcgaactaatatgtccttcctctttgcagttgaaacacacaatatcctcatg 13028620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 29387601 - 29387637
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaag 135  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  29387601 aaaaaatcagaatcagaagaacttataaacatgaaag 29387637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 69560 - 69369
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||| ||||| ||||| |||| ||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||| || || || || |||| || ||    
T  69560 aaagccaaaaccctaccagtagtcggcaccttcttaggctacttgcactgagaaccaatgtgaccctcttctttgcaattgaagcacacaatat-attat 69462  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| ||||||| ||||||||||||||| |||||  | |||||||| ||    ||  | ||||||||||| |||||||||||||||||||    
T  69461 gcttgcaatcagctaatgcatgacccttcttaccacactggaaacatctttttacctcttccggacaagcattgctcttgtggcctttctcac 69369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 239 - 348
Target Start/End: Original strand, 9867 - 9976
Alignment:
Q  239 acatactatatcatcatgtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtgg 338  Q
    |||||| ||||||||||| || || |||||||||| |||||| ||||| ||||||||||||||||| ||   |||||||||||||||||||||||| |||    
T  9867 acatacaatatcatcatgcttacattcagctagtgtatgacctttcttaccacagcgaaaacatcttttcacatccccaggacaagcattactcttatgg 9966  T
Q  339 cctttctcac 348  Q
    ||||||||||    
T  9967 cctttctcac 9976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 7822 - 7911
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatact 245  Q
    ||||||||||||||||  |||| | |  |||||||||||| ||||||||| ||||||||||||||||| |||||||| ||||| ||||||    
T  7822 aaagcaaaaactctactagtagtctgtgccttcttaggcttcttgcactgcgaaccaatgtgaccttcctcattgcaattaaagcatact 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 10297 - 10105
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| |||| || ||||||||||||||||||| |||||||||||||| ||||| ||||| || || || || ||||||  ||    
T  10297 aaagcaaaaactctaccagtagtcggcgccctcttaggctgcttgcactgagaaccaatgtgaccctcttccttgcaattgaagcacacaatatcactat 10198  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || || ||||||| || |||||||||||| ||||| || |||||| | ||    ||| |  ||||| |||| |||||||||||||||||||    
T  10197 gcttacaatcagctaatgtatgacccttcttgccacaccggaaacatttctttacctcctctagacaaacattgctcttgtggcctttctcac 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 332
Target Start/End: Complemental strand, 14405 - 14228
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | ||||||||||||||| ||| || || |||||||| ||||||||||||||||| || |||||||| | ||||||||    
T  14405 aaagcaaaaactctcccagtagtctgcaccttcttaggcttcttacattgcgaaccaatatgaccttcttcattgcaattgaaacatacaacatcatcat 14306  T
Q  256 gtttgcactcagctagtgcatg-acccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactc 332  Q
    | || || ||||| || | |||  |||||||| ||||| |||||||| |  ||   ||||||||||||||||||||||    
T  14305 gcttacattcagcaagagtatgcccccttcttaccacaacgaaaacaccgtttcacatccccaggacaagcattactc 14228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 348
Target Start/End: Original strand, 104420 - 104583
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgaccctt 283  Q
    |||||||||||| |||||| || ||  ||||||||||||| |||||||| || |||||  | |||||||||||||| |||||||| |||| ||| || ||    
T  104420 ccttcttaggcttcttgcattgcgactcaatgtgaccttcctcattgcaattgaaacacgcaatatcatcatgtttacactcagcaagtgtatgcccttt 104519  T
Q  284 ctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||||||| ||||| ||||| ||    || ||| |||||| |||||||||||||||||||||||    
T  104520 ctttccacaacgaaagcatcttttcacgtctccaagacaag-attactcttgtggcctttctcac 104583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 185 - 348
Target Start/End: Original strand, 5109 - 5272
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttc 284  Q
    ||||||||| | |||||| || || ||||| ||||||||||||||||| || |||||||| | ||||||||| || || ||||| || | ||| ||||||    
T  5109 cttcttaggtttcttgcattgcgacccaatatgaccttcttcattgcaatttaaacatacaacatcatcatgcttacattcagcaagagtatggcccttc 5208  T
Q  285 tttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    || |||||  ||||||| |  ||   |||||||||||||||||||||||| |||||||||||||    
T  5209 ttaccacaatgaaaacaccgtttcacatccccaggacaagcattactcttatggcctttctcac 5272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 346
Target Start/End: Original strand, 14591 - 14779
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||| ||||||||||| || |||||||| ||||| |||||||| || || || ||||| ||||||| | |     
T  14591 agcaaaaactcgacccgtagtaggcgccctcttcggctgcttgcattgggaaccaatatgaccctcttcattacaattgaagcatacgatatcattacgc 14690  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||| |||||||    ||||| |||||| ||||| || | |||| | ||| | ||  || ||||| |||||||||||||||| |||||    
T  14691 ttgcaatcagctacaatatgactcttcttgccacaccggacacatttcttgatctcttcaagacaaacattactcttgtggccattctc 14779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 347
Target Start/End: Original strand, 6307 - 6469
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttc 284  Q
    ||||||||| | |||||| || || ||||| ||||||||||||||||||||||||||||| | ||||||||| || || | ||| || | ||| ||||||    
T  6307 cttcttaggtttcttgcattgcgacccaatatgaccttcttcattgcagttaaaacatacaacatcatcatgcttacatttagcaagagtatgccccttc 6406  T
Q  285 tttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctca 347  Q
    || ||||| |||||||| |  ||   ||||| | |||||||||||||||| ||||||||||||    
T  6407 ttaccacaacgaaaacaccgtttcacatccctaagacaagcattactcttatggcctttctca 6469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 140
Target Start/End: Complemental strand, 99194 - 99092
Alignment:
Q  39 tttaaaatagaccctcggtaaaataaaaatgcaattttttgtgt-gtaactaaactttattaaaaaatcagaatcagtagaacttctaaacatgaaagga 137  Q
    |||||||||| ||||| ||||||||||||||||||||||| | | ||| |||  ||| ||||||||||||||||||| ||||||||||||||||||| ||    
T  99194 tttaaaataggccctcagtaaaataaaaatgcaatttttttttttgtagctagccttcattaaaaaatcagaatcagaagaacttctaaacatgaaacga 99095  T
Q  138 aat 140  Q
    |||    
T  99094 aat 99092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 159 - 304
Target Start/End: Complemental strand, 194974 - 194829
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    |||||||||||||| |||| |||| |||||||||||||| | ||||  |||||||||||||| || | |||||| ||||| || || || |||| | |||    
T  194974 gcaaaaactctaccagtagtcggcgccttcttaggctgcgtacactacgaaccaatgtgaccctccttattgcaattaaagcacacaatgtcattacgtt 194875  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatct 304  Q
    | ||||||||||||| ||| || ||||| ||||| |||||||||||    
T  194874 tacactcagctagtgtatgtcctttcttcccacaacgaaaacatct 194829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 292
Target Start/End: Complemental strand, 17200 - 17069
Alignment:
Q  161 aaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttg 260  Q
    |||||||||||| |||| |||| || ||||||||||||| ||||| || ||||| ||||| ||||| |||||||| ||||| || |||||| |||| |||    
T  17200 aaaaactctacccgtagtcggcgccctcttaggctgcttacactgggacccaatatgaccctcttctttgcagttgaaacacacgatatcaccatgcttg 17101  T
Q  261 cactcagctagtgcatgacccttctttccaca 292  Q
    || ||||||| ||  ||||||||||| |||||    
T  17100 cagtcagctaatgtgtgacccttcttgccaca 17069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 292
Target Start/End: Original strand, 291 - 415
Alignment:
Q  168 ctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcag 267  Q
    ||||| |||| |||| |||||||||||||||||||||| |||| ||| ||||| ||||| ||||| || || || || ||||||| ||| ||||| ||||    
T  291 ctaccagtagtcggcgccttcttaggctgcttgcactgagaactaatatgaccctcttctttgcaattgaagcacacaatatcattatgcttgcaatcag 390  T
Q  268 ctagtgcatgacccttctttccaca 292  Q
    ||| ||||||||||||||| |||||    
T  391 ctaatgcatgacccttcttaccaca 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 15 - 207
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||| ||| ||||  ||| || |||||||||||||||| || |||||||| ||||| |||||||| || || || || || |||||||       
T  15 aaagcaaaaactcgacccgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattacaattgaagcacacaatatcatttc 114  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |||||||   ||||||||||||| ||||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||||||    
T  115 gcttgcaatcagctacaacatgacccttcttaccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcctttctcac 207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 348
Target Start/End: Complemental strand, 139630 - 139557
Alignment:
Q  275 atgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||| ||||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||||||    
T  139630 atgacccttcttgccacaccggacacatttcttgatctctacaggacaaacattactcttgtggcctttctcac 139557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 441817 - 441920
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| |  |||||| || |||||||||||| |||||| || |||||||| ||||| |||||||||||||||||||| || | ||||||||    
T  441817 aaagcaaaaactctccatgtagcctgcgccttcttaggcttcttgcattgcgaaccaatatgaccctcttcattgcagttaaaacacacaacatcatcat 441916  T
Q  256 gttt 259  Q
    ||||    
T  441917 gttt 441920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 496185 - 496377
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| |  |||| | || |||||||||||| ||| || ||||||||||| | |||||| |||||||||||||||||||| | ||||||||    
T  496185 aaagcaaaaactctccgagtagtctgcgccttcttaggcttcttacattgtgaaccaatataaccttcctcattgcagttaaaacatacaacatcatcat 496284  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctg-ttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || || ||||  || | ||| |||||||| ||||| ||||| || ||| ||   || ||||||||||||||| ||||| |||||||| ||||    
T  496285 gcttacattcagtaagagtatgccccttcttaccacaacgaaagca-ctgtttcacattcccaggacaagcattgctcttatggcctttttcac 496377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 344
Target Start/End: Complemental strand, 7916 - 7730
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||| ||||||||||| || |||||||||||||| |||||||| ||||| || || || ||||||| |  |    
T  7916 agcaaaaactcgacccgtagtaggcgccctcttcggctgcttgcattgggaaccaatgtgaccctcttcattacagttgaagcacacaatatcattactt 7817  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
    ||||| |||||||    |||||||||||| ||||| || | |||| | ||| | ||  |||||||| ||||||||||||||||||||    
T  7816 ttgcaatcagctataatatgacccttcttgccacaccggacacatttcttgatctcttcaggacaaacattactcttgtggcctttc 7730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 7038 - 7230
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | |  |||||||||||| ||| || || |||||||| |||||||| |||||||| || ||||| || | ||||||||    
T  7038 aaagcaaaaactctcccagtagtctgtgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgcaattgaaacacacaacatcatcat 7137  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctg-ttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || |||||||| |||| ||| || ||||| ||||| ||||| || ||| ||    |||| |||||||||||||||||| |||||||||||||    
T  7138 gcttacactcagcaagtgtatgccctttcttaccacaacgaaagca-ctgtttcacgtccctaggacaagcattactcttatggcctttctcac 7230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 14168 - 14360
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| || |||| | |  |||||||||||| ||| || || |||||||| |||||||| |||||||| || ||||| || | ||||||||    
T  14168 aaagcaaaaactctcccagtagtctgtgccttcttaggcttcttacattgcgaaccaatatgaccttcctcattgcaattgaaacacacaacatcatcat 14267  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctg-ttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | || |||||||| |||| ||| || ||||| ||||| ||||| || ||| ||    |||| |||||||||||||||||| |||||||||||||    
T  14268 gcttacactcagcaagtgtatgccctttcttaccacaacgaaagca-ctgtttcacgtccctaggacaagcattactcttatggcctttctcac 14360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 50481 - 50292
Alignment:
Q  159 gcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtt 258  Q
    ||||||||||| || |||| |||| |||| ||||||| | | || ||||||||||| ||||| |||||||| || || || || || || |||| | | |    
T  50481 gcaaaaactcttccagtagtcggcgcctttttaggcttcgtacattgtgaaccaatatgaccctcttcattacaattgaagcacacaatgtcattacgct 50382  T
Q  259 tgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | |||||||||||||  || |||||||| ||||||||||||||||| ||    || || ||||||||||| || ||||||||||||||||    
T  50381 tacactcagctagtgtgtgtcccttcttcccacagcgaaaacatctctttccctctcccggacaagcattgcttttgtggcctttctcac 50292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 348
Target Start/End: Complemental strand, 15718 - 15526
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| ||||  ||| || ||||||||||||||||||| ||||| || ||||| || |||||||| || || || || || ||||  |    
T  15718 aaagcaaaaactctaccagtagttggcgccctcttaggctgcttgcactgagaaccgatatgaccctcatcattgcaattgaagcacacaatgtcattgt 15619  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| ||||||| || |||||||||||| ||||| || |||||  | || |  ||| | ||||||  ||| |||||||||||||||||||    
T  15618 gcttgcaatcagctaatgtatgacccttcttgccacaccggaaacacttctttgcctcctctggacaaaaattgctcttgtggcctttctcac 15526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 156 - 348
Target Start/End: Original strand, 36663 - 36855
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    ||||||||||||||||| |||| |||| || |||||  ||||||||| || |||||||| ||||| ||||| ||||| ||||| || || ||||||  |     
T  36663 aaagcaaaaactctaccagtagtcggcgccctcttaaactgcttgcattgagaaccaatatgaccctcttccttgcaattaaagcacacaatatcactac 36762  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    | ||||| |||||||  | |||||||||||| ||||| || |||||| | ||    ||| | |||||| |||| |||||||||||||||||||    
T  36763 gcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacctcctctggacaaacattgctcttgtggcctttctcac 36855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 3031 - 3221
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || | |||||||||||||| || |||||||| ||||| || || ||||| ||||| || || || ||| |||||    
T  3031 agcaaaaactcgacccgtagtaggcgccctattaggctgcttgcattgggaaccaatatgaccctcctctttgcaattaaagcacacgatgtcagcatgt 3130  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| ||||||| ||  ||||||||||| ||||| || |||||  | |     ||| ||||||||||| |||||||||||||||||||||    
T  3131 ttgcaatcagctaatgtgtgacccttcttgccacaccggaaacacttctccacctcctcaggacaagcagtactcttgtggcctttctcac 3221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 156 - 346
Target Start/End: Complemental strand, 57753 - 57563
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcat 255  Q
    |||||||||||||| |  |||| | || |||||||||||| ||| || || |||||||| |||||||||||||| || || ||||| || |  |||||||    
T  57753 aaagcaaaaactctcctagtagtctgcgccttcttaggcttcttacattgcgaaccaatatgaccttcttcattacaattgaaacacacaacgtcatcat 57654  T
Q  256 gtttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    | || |||||||| |||  ||| || ||||| ||||| ||||| || |  ||   ||||| |||||||||||||||||| |||||||||||    
T  57653 gcttacactcagcaagtctatgccctttcttaccacaacgaaagcaccgtttcacatcccaaggacaagcattactcttatggcctttctc 57563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 241
Target Start/End: Complemental strand, 23437 - 23352
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||||||||| || |||| | || |||||||||||| |||||| || |||||||||||||| ||||| ||||||||||||||    
T  23437 aaagcaaaaactctcccagtagtctgcgccttcttaggcttcttgcattgcgaaccaatgtgaccctcttcgttgcagttaaaaca 23352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 9462 - 9405
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||||||| |||||| ||||||||||| |||||||| |||||||||||||||||    
T  9462 ccttcttaggcttcttgcattgtgaaccaatatgaccttcctcattgcagttaaaaca 9405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 292
Target Start/End: Original strand, 424468 - 424609
Alignment:
Q  151 aagtgaaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatc 250  Q
    |||| ||||||||||| ||||| |||| |||| || ||||||||||  | ||||||||||  |||||||| |||||||||||||||||||| || || ||    
T  424468 aagtcaaagcaaaaaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactgatgtgaccctcttcattgcagttaaaacacacaatgtc 424567  T
Q  251 atcatgtttgcactcagctagtgcatgacccttctttccaca 292  Q
     ||| | ||||| |||||||    |||||||||||| |||||    
T  424568 ctcacgcttgcaatcagctacaatatgacccttcttgccaca 424609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 344
Target Start/End: Original strand, 46 - 232
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| |||  |||  ||| || ||||||||||| |||| || |||||||||||||| |||||||| ||||| || || || ||||||| | |     
T  46 agcaaaaactcgacccatagtaggcgccctcttaggctgcgtgcattgcgaaccaatgtgaccctcttcattacagttgaagcacacaatatcattacgc 145  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
    ||||| |||||||    |||||||||||| ||||| |  | |||| | ||| | ||  |||||||| ||||||||||||||||||||    
T  146 ttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttc 232  T

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Target: scaffold0109 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 344
Target Start/End: Complemental strand, 13261 - 13075
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| |||  |||  ||| || ||||||||||| |||| || |||||||||||||| |||||||| ||||| || || || ||||||| | |     
T  13261 agcaaaaactcgacccatagtaggcgccctcttaggctgcgtgcattgcgaaccaatgtgaccctcttcattacagttgaagcacacaatatcattacgc 13162  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttc 344  Q
    ||||| |||||||    |||||||||||| ||||| |  | |||| | ||| | ||  |||||||| ||||||||||||||||||||    
T  13161 ttgcaatcagctacaatatgacccttcttaccacaccagacacatttcttgatctcttcaggacaaacattactcttgtggcctttc 13075  T

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Target: scaffold0109; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 41320 - 41405
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  41320 aaagcaaagaccctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 41405  T

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Target: scaffold0789 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0789
Description:

Target: scaffold0789; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 103 - 188
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| |||||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  103 aaagcaaagactctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 188  T

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Target: scaffold0529 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 5281 - 5441
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgaccctt 283  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||||||| || ||||| || | ||||||||| || || || |  |  | ||| || ||    
T  5281 ccttcttaggcttcttgcactgcgaaccaatatgaccttcttcattgcatttgaaacacaccacatcatcatgcttacattctgtaatagtatgcccttt 5380  T
Q  284 ctttccacagcgaaaacatctg-ttggtatccccaggacaagcattactcttgtggcctttc 344  Q
    ||| ||||| || ||||| ||| ||   |||||||| |||||||||||||||||||||||||    
T  5381 cttaccacaacggaaaca-ctgtttcacatccccagtacaagcattactcttgtggcctttc 5441  T

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Target: scaffold0177 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 348
Target Start/End: Complemental strand, 11464 - 11303
Alignment:
Q  187 tcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctt 286  Q
    |||||||||||||||| || |||||||| ||||| ||||||||||| || || || || ||||||| | | ||||| ||||||| |  ||||||||||||    
T  11464 tcttaggctgcttgcattgggaaccaatatgaccctcttcattgcaattgaatcacacaatatcattacgcttgcaatcagctactatatgacccttctt 11365  T
Q  287 tccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
     ||||| || | |||| | ||  | ||  | |||||| |||| |||||||||||||||||||    
T  11364 gccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcac 11303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 187 - 348
Target Start/End: Complemental strand, 15149 - 14988
Alignment:
Q  187 tcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctt 286  Q
    |||||||||||||||| || |||||||| ||||| ||||||||||| || || || || ||||||| | | ||||| ||||||| |  ||||||||||||    
T  15149 tcttaggctgcttgcattgggaaccaatatgaccctcttcattgcaattgaatcacacaatatcattacgcttgcaatcagctactatatgacccttctt 15050  T
Q  287 tccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
     ||||| || | |||| | ||  | ||  | |||||| |||| |||||||||||||||||||    
T  15049 gccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcac 14988  T

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Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 11634 - 11719
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    |||||||| || ||||| |||| ||||||| ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  11634 aaagcaaagaccctaccagtagtcggcaccctcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 11719  T

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Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 128601 - 128649
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgca 232  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  128601 ccttcttaggctccttgcactgcgaaccaatgtgtccttcttcattgca 128649  T

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Target: scaffold0028; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 21193 - 21247
Alignment:
Q  187 tcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||||||||  | |||||||||| ||||||||| ||| ||||||||||||||||    
T  21193 tcttaggctgagtacactgtgaactaatgtgaccctctccattgcagttaaaaca 21247  T

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Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 55169 - 55257
Alignment:
Q  156 aaagcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatac 244  Q
    |||||||| || ||||| ||||  ||| || ||||||||||  | ||||| |||| ||| || || |||||||||||||||||||||||    
T  55169 aaagcaaagaccctaccagtagttggcgccctcttaggctgagtacactgagaactaatatgtccctcttcattgcagttaaaacatac 55257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 346
Target Start/End: Complemental strand, 29065 - 28877
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||| || |||||||| || |||||||| ||||| ||| | |||||||| |||||  | |||||| ||||     
T  29065 agcaaaaactcgacccgtagtaggcgccctctttggttgcttgcattgggaaccaatatgaccctctactttgcagttgaaacacgcaatatcaccatgc 28966  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctc 346  Q
    ||||| ||||||| ||  ||||||||||| ||||| || |||||| | ||    |||  ||||||| |||| |||||||||||||||||    
T  28965 ttgcattcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctc 28877  T

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Target: scaffold0181; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 16902 - 17020
Alignment:
Q  20 taggaggctcggttccctatttaaaatagaccctcggtaaaataaaaatgcaattttttgtgtgtaactaaactttattaaa--aaatcagaatcagtag 117  Q
    |||||||||||| || || |||||||||| |||    ||||||||||  | |||||||| |||||| ||||| || ||||||  ||||||||||| | ||    
T  16902 taggaggctcggctctctttttaaaataggcccctaataaaataaaac-gtaatttttt-tgtgtagctaaatttcattaaataaaatcagaatctgaag 16999  T
Q  118 aacttctaaacatgaaaggaa 138  Q
    || ||||||||||||||||||    
T  17000 aagttctaaacatgaaaggaa 17020  T

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Target: scaffold0100 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 265
Target Start/End: Complemental strand, 16719 - 16639
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactc 265  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||  |||| ||||| |  ||||||||||  ||||||||    
T  16719 cttcttaggcttcttgcactgcgaaccaatgtgaccttcttcattatagttgaaacacatcatatcatcattcttgcactc 16639  T

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Target: scaffold0100; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 348
Target Start/End: Complemental strand, 16589 - 16556
Alignment:
Q  315 ccaggacaagcattactcttgtggcctttctcac 348  Q
    |||||||||||||||||||||||||| |||||||    
T  16589 ccaggacaagcattactcttgtggcccttctcac 16556  T

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Target: scaffold0035 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 22626 - 22692
Alignment:
Q  74 tttttgtgtgtaactaaactttattaaaa--aatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    ||||| |||||| ||||| ||||||||||  |||||||||||| |||||||||||||||||||||||    
T  22626 tttttttgtgtagctaaattttattaaaaaaaatcagaatcagaagaacttctaaacatgaaaggaa 22692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 308 - 498
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| | ||  ||| ||||||||||||||||||| || |||||||| ||||| || || ||||| ||||| || || || ||| ||||     
T  308 agcaaaaactcgacccgcagtaggcgccttcttaggctgcttgcattgggaaccaatatgaccctcctctttgcaattaaagcacacgatgtcagcatgc 407  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| ||| ||| ||  ||||||||||| ||||| || |||||    ||    ||| || |||||||| |||||||||||||||||||||    
T  408 ttgcaatcaactaatgtgtgacccttcttgccacaccggaaacactccttcacctcctcacgacaagcagtactcttgtggcctttctcac 498  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 348
Target Start/End: Original strand, 171285 - 171475
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||| ||| ||||  ||| || |||| |||||| |||| || ||||| || ||||| |||||||| ||||| || ||  | ||||||| | |     
T  171285 agcaaaaactcgacccgtagtaggcgccctcttcggctgcgtgcattgggaaccgatatgaccctcttcattacagttgaagcacgcaatatcattacgc 171384  T
Q  258 ttgcactcagctagtgcatgacccttctttccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    ||||| |||||||    |||||| ||||| ||||| |||| |||| | ||| | ||  |||||||| ||||||||||||||||||||||||    
T  171385 ttgcaatcagctacaatatgacctttcttgccacaccgaacacatttcttgatctctacaggacaaacattactcttgtggcctttctcac 171475  T

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Target: scaffold0282 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 348
Target Start/End: Complemental strand, 13589 - 13421
Alignment:
Q  185 cttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttc 284  Q
    ||||||||| | |||||| ||||| ||||| ||||||||||||||||| || ||||| || | |||||||||  | || ||| | || | ||| ||||||    
T  13589 cttcttaggtttcttgcattgtgacccaatatgaccttcttcattgcaattgaaacacaccacatcatcatgcatacattcaacaagagtatgccccttc 13490  T
Q  285 tttccacagcgaaaa-----catctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
    || ||||| ||||||     || |  ||   |||||||||||||||||||||||| |||||||||||||    
T  13489 ttaccacaacgaaaattaaacaccgtttcacatccccaggacaagcattactcttatggcctttctcac 13421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 36024 - 36075
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagtt 235  Q
    |||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  36024 ccttcttaggctccttgcactgcgaaccaatgtgtccctcttcattgcagtt 36075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 1134 - 1056
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    |||||||||||| ||||||||| |||| ||| ||||||||||| || |||||| | || |||| ||||||||| |||||    
T  1134 ccttcttaggcttcttgcactgcgaactaatatgaccttcttccttacagttatagcaaactacatcatcatgattgca 1056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 292
Target Start/End: Complemental strand, 14169 - 14035
Alignment:
Q  158 agcaaaaactctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgt 257  Q
    ||||||||||  ||| ||||  ||| || |||||||||||||||| || |||||||| ||||| ||||||||||| || || || || ||||||| | |     
T  14169 agcaaaaacttgacctgtagtaggcgccctcttaggctgcttgcattgggaaccaatatgaccctcttcattgcaattgaagcacacaatatcattacgc 14070  T
Q  258 ttgcactcagctagtgcatgacccttctttccaca 292  Q
    ||||| ||||||| |  | |||||||||| |||||    
T  14069 ttgcaatcagctactatacgacccttcttgccaca 14035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 348
Target Start/End: Complemental strand, 229960 - 229799
Alignment:
Q  187 tcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcagctagtgcatgacccttctt 286  Q
    |||| ||||||||||| || |||||||| ||||| ||||| ||||| || || || || ||||||| | | ||||| ||||||| |  ||||||||||||    
T  229960 tcttcggctgcttgcattgggaaccaatatgaccctcttcgttgcaattgaagcacacaatatcattaagcttgcaatcagctattatatgacccttctt 229861  T
Q  287 tccacagcgaaaacatctgttggtatccccaggacaagcattactcttgtggcctttctcac 348  Q
     ||||| || | |||| | ||  | ||  | |||||| |||| |||||||||||||||||||    
T  229860 gccacaccggacacatttctttatctcttctggacaaacattgctcttgtggcctttctcac 229799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 292
Target Start/End: Original strand, 48842 - 48966
Alignment:
Q  168 ctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgcactcag 267  Q
    ||||| |||| |||| || ||||||||||  | ||||| |||| ||| || || ||||||||||||||||||||||| || || | | | ||||| ||||    
T  48842 ctaccagtagtcggcgccctcttaggctgagtacactgagaactaatttgtccctcttcattgcagttaaaacatacaatgtcttgacgcttgcaatcag 48941  T
Q  268 ctagtgcatgacccttctttccaca 292  Q
    ||| |  |||||||||||| |||||    
T  48942 ctactatatgacccttcttgccaca 48966  T

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Target: scaffold0564 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 1278 - 1239
Alignment:
Q  99 aaaaaatcagaatcagtagaacttctaaacatgaaaggaa 138  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  1278 aaaaaatcagaatcagaagaagttctaaacatgaaaggaa 1239  T

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Target: scaffold0230 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 262
Target Start/End: Complemental strand, 18444 - 18389
Alignment:
Q  207 gaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    ||||||||||||||||||||||| ||||| ||||| || | ||||||||| |||||    
T  18444 gaaccaatgtgaccttcttcattacagttgaaacacaccacatcatcatgcttgca 18389  T

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Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 262
Target Start/End: Original strand, 25665 - 25743
Alignment:
Q  184 ccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatgtttgca 262  Q
    |||||||||||| ||||||||| |||| ||| ||||||| ||| || |||||| | || |||| ||||||||| |||||    
T  25665 ccttcttaggcttcttgcactgcgaactaatatgacctttttccttacagttatagcaaactacatcatcatgattgca 25743  T

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Target: scaffold0431 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 10545 - 10618
Alignment:
Q  168 ctaccggtagccggcaccttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagttaaaaca 241  Q
    ||||| |||| |||| || ||||||||||  | |||||||||| ||||||||| | | ||||||||||||||||    
T  10545 ctaccagtagtcggcgccctcttaggctgagtacactgtgaactaatgtgaccctttccattgcagttaaaaca 10618  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 15066 - 15018
Alignment:
Q  208 aaccaatgtgaccttcttcattgcagttaaaacatactatatcatcatg 256  Q
    ||||||||| ||| |||||||||||||||||||| || | |||||||||    
T  15066 aaccaatgtaaccctcttcattgcagttaaaacacacaacatcatcatg 15018  T

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Target: scaffold0165 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 12152 - 12204
Alignment:
Q  183 accttcttaggctgcttgcactgtgaaccaatgtgaccttcttcattgcagtt 235  Q
    ||||||||||||||| | |||||||||| ||| || ||||||||||| |||||    
T  12152 accttcttaggctgcgtacactgtgaactaatatgtccttcttcattacagtt 12204  T

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