View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9066_high_9 (Length: 214)
Name: NF9066_high_9
Description: NF9066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9066_high_9 |
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Alignment Details
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 19 - 203
Target Start/End: Original strand, 26682607 - 26682791
Alignment:
| Q |
19 |
ggaagcccgtcgtgattctgccaaacttaagaatcaagattttcttaggtaggtctatcatgcttaccaacttgactatctatttcatcaaaaggagatt |
118 |
Q |
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| T |
26682607 |
ggaagccggccgtgattctgccaaacttatgaatcaagattttcttaggtaggtctatcatgcttaccaccttgactatctattttatcaaaaggacatt |
26682706 |
T |
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| Q |
119 |
catcagctgaccacttatcaatacccaaacttccaaaaccaatatcccacatatctgacatgtcaccacttgcaacaacaccaaa |
203 |
Q |
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| T |
26682707 |
catcagctggccacctatcaatacccaaacttccaaaaccaatatcccacatatctgacatgtcaccacttgtaacaactccaaa |
26682791 |
T |
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