View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9066_low_19 (Length: 238)
Name: NF9066_low_19
Description: NF9066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9066_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 32324508 - 32324670
Alignment:
| Q |
61 |
ggtccacttggcccaaaactgtatcatacaacaaaccaaaaaagaaggaatagctagcttgagaaaaaagctatatacaaatgagaataagaagaagatg |
160 |
Q |
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| T |
32324508 |
ggtccacttggcccaaaactgtatcatacaacaaaccaaaaaagaaggaatagctagcttgagaagaaagctatatacaaatgagaataagaagaagatg |
32324607 |
T |
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| Q |
161 |
atggcatgaacagataatccaccttcccattggaatcttcatcacaccaccactagcatatct |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32324608 |
atggcatgaacagataatccaccttcccattggaatcttcatcacaccaccactagcatatct |
32324670 |
T |
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