View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9069_low_17 (Length: 230)

Name: NF9069_low_17
Description: NF9069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9069_low_17
NF9069_low_17
[»] scaffold0277 (2 HSPs)
scaffold0277 (1-230)||(13797-14027)
scaffold0277 (1-230)||(4836-5066)
[»] chr6 (62 HSPs)
chr6 (1-230)||(28780931-28781161)
chr6 (1-230)||(27604870-27605106)
chr6 (1-230)||(27611167-27611397)
chr6 (1-230)||(27725010-27725240)
chr6 (1-230)||(28786070-28786300)
chr6 (1-230)||(28792191-28792421)
chr6 (1-230)||(27229026-27229254)
chr6 (1-230)||(27698659-27698888)
chr6 (1-230)||(27718544-27718774)
chr6 (1-230)||(26802230-26802464)
chr6 (1-230)||(31284080-31284310)
chr6 (1-224)||(27678744-27678968)
chr6 (5-224)||(27338234-27338454)
chr6 (5-224)||(27398974-27399194)
chr6 (1-230)||(26655781-26656011)
chr6 (1-230)||(26761752-26761982)
chr6 (1-191)||(27593185-27593375)
chr6 (2-194)||(26622805-26622997)
chr6 (2-194)||(26728783-26728975)
chr6 (1-142)||(27531362-27531503)
chr6 (49-230)||(27427816-27427996)
chr6 (1-224)||(27706567-27706791)
chr6 (2-193)||(26861446-26861637)
chr6 (12-163)||(26884023-26884174)
chr6 (1-191)||(27677779-27677969)
chr6 (41-230)||(26823638-26823822)
chr6 (1-194)||(26646302-26646501)
chr6 (1-194)||(26752270-26752469)
chr6 (1-129)||(26055820-26055948)
chr6 (1-129)||(26075790-26075918)
chr6 (1-128)||(26635585-26635712)
chr6 (1-128)||(26741551-26741678)
chr6 (1-129)||(25481636-25481764)
chr6 (1-129)||(25579613-25579741)
chr6 (1-129)||(26048739-26048867)
chr6 (1-129)||(26069908-26070036)
chr6 (63-189)||(28098596-28098725)
chr6 (28-190)||(27665309-27665471)
chr6 (4-149)||(28234438-28234583)
chr6 (28-128)||(25071554-25071654)
chr6 (1-129)||(25538434-25538562)
chr6 (1-129)||(26142759-26142887)
chr6 (1-121)||(26959067-26959187)
chr6 (1-128)||(26848555-26848682)
chr6 (70-161)||(28325343-28325434)
chr6 (28-128)||(26974947-26975047)
chr6 (165-212)||(25481586-25481633)
chr6 (165-212)||(25538384-25538431)
chr6 (1-128)||(27214312-27214439)
chr6 (1-128)||(27234789-27234916)
chr6 (1-92)||(29825958-29826049)
chr6 (71-128)||(28226845-28226902)
chr6 (165-209)||(25579566-25579610)
chr6 (164-212)||(26055770-26055818)
chr6 (29-125)||(28242702-28242798)
chr6 (165-212)||(26048689-26048736)
chr6 (165-212)||(26069858-26069905)
chr6 (165-212)||(26075740-26075787)
chr6 (165-212)||(26142709-26142756)
chr6 (163-230)||(27531503-27531569)
chr6 (73-167)||(26342171-26342265)
chr6 (31-128)||(26949556-26949653)
[»] scaffold1254 (1 HSPs)
scaffold1254 (1-224)||(82-306)
[»] scaffold0419 (1 HSPs)
scaffold0419 (1-224)||(7323-7547)
[»] scaffold0349 (3 HSPs)
scaffold0349 (1-230)||(3587-3817)
scaffold0349 (1-230)||(14520-14749)
scaffold0349 (97-230)||(8062-8196)
[»] chr4 (8 HSPs)
chr4 (30-230)||(18699581-18699782)
chr4 (2-230)||(18731657-18731886)
chr4 (30-230)||(18655658-18655859)
chr4 (2-230)||(18679720-18679949)
chr4 (2-196)||(18724238-18724432)
chr4 (49-230)||(17989250-17989430)
chr4 (49-230)||(18073559-18073739)
chr4 (29-122)||(5091147-5091240)
[»] chr1 (3 HSPs)
chr1 (1-219)||(28164514-28164733)
chr1 (31-216)||(28127862-28128042)
chr1 (2-196)||(268510-268704)
[»] scaffold0003 (1 HSPs)
scaffold0003 (49-230)||(59367-59547)
[»] chr8 (2 HSPs)
chr8 (2-189)||(29273936-29274123)
chr8 (1-146)||(31903728-31903873)
[»] scaffold0038 (4 HSPs)
scaffold0038 (4-149)||(34599-34744)
scaffold0038 (70-161)||(116658-116749)
scaffold0038 (71-128)||(27343-27400)
scaffold0038 (29-125)||(42864-42960)
[»] scaffold0019 (1 HSPs)
scaffold0019 (48-149)||(58494-58595)
[»] chr2 (2 HSPs)
chr2 (1-128)||(17993849-17993976)
chr2 (73-119)||(3279592-3279638)


Alignment Details
Target: scaffold0277 (Bit Score: 179; Significance: 9e-97; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 13797 - 14027
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||    
T  13797 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgag 13896  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13897 tgtcagtgcccctaaaactgaggaacacttggtaagtgaatgcagaggaaaatgaagaggaagaggaaggtaattgcatagccatgataattgagagaaa 13996  T
Q  201 ttggatg-aaaaagagtttgagaatgcagaa 230  Q
    ||||||| ||||||||||||||||| |||||    
T  13997 ttggatgaaaaaagagtttgagaattcagaa 14027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 4836 - 5066
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  4836 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgag 4935  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||| |||||||| ||||||||||||||    
T  4936 tgtcaatgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattgagagaaa 5035  T
Q  201 ttggatg-aaaaagagtttgagaatgcagaa 230  Q
    ||||||| ||||||||||||||||| |||||    
T  5036 ttggatgaaaaaagagtttgagaattcagaa 5066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 9e-97; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 28781161 - 28780931
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||    
T  28781161 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgag 28781062  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28781061 tgtcagtgcccctaaaactgaggaacacttggtaagtgaatgcagaggaaaatgaagaggaagaggaaggtaattgcatagccatgataattgagagaaa 28780962  T
Q  201 ttggatga-aaaagagtttgagaatgcagaa 230  Q
    |||||||| |||||||||||||||| |||||    
T  28780961 ttggatgaaaaaagagtttgagaattcagaa 28780931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27604870 - 27605106
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||| ||||| |||| ||||||||| |||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27604870 gtgatttcatctcctcttcgaagatcattttcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtatcgag 27604969  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaa------gaggaagaggaaggtaattgcatagccatgagaattga 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||      ||||| ||||||||||||||||||||||||||||||||    
T  27604970 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaaatgaagaggatgaggatgaggaaggtaattgcatagccatgagaattga 27605069  T
Q  195 gagaaattggatg-aaaaagagtttgagaatgcagaa 230  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27605070 gagaaattggatgaaaaaagagtttgagaatgcagaa 27605106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27611167 - 27611397
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||| ||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  27611167 gtgatttcatctcctcttggaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgag 27611266  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  27611267 tgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaagaagaggaagctaattgcatagccatgaaaattgagagaaa 27611366  T
Q  201 ttggatg-aaaaagagtttgagaatgcagaa 230  Q
    ||||||| |||||||||||||||||||||||    
T  27611367 ttggatgaaaaaagagtttgagaatgcagaa 27611397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27725010 - 27725240
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  27725010 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgag 27725109  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||| |||||||||| ||||||||||||    
T  27725110 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccatgacaattgagagaaa 27725209  T
Q  201 ttggatg-aaaaagagtttgagaatgcagaa 230  Q
    | ||||| |||||||||||||||||||||||    
T  27725210 taggatgaaaaaagagtttgagaatgcagaa 27725240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 28786300 - 28786070
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  28786300 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgag 28786201  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||| |||||||| ||||||||||||||    
T  28786200 tgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattgagagaaa 28786101  T
Q  201 ttggatga-aaaagagtttgagaatgcagaa 230  Q
    |||||||| |||||||||||||||| |||||    
T  28786100 ttggatgaaaaaagagtttgagaattcagaa 28786070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 28792421 - 28792191
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  28792421 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgag 28792322  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||| |||||||| ||||||||||||||    
T  28792321 tgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattgagagaaa 28792222  T
Q  201 ttggatga-aaaagagtttgagaatgcagaa 230  Q
    |||||||| |||||||||||||||| |||||    
T  28792221 ttggatgaaaaaagagtttgagaattcagaa 28792191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 27229254 - 27229026
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||| ||||||||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||||||||| ||||||||||  ||||    
T  27229254 gtgatttcgtctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtgccgag 27229155  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||    
T  27229154 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatccaaaggaaaatgaagaggaagaggaaggtgattgtatagccatgagacttgagagaaa 27229055  T
Q  201 ttggatgaaaaagagtttgagaatgcagaa 230  Q
    ||||||| |||||||||| |||||||||||    
T  27229054 ttggatg-aaaagagttttagaatgcagaa 27229026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27698659 - 27698888
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  27698659 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgag 27698758  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||| ||| ||||||||| |||| |||||||||||||||||||||||    
T  27698759 tgtcagtgcccctaaaactgatgaacacttggtaagtgaatccataggaaaatgaagtggatgaggaaggtgattgtatagccatgagaattgagagaaa 27698858  T
Q  201 ttggatgaaaaagagtttgagaatgcagaa 230  Q
    | ||||||||||||||||||||||||||||    
T  27698859 taggatgaaaaagagtttgagaatgcagaa 27698888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 27718544 - 27718774
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| || ||||||| ||  ||||    
T  27718544 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaactgtgccgag 27718643  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| ||| | ||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  27718644 tgtcagtgcccctaaaactgaggaacacttggtaagtgaatccatgggagaatgaagaggatgaggaaggtgattgtatagccatgagaattgagagaaa 27718743  T
Q  201 ttggatg-aaaaagagtttgagaatgcagaa 230  Q
    | ||||| |||||||||||||||||||||||    
T  27718744 taggatgaaaaaagagtttgagaatgcagaa 27718774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26802464 - 26802230
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||| |||||||||||||||||||||| ||||||||||| ||||    
T  26802464 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcaataagagccttgtagagattgcccgtaaaaccgtaccgag 26802365  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| |||| ||||||||| ||||||||  | ||||||||||||| ||||| ||||||    
T  26802364 tgtcagtgcccctaaaactgaggaacacttggtaagtgaatccataagaaaatgaagaggatgaggaaggagactgcatagccatgaaaattgtgagaaa 26802265  T
Q  201 ttggatga-----aaaagagtttgagaatgcagaa 230  Q
    ||||||||     ||||||||||||||||||||||    
T  26802264 ttggatgaaaaaaaaaagagtttgagaatgcagaa 26802230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 31284310 - 31284080
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||| |||||||||||  || | ||||||||| |||||| |||||||||||||||||||||||||||||||||||| || ||||| || ||||    
T  31284310 gtgatttcatcccctctttgaagttcactatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagattgccggtgaaaccataccgag 31284211  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||| | ||||| ||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||     
T  31284210 tgtcacttcccctgaaactaaggaatacttggtatttgaatacataggaaattgaagaggaagaggaagatgattgcatagccatgagatttgagagaat 31284111  T
Q  201 ttggatgaa-aaagagtttgagaatgcagaa 230  Q
     |||||||| ||||| |||||||||||||||    
T  31284110 atggatgaagaaagaatttgagaatgcagaa 31284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 27678968 - 27678744
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||||| ||||    
T  27678968 gtgatttcatctcctctttgaagaccattcttatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattcccggtgaaaccgtaccgag 27678869  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||| | || || ||||| ||||| ||||||||  || |  ||||||||||||||| ||||||||||||| ||||||||||||||||| || |||||||    
T  27678868 tgtcacttcctctgaaactgaggaatacttggtatttgtactcataggaaattgaagtggaagaggaaggtgattgcatagccatgagattttagagaaa 27678769  T
Q  201 ttggatg-aaaaagagtttgagaat 224  Q
    || |||| |||||||||||||||||    
T  27678768 ttagatgaaaaaagagtttgagaat 27678744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 27338234 - 27338454
Alignment:
Q  5 tttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtc 104  Q
    ||||||||||||||| |||| | |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||  |||||||    
T  27338234 tttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccgtaaagagtgtc 27338333  T
Q  105 agtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattgg 204  Q
    | || |||||||||| |||||||| |||||  ||||  || ||||||||||||||||||||||| || |||||||||||||||||||||||||||||  |    
T  27338334 aatgtccctaaaactgaggaacacatggtatttgaacccagaggaaattgaagaggaagaggaaagtgattgcatagccatgagaattgagagaaataag 27338433  T
Q  205 atg-aaaaagagtttgagaat 224  Q
    ||| ||||| |||||||||||    
T  27338434 atgaaaaaaaagtttgagaat 27338454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 27398974 - 27399194
Alignment:
Q  5 tttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtc 104  Q
    ||||||||||||||| |||| | |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||  |||||||    
T  27398974 tttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccgtaaagagtgtc 27399073  T
Q  105 agtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattgg 204  Q
    | || |||||||||| |||||||| |||||  ||||  || ||||||||||||||||||||||| || |||||||||||||||||||||||||||||  |    
T  27399074 aatgtccctaaaactgaggaacacatggtatttgaacccagaggaaattgaagaggaagaggaaagtgattgcatagccatgagaattgagagaaataag 27399173  T
Q  205 atg-aaaaagagtttgagaat 224  Q
    ||| ||||| |||||||||||    
T  27399174 atgaaaaaaaagtttgagaat 27399194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26656011 - 26655781
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||  ||||| |||||||||||||| | || | ||||||||| ||| |||||||||||||||||||||| ||||||||||  || |    
T  26656011 gtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaaccgtgccggg 26655912  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||| ||||||||||||| ||||||||||||||  | ||  ||||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  26655911 tgtcaatgcccctaaaactgaggaacacttggtatttaaacccataggaaaatgaagaggatgaggaaggtgattgtatagccatgagaattgagagaaa 26655812  T
Q  201 ttggatg-aaaaagagtttgagaatgcagaa 230  Q
     |||||| |||||||||||| ||||||||||    
T  26655811 atggatgaaaaaagagtttgggaatgcagaa 26655781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 26761982 - 26761752
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||  ||||| |||||||||||||| | || | ||||||||| ||| |||||||||||||||||||||| ||||||||||  || |    
T  26761982 gtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaaccgtgccggg 26761883  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||| ||||||||||||| ||||||||||||||  | ||  ||||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  26761882 tgtcaatgcccctaaaactgaggaacacttggtatttaaacccataggaaaatgaagaggatgaggaaggtgattgtatagccatgagaattgagagaaa 26761783  T
Q  201 ttggatg-aaaaagagtttgagaatgcagaa 230  Q
     |||||| |||||||||||| ||||||||||    
T  26761782 atggatgaaaaaagagtttgggaatgcagaa 26761752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 27593185 - 27593375
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  27593185 gtgatttcatttcctctttgaagaccattgtcatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattgccggtgaaaccgtaccgag 27593284  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaat 191  Q
    ||||| | || || ||||| ||||| ||||||||  || |  ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27593285 tgtcacttcctctgaaactgaggaatacttggtatttgtaatcataggaaattgaagtggaagaggaaggtgattgcatagccatgagaat 27593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 194
Target Start/End: Complemental strand, 26622997 - 26622805
Alignment:
Q  2 tgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagt 101  Q
    ||||||| || |||||||||||  ||   ||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  26622997 tgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaaccgtaccgagt 26622898  T
Q  102 gtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattga 194  Q
    |||| |||| || ||||| ||||||||||||||  |||||  |||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  26622897 gtcactgcctctgaaacttaggaacacttggtatttgaattgataggaaattgaagaggaagaggatggtgattgcatagccatgataattga 26622805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 194
Target Start/End: Complemental strand, 26728975 - 26728783
Alignment:
Q  2 tgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagt 101  Q
    ||||||| || |||||||||||  ||   ||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  26728975 tgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaaccgtaccgagt 26728876  T
Q  102 gtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattga 194  Q
    |||| |||| || ||||| ||||||||||||||  |||||  |||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  26728875 gtcactgcctctgaaacttaggaacacttggtatttgaattgataggaaattgaagaggaagaggatggtgattgcatagccatgataattga 26728783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27531362 - 27531503
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  27531362 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatagattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgag 27531461  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatg 142  Q
    |||| | |||||||||||| ||||||||||||||||||||||    
T  27531462 tgtccgcgcccctaaaactgaggaacacttggtaagtgaatg 27531503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 49 - 230
Target Start/End: Original strand, 27427816 - 27427996
Alignment:
Q  49 attcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatagg 148  Q
    |||||||||||| ||||||||||  |||||||||| || |||||||| |||||||| |||||| || || | |||||||| | |||| ||||||||||||    
T  27427816 attcccttgtcaataagagccttcaagagattgccggtgaaaccgtaccgagtgtcggtgcccttacaaatgaggaacacatcgtaactgaatgcatagg 27427915  T
Q  149 aaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaagagtttgagaatgcagaa 230  Q
    ||| |||||||||| || ||||||||||||| |||||||||||||||||||||  |||| | ||||||||||||||||||||    
T  27427916 aaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataagatg-agaagagtttgagaatgcagaa 27427996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 27706567 - 27706791
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||| | |||||||||  |||  |  |||||| |||||| |||||||||||||  || |||||||||||||||||| || |||||||| ||||    
T  27706567 gtgatttcatcccttctttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaaaagccttgtagagattgcctgtgaaaccgtaccgag 27706666  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    |||||   || || ||||| ||||| ||||||||  || |  ||||||||||||||| ||||||| ||||| ||||||||||||||||| || |||||||    
T  27706667 tgtcacctcctctgaaactgaggaatacttggtatttgtactcataggaaattgaagtggaagagaaaggtgattgcatagccatgagattttagagaaa 27706766  T
Q  201 ttggatg-aaaaagagtttgagaat 224  Q
    || |||| |||||||||||||||||    
T  27706767 ttagatgaaaaaagagtttgagaat 27706791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 193
Target Start/End: Complemental strand, 26861637 - 26861446
Alignment:
Q  2 tgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagt 101  Q
    |||||||||| |||||||||||  ||   ||||| ||| ||||||  |||||||||||||||||||||||||||||||| || |||||||| || |||||    
T  26861637 tgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattaccggtaaaaccataccgagt 26861538  T
Q  102 gtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattg 193  Q
    |||| | || || ||||| ||||| || |||||  ||||| |||||||||| |||||||||||| ||||| ||||||||||||| |||||||    
T  26861537 gtcacttcctctgaaactgaggaatacctggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 26861446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 26884174 - 26884023
Alignment:
Q  12 tcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgccc 111  Q
    ||||||| |||||  ||| ||||||||| |||||| ||||||||||| ||||||||||||||||||||| ||||| ||||| || ||||||||| | ||     
T  26884174 tcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaaccataccgagtgtcacttcct 26884075  T
Q  112 ctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaag 163  Q
    || ||||| ||||||||||||||||||||| ||||||||| |||||||||||    
T  26884074 ctgaaactgaggaacacttggtaagtgaatccataggaaaatgaagaggaag 26884023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 27677779 - 27677969
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||| |||||||||||  |||  |  |||||| |||||| |||||||||||||  ||||||||||||||||||||| || |||||||| ||||    
T  27677779 gtgatttcatcccctctttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaagagccttgtagagattgccggtgaaaccgtaccgag 27677878  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaat 191  Q
    ||||| | || || ||| | ||||| ||||||||  || |  ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27677879 tgtcacttcctctgaaattgaggaatacttggtatttgtactcataggaaattgaagtggaagaggaaggtgattgcatagccatgagaat 27677969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 41 - 230
Target Start/End: Complemental strand, 26823822 - 26823638
Alignment:
Q  41 aggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaa 140  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||||  | || |||||||||| ||| |||||||| || |||||||||||  ||||    
T  26823822 aggtgtggattcccttgtctgtaagagccttgtagagattgccggtaaattcataccgagtgtcagcgcctctaaaactgagaaacacttggtatttgaa 26823723  T
Q  141 tgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattggatgaa-aaagagtttgagaatgcagaa 230  Q
      |||| |||| |||||||      |||| | | ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  26823722 atcatatgaaactgaagag------gaagttgactgcatagccatgagaattgagagaaattggacgaagaaagagtttgagaatgcagaa 26823638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 26646501 - 26646302
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||||||||| | |||| ||   ||||||||| ||||||  |||||||||||||||||||||||||||||||  |||||||||||||  ||||    
T  26646501 gtgatttcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaaccgtcacgag 26646402  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaaga------ggaaggtaattgcatagccatgagaattga 194  Q
    ||||| ||||||| ||  | ||||| || ||||| |||||| | ||||||||| ||||||||||      ||||||  ||||||||||||||||||||||    
T  26646401 tgtcactgcccctgaagttgaggaagacctggtaggtgaatccgtaggaaattaaagaggaagaggaataggaaggagattgcatagccatgagaattga 26646302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 26752469 - 26752270
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||||||||| | |||| ||   ||||||||| ||||||  |||||||||||||||||||||||||||||||  |||||||||||||  ||||    
T  26752469 gtgatttcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaaccgtcacgag 26752370  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaaga------ggaaggtaattgcatagccatgagaattga 194  Q
    ||||| ||||||| ||  | ||||| || ||||| |||||| | ||||||||| ||||||||||      ||||||  ||||||||||||||||||||||    
T  26752369 tgtcactgcccctgaagttgaggaagacctggtaggtgaatccgtaggaaattaaagaggaagaggaataggaaggagattgcatagccatgagaattga 26752270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26055948 - 26055820
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||| ||||||||| | || || ||||||||||||  ||||||||| |||||||| || ||||||  ||  ||||    
T  26055948 gtgatttcatctcctctttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgag 26055849  T
Q  101 tgtcagtgcccctaaaactaaggaacact 129  Q
    ||||| ||||||| ||| | |||||||||    
T  26055848 tgtcactgcccctgaaaatgaggaacact 26055820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26075918 - 26075790
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||| ||||||||| | || || ||||||||||||  ||||||||| |||||||| || ||||||  ||  ||||    
T  26075918 gtgatttcatctcctctttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgag 26075819  T
Q  101 tgtcagtgcccctaaaactaaggaacact 129  Q
    ||||| ||||||| ||| | |||||||||    
T  26075818 tgtcactgcccctgaaattgaggaacact 26075790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 26635712 - 26635585
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||| ||| ||| |||  | |||||||||||| ||||||||||||| ||||||| |||||| || ||||| || || || |||||| || |||    
T  26635712 gtgatttcatccccttttttaagctccttgtcatcaatgaaggtgttgattcctttgtcagaaagagctttatagaggttaccggtgaaaccgaattgag 26635613  T
Q  101 tgtcagtgcccctaaaactaaggaacac 128  Q
    |||| |||||||| ||||||| ||||||    
T  26635612 tgtcggtgcccctgaaactaatgaacac 26635585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 26741678 - 26741551
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||| ||| ||| |||  | |||||||||||| ||||||||||||| ||||||| |||||| || ||||| || || || |||||| || |||    
T  26741678 gtgatttcatccccttttttaagctccttgtcatcaatgaaggtgttgattcctttgtcagaaagagctttatagaggttaccggtgaaaccgaattgag 26741579  T
Q  101 tgtcagtgcccctaaaactaaggaacac 128  Q
    |||| |||||||| ||||||| ||||||    
T  26741578 tgtcggtgcccctgaaactaatgaacac 26741551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25481764 - 25481636
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||| ||||||||| | ||    ||||||||||||  ||||||||| |||||||| || ||||||  ||  ||||    
T  25481764 gtgatttcatctcctctttgaagatcattttcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgag 25481665  T
Q  101 tgtcagtgcccctaaaactaaggaacact 129  Q
    ||||| ||||||| ||| | |||||||||    
T  25481664 tgtcactgcccctgaaattgaggaacact 25481636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25579741 - 25579613
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||| ||||||| | ||||    ||||||||||||  ||||||||| |||||||| || ||||||  ||  ||||    
T  25579741 gtgatttcatctcctctttgaagatcattatcatcaaagaaggtacgaattcccttgtcaacaagagccttatagagattaccggtaaaagtgttgcgag 25579642  T
Q  101 tgtcagtgcccctaaaactaaggaacact 129  Q
    ||||| |||| || ||||| |||||||||    
T  25579641 tgtcactgcctctgaaactgaggaacact 25579613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26048867 - 26048739
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||||||||||| |||| |||| ||||||||| | ||    |||||||||||| | |||||||| |||||||| || ||||||  ||  ||||    
T  26048867 gtgatttcatctcctctttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagattaccggtaaaattgttgcgag 26048768  T
Q  101 tgtcagtgcccctaaaactaaggaacact 129  Q
    ||||| ||||||| ||||| |||||||||    
T  26048767 tgtcactgcccctgaaactgaggaacact 26048739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26070036 - 26069908
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||||||||||| |||| |||| ||||||||| | ||    |||||||||||| | |||||||| |||||||| || ||||||  ||  ||||    
T  26070036 gtgatttcatctcctctttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagattaccggtaaaattgttgcgag 26069937  T
Q  101 tgtcagtgcccctaaaactaaggaacact 129  Q
    ||||| ||||||| ||||| |||||||||    
T  26069936 tgtcactgcccctgaaactgaggaacact 26069908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 28098596 - 28098725
Alignment:
Q  63 aagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaa 162  Q
    |||||| ||||||||||| ||||||||||| || |||||||| |||||||||||| |||| ||||| |  || |||||| |||| || | ||||||| ||    
T  28098596 aagagctttgtagagatttccagtaaaaccataccgagtgtcggtgcccctaaaattaagaaacacgtcataggtgaatccataagagaatgaagagaaa 28098695  T
Q  163 gaggaaggtaatt---gcatagccatgaga 189  Q
    ||||||| | |||   ||||||||||||||    
T  28098696 gaggaagatgattggagcatagccatgaga 28098725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 28 - 190
Target Start/End: Original strand, 27665309 - 27665471
Alignment:
Q  28 ttgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaaca 127  Q
    |||||||||||| |||||| |||||| ||||||| ||||||||| ||||| || || || |||||  |||||||||| || ||||| ||||||| |||||    
T  27665309 ttgtcatcaatgaaggtgtggattcctttgtcagaaagagccttatagaggttaccggtgaaaccaaatcgagtgtcggtacccctgaaactaatgaaca 27665408  T
Q  128 cttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaa 190  Q
    | | | |  ||||  |||| || |  || ||||| || | |||||||||||||||||||||||    
T  27665409 catcgaagttgaaatcataagagagggaggaggaggaagtaggtaattgcatagccatgagaa 27665471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 28234583 - 28234438
Alignment:
Q  4 atttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgt 103  Q
    ||||||||||||| ||||||  |  ||||||||||| |||||| ||||||||||| |  ||||||  | ||||||||  | |||||||| || |||||||    
T  28234583 atttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattcccttgtgacaaagagctctatagagattttcggtaaaaccatagcgagtgt 28234484  T
Q  104 cagtgcccctaaaactaaggaacacttggtaagtgaatgcatagga 149  Q
    || | || ||||||||||||||||| |  || |||||| |||||||    
T  28234483 cactacctctaaaactaaggaacacgtcataggtgaatccatagga 28234438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 25071654 - 25071554
Alignment:
Q  28 ttgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaaca 127  Q
    |||||||||||  |||||| |||||| ||||||| |||||| || || ||||| || ||||||||| |||||||||| || ||||| ||||||| |||||    
T  25071654 ttgtcatcaataaaggtgtggattcctttgtcagaaagagctttataaagattaccggtaaaaccgaatcgagtgtcggtacccctgaaactaatgaaca 25071555  T
Q  128 c 128  Q
    |    
T  25071554 c 25071554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25538562 - 25538434
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||||||||||| |||| |||| ||||| ||| | ||  | ||||||||||||  ||||||||| |||||||| || |||||   ||  ||||    
T  25538562 gtgatttcatctcctctttcaagatcattatcatctatgaaagtactaattcccttgtcaacaagagccttatagagattaccggtaaatttgttgcgag 25538463  T
Q  101 tgtcagtgcccctaaaactaaggaacact 129  Q
    ||||| ||||||| ||||| |||||||||    
T  25538462 tgtcactgcccctgaaactgaggaacact 25538434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26142887 - 26142759
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||||||||||| |||| |||| ||||||||| | ||    ||||||||||||  ||||||||| |||||||| || |||||   ||  ||||    
T  26142887 gtgatttcatctcctctttcaagatcattatcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagattaccggtaaatttgttgcgag 26142788  T
Q  101 tgtcagtgcccctaaaactaaggaacact 129  Q
    ||||| ||||||| ||||| |||||||||    
T  26142787 tgtcactgcccctgaaactgaggaacact 26142759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 26959187 - 26959067
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||| ||| ||| |||  | |||||||||||| |||||| |||||| ||||||| |||||| || ||||| || || || |||| | ||||||    
T  26959187 gtgatttcatccccttttttaagctctttgtcatcaatgaaggtgtcgattcctttgtcagaaagagctttatagaggttaccggtgaaactgaatcgag 26959088  T
Q  101 tgtcagtgcccctaaaactaa 121  Q
    |||| |||||||| |||||||    
T  26959087 tgtcggtgcccctgaaactaa 26959067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 26848682 - 26848555
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||| ||||| || || |||||| | |||||||||||| ||||   |||||| ||||||| |||||| || |||||||| ||||| |||| | ||| ||    
T  26848682 gtgatctcatcaccactctgaagatccttgtcatcaatgaaggttcggattccattgtcagaaagagctttatagagattaccagtgaaactgaatctag 26848583  T
Q  101 tgtcagtgcccctaaaactaaggaacac 128  Q
    |||| |||||||| ||||||| ||||||    
T  26848582 tgtcggtgcccctgaaactaatgaacac 26848555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 28325434 - 28325343
Alignment:
Q  70 ttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagagga 161  Q
    ||||||||||| ||||||||||| || ||||||||| | || ||||||||||||||||| |  || |||||| |||||||||  ||||||||    
T  28325434 ttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaacacgtcataggtgaatccataggaaaaggaagagga 28325343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 26975047 - 26974947
Alignment:
Q  28 ttgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaaca 127  Q
    |||||||||||| || |||||||||| ||||||| |||||| || ||||| || || || |||||| |||||||||| || || || ||||||| |||||    
T  26975047 ttgtcatcaatgaagatgttgattcctttgtcagaaagagctttatagaggttaccggtgaaaccgaatcgagtgtcggtacctctgaaactaatgaaca 26974948  T
Q  128 c 128  Q
    |    
T  26974947 c 26974947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 25481633 - 25481586
Alignment:
Q  165 ggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaa 212  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  25481633 ggaaggtgattgcatagccatgagaattgaaagaatttggatgaaaaa 25481586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 25538431 - 25538384
Alignment:
Q  165 ggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaa 212  Q
    ||||||| |||||||||||||||||||||| |||| ||||||||||||    
T  25538431 ggaaggtgattgcatagccatgagaattgaaagaatttggatgaaaaa 25538384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27214439 - 27214312
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||| || ||||| |||||  | |||||||||||| ||||   |||||| ||||||  |||||| || |||||||| || || ||||||| |||||    
T  27214439 gtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcctttgtcacaaagagctttatagagattaccggtgaaaccgtgtcgag 27214340  T
Q  101 tgtcagtgcccctaaaactaaggaacac 128  Q
    |||| || ||||| ||||||| ||||||    
T  27214339 tgtcggtacccctgaaactaatgaacac 27214312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 27234789 - 27234916
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||| || ||||| |||||  | |||||||||||| ||||   |||||| ||||||  |||||| || |||||||| || || ||||||| |||||    
T  27234789 gtgatttcgtcacctctctgaagctccttgtcatcaatgaaggttcggattcctttgtcacaaagagctttatagagattaccggtgaaaccgtgtcgag 27234888  T
Q  101 tgtcagtgcccctaaaactaaggaacac 128  Q
    |||| || ||||| ||||||| ||||||    
T  27234889 tgtcggtacccctgaaactaatgaacac 27234916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 29826049 - 29825958
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaacc 92  Q
    |||||||| || |||||||||||  | |||||||||||| |||||   |||  ||||||||| ||||| |||||||||||||| ||||||||    
T  29826049 gtgatttcgtcccctctttgaagctctttgtcatcaatgaaggtgcgaattttcttgtcagttagagctttgtagagattgccggtaaaacc 29825958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 28226902 - 28226845
Alignment:
Q  71 tgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacac 128  Q
    |||||||||| ||||||||||| || ||||||||| | || |||||||||||||||||    
T  28226902 tgtagagatttccagtaaaaccataacgagtgtcaatacctctaaaactaaggaacac 28226845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 25579610 - 25579566
Alignment:
Q  165 ggaaggtaattgcatagccatgagaattgagagaaattggatgaa 209  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||    
T  25579610 ggaaggtgattgcatagccatgagaattgaaagaatttggatgaa 25579566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 26055818 - 26055770
Alignment:
Q  164 aggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaa 212  Q
    |||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  26055818 aggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaa 26055770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 28242798 - 28242702
Alignment:
Q  29 tgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaa 125  Q
    ||||||||||| |||||   |||||||| | |  |||| | ||||||||||| ||||||||||| || ||||||||| | || ||||||||||||||    
T  28242798 tgtcatcaatgaaggtgcgaattcccttcttacaaagatctttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaa 28242702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 26048736 - 26048689
Alignment:
Q  165 ggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaa 212  Q
    ||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  26048736 ggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaa 26048689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 26069905 - 26069858
Alignment:
Q  165 ggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaa 212  Q
    ||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  26069905 ggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaa 26069858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 26075787 - 26075740
Alignment:
Q  165 ggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaa 212  Q
    ||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  26075787 ggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaa 26075740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 26142756 - 26142709
Alignment:
Q  165 ggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaa 212  Q
    ||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  26142756 ggaaggtgattgcatagccatgagaattgaaagaatatggatgaaaaa 26142709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 27531503 - 27531569
Alignment:
Q  163 gaggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaagagtttgagaatgcagaa 230  Q
    ||||||||| ||||| |||||||||||| ||||||||| |  |||| || ||||||||||||||||||    
T  27531503 gaggaaggtgattgcgtagccatgagaactgagagaaact-tatgacaaggagtttgagaatgcagaa 27531569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 167
Target Start/End: Original strand, 26342171 - 26342265
Alignment:
Q  73 tagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagagga 167  Q
    |||| ||||||||||||||| || |||||| || ||||||||||| | |||||||| |  || |||||| |||| || | ||||||| |||||||    
T  26342171 tagatattgccagtaaaaccatagcgagtgccaatgcccctaaaattgaggaacacatcatatgtgaatccatatgagaatgaagagaaagagga 26342265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 26949653 - 26949556
Alignment:
Q  31 tcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacac 128  Q
    ||||||||| ||||   ||||||||||||||  ||||| || |||||||| || || |||||| |||||||||| || || || ||||||| ||||||    
T  26949653 tcatcaatgaaggttcggattcccttgtcagagagagctttatagagattaccggtgaaaccgaatcgagtgtcggtacctctgaaactaatgaacac 26949556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 82 - 306
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||    
T  82 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgag 181  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  182 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatatgaaaatgaagaggaagagggaggtgattgcatagccatgagaattgagagaaa 281  T
Q  201 ttggatg-aaaaagagtttgagaat 224  Q
    || |||| |||||||||||||||||    
T  282 ttagatgaaaaaagagtttgagaat 306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 7547 - 7323
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||    
T  7547 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgag 7448  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  7447 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatatgaaaatgaagaggaagagggaggtgattgcatagccatgagaattgagagaaa 7348  T
Q  201 ttggatg-aaaaagagtttgagaat 224  Q
    || |||| |||||||||||||||||    
T  7347 ttagatgaaaaaagagtttgagaat 7323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 163; Significance: 3e-87; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 3587 - 3817
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  3587 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgag 3686  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||| |||||||||| ||||||||||||    
T  3687 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccatgacaattgagagaaa 3786  T
Q  201 ttggatg-aaaaagagtttgagaatgcagaa 230  Q
    | ||||| |||||||||||||||||||||||    
T  3787 taggatgaaaaaagagtttgagaatgcagaa 3817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 14520 - 14749
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||||| || ||||||||||  ||||    
T  14520 gtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgag 14619  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||| ||| ||||||||| |||| |||||||||||||||||||||||    
T  14620 tgtcagtgcccctaaaactgatgaacacttggtaagtgaatccataggaaaatgaagtggatgaggaaggtgattgtatagccatgagaattgagagaaa 14719  T
Q  201 ttggatgaaaaagagtttgagaatgcagaa 230  Q
    | ||||||||||||||||||||||||||||    
T  14720 taggatgaaaaagagtttgagaatgcagaa 14749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 97 - 230
Target Start/End: Original strand, 8062 - 8196
Alignment:
Q  97 cgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgaga 196  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| | ||||||||| ||||||||| |||| |||||||||||||||||||    
T  8062 cgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccatgggagaatgaagaggatgaggaaggtgattgtatagccatgagaattgaga 8161  T
Q  197 gaaattggatg-aaaaagagtttgagaatgcagaa 230  Q
    ||||| ||||| |||||||||||||||||||||||    
T  8162 gaaataggatgaaaaaagagtttgagaatgcagaa 8196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 30 - 230
Target Start/End: Original strand, 18699581 - 18699782
Alignment:
Q  30 gtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacact 129  Q
    |||||||||| |||||| ||||||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||||||| || || |||||||||    
T  18699581 gtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatggccagtaaaaccgtcacgagtgtcagtgcccctgaagctgaggaacact 18699680  T
Q  130 tggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattggatg-aaaaagagtttgagaatgcag 228  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  18699681 tggtaagtgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccatgagaattgagagaaactagatgaaaaaagagtttgagaatgcag 18699780  T
Q  229 aa 230  Q
    ||    
T  18699781 aa 18699782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 18731657 - 18731886
Alignment:
Q  2 tgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagt 101  Q
    |||||||||| |||||||| ||  ||  |||||||||| |||||| |||||||||||||||||||||  ||||||||| ||||||||||||||  |||||    
T  18731657 tgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctctgtagagatggccagtaaaaccgtcacgagt 18731756  T
Q  102 gtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaat 201  Q
    |||| ||||||| || || |||||||||||||||||||||  |||||||| ||||||||| ||||||||| ||||||||||||||| ||| ||||||||     
T  18731757 gtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccatgaaaatcgagagaaac 18731856  T
Q  202 tggatg-aaaaagagtttgagaatgcagaa 230  Q
    |||||| |||||||||||||||||||||||    
T  18731857 tggatgaaaaaagagtttgagaatgcagaa 18731886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 30 - 230
Target Start/End: Original strand, 18655658 - 18655859
Alignment:
Q  30 gtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacact 129  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||||||  |||||||||||||  ||||||||| ||||||| || || |||||||||    
T  18655658 gtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatgcccagtaaaaccgttacgagtgtcactgcccctgaagctgaggaacact 18655757  T
Q  130 tggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattggatg-aaaaagagtttgagaatgcag 228  Q
    ||||||||||||  |||||||| ||||||||| ||||||||| ||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||    
T  18655758 tggtaagtgaatcgataggaaaatgaagaggatgaggaaggtgattgcctagccatgaaaattgagagaaactggatgaaaaaagagtttgagaatgcag 18655857  T
Q  229 aa 230  Q
    ||    
T  18655858 aa 18655859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 18679720 - 18679949
Alignment:
Q  2 tgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagt 101  Q
    |||||||||| |||||||| ||  ||  |||||||||| |||||| |||||| |||||||||||||||||||||||||  |||||||||||||  |||||    
T  18679720 tgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcctttgtcagtaagagccttgtagagatgaccagtaaaaccgttacgagt 18679819  T
Q  102 gtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaat 201  Q
    |||| ||||||| || || |||||||||||||||||||||  |||||||| ||||||| | ||||||||| ||||||||||||||| ||| ||||||||     
T  18679820 gtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagagaatgaggaaggtgattgcatagccatgaaaatagagagaaac 18679919  T
Q  202 tggatg-aaaaagagtttgagaatgcagaa 230  Q
    |||||| |||||||||||||||||||||||    
T  18679920 tggatgaaaaaagagtttgagaatgcagaa 18679949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 18724238 - 18724432
Alignment:
Q  2 tgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagt 101  Q
    |||||||||| |||||||| ||  ||  |||||||||| |||||| ||||||||||||||||||||||||||||||||  |||||||||||||  |||||    
T  18724238 tgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatgaccagtaaaaccgttacgagt 18724337  T
Q  102 gtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgaga 196  Q
    |||| ||||||| || || |||||||||||||||||||||  |||||||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  18724338 gtcactgcccctgaagctgaggaacacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccatgagaattgaga 18724432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 49 - 230
Target Start/End: Original strand, 17989250 - 17989430
Alignment:
Q  49 attcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatagg 148  Q
    |||||||||||| ||||||||||  |||||||||| || |||||||| |||||||| |||||| || || | |||||||| | |||| ||||||||||||    
T  17989250 attcccttgtcaataagagccttcaagagattgccggtgaaaccgtaccgagtgtcggtgcccttacaaatgaggaacacatcgtaactgaatgcatagg 17989349  T
Q  149 aaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaagagtttgagaatgcagaa 230  Q
    ||| |||||||||| || ||||||||||||| |||||||||||||||||||||  |||| | ||||||||||||||||||||    
T  17989350 aaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataagatg-agaagagtttgagaatgcagaa 17989430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 49 - 230
Target Start/End: Complemental strand, 18073739 - 18073559
Alignment:
Q  49 attcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatagg 148  Q
    |||||||||||| ||||||||||  |||||||||| || |||||||| |||||||| |||||| || || | |||||||| | |||| ||||||||||||    
T  18073739 attcccttgtcaataagagccttcaagagattgccggtgaaaccgtaccgagtgtcggtgcccttacaaatgaggaacacatcgtaactgaatgcatagg 18073640  T
Q  149 aaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaagagtttgagaatgcagaa 230  Q
    ||| |||||||||| || ||||||||||||| |||||||||||||||||||||  |||| | ||||||||||||||||||||    
T  18073639 aaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataagatg-agaagagtttgagaatgcagaa 18073559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 5091147 - 5091240
Alignment:
Q  29 tgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaag 122  Q
    ||||||||||| ||||||  ||||||||| ||   ||||| |  |||||||| |||||||||||||| |||||||| ||||| |||||||||||    
T  5091147 tgtcatcaatgaaggtgtgaattcccttgacacgtagagcttcatagagatttccagtaaaaccgtaacgagtgtcggtgcctctaaaactaag 5091240  T

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Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 28164514 - 28164733
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||| |||||||| | |||| ||   ||||||||| | ||||  |||||||||||   ||| ||||| ||||||| |||||| |||||||  ||||    
T  28164514 gtgatttcttctcctctctcaagatcacaatcatcaatgaatgtgtgaattcccttgtcgtcaagggccttatagagatggccagtgaaaccgtcacgag 28164613  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaa 200  Q
    ||||| ||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||| |  || | ||||||||||||||||| |||||    
T  28164614 tgtcactgcccctaaaactgaggaacacttggtatgtgaatccataggaaattgaagaggaagaggaatgcgatcgtatagccatgagaattgacagaaa 28164713  T
Q  201 ttggatga-aaaagagtttg 219  Q
    |||||||| |||||||||||    
T  28164714 ttggatgagaaaagagtttg 28164733  T

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Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 28127862 - 28128042
Alignment:
Q  31 tcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacactt 130  Q
    ||||||||| | |||| |||||||||||||  ||| ||||||||||||| |||||| |||||||  ||||||||| ||||||| || || ||||||||||    
T  28127862 tcatcaatgaatgtgtggattcccttgtcataaagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacactt 28127961  T
Q  131 ggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattggatga-aaaagagt 216  Q
    |||| |||||| |||||||||||      ||||||||| || |||||||||||||||||||||| | ||||||||||| ||||||||    
T  28127962 ggtatgtgaatccataggaaatt------gaagaggaatgtgattgcatagccatgagaattgacaaaaattggatgagaaaagagt 28128042  T

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Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 268510 - 268704
Alignment:
Q  2 tgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagt 101  Q
    |||||||||| |||||||||||  ||   ||||||||| |||||| |||||||||||||||||||||||||||||||| |||| ||||||| |  |||||    
T  268510 tgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatggccaataaaaccctcacgagt 268609  T
Q  102 gtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgagaattgaga 196  Q
    ||||  ||| || ||  | ||||| || ||||| |  ||| |||| || ||||||||||||||||||||| |||||||||||||||||| |||||    
T  268610 gtcaccgcctctgaagttgaggaagacctggtaggcaaatccatatgagattgaagaggaagaggaaggtgattgcatagccatgagaactgaga 268704  T

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Target: scaffold0003 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 49 - 230
Target Start/End: Complemental strand, 59547 - 59367
Alignment:
Q  49 attcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatagg 148  Q
    |||||||||||| ||||||||||  |||||||||| || |||||||| |||||||| |||||| || || | |||||||| | |||| ||||||||||||    
T  59547 attcccttgtcaataagagccttcaagagattgccggtgaaaccgtaccgagtgtcggtgcccttacaaatgaggaacacatcgtaactgaatgcatagg 59448  T
Q  149 aaattgaagaggaagaggaaggtaattgcatagccatgagaattgagagaaattggatgaaaaagagtttgagaatgcagaa 230  Q
    ||| |||||||||| || ||||||||||||| |||||||||||||||||||||  |||| | ||||||||||||||||||||    
T  59447 aaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataagatg-agaagagtttgagaatgcagaa 59367  T

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Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 189
Target Start/End: Original strand, 29273936 - 29274123
Alignment:
Q  2 tgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagt 101  Q
    |||||||||| |||||||||||  ||   ||||||||| |||||| |||||||||||||||||||| ||||||||||| |||| |||||||||  |||||    
T  29273936 tgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagtcttgtagagatggccaataaaaccgtcacgagt 29274035  T
Q  102 gtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagaggaagaggaaggtaattgcatagccatgaga 189  Q
    ||||  ||| |||||  | ||||| || |||||||||||| |||| || ||||||||||||||||||||| |||||||||||||||||    
T  29274036 gtcaccgcctctaaagttgaggaagacctggtaagtgaatccatatgagattgaagaggaagaggaaggtgattgcatagccatgaga 29274123  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 31903873 - 31903728
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    |||||||||| ||||||||||||  | |  || |||||  |||||| ||||||||| |||  |||||| ||||||||||| ||||||||||| || ||||    
T  31903873 gtgatttcatgtcctctttgaagttcttcatcgtcaataaaggtgtggattcccttatcataaagagctttgtagagatttccagtaaaaccatagcgag 31903774  T
Q  101 tgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcata 146  Q
    ||||   ||| ||||| || |||||||| | ||| |||||| ||||    
T  31903773 tgtctaagcctctaaagctgaggaacacatcgtaggtgaatccata 31903728  T

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Target: scaffold0038 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 34744 - 34599
Alignment:
Q  4 atttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgt 103  Q
    ||||||||||||| ||||||  |  ||||||||||| |||||| ||||||||||| |  ||||||  | ||||||||  | |||||||| || |||||||    
T  34744 atttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattcccttgtgacaaagagctctatagagattttcggtaaaaccatagcgagtgt 34645  T
Q  104 cagtgcccctaaaactaaggaacacttggtaagtgaatgcatagga 149  Q
    || | || ||||||||||||||||| |  || |||||| |||||||    
T  34644 cactacctctaaaactaaggaacacgtcataggtgaatccatagga 34599  T

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Target: scaffold0038; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 116749 - 116658
Alignment:
Q  70 ttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcataggaaattgaagagga 161  Q
    ||||||||||| ||||||||||| || ||||||||| | || ||||||||||||||||| |  || |||||| |||||||||  ||||||||    
T  116749 ttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaacacgtcataggtgaatccataggaaaaggaagagga 116658  T

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Target: scaffold0038; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 27400 - 27343
Alignment:
Q  71 tgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacac 128  Q
    |||||||||| ||||||||||| || ||||||||| | || |||||||||||||||||    
T  27400 tgtagagatttccagtaaaaccataacgagtgtcaatacctctaaaactaaggaacac 27343  T

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Target: scaffold0038; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 42960 - 42864
Alignment:
Q  29 tgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaa 125  Q
    ||||||||||| |||||   |||||||| | |  |||| | ||||||||||| ||||||||||| || ||||||||| | || ||||||||||||||    
T  42960 tgtcatcaatgaaggtgcgaattcccttcttacaaagatctttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaa 42864  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 149
Target Start/End: Original strand, 58494 - 58595
Alignment:
Q  48 gattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacacttggtaagtgaatgcatag 147  Q
    |||||||||||||  ||||||  |||||||||| ||||||||||| || |||||||||   || ||||| ||||||||||| || || |||||| |||||    
T  58494 gattcccttgtcacaaagagctctgtagagatttccagtaaaaccatagcgagtgtcacaacctctaaagctaaggaacacgtgataggtgaatccatag 58593  T
Q  148 ga 149  Q
    ||    
T  58594 ga 58595  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 17993849 - 17993976
Alignment:
Q  1 gtgatttcatctcctctttgaagaccattgtcatcaatgtaggtgttgattcccttgtcagtaagagccttgtagagattgccagtaaaaccgtatcgag 100  Q
    ||||||||||| ||||| |||||  | |||||||| ||| ||||    ||||||||||||| |||||| || |||||||| || || ||||| |||||||    
T  17993849 gtgatttcatcacctctctgaagctctttgtcatcgatgaaggttcgaattcccttgtcagaaagagctttatagagattaccggtgaaaccatatcgag 17993948  T
Q  101 tgtcagtgcccctaaaactaaggaacac 128  Q
    | || || ||||| ||||||| ||||||    
T  17993949 tatcggtacccctgaaactaatgaacac 17993976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 3279638 - 3279592
Alignment:
Q  73 tagagattgccagtaaaaccgtatcgagtgtcagtgcccctaaaact 119  Q
    |||||||| ||||||||||| || |||||||||||||||||||||||    
T  3279638 tagagatttccagtaaaaccatagcgagtgtcagtgcccctaaaact 3279592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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