View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF9071_low_24 (Length: 324)
Name: NF9071_low_24
Description: NF9071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9071_low_24 |
 | |
|
| [»] scaffold0043 (1 HSPs) |
| | |
|
| [»] scaffold0611 (1 HSPs) |
| | |
|
| [»] scaffold0213 (1 HSPs) |
| | |
|
| [»] scaffold0343 (1 HSPs) |
| | |
|
| [»] scaffold0873 (1 HSPs) |
| | |
|
| [»] scaffold0277 (1 HSPs) |
| | |
|
| [»] scaffold0005 (1 HSPs) |
| | |
|
| [»] scaffold0549 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0043 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0043
Description:
Target: scaffold0043; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 95126 - 95430
Alignment:
| Q |
1 |
atagttctacagctgatggagaggaaggtctggcacttgtattcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaac |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
95126 |
atagttctacagctgatggagagggaggtctgacacttgtattcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaac |
95225 |
T |
|
| Q |
101 |
attctgattggaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagat |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
|
|
| T |
95226 |
attctgattggaaagtctcttagcagacccag---------aagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctagattcttagat |
95316 |
T |
|
| Q |
201 |
gtgaacttcatgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaatccagcaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
95317 |
gtgaacttcatgaaatcaagcttacgtttctcaccctcaagtggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaatccagcaa |
95416 |
T |
|
| Q |
301 |
ctgattgtttgatg |
314 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
95417 |
ctgattgtttgatg |
95430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0611 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0611
Description:
Target: scaffold0611; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 6173 - 5862
Alignment:
| Q |
1 |
atagttctacagctgatggagaggaaggtctggcacttgtattcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaac |
100 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6173 |
atagttttacagctgatggagagggaggtctagcacttgtattcttgggagacacaactctgatttcttctacctttcttttcttccttgttttctgaac |
6074 |
T |
|
| Q |
101 |
attctgattggaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagat |
200 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
6073 |
attctgattggaaagtctcttagcagatccagaaattccagaagttgtgaaggtaggcatgtttgaggtggtgatgcgtagttgacctagagttttagat |
5974 |
T |
|
| Q |
201 |
gtgaacttcatgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaatccagcaa |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
5973 |
gtgaacttcatgaaatcaagcttacgtttctcaccctcaaatggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaaaccagcaa |
5874 |
T |
|
| Q |
301 |
ctgattgtttga |
312 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5873 |
ctgattgtttga |
5862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 170; Significance: 3e-91; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 17987144 - 17987441
Alignment:
| Q |
15 |
gatggagaggaaggtctggcacttgtattcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaacattctgattggaaa |
114 |
Q |
| |
|
|||||||||||| | || ||||||||||||||| || | ||| ||||||||||||||||||||||||||||||||| || ||||||| || ||||| | |
|
|
| T |
17987144 |
gatggagaggaaagactaacacttgtattcttggaagtcatatccctgatttcttctacctttcttttcttccttgttctcagaacattttgtttggaca |
17987243 |
T |
|
| Q |
115 |
gtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttcatgaa |
214 |
Q |
| |
|
|||||||| ||| |||||||||||||| ||||| || || |||||||||||||||||||| || |||||||||| ||| |||||||||||||||||||| |
|
|
| T |
17987244 |
ttctcttagtagatccagaagttccagaggttgtaaaagtaggcatgtttgaggtggtgatacgaagttgacctagagttttagatgtgaacttcatgaa |
17987343 |
T |
|
| Q |
215 |
atcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaatccagcaactgattgtttga |
312 |
Q |
| |
|
||||||||| ||||| ||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17987344 |
atcaagcttgcgtttttcaccatcaagtggtatgtttgctttctgaaagatggaagttaggtgcattccataaggcaacccagcaactgattgtttga |
17987441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 17159004 - 17158856
Alignment:
| Q |
48 |
ggagactcatctctgatttcttctacctttcttttcttccttgttttctgaacattctgattggaaagtctcttagcagacccagaagttccagaagttg |
147 |
Q |
| |
|
||||| ||||||||||| || ||||||||||| |||||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||| |
|
|
| T |
17159004 |
ggagattcatctctgatctcctctacctttctcttcttcctggttttctgaacattctgattagaaggtctcttaacagacccagaagttccagatgttg |
17158905 |
T |
|
| Q |
148 |
tgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtctt |
196 |
Q |
| |
|
|| | | ||||||||| || || ||||| ||||||| |||| |||||| |
|
|
| T |
17158904 |
tggatgatggcatgttggatgtagtgatatgtagttgtcctagagtctt |
17158856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0213 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0213
Description:
Target: scaffold0213; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 11 - 286
Target Start/End: Complemental strand, 20301 - 20026
Alignment:
| Q |
11 |
agctgatggagaggaaggtctggcacttgtattcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaacattctgattg |
110 |
Q |
| |
|
||||| |||||||||||||||| | || ||||| |||| | ||||||||| || ||||||| ||| |||||||| |||||||||||||||||||| |
|
|
| T |
20301 |
agctggtggagaggaaggtctgacttctgcattctcaagagatttatctctgatctcctctacctatctcttcttcctggttttctgaacattctgatta |
20202 |
T |
|
| Q |
111 |
gaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttca |
210 |
Q |
| |
|
||| |||||||| |||||| |||||||||||| |||||| | | |||||||||||| ||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
20201 |
gaaggtctcttaacagacctagaagttccagaggttgtggaagatggcatgtttgaaatggtgatgcgtagttgacctaaagtatttgatgtgaacttca |
20102 |
T |
|
| Q |
211 |
tgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagatggaagttaggtgcattccata |
286 |
Q |
| |
|
||||||||||||| ||||| |||||| || || | |||| |||| ||||| ||||||||||| ||||||||||| |
|
|
| T |
20101 |
tgaaatcaagcttgcgttttcaaccctcaagaggcacattttccttttgaaaaatggaagttagatgcattccata |
20026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0343 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0343
Description:
Target: scaffold0343; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 11 - 299
Target Start/End: Original strand, 18281 - 18569
Alignment:
| Q |
11 |
agctgatggagaggaaggtctggcacttgtattcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaacattctgattg |
110 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||| | ||| |||| ||| ||||| |||| |||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
18281 |
agctgatggagagggaggtctggcacctacattctcagaagattcatttctaatttcctctagctttcttttcttccttgtcttctgaacattctggttg |
18380 |
T |
|
| Q |
111 |
gaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttca |
210 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| | |||| | | ||||||||| || || |||||| | |||||||||| ||| || || | || ||| |
|
|
| T |
18381 |
gaaagtctcttaacagacccagaagttccagaggctgtggaagatggcatgttggatgtagtgatgtggagttgacctagagttttggaagaaaaagtca |
18480 |
T |
|
| Q |
211 |
tgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaatccagca |
299 |
Q |
| |
|
|||| || ||||| ||||| || | || || || | ||||||||| | || ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
18481 |
tgaagtctagcttgcgtttttcttcttcaagaggcacatttgcctttttgaaaatggaagttagatgcattccatatggcaatccagca |
18569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0873 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0873
Description:
Target: scaffold0873; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 299
Target Start/End: Original strand, 739 - 1027
Alignment:
| Q |
11 |
agctgatggagaggaaggtctggcacttgtattcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaacattctgattg |
110 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||| | ||| |||| ||||||||| |||| |||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
739 |
agctgatggagagggaggtctggcacctacattctcagaagattcatttctgatttcctctagctttcttttcttccttgtcttctgaacattctggttg |
838 |
T |
|
| Q |
111 |
gaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttca |
210 |
Q |
| |
|
|||||||||||| ||||||||||||||| ||| | |||| | | ||||||||| || || |||||| | |||| ||||| ||| || || | || ||| |
|
|
| T |
839 |
gaaagtctcttaacagacccagaagttctagaggctgtggaagatggcatgttggatgtagtgatgtggagttaacctagagttttggaagaaaaagtca |
938 |
T |
|
| Q |
211 |
tgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaatccagca |
299 |
Q |
| |
|
|||| || ||||| ||||| || | || || || | ||||||||| | || ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
939 |
tgaagtctagcttgcgtttttcttcttcaagaggcacatttgcctttttgaaaatggaagttagatgcattccatatggcaatccagca |
1027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 11 - 299
Target Start/End: Complemental strand, 21456327 - 21456039
Alignment:
| Q |
11 |
agctgatggagaggaaggtctggcacttgtattcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaacattctgattg |
110 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||| | ||| |||| ||| ||||| |||| |||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
21456327 |
agctgatggagagggaggtctggcacctacattctcagaagattcatttctaatttcctctagctttcttttcttccttgtcttctgaacattctggttg |
21456228 |
T |
|
| Q |
111 |
gaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttca |
210 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| | |||| | | ||||||||| || | |||||| | |||||||||| ||| || || | || ||| |
|
|
| T |
21456227 |
gaaagtctcttaacagacccagaagttccagaggctgtggaagatggcatgttggatggagtgatgtggagttgacctagagttttggaagaaaaagtca |
21456128 |
T |
|
| Q |
211 |
tgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaatccagca |
299 |
Q |
| |
|
|||| || ||||| ||||| || | || || || | ||||||||| | || ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
21456127 |
tgaagtctagcttgcgtttttcttcttcaagaggcacatttgcctttttgaaaatggaagttagatgcattccatatggcaatccagca |
21456039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 229
Target Start/End: Original strand, 19384160 - 19384348
Alignment:
| Q |
41 |
attcttgggagactcatctctgatttcttctacctttcttttcttccttgttttctgaacattctgattggaaagtctcttagcagacccagaagttcca |
140 |
Q |
| |
|
|||||| ||||| |||||| |||| || |||||| |||| |||||||| |||||| |||||||||||| ||| |||||||| |||||||||||| |||| |
|
|
| T |
19384160 |
attcttaggagattcatctatgatctcctctaccgttctcttcttcctggttttcaaaacattctgattagaaggtctcttaacagacccagaagatcca |
19384259 |
T |
|
| Q |
141 |
gaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttcatgaaatcaagcttacgttt |
229 |
Q |
| |
|
|| |||||| ||| ||||||||| || || ||||| ||||||| |||| |||||| || | ||| ||||||| || ||||||||||| |
|
|
| T |
19384260 |
gaggttgtggaggatggcatgttggatgtagtgatatgtagttgtcctagagtcttggaagagaatgtcatgaagtctagcttacgttt |
19384348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 286
Target Start/End: Original strand, 21712 - 21937
Alignment:
| Q |
61 |
tgatttcttctacctttcttttcttccttgttttctgaacattctgattggaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcat |
160 |
Q |
| |
|
|||||||||| || |||||||||||| | ||||||||||||||||| |||| ||||||| |||| ||||| | |||||| ||| || || |||||| |
|
|
| T |
21712 |
tgatttcttcaacttttcttttcttcacagctttctgaacattctgatcagaaattctcttaccagatccagagggtccagaggttttgggggctggcat |
21811 |
T |
|
| Q |
161 |
gtttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttcatgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctga |
260 |
Q |
| |
|
|| || | || ||| | ||||||||||| ||||| || | || |||| ||||| ||||| |||||||| || || || || | |||||||| ||| |
|
|
| T |
21812 |
attggatgaagtaatgtggagttgacctaaggtcttggaagaaaaggtcataaaatctagctttcgtttctctccttcaaggggcacttttgccttttga |
21911 |
T |
|
| Q |
261 |
aagatggaagttaggtgcattccata |
286 |
Q |
| |
|
|| ||||||||||| ||||||||||| |
|
|
| T |
21912 |
aaaatggaagttagatgcattccata |
21937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 286
Target Start/End: Complemental strand, 16408989 - 16408769
Alignment:
| Q |
66 |
tcttctacctttcttttcttccttgttttctgaacattctgattggaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttg |
165 |
Q |
| |
|
||||| ||||||||||||||| | ||||||||||||||||| ||| ||| ||| |||| ||||| | |||||| ||| || ||| ||||||||| | |
|
|
| T |
16408989 |
tcttcaacctttcttttcttcacggctttctgaacattctgatcagaagttcttttaccagatccagagggtccagatgttttggaggctggcatgttgg |
16408890 |
T |
|
| Q |
166 |
aggtggtgatgcgtagttgacctaaagtcttagatgtgaacttcatgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagat |
265 |
Q |
| |
|
| | || ||| | |||||||||| ||||| || | ||| |||| ||||| |||||||||||||| || || || || | |||||||| ||||| || |
|
|
| T |
16408889 |
atgaagtaatgtggagttgacctagggtcttggaagagaaggtcataaaatctagcttacgtttctctccttcaaggggcacttttgccttttgaaatat |
16408790 |
T |
|
| Q |
266 |
ggaagttaggtgcattccata |
286 |
Q |
| |
|
|||||| || ||||||||||| |
|
|
| T |
16408789 |
ggaagtgagatgcattccata |
16408769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 299
Target Start/End: Complemental strand, 21458859 - 21458626
Alignment:
| Q |
66 |
tcttctacctttcttttcttccttgttttctgaacattctgattggaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttg |
165 |
Q |
| |
|
||||| ||| ||||||||||| | ||||||||||||||||| |||| ||||||| |||| ||||| | |||||||||| || || ||||||||| | |
|
|
| T |
21458859 |
tcttcaacccttcttttcttcacagctttctgaacattctgatcagaaattctcttaccagatccagagggtccagaagttttggagactggcatgttag |
21458760 |
T |
|
| Q |
166 |
aggtggtgatgcgtagttgacctaaagtcttagatgtgaacttcatgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagat |
265 |
Q |
| |
|
| | || ||| | ||||||||||| ||||| || | || |||| ||||| ||||||||||| || || || || || | | |||||| ||||| || |
|
|
| T |
21458759 |
atgaagtaatgtggagttgacctaaggtcttggaagaaaaggtcataaaatccagcttacgtttatctccttcaagaggcacttatgccttttgaaaaat |
21458660 |
T |
|
| Q |
266 |
ggaagttaggtgcattccataaggcaatccagca |
299 |
Q |
| |
|
|||||| || ||||||||||| || | ||||||| |
|
|
| T |
21458659 |
ggaagtgagatgcattccatagggtagtccagca |
21458626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 299
Target Start/End: Original strand, 312346 - 312589
Alignment:
| Q |
56 |
atctctgatttcttctacctttcttttcttccttgttttctgaacattctgattggaaagtctcttagcagacccagaagttccagaagttgtgaaggtt |
155 |
Q |
| |
|
|||| |||| ||||| ||| ||||||||||| | ||||||||||||||||| |||| ||| ||| |||| ||||| | |||||||||| || ||| | |
|
|
| T |
312346 |
atctgtgatctcttcaacccttcttttcttcacagctttctgaacattctgatcagaaattcttttaccagatccagagggtccagaagttttggaggct |
312445 |
T |
|
| Q |
156 |
ggcatgtttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttcatgaaatcaagcttacgtttctcaccctccagtggtatatttgcct |
255 |
Q |
| |
|
||||| || || | || ||| | ||||||||||| ||||| || | || |||| ||||| |||||||||||||| || || || || | ||||||| |
|
|
| T |
312446 |
ggcatattggatgaagtaatgtggagttgacctaaggtcttggaagaaaaggtcataaaatctagcttacgtttctctccttcaagaggcacttttgcct |
312545 |
T |
|
| Q |
256 |
tctgaaagatggaagttaggtgcattccataaggcaatccagca |
299 |
Q |
| |
|
| | || |||||||| || ||||||||||| || | ||||||| |
|
|
| T |
312546 |
tttagaaaatggaagtgagatgcattccatagggtagtccagca |
312589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 299
Target Start/End: Original strand, 9537481 - 9537686
Alignment:
| Q |
94 |
tctgaacattctgattggaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgtttgaggtggtgatgcgtagttgacctaaagt |
193 |
Q |
| |
|
||||||||||||||| |||| ||| ||| |||| ||||| | |||||||||| || || ||||||||| || | || ||| | ||||||||||| || |
|
|
| T |
9537481 |
tctgaacattctgatcagaaattcttttaccagatccagagggtccagaagttttggagactggcatgttggatgaagtaatgtggagttgacctaaggt |
9537580 |
T |
|
| Q |
194 |
cttagatgtgaacttcatgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaagatggaagttaggtgcattccataaggcaat |
293 |
Q |
| |
|
||| || | || |||| ||||| |||||||||||||| || || || || | |||||||| || || |||||||| || ||||||||||| || | | |
|
|
| T |
9537581 |
cttggaagaaaaggtcataaaatccagcttacgtttctctccttcaagaggcacttttgccttttggaaaatggaagtgagatgcattccatagggtagt |
9537680 |
T |
|
| Q |
294 |
ccagca |
299 |
Q |
| |
|
|||||| |
|
|
| T |
9537681 |
ccagca |
9537686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0549 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0549
Description:
Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 10870 - 10804
Alignment:
| Q |
15 |
gatggagaggaaggtctggcacttgtattcttgggagactcatctctgatttcttctacctttcttt |
81 |
Q |
| |
|
|||||||||||| | || ||||||||||||||| || | ||| |||||||||||||||||||||| |
|
|
| T |
10870 |
gatggagaggaaagactaacacttgtattcttggaagtcatatccctgatttcttctacctttcttt |
10804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 299
Target Start/End: Complemental strand, 45022574 - 45022338
Alignment:
| Q |
63 |
atttcttctacctttcttttcttccttgttttctgaacattctgattggaaagtctcttagcagacccagaagttccagaagttgtgaaggttggcatgt |
162 |
Q |
| |
|
|||||||| ||| || |||||||| | ||||||||||||||||| |||| ||| ||| |||| ||||| | |||||||||| || || |||||||| |
|
|
| T |
45022574 |
atttcttcaacccttattttcttcacagctttctgaacattctgatcagaaattcttttaccagatccagagggtccagaagttttggagactggcatgt |
45022475 |
T |
|
| Q |
163 |
ttgaggtggtgatgcgtagttgacctaaagtcttagatgtgaacttcatgaaatcaagcttacgtttctcaccctccagtggtatatttgccttctgaaa |
262 |
Q |
| |
|
| || | || ||| | ||||||||||| ||||| || | || |||| ||||| ||||||||||| || || || || || | | |||||| || || |
|
|
| T |
45022474 |
tggatgaagtaatgtggagttgacctaaggtcttggaagaaaaggtcataaaatccagcttacgtttttctccttcaagaggcacttctgccttttggaa |
45022375 |
T |
|
| Q |
263 |
gatggaagttaggtgcattccataaggcaatccagca |
299 |
Q |
| |
|
|||||||| || ||||||||||| || | ||||||| |
|
|
| T |
45022374 |
aatggaagtgagatgcattccatagggtagtccagca |
45022338 |
T |
|
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