View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9073_high_1 (Length: 558)

Name: NF9073_high_1
Description: NF9073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9073_high_1
NF9073_high_1
[»] chr5 (44 HSPs)
chr5 (185-542)||(6900091-6900457)
chr5 (191-542)||(6238381-6238741)
chr5 (191-542)||(24477481-24477824)
chr5 (191-432)||(9996442-9996684)
chr5 (191-432)||(38355684-38355930)
chr5 (191-432)||(36016451-36016698)
chr5 (225-432)||(21731916-21732124)
chr5 (191-435)||(4695472-4695721)
chr5 (225-432)||(42860008-42860216)
chr5 (225-432)||(6955486-6955693)
chr5 (225-432)||(10641759-10641961)
chr5 (225-432)||(1845612-1845812)
chr5 (252-432)||(35038471-35038652)
chr5 (241-535)||(4970245-4970531)
chr5 (191-357)||(33907498-33907669)
chr5 (244-357)||(31230799-31230912)
chr5 (226-357)||(3435926-3436057)
chr5 (241-342)||(37205281-37205382)
chr5 (244-334)||(75628-75718)
chr5 (191-233)||(20337728-20337770)
chr5 (191-233)||(17017073-17017115)
chr5 (191-233)||(21151193-21151235)
chr5 (191-233)||(21158334-21158376)
chr5 (235-269)||(1845489-1845523)
chr5 (235-269)||(4699929-4699963)
chr5 (235-269)||(6238253-6238287)
chr5 (235-269)||(6899963-6899997)
chr5 (235-269)||(6955791-6955825)
chr5 (235-269)||(9996310-9996344)
chr5 (235-269)||(21731784-21731818)
chr5 (235-269)||(24477354-24477388)
chr5 (235-269)||(35038752-35038786)
chr5 (235-269)||(35838178-35838212)
chr5 (235-269)||(36016341-36016375)
chr5 (235-269)||(38356025-38356059)
chr5 (191-232)||(19646397-19646438)
chr5 (184-216)||(1463690-1463722)
chr5 (241-269)||(2466330-2466358)
chr5 (191-231)||(7344200-7344240)
chr5 (241-269)||(20122765-20122793)
chr5 (241-269)||(26264414-26264442)
chr5 (241-269)||(26507294-26507322)
chr5 (241-269)||(28759394-28759422)
chr5 (251-342)||(38975630-38975722)
[»] chr3 (38 HSPs)
chr3 (190-542)||(43745831-43746192)
chr3 (190-432)||(27877726-27877973)
chr3 (191-435)||(6884246-6884495)
chr3 (190-432)||(46312059-46312300)
chr3 (192-533)||(33985916-33986271)
chr3 (228-432)||(46219298-46219503)
chr3 (252-432)||(21075611-21075792)
chr3 (340-542)||(27972321-27972530)
chr3 (191-357)||(43736554-43736715)
chr3 (241-340)||(50737163-50737262)
chr3 (241-340)||(50775593-50775692)
chr3 (235-350)||(26843529-26843644)
chr3 (256-341)||(19976416-19976501)
chr3 (191-233)||(1459732-1459774)
chr3 (191-233)||(29522253-29522295)
chr3 (191-233)||(51884763-51884805)
chr3 (245-318)||(11486222-11486295)
chr3 (191-273)||(36638661-36638741)
chr3 (295-342)||(21390510-21390557)
chr3 (190-233)||(49507963-49508006)
chr3 (235-269)||(21075890-21075924)
chr3 (235-269)||(27877596-27877630)
chr3 (235-269)||(43746285-43746319)
chr3 (235-269)||(46311928-46311962)
chr3 (191-233)||(48912743-48912785)
chr3 (190-231)||(14740476-14740517)
chr3 (243-292)||(26319206-26319255)
chr3 (190-231)||(35603282-35603323)
chr3 (190-219)||(41208840-41208869)
chr3 (241-269)||(7399761-7399789)
chr3 (241-269)||(7910187-7910215)
chr3 (191-219)||(9300523-9300551)
chr3 (241-269)||(9301089-9301117)
chr3 (241-269)||(10267899-10267927)
chr3 (241-269)||(10804565-10804593)
chr3 (255-342)||(20511246-20511331)
chr3 (241-269)||(26823078-26823106)
chr3 (241-269)||(43088029-43088057)
[»] chr8 (32 HSPs)
chr8 (191-542)||(30436014-30436373)
chr8 (191-542)||(35812982-35813343)
chr8 (225-432)||(3940863-3941071)
chr8 (191-407)||(3653974-3654196)
chr8 (184-435)||(42738501-42738751)
chr8 (190-375)||(23221729-23221920)
chr8 (190-337)||(2350410-2350562)
chr8 (245-342)||(15244600-15244697)
chr8 (243-344)||(28968942-28969043)
chr8 (244-324)||(45450896-45450976)
chr8 (241-342)||(6143510-6143611)
chr8 (191-233)||(32018941-32018983)
chr8 (191-233)||(38895291-38895333)
chr8 (191-226)||(5913945-5913980)
chr8 (243-321)||(9201726-9201804)
chr8 (235-269)||(30436466-30436500)
chr8 (235-269)||(35813435-35813469)
chr8 (241-269)||(5927139-5927167)
chr8 (241-269)||(6266332-6266360)
chr8 (241-269)||(7433470-7433498)
chr8 (241-269)||(11202211-11202239)
chr8 (241-269)||(15041396-15041424)
chr8 (191-219)||(24101209-24101237)
chr8 (241-269)||(24101777-24101805)
chr8 (241-269)||(26098334-26098362)
chr8 (241-269)||(27640048-27640076)
chr8 (241-269)||(31894964-31894992)
chr8 (241-269)||(37819272-37819300)
chr8 (241-269)||(38231757-38231785)
chr8 (241-269)||(40027805-40027833)
chr8 (191-219)||(41377739-41377767)
chr8 (241-269)||(41827583-41827611)
[»] chr7 (29 HSPs)
chr7 (191-542)||(10993385-10993747)
chr7 (191-511)||(39489006-39489324)
chr7 (225-432)||(1873840-1874048)
chr7 (235-417)||(23025372-23025555)
chr7 (326-432)||(16526383-16526489)
chr7 (191-357)||(17471288-17471454)
chr7 (191-357)||(17581760-17581926)
chr7 (191-297)||(16526514-16526624)
chr7 (225-321)||(4267652-4267748)
chr7 (245-357)||(49113327-49113439)
chr7 (249-361)||(41202576-41202690)
chr7 (241-342)||(35710575-35710676)
chr7 (241-342)||(31271522-31271623)
chr7 (251-338)||(19106606-19106693)
chr7 (190-233)||(40921240-40921283)
chr7 (379-431)||(16526463-16526515)
chr7 (235-269)||(1873706-1873740)
chr7 (235-269)||(10993257-10993291)
chr7 (253-321)||(7505880-7505948)
chr7 (241-269)||(8613813-8613841)
chr7 (190-218)||(15456689-15456717)
chr7 (241-269)||(24764251-24764279)
chr7 (191-231)||(31325980-31326020)
chr7 (241-269)||(32795774-32795802)
chr7 (191-231)||(33889806-33889846)
chr7 (241-269)||(34182095-34182123)
chr7 (241-269)||(34202684-34202712)
chr7 (241-269)||(37471547-37471575)
chr7 (241-269)||(47761712-47761740)
[»] chr4 (46 HSPs)
chr4 (225-542)||(17543947-17544268)
chr4 (191-432)||(47295774-47296016)
chr4 (191-432)||(45522697-45522939)
chr4 (190-432)||(951562-951810)
chr4 (191-432)||(27870206-27870448)
chr4 (191-432)||(20033949-20034196)
chr4 (190-533)||(3409789-3410112)
chr4 (191-431)||(43285413-43285659)
chr4 (191-435)||(52463235-52463485)
chr4 (237-432)||(2323507-2323703)
chr4 (225-432)||(54134196-54134402)
chr4 (191-321)||(32594799-32594929)
chr4 (191-435)||(32768283-32768530)
chr4 (243-344)||(34858316-34858417)
chr4 (241-338)||(44341773-44341870)
chr4 (235-294)||(16030487-16030546)
chr4 (194-284)||(50005493-50005587)
chr4 (256-342)||(7137677-7137763)
chr4 (190-233)||(41882604-41882647)
chr4 (241-321)||(9454506-9454586)
chr4 (191-231)||(19823063-19823103)
chr4 (191-231)||(31615960-31616000)
chr4 (241-321)||(44857025-44857105)
chr4 (226-269)||(951444-951487)
chr4 (190-233)||(16624100-16624143)
chr4 (191-226)||(52278249-52278284)
chr4 (243-321)||(1324083-1324161)
chr4 (235-269)||(17543819-17543853)
chr4 (235-269)||(20034300-20034334)
chr4 (235-269)||(27870093-27870127)
chr4 (295-341)||(34031045-34031091)
chr4 (235-269)||(39345903-39345937)
chr4 (235-269)||(47295635-47295669)
chr4 (235-269)||(54134494-54134528)
chr4 (191-220)||(1324041-1324070)
chr4 (255-312)||(1704507-1704564)
chr4 (241-269)||(15194539-15194567)
chr4 (191-219)||(26706354-26706382)
chr4 (241-269)||(39240456-39240484)
chr4 (241-269)||(39809650-39809678)
chr4 (241-269)||(40731233-40731261)
chr4 (241-321)||(41361976-41362056)
chr4 (235-267)||(45522573-45522605)
chr4 (241-269)||(51435606-51435634)
chr4 (241-269)||(53724923-53724951)
chr4 (241-269)||(56264435-56264463)
[»] scaffold0564 (1 HSPs)
scaffold0564 (191-511)||(9780-10112)
[»] chr6 (28 HSPs)
chr6 (190-542)||(26519653-26520013)
chr6 (251-542)||(31470975-31471272)
chr6 (191-432)||(11369202-11369450)
chr6 (191-410)||(15071023-15071248)
chr6 (235-432)||(10997942-10998132)
chr6 (235-542)||(20143381-20143687)
chr6 (235-542)||(22189152-22189458)
chr6 (191-321)||(12075821-12075956)
chr6 (191-321)||(12271376-12271511)
chr6 (191-342)||(31654852-31655008)
chr6 (241-343)||(17868450-17868552)
chr6 (241-342)||(17878233-17878334)
chr6 (191-321)||(3044997-3045132)
chr6 (241-339)||(27965829-27965927)
chr6 (235-269)||(10997810-10997844)
chr6 (235-269)||(11369581-11369615)
chr6 (235-269)||(15065997-15066031)
chr6 (191-233)||(32464863-32464905)
chr6 (241-269)||(2067204-2067232)
chr6 (241-269)||(2703019-2703047)
chr6 (241-269)||(4170957-4170985)
chr6 (241-269)||(15068043-15068071)
chr6 (190-226)||(21036681-21036717)
chr6 (241-269)||(22988193-22988221)
chr6 (241-269)||(23800175-23800203)
chr6 (241-269)||(26555240-26555268)
chr6 (241-269)||(29641068-29641096)
chr6 (241-269)||(31511247-31511275)
[»] chr1 (36 HSPs)
chr1 (225-511)||(12749701-12749992)
chr1 (191-432)||(9660488-9660730)
chr1 (190-432)||(33189222-33189468)
chr1 (225-432)||(43780869-43781077)
chr1 (225-432)||(45756939-45757146)
chr1 (252-407)||(47188271-47188427)
chr1 (241-383)||(46158317-46158459)
chr1 (191-350)||(4221843-4222007)
chr1 (225-361)||(17332062-17332197)
chr1 (191-357)||(45566523-45566693)
chr1 (225-361)||(48469610-48469746)
chr1 (352-432)||(42763074-42763154)
chr1 (230-357)||(49228490-49228618)
chr1 (191-321)||(32058147-32058282)
chr1 (241-342)||(43263175-43263276)
chr1 (225-270)||(42763025-42763070)
chr1 (276-342)||(31488879-31488945)
chr1 (257-336)||(6502009-6502088)
chr1 (190-231)||(23973639-23973680)
chr1 (245-336)||(24682295-24682386)
chr1 (191-233)||(700562-700604)
chr1 (235-269)||(9660827-9660861)
chr1 (235-269)||(12745648-12745682)
chr1 (235-269)||(12756637-12756671)
chr1 (235-269)||(33189096-33189130)
chr1 (500-542)||(45566416-45566458)
chr1 (235-269)||(45757242-45757276)
chr1 (241-269)||(1858808-1858836)
chr1 (241-269)||(5114965-5114993)
chr1 (241-269)||(19406706-19406734)
chr1 (191-231)||(21720446-21720486)
chr1 (191-231)||(27415615-27415655)
chr1 (241-269)||(28199277-28199305)
chr1 (191-219)||(28472823-28472851)
chr1 (241-269)||(39995492-39995520)
chr1 (241-269)||(41310561-41310589)
[»] chr2 (32 HSPs)
chr2 (191-417)||(21104214-21104446)
chr2 (12-191)||(44685214-44685393)
chr2 (225-432)||(25096478-25096686)
chr2 (225-432)||(29205691-29205899)
chr2 (225-432)||(40860736-40860944)
chr2 (225-432)||(40000491-40000699)
chr2 (191-432)||(15560245-15560484)
chr2 (191-431)||(15613306-15613556)
chr2 (197-342)||(17921483-17921632)
chr2 (241-347)||(42730072-42730178)
chr2 (225-357)||(9471615-9471748)
chr2 (352-432)||(29201235-29201315)
chr2 (241-342)||(26555853-26555954)
chr2 (255-357)||(5271903-5272005)
chr2 (244-342)||(38837341-38837439)
chr2 (243-342)||(4469922-4470021)
chr2 (245-342)||(38571367-38571464)
chr2 (191-233)||(10710423-10710465)
chr2 (191-226)||(19944238-19944273)
chr2 (191-226)||(25868379-25868414)
chr2 (235-269)||(15560575-15560609)
chr2 (191-318)||(20921886-20922019)
chr2 (235-269)||(21747487-21747521)
chr2 (235-269)||(25096374-25096408)
chr2 (235-269)||(29201415-29201449)
chr2 (191-233)||(30556240-30556282)
chr2 (235-269)||(40000796-40000830)
chr2 (191-219)||(1345733-1345761)
chr2 (241-269)||(13247787-13247815)
chr2 (241-269)||(27495942-27495970)
chr2 (241-269)||(30801230-30801258)
chr2 (241-269)||(35439560-35439588)
[»] scaffold0219 (2 HSPs)
scaffold0219 (236-352)||(16430-16540)
scaffold0219 (235-269)||(16639-16673)
[»] scaffold0041 (1 HSPs)
scaffold0041 (190-233)||(51812-51855)
[»] scaffold0664 (1 HSPs)
scaffold0664 (241-269)||(7807-7835)
[»] scaffold0173 (1 HSPs)
scaffold0173 (241-269)||(21967-21995)


Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 185 - 542
Target Start/End: Complemental strand, 6900457 - 6900091
Alignment:
Q  185 tcttcctagagctgtcaaaacgggcggcccgacccgtttaggc-----ccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaata 279  Q
    |||| |||||||||||||||||||||||||| |||||||||||     |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6900457 tcttactagagctgtcaaaacgggcggcccggcccgtttaggctcggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaata 6900358  T
Q  280 tgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattctttta 378  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6900357 tgggctgcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattctttta 6900258  T
Q  379 agtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc---tgtannnnnnnnccttcccattctttaaggattgaacataata 475  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||   | |         ||||||| |||||||||||||||||||||||    
T  6900257 agtacgaaacatacataaatatgccgggctaacgggccagcccgggcccgtatcagtttttttttttttccttccctttctttaaggattgaacataata 6900158  T
Q  476 acttaaatatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  6900157 acttaaatatacacaaataggttaatagtgaacaaaagataaattaagattgatccaagataataac 6900091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 191 - 542
Target Start/End: Complemental strand, 6238741 - 6238381
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  6238741 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 6238642  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6238641 gcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtacg 6238542  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc---tgtannnnnnnnccttcccattctttaaggattgaacataataacttaa 481  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||   | |         ||||||| |||||||||||||||||||||||||||||    
T  6238541 aaacatacataaatatgccgggctaacgggccagcccgggcccgtatcagtttttttttttttccttccctttctttaaggattgaacataataacttaa 6238442  T
Q  482 atatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  6238441 atatacacaaataggttaatagtgaacaaaagataaattaagattgatccaagataataac 6238381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 191 - 542
Target Start/End: Complemental strand, 24477824 - 24477481
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  24477824 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 24477725  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttttt-cttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| ||||||||                  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24477724 gcaaaaaatgagcccgagcccgg------------------gctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtacg 24477643  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc----tgtannnnnnnnccttcccattctttaaggattgaacataataactta 480  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||    | |         ||||||| ||||||||||||||||||||||||||||    
T  24477642 aaacatacataaatatgccgggctaacgggccagcccgggcccgtatcagttttttttttttttccttccctttctttaaggattgaacataataactta 24477543  T
Q  481 aatatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  24477542 aatatacacaaataggttaatagtgaacaaaagataaattaagattgatccaagataataac 24477481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 191 - 432
Target Start/End: Complemental strand, 9996684 - 9996442
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9996684 tagagctgtcaaaacgggcggcccggcccgtttaggcccggccgggccaagggcttttaagggctgggctaaaaagcccggtttgaatatgggctgcaaa 9996585  T
Q  291 aaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaaca 389  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || |    
T  9996584 aaatgagcccgagcccggccctatacgggctcccgggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaata 9996485  T
Q  390 tacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  9996484 tacataaatatgccgggctaacgggccagcccgggcccgtatc 9996442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 191 - 432
Target Start/End: Original strand, 38355684 - 38355930
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||     ||||||||||||||| |||||||||||||||||||||||||||||||    
T  38355684 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcccggccgggccaagggcttttaagggtcgggctaaaaagcccggtttgaatatgggct 38355783  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacga 385  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  38355784 gcaaaaaatgagcccgagcccggccctatacgggctccctggctaacgggccagccctggcccgtattttttcttccctttttcattcttttaagtacgg 38355883  T
Q  386 aacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  38355884 aacatacataaatatgtcgggctaacgggccagcccgggcccgtatc 38355930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 191 - 432
Target Start/End: Complemental strand, 36016698 - 36016451
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  36016698 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 36016599  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||| |    
T  36016598 gcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggctggccctggcccgtatttttttcttcccttttccattattttaagtatg 36016499  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
     |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  36016498 gaacatacataaatatgccgggctaacgggccagcccgggcccgtatc 36016451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 225 - 432
Target Start/End: Complemental strand, 21732124 - 21731916
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  21732124 ggccgggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctccc 21732025  T
Q  325 aggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |    
T  21732024 gggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgg 21731925  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  21731924 gcccgtatc 21731916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 191 - 435
Target Start/End: Original strand, 4695472 - 4695721
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  4695472 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 4695571  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttttt--cttcccttttccattcttttaagtac 383  Q
    || |||||   ||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  4695572 gctaaaaacaggcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttccttcccttttccattcttttaagtac 4695671  T
Q  384 gaaacatacataaatatgccgggctaacgggccaacccaggcccgtatctgt 435  Q
    |||  |||||||||||| |||||||||||||||| ||| |||||||||||||    
T  4695672 gaa--atacataaatataccgggctaacgggccagcccgggcccgtatctgt 4695721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 42860008 - 42860216
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  42860008 ggccgggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagtccggccctatacgggctccc 42860107  T
Q  325 aggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |    
T  42860108 gggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggtcaacccgg 42860207  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  42860208 gcccgtatc 42860216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 6955486 - 6955693
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||    
T  6955486 ggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctata-gggctccc 6955584  T
Q  325 aggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| |    
T  6955585 gggctaacgggccggccctgacccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggtcagcccgg 6955684  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  6955685 gcccgtatc 6955693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 10641759 - 10641961
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||| ||    
T  10641759 ggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcc------cggccctatacgggctccc 10641852  T
Q  325 aggctaacgggccagccctggcccgtatttt-ttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |    
T  10641853 gggctaacgggccggccctggcccgtatttttttcttccattttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgg 10641952  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  10641953 gcccgtatc 10641961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 225 - 432
Target Start/End: Complemental strand, 1845812 - 1845612
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |     
T  1845812 ggccgggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaataatgagcccgagcccggccctatacgggctcc- 1845714  T
Q  325 aggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
           |||||| |||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |    
T  1845713 -------cgggccggccctgacccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgg 1845621  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  1845620 gcccgtatc 1845612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 252 - 432
Target Start/End: Original strand, 35038471 - 35038652
Alignment:
Q  252 ggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta 351  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| || |||||||||||| |||||| ||||||    
T  35038471 ggccgggctaaaaagttcggtttgaatatgggctgcaaaaaatgagcccgagcccgaccctatacgggctcccgggctaacgggccggccctgacccgta 35038570  T
Q  352 -ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
     |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||| | ||||||||    
T  35038571 tttttttcttctcttttccattcttttaagtacggaacatacataaatatgccgggctaacgggacagcccggacccgtatc 35038652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 241 - 535
Target Start/End: Original strand, 4970245 - 4970531
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| ||||||||| |||||||||| |||| |||||| |||| ||||   ||||| ||||||||||| |||||||||        ||||||||| |    
T  4970245 gggcttttgagggccgggttaaaaagcccagtttaaatatgagctggaaaattagagcccgagcccggcccaatacgggct--------aacgggccatc 4970336  T
Q  341 cctggcccgtattttttcttcccttttccattcttttaagtacgaaacata--------cataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    ||||||||||||||||| |||| ||||||||||||||||||||  ||||||        ||||||||| |||||||||| ||||| ||| ||||||||||    
T  4970337 cctggcccgtatttttttttcc-ttttccattcttttaagtactgaacatatagaataacataaatataccgggctaacaggccagcccgggcccgtatc 4970435  T
Q  433 tgtannnnnnnn-ccttcccattctttaaggattgaacataataacttaaatatacacaaataggctaatagtgaacaaaagataaattaagatcgatcc 531  Q
    |||          |||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||| |||||    
T  4970436 tgtttttctttttccttcccattctttaaggattgaacagaataacttaaatatacaca--------aatagtgaacaaaagataaattaagattgatcc 4970527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 191 - 357
Target Start/End: Original strand, 33907498 - 33907669
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||     |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33907498 tagagctgtcaaaacgggcggcccgacccgtttaggcccggtccggccgggtcaagggcttttaagggccgggctaaaaagcccgatttaaatatgggct 33907597  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttttt 357  Q
    | |||||  ||||| ||||||| |||| |||||||| ||  |||||||||||||||| ||||| | ||||||    
T  33907598 ggaaaaatagagcccgagcccgaccctttacgggctcccgagctaacgggccagcccaggcccatttttttt 33907669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 244 - 357
Target Start/End: Complemental strand, 31230912 - 31230799
Alignment:
Q  244 cttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccct 343  Q
    ||||| || ||||||||||||| |||||||| ||||||||||| |||||  | ||| ||||||||||||||||||||| || ||||||||||||||||||    
T  31230912 ctttttagagccgggctaaaaaacccggtttaaatatgggctggaaaaatagggcccgagcccggccctatacgggctcccgggctaacgggccagccct 31230813  T
Q  344 ggcccgtatttttt 357  Q
    ||||||| ||||||    
T  31230812 ggcccgtttttttt 31230799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 226 - 357
Target Start/End: Original strand, 3435926 - 3436057
Alignment:
Q  226 gcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcca 325  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||||| ||| |||||  |||||  ||| ||||||| |||||||| ||     
T  3435926 gcccggccgggccaagggcttttaagggtcggactaaaaagcccagtttgaatatggactggaaaaatagagcccaagcgcggccctttacgggctccct 3436025  T
Q  326 ggctaacgggccagccctggcccgtatttttt 357  Q
    |||||||||||||||||  |||||| ||||||    
T  3436026 ggctaacgggccagcccatgcccgtttttttt 3436057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 37205281 - 37205382
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||| || ||  ||||| ||||| ||||||||||||||| || |||||||||||||||    
T  37205281 gggctttttagggccgggctaaaaagcccggtttaaatacgggctgaaataatagagcccgagcctggccctatacgggctcccgggctaacgggccagc 37205380  T
Q  341 cc 342  Q
    ||    
T  37205381 cc 37205382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 244 - 334
Target Start/End: Complemental strand, 75718 - 75628
Alignment:
Q  244 cttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgg 334  Q
    ||||| ||||||||| ||||||||||  ||| |||| |||||| || || |||||| ||||||||||||||||||||| ||||||||||||    
T  75718 ctttttagggccgggttaaaaagccctatttaaataagggctggaataattgagcccgagcccggccctatacgggctcccaggctaacgg 75628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 20337728 - 20337770
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  20337728 tagagctgtcaaaatgggcggcccgacccgtttaggcccggcc 20337770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 17017115 - 17017073
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||||||||||| |||||||||||||||||| ||||||    
T  17017115 tagagctgtcaaaacggacggcccgacccgtttaggtccggcc 17017073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 21151193 - 21151235
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  21151193 tagagctgtcaaaacgggcggcccggcccgtttagggccggcc 21151235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 21158334 - 21158376
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  21158334 tagagctgtcaaaacgggcagcccgacccgtttagggccggcc 21158376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 1845523 - 1845489
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  1845523 ggccaagggcttttacgggccgggctaaaaagccc 1845489  T

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Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 4699929 - 4699963
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  4699929 ggccaagggcttttacgggccgggctaaaaagccc 4699963  T

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Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 6238287 - 6238253
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  6238287 ggccaagggcttttacgggccgggctaaaaagccc 6238253  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 6899997 - 6899963
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  6899997 ggccaagggcttttacgggccgggctaaaaagccc 6899963  T

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Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 6955791 - 6955825
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  6955791 ggccaagggcttttacgggccgggctaaaaagccc 6955825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 9996344 - 9996310
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  9996344 ggccaagggcttttacgggccgggctaaaaagccc 9996310  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 21731818 - 21731784
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  21731818 ggccaagggcttttacgggccgggctaaaaagccc 21731784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 24477388 - 24477354
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  24477388 ggccaagggcttttacgggccgggctaaaaagccc 24477354  T

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Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 35038752 - 35038786
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  35038752 ggccaagggcttttacgggccgggctaaaaagccc 35038786  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 35838212 - 35838178
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  35838212 ggccaagggcttttacgggccgggctaaaaagccc 35838178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 36016375 - 36016341
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  36016375 ggccaagggcttttacgggccgggctaaaaagccc 36016341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 38356025 - 38356059
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  38356025 ggccaagggcttttacgggccgggctaaaaagccc 38356059  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 19646397 - 19646438
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggc 232  Q
    |||||||||||||||||| ||||||| ||||||||| |||||    
T  19646397 tagagctgtcaaaacgggtggcccgatccgtttagggccggc 19646438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 1463722 - 1463690
Alignment:
Q  184 atcttcctagagctgtcaaaacgggcggcccga 216  Q
    |||||| ||||||||||||||||||||||||||    
T  1463722 atcttcttagagctgtcaaaacgggcggcccga 1463690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 2466330 - 2466358
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  2466330 gggcttttaagggccgggctaaaaagccc 2466358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 7344200 - 7344240
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    ||||||||||||||||| |||||||||| ||||||| ||||    
T  7344200 tagagctgtcaaaacggacggcccgacctgtttagggccgg 7344240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 20122793 - 20122765
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  20122793 gggcttttaagggccgggctaaaaagccc 20122765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 26264414 - 26264442
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  26264414 gggcttttaagggccgggctaaaaagccc 26264442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 26507322 - 26507294
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  26507322 gggcttttaagggccgggctaaaaagccc 26507294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 28759394 - 28759422
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  28759394 gggcttttaagggccgggctaaaaagccc 28759422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 38975630 - 38975722
Alignment:
Q  251 gggccgggctaaaaagcccggtttg-aatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    ||||||||| |||||||||||  || ||||||| ||  |||||  ||||| ||||||||||||||||||||| |  |||||||| || |||||    
T  38975630 gggccgggccaaaaagcccggggtgtaatatggactcgaaaaatagagcccgagcccggccctatacgggctcctgggctaacgagctagccc 38975722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 248; Significance: 1e-137; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 190 - 542
Target Start/End: Original strand, 43745831 - 43746192
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 284  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||     ||||||||||||||||||||||||||||||||||||||||||||||    
T  43745831 ctagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 43745930  T
Q  285 tgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtac 383  Q
    ||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43745931 tgcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtac 43746030  T
Q  384 gaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc---tgtannnnnnnnccttcccattctttaaggattgaacataataactta 480  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||   | |         ||||||| ||||||||||||||||||||||||||||    
T  43746031 gaaacatacataaatatgccgggctaacgggccagcccgggcccgtatcagtttttttttttttccttccctttctttaaggattgaacataataactta 43746130  T
Q  481 aatatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  43746131 aatatacacaaataggttaatagtgaacaaaagataaattaagattgatccaagataataac 43746192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 190 - 432
Target Start/End: Complemental strand, 27877973 - 27877726
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 284  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||     ||||||||||||||| ||||||||||||||||||||||||||||||    
T  27877973 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggcccggccgggccaagggcttttaagggtcgggctaaaaagcccggtttgaatatgggc 27877874  T
Q  285 tgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacg 384  Q
    ||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27877873 tgcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacg 27877774  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
     |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  27877773 gaacatacataaatatgtcgggctaacgggccagcccgggcccgtatc 27877726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 191 - 435
Target Start/End: Original strand, 6884246 - 6884495
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  6884246 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 6884345  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttttt--cttcccttttccattcttttaagtac 383  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  6884346 gcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttccttcccttttccattcttttaagtac 6884445  T
Q  384 gaaacatacataaatatgccgggctaacgggccaacccaggcccgtatctgt 435  Q
    |||  |||||||||||| |||||||||||||||| ||| |||||||||||||    
T  6884446 gaa--atacataaatataccgggctaacgggccagcccgggcccgtatctgt 6884495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 190 - 432
Target Start/End: Complemental strand, 46312300 - 46312059
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaa 289  Q
    |||||||||||||||||||||||||| ||||||||||||||||| | ||  ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46312300 ctagagctgtcaaaacgggcggcccggcccgtttaggcccggcccgacc--gggcttttaagggccggactaaaaagcccggtttgaatatgggctgcaa 46312203  T
Q  290 aaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaac 388  Q
    |||||||||| ||||||||||||||||||||| || |||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| |||    
T  46312202 aaaatgagcccgagcccggccctatacgggctcccgggctaacgggccggccctgccccgtatttttttcttcccttttccattcttttaagtacggaac 46312103  T
Q  389 atacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  46312102 atacataaatatgccgggctaacgggccagcccgggcccgtatc 46312059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 192 - 533
Target Start/End: Complemental strand, 33986271 - 33985916
Alignment:
Q  192 agagctgtcaaaacgggcggcccgacccgtttaggc-----ccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctg 286  Q
    |||||||||||||||||||| ||| ||||||||||      |||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33986271 agagctgtcaaaacgggcggtccgtcccgtttaggttcagtccggtcgggccaagggcttttaagggccgggctaaaaagcccggttttaatatgggctg 33986172  T
Q  287 caaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacga 385  Q
    ||||||  ||||| ||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||      
T  33986171 caaaaatagagcccgagcccggccctatacgggctcccggactaacgggccagccctggcccgtatttttttcttcccttttccatt-tttttagtactg 33986073  T
Q  386 aacatacataaatatgccgggctaacgggccaacccaggcccgtatctg--tannnnnnnnccttcccattctttaaggattgaac-------ataataa 476  Q
    ||||||||||||||| ||  |||||||||||| ||||||||||||||||  |         |||||||||||||||||||||||||       |||||||    
T  33986072 aacatacataaatataccaagctaacgggccagcccaggcccgtatctgttttttttttttccttcccattctttaaggattgaacataaattataataa 33985973  T
Q  477 cttaaatatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaa 533  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  33985972 cttaaatatacacaaatagactaatagtgaacaaaagataaattaagattgatccaa 33985916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 228 - 432
Target Start/End: Complemental strand, 46219503 - 46219298
Alignment:
Q  228 ccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccagg 327  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||    
T  46219503 ccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctcccggg 46219404  T
Q  328 ctaacgggccagccctggcccgtat-tttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcc 426  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| ||||    
T  46219403 ctaacgggccggccctggcccgtatgtttttcttcccttttccattcttttaagtacggaacatacataaatatgtcgggctaacgggccagcccgggcc 46219304  T
Q  427 cgtatc 432  Q
    ||||||    
T  46219303 cgtatc 46219298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 252 - 432
Target Start/End: Original strand, 21075611 - 21075792
Alignment:
Q  252 ggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||| | |||||||||||||    
T  21075611 ggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggtcggccctggcccgta 21075710  T
Q  352 -ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  21075711 tttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgggcccgtatc 21075792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 340 - 542
Target Start/End: Complemental strand, 27972530 - 27972321
Alignment:
Q  340 ccctggcccgtatttttt-cttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatctgtann 438  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||| ||||||||||||||      
T  27972530 ccctggcccgtatttttttcttcccttttccattcttttaagtactgaacatacataaatatgccgggctaacgggccagcccgggcccgtatctgtatt 27972431  T
Q  439 nnnnnn------ccttcccattctttaaggattgaacataataacttaaatatacacaaataggctaatagtgaacaaaagataaattaagatcgatcca 532  Q
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27972430 ttatttttttttccttcccattctttaaggattgaacataataacttaaatatacacaaataggctaatagtgaacaaaagataaattaagattgatcca 27972331  T
Q  533 agataataac 542  Q
    ||||||||||    
T  27972330 agataataac 27972321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 191 - 357
Target Start/End: Complemental strand, 43736715 - 43736554
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||  ||||    ||||||||||||||||||||| |||||||||||||||| |||    
T  43736715 tagagctgtcaaaacgggcggcccggcccgtttaagcccggcccggcc--gggcc---aagggccgggctaaaaagcccagtttgaatatgggctggaaa 43736621  T
Q  291 aaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttttt 357  Q
    |   ||||| |||||||||||| |||||||| || ||||||||||||||||| ||||||| ||||||    
T  43736620 agtagagcccgagcccggccctttacgggctcccgggctaacgggccagcccaggcccgtttttttt 43736554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 241 - 340
Target Start/End: Original strand, 50737163 - 50737262
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||| |||||||| || ||||||||| |||||    
T  50737163 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctggaaaaatagagcccgagcccggccctttacgggctcccgggctaacggaccagc 50737262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 241 - 340
Target Start/End: Complemental strand, 50775692 - 50775593
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||| |||||||| || ||||||||| |||||    
T  50775692 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctggaaaaatagagcccgagcccggccctttacgggctcccgggctaacggaccagc 50775593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 235 - 350
Target Start/End: Original strand, 26843529 - 26843644
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgg 334  Q
    ||||||||| |||| |||||||||||||||||||| |||| |||||| |||| |||||  ||| | |||||||||||||||||| || || |||||||||    
T  26843529 ggccaagggatttttagggccgggctaaaaagcccagtttaaatatgtgctggaaaaatagaggccgagcccggccctatacggactcccgggctaacgg 26843628  T
Q  335 gccagccctggcccgt 350  Q
    |||||||||| |||||    
T  26843629 gccagccctgacccgt 26843644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 341
Target Start/End: Complemental strand, 19976501 - 19976416
Alignment:
Q  256 gggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagcc 341  Q
    |||||||||||||| |||| |||||| |||| || |   ||||| ||||||||||||||||||||| || ||||| ||||||||||    
T  19976501 gggctaaaaagcccagtttaaatatgtgctggaatattagagcccgagcccggccctatacgggctcccgggctatcgggccagcc 19976416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 1459732 - 1459774
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  1459732 tagagctgttaaaacgggcggcccgacccgtttagggccggcc 1459774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 29522253 - 29522295
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  29522253 tagagctgtcaaaatgggcggcccgacccgtttagggccggcc 29522295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 51884763 - 51884805
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  51884763 tagagctgtcaaaacgggcggcccgatccgtttagggccggcc 51884805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 11486295 - 11486222
Alignment:
Q  245 ttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgg 318  Q
    |||| ||| ||||||||||||||||||||| |||| |||||| ||  |  ||||| ||||||||||||||||||    
T  11486295 tttttaggaccgggctaaaaagcccggtttaaatacgggctggaatgatagagcccgagcccggccctatacgg 11486222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 36638741 - 36638661
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaa-gggcttttaagggccgggctaaaaagcccggtt 273  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||   | || |||||||   |||||||||||||||||||||||    
T  36638741 tagagctgtcaaaacgggcggtccggcccgtttagggccggcc---ctaacgggctttatcgggccgggctaaaaagcccggtt 36638661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 21390557 - 21390510
Alignment:
Q  295 gagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    ||||| ||||||||||||||||||||| || |||||||||||| ||||    
T  21390557 gagcccgagcccggccctatacgggctcccgggctaacgggccggccc 21390510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 49508006 - 49507963
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||    
T  49508006 ctagagctgtcaaaacgggcggcccggcccgtctagggccggcc 49507963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 21075890 - 21075924
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  21075890 ggccaagggcttttacgggccgggctaaaaagccc 21075924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 27877630 - 27877596
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  27877630 ggccaagggcttttacgggccgggctaaaaagccc 27877596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 43746285 - 43746319
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  43746285 ggccaagggcttttacgggccgggctaaaaagccc 43746319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 46311962 - 46311928
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  46311962 ggccaagggcttttacgggccgggctaaaaagccc 46311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 48912743 - 48912785
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||| ||||||||||||||||| |||||||||| ||||||    
T  48912743 tagagctatcaaaacgggcggcccggcccgtttagggccggcc 48912785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 14740476 - 14740517
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    ||||||||||||||||||||||| |||||| |||||| ||||    
T  14740476 ctagagctgtcaaaacgggcggcacgacccatttagggccgg 14740517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 26319255 - 26319206
Alignment:
Q  243 gcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaa 292  Q
    |||||| ||||||||||||||||| | ||||| ||||||||||| |||||    
T  26319255 gcttttgagggccgggctaaaaagtctggtttaaatatgggctggaaaaa 26319206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 35603282 - 35603323
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    |||||||||||||||||||||||||  |||||||||| ||||    
T  35603282 ctagagctgtcaaaacgggcggcccagcccgtttaggaccgg 35603323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 41208840 - 41208869
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgaccc 219  Q
    ||||||||||||||||||||||||||||||    
T  41208840 ctagagctgtcaaaacgggcggcccgaccc 41208869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 7399789 - 7399761
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  7399789 gggcttttaagggccgggctaaaaagccc 7399761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 7910187 - 7910215
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  7910187 gggcttttaagggccgggctaaaaagccc 7910215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 9300523 - 9300551
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgaccc 219  Q
    |||||||||||||||||||||||||||||    
T  9300523 tagagctgtcaaaacgggcggcccgaccc 9300551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 9301089 - 9301117
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  9301089 gggcttttaagggccgggctaaaaagccc 9301117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 10267927 - 10267899
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  10267927 gggcttttaagggccgggctaaaaagccc 10267899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 10804565 - 10804593
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  10804565 gggcttttaagggccgggctaaaaagccc 10804593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 20511331 - 20511246
Alignment:
Q  255 cgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    |||| |||||| |||  ||| |||| |||||| || || |||||||||||| |  |||||||||||| || |||||||||||||||||    
T  20511331 cgggttaaaaaaccctatttaaataagggctggaataattgagcctgagccgg--cctatacgggctcccgggctaacgggccagccc 20511246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 26823106 - 26823078
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  26823106 gggcttttaagggccgggctaaaaagccc 26823078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 43088057 - 43088029
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  43088057 gggcttttaagggccgggctaaaaagccc 43088029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 191 - 542
Target Start/End: Original strand, 30436014 - 30436373
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  30436014 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 30436113  T
Q  286 gcaaaaaa-tgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttt-ttcttcccttttccattcttttaagtac 383  Q
    |||||||| |||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30436114 gcaaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtac 30436213  T
Q  384 gaaacatacataaatatgccgggctaacgggccaacccaggcccgtatctg-tannnnnnnnccttcccattctttaaggattgaacataataacttaaa 482  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||| | |         ||||||| ||||||||||||||||||||||||||||||    
T  30436214 gaaacatacataaatatgccgggctaacgggccagcccgggcccgtatcagtttttttttttccttccctttctttaaggattgaacataataacttaaa 30436313  T
Q  483 tatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  30436314 tatacacaaataggttaatagtgaacaaaagataaattaagattgatccaagataataac 30436373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 191 - 542
Target Start/End: Original strand, 35812982 - 35813343
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     ||||||||||||||||||||||||||||||| |||||||||||||||    
T  35812982 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccagtttgaatatgggct 35813081  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35813082 gcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtacg 35813181  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc----tgtannnnnnnnccttcccattctttaaggattgaacataataactta 480  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||    | |         ||||||| || |||||||||||||||||||||||||    
T  35813182 aaacatacataaatatgccgggctaacgggccagcccgggcccgtatcagttttttttttttttccttccctttttttaaggattgaacataataactta 35813281  T
Q  481 aatatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    ||| |||||||||||| ||||||||||||||| |||| |||| || ||||||||||||||||    
T  35813282 aatttacacaaataggttaatagtgaacaaaaaataatttaaaattgatccaagataataac 35813343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 225 - 432
Target Start/End: Complemental strand, 3941071 - 3940863
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  3941071 ggcctggccgggccaagggcttttaagggccgggctaaaaagcccagtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctccc 3940972  T
Q  325 aggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |    
T  3940971 gggctaacgggccggccctggcccgtatttttttctttccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgg 3940872  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  3940871 gcccgtatc 3940863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 191 - 407
Target Start/End: Original strand, 3653974 - 3654196
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcc-----cggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||     ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3653974 tagagctgtcaaaacgggcggcccggcccgtttaggcctggcccggccgggccaagggattttaagggccgggctaaaaagcccggtttgaatatgggct 3654073  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| || ||||||||||||| |||| || |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3654074 gcaaaaaatgagcccgatcccggccctatacaggctcccgggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacg 3654173  T
Q  385 aaacatacataaatatgccgggc 407  Q
     ||||||||||||||||||||||    
T  3654174 gaacatacataaatatgccgggc 3654196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 184 - 435
Target Start/End: Original strand, 42738501 - 42738751
Alignment:
Q  184 atcttcctagagctgtcaaaacgggcggcccgacccgtttaggcccg-----gccaggccaagggcttttaagggccgggctaaaaagcccggtttgaat 278  Q
    |||||| ||||||||||||||||||||||| | ||||||||||||||     | | ||||||||||||||||||||||||||||||||||||||||||||    
T  42738501 atcttcgtagagctgtcaaaacgggcggcctggcccgtttaggcccgatccggtcgggccaagggcttttaagggccgggctaaaaagcccggtttgaat 42738600  T
Q  279 atgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttt-ttcttcccttttccattctttt 377  Q
    |||||||| |||||  |||||       ||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42738601 atgggctgtaaaaatagagcc-------ggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattctttt 42738693  T
Q  378 aagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatctgt 435  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  42738694 aagtactaaacatacataaatatgccgggctaacgggccagcccgggcccgtatctgt 42738751  T

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Target: chr8; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 23221729 - 23221920
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggc-----caagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 284  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||| |||     ||||||||||||||||||||||||||||||||||||| |||||||||    
T  23221729 ctagagctgtcaatacgggcagcccggcccgtttaggcccggcccggcggggccaagggcttttaagggccgggctaaaaagcccggtttcaatatgggc 23221828  T
Q  285 tgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtat-tttttcttcccttttccattctt 375  Q
    ||||||||||||||| |||||| |||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  23221829 tgcaaaaaatgagcccgagccccgccctatacgggctcccgggctaacgggccatccctggcccgtatgtttttcttcccttttccattctt 23221920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 190 - 337
Target Start/End: Complemental strand, 2350562 - 2350410
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 284  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||     | ||||||||  || ||||||| ||||||||| ||| |||||||||    
T  2350562 ctagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggtaacgggctttttcggaccgggctgaaaagcccgatttaaatatgggc 2350463  T
Q  285 tgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggcc 337  Q
     | || || |||||| |||||||||||||||| |||| || ||||||||||||    
T  2350462 gggaataattgagcccgagcccggccctatacaggctcccgggctaacgggcc 2350410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 245 - 342
Target Start/End: Complemental strand, 15244697 - 15244600
Alignment:
Q  245 ttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    |||| ||||||||||||||||||||||||| ||||||||||  |||||  ||||| ||| |||||||||||||||||||| |||||||||||||||||    
T  15244697 tttttagggccgggctaaaaagcccggtttaaatatgggctaaaaaaatagagcccgagtccggccctatacgggcttccgggctaacgggccagccc 15244600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 344
Target Start/End: Complemental strand, 28969043 - 28968942
Alignment:
Q  243 gcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    |||||||||||||||||| |||||||  |||||||||||||||| |||||  ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  28969043 gcttttaagggccgggctgaaaagccttgtttgaatatgggctggaaaaatagagcccgagcccggccctgtacgggcttccgggctaacgagccagccc 28968944  T
Q  343 tg 344  Q
    ||    
T  28968943 tg 28968942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 45450896 - 45450976
Alignment:
Q  244 cttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||| |||||||||||||||||||| |||||||||||||||| || ||  ||||| ||||| ||||||||||||||||||    
T  45450896 ctttttagggccgggctaaaaagccctgtttgaatatgggctggaataatggagcccgagcctggccctatacgggcttcc 45450976  T

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Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 6143611 - 6143510
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| |||| |||||| ||||||||| ||| |||| ||| || || ||  ||||| |||||||||||||||| |||| || |||||||||||||||    
T  6143611 gggctttttagggtcgggctgaaaagcccgatttaaatacgggatgaaataatagagcccgagcccggccctatacaggctcccgggctaacgggccagc 6143512  T
Q  341 cc 342  Q
    ||    
T  6143511 cc 6143510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 32018983 - 32018941
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  32018983 tagagctgtcaaaacgggcggcccggcccgtttagggccggcc 32018941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 38895333 - 38895291
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  38895333 tagagctgtcaaaacgggcggcccggcccgtttagggccggcc 38895291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 5913980 - 5913945
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttagg 226  Q
    ||||||||||||||||||||||||| ||||||||||    
T  5913980 tagagctgtcaaaacgggcggcccggcccgtttagg 5913945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 9201804 - 9201726
Alignment:
Q  243 gcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    |||||| |||||||| || ||||| ||||||| |||| |||||| || ||  ||||| |||| ||||||||||||||||    
T  9201804 gctttttagggccggactgaaaagtccggtttaaatacgggctgaaataatagagcccgagctcggccctatacgggct 9201726  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 30436466 - 30436500
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  30436466 ggccaagggcttttacgggccgggctaaaaagccc 30436500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 35813435 - 35813469
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  35813435 ggccaagggcttttacgggccgggctaaaaagccc 35813469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 5927167 - 5927139
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  5927167 gggcttttaagggccgggctaaaaagccc 5927139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 6266360 - 6266332
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  6266360 gggcttttaagggccgggctaaaaagccc 6266332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 7433498 - 7433470
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  7433498 gggcttttaagggccgggctaaaaagccc 7433470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 11202211 - 11202239
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  11202211 gggcttttaagggccgggctaaaaagccc 11202239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 15041424 - 15041396
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  15041424 gggcttttaagggccgggctaaaaagccc 15041396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 24101209 - 24101237
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgaccc 219  Q
    |||||||||||||||||||||||||||||    
T  24101209 tagagctgtcaaaacgggcggcccgaccc 24101237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 24101777 - 24101805
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  24101777 gggcttttaagggccgggctaaaaagccc 24101805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 26098362 - 26098334
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  26098362 gggcttttaagggccgggctaaaaagccc 26098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 27640048 - 27640076
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  27640048 gggcttttaagggccgggctaaaaagccc 27640076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 31894964 - 31894992
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  31894964 gggcttttaagggccgggctaaaaagccc 31894992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 37819300 - 37819272
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  37819300 gggcttttaagggccgggctaaaaagccc 37819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 38231757 - 38231785
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  38231757 gggcttttaagggccgggctaaaaagccc 38231785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 40027833 - 40027805
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  40027833 gggcttttaagggccgggctaaaaagccc 40027805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 41377767 - 41377739
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgaccc 219  Q
    |||||||||||||||||||||||||||||    
T  41377767 tagagctgtcaaaacgggcggcccgaccc 41377739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 41827583 - 41827611
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  41827583 gggcttttaagggccgggctaaaaagccc 41827611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 243; Significance: 1e-134; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 191 - 542
Target Start/End: Complemental strand, 10993747 - 10993385
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  10993747 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 10993648  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10993647 gcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtacg 10993548  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc-----tgtannnnnnnnccttcccattctttaaggattgaacataataactt 479  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||     | |         ||||||| |||||||||||||||||||||||||||    
T  10993547 aaacatacataaatatgccgggctaacgggccagcccgggcccgtatctagttttttttttttttccttccctttctttaaggattgaacataataactt 10993448  T
Q  480 aaatatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  10993447 aaatatacacaaataggttaatagtgaacaaaagataaattaagattgatccaagataataac 10993385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 191 - 511
Target Start/End: Original strand, 39489006 - 39489324
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     ||||||||||||||||||||             ||||||||||||||    
T  39489006 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccggg-------------tttgaatatgggct 39489092  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacga 385  Q
    |||||||||||||| |||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39489093 gcaaaaaatgagcccgagcccggccctcttcgggctcccgggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacaa 39489192  T
Q  386 aacatacataaatatgccgggctaacgggccaacccaggcccgtatctgta--nnnnnnnnccttcccattctttaaggattgaacataataacttaaat 483  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  39489193 aacatacataaatatgccgggctaacgggccagcccgggcccgtatctgtattttttttttccttcccattctttaaggattgaacataataacttaaat 39489292  T
Q  484 atacac----aaataggctaatagtgaacaaa 511  Q
    ||||||    ||||||||||||||||||||||    
T  39489293 atacacaaataaataggctaatagtgaacaaa 39489324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 225 - 432
Target Start/End: Complemental strand, 1874048 - 1873840
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  1874048 ggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctccc 1873949  T
Q  325 aggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||      
T  1873948 gggctaacgggccggccctggcctgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccga 1873849  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  1873848 gcccgtatc 1873840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 235 - 417
Target Start/End: Complemental strand, 23025555 - 23025372
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgg 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||    
T  23025555 ggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgg 23025456  T
Q  335 gccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggcca 417  Q
    ||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  23025455 gccggccctggcccgtatttttttcttcccttttccattattttaagtacggaacatacataaatatgccgggctaacgggcca 23025372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 326 - 432
Target Start/End: Complemental strand, 16526489 - 16526383
Alignment:
Q  326 ggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggc 425  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| |||    
T  16526489 ggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacggaacatacataaatatgtcgggctaacgggccagcccgggc 16526390  T
Q  426 ccgtatc 432  Q
    |||||||    
T  16526389 ccgtatc 16526383  T

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Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 191 - 357
Target Start/End: Original strand, 17471288 - 17471454
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || || |||    
T  17471288 tagagctgtcaaaacgggcggccctgcccttttaggcccggccgggccaagggcttttaagggccgggctaaaaagtccggtttgaatataggttggaaa 17471387  T
Q  291 aaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttttt 357  Q
    ||  ||||| |||||||||||| ||||| || || ||||||||  ||||| | ||||||| ||||||    
T  17471388 aatagagcccgagcccggccctttacggactcccgggctaacgtaccagcacaggcccgtttttttt 17471454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 191 - 357
Target Start/End: Complemental strand, 17581926 - 17581760
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || || |||    
T  17581926 tagagctgtcaaaacgggcggccctgcccttttaggcccggccgggccaagggcttttaagggccgggctaaaaagtccggtttgaatataggttggaaa 17581827  T
Q  291 aaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttttt 357  Q
    ||  ||||| |||||||||||| ||||| || || ||||||||  ||||| | ||||||| ||||||    
T  17581826 aatagagcccgagcccggccctttacggactcccgggctaacgtaccagcacaggcccgtttttttt 17581760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 16526624 - 16526514
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    |||||||||||||| |||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||| ||||||    
T  16526624 tagagctgtcaaaatgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaat-tgggct 16526526  T
Q  286 gcaaaaaatgag 297  Q
    ||||||||||||    
T  16526525 gcaaaaaatgag 16526514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 4267748 - 4267652
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||| ||||||||    
T  4267748 ggcccggccgggccaagggcttttaagggtcgggctaaaaagcccggtttgaatatgggctggaaaaatagagcccgagcccggccctttacgggct 4267652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 245 - 357
Target Start/End: Complemental strand, 49113439 - 49113327
Alignment:
Q  245 ttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctg 344  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||  ||||| |||||||||||| |||||||| || ||||||||||||||||| |    
T  49113439 ttttaagggccgggctaaaaaatccggtttgaatatgggctggaaaaatagagcccgagcccggccctttacgggctcccgggctaacgggccagcccag 49113340  T
Q  345 gcccgtatttttt 357  Q
    |||||| ||||||    
T  49113339 gcccgtttttttt 49113327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 249 - 361
Target Start/End: Complemental strand, 41202690 - 41202576
Alignment:
Q  249 aagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggccc 348  Q
    |||| |||| |||||||||||||||||||||||||||| |||||  ||||| |||||||||||| |||| ||| || ||||||||||||||||| |||||    
T  41202690 aaggaccggactaaaaagcccggtttgaatatgggctggaaaaatagagcccgagcccggccctttacgagctcccgggctaacgggccagcccaggccc 41202591  T
Q  349 g--tattttttcttc 361  Q
    |  ||||||||||||    
T  41202590 gtttattttttcttc 41202576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 35710676 - 35710575
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| ||||||||||||||||||||  ||| |||| |||||| || || |||||| ||||||||||||||||||||| || |||||||||||||||    
T  35710676 gggctttttagggccgggctaaaaagccctatttaaataagggctggaataattgagcccgagcccggccctatacgggctcccgggctaacgggccagc 35710577  T
Q  341 cc 342  Q
    ||    
T  35710576 cc 35710575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 31271522 - 31271623
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    ||||||||  |||||||||||||||| ||||||| |||| |||||| || |   ||||| ||||||||||||||||||||| || ||||| |||||||||    
T  31271522 gggctttttcgggccgggctaaaaagtccggtttaaatacgggctgaaatattagagcccgagcccggccctatacgggctcccgggctatcgggccagc 31271621  T
Q  341 cc 342  Q
    ||    
T  31271622 cc 31271623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 338
Target Start/End: Complemental strand, 19106693 - 19106606
Alignment:
Q  251 gggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggcca 338  Q
    |||| ||||| || ||||||| || ||||||||||| || || |||||| |||||||| |||||||||||| || |||||||||||||    
T  19106693 gggctgggctgaatagcccggcttaaatatgggctggaataattgagcccgagcccggtcctatacgggctcccgggctaacgggcca 19106606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 40921240 - 40921283
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  40921240 ctagagctgtcaaaacgggcggcccgacccgtttagggccggcc 40921283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 16526515 - 16526463
Alignment:
Q  379 agtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtat 431  Q
    |||||| |||||||||||||||| ||||||||||||||| ||| |||||||||    
T  16526515 agtacggaacatacataaatatgtcgggctaacgggccagccctggcccgtat 16526463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 1873740 - 1873706
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  1873740 ggccaagggcttttacgggccgggctaaaaagccc 1873706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 10993291 - 10993257
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  10993291 ggccaagggcttttacgggccgggctaaaaagccc 10993257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 7505948 - 7505880
Alignment:
Q  253 gccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    ||||||||||||||||| |||| |||| |||||| || |   ||||| |||| ||||||||||||||||    
T  7505948 gccgggctaaaaagccctgtttaaatacgggctggaatattagagcccgagctcggccctatacgggct 7505880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 8613841 - 8613813
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  8613841 gggcttttaagggccgggctaaaaagccc 8613813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 15456689 - 15456717
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacc 218  Q
    |||||||||||||||||||||||||||||    
T  15456689 ctagagctgtcaaaacgggcggcccgacc 15456717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 24764279 - 24764251
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  24764279 gggcttttaagggccgggctaaaaagccc 24764251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 31326020 - 31325980
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    
T  31326020 tagagttgtcaaaacgggcggcccgaccagtttagggccgg 31325980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 32795802 - 32795774
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  32795802 gggcttttaagggccgggctaaaaagccc 32795774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 33889846 - 33889806
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    ||||| ||||||||||||||||||||||| |||||| ||||    
T  33889846 tagagttgtcaaaacgggcggcccgacccatttagggccgg 33889806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 34182095 - 34182123
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  34182095 gggcttttaagggccgggctaaaaagccc 34182123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 34202684 - 34202712
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  34202684 gggcttttaagggccgggctaaaaagccc 34202712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 37471547 - 37471575
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  37471547 gggcttttaagggccgggctaaaaagccc 37471575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 47761712 - 47761740
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  47761712 gggcttttaagggccgggctaaaaagccc 47761740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 225 - 542
Target Start/End: Complemental strand, 17544268 - 17543947
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  17544268 ggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctccc 17544169  T
Q  325 aggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  17544168 gggctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccagcccgg 17544069  T
Q  424 gcccgtatc---tgtannnnnnnnccttcccattctttaaggattgaacataataacttaaatatacacaaataggctaatagtgaacaaaagataaatt 520  Q
    |||||||||   | |         ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17544068 gcccgtatcagtttttttttttttccttccctttctttaaggattgaacataataacttaaatatacacaaataggttaatagtgaacaaaagataaatt 17543969  T
Q  521 aagatcgatccaagataataac 542  Q
    ||||| ||||||||||||||||    
T  17543968 aagattgatccaagataataac 17543947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 191 - 432
Target Start/End: Complemental strand, 47296016 - 47295774
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47296016 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 47295917  T
Q  291 aaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaaca 389  Q
    ||||||||| ||||||||||||||||||||  || |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  47295916 aaatgagcccgagcccggccctatacgggcccccgggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaaca 47295817  T
Q  390 tacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  47295816 tacataaatatgccgggctaacgggccagcccgggcccgtatc 47295774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 191 - 432
Target Start/End: Complemental strand, 45522939 - 45522697
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  45522939 tagagctgtcaaaacgggcggcccgccccgtttaggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatggattgcaaa 45522840  T
Q  291 aaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaaca 389  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  45522839 aaatgagcccgagcccggccctatacgggctcccaggctaatgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaaca 45522740  T
Q  390 tacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  45522739 tacataaatatgccgggctaacgggccagcccgggcccgtatc 45522697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 190 - 432
Target Start/End: Complemental strand, 951810 - 951562
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 284  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||     ||||||||||||||||||||||||||||||||||||||||||||||    
T  951810 ctagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 951711  T
Q  285 tgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtac 383  Q
    ||||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  951710 tgcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtac 951611  T
Q  384 gaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  951610 ggaacatacataaatatgtcgggctaacgggccagcccgggcccgtatc 951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 191 - 432
Target Start/End: Complemental strand, 27870448 - 27870206
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27870448 tagagctgtcaaaatgggcggcccgacccgtttaggcccgaccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggccgcaaa 27870349  T
Q  291 aaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaaca 389  Q
    ||||||||| ||||||||||||||||||||| || |||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| ||||    
T  27870348 aaatgagcccgagcccggccctatacgggctcccgggctgacgggccggccctgacccgtatttttttcttcccttttccattcttttaagtacggaaca 27870249  T
Q  390 tacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    |||||||||||||||| ||||||||||| ||  ||||||||||    
T  27870248 tacataaatatgccggactaacgggccagcctgggcccgtatc 27870206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 191 - 432
Target Start/End: Original strand, 20033949 - 20034196
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  20033949 tagagctgtcaaaacgggcggcccggcccgtttagccccggccgggccgggtcaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 20034048  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||    
T  20034049 gcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacggcccggccctggcccgtatttttttcttcccttttccattcttttaagtacg 20034148  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
     |||||||||||||||||||||||||||||||| ||| | ||||||||    
T  20034149 gaacatacataaatatgccgggctaacgggccagcccggacccgtatc 20034196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 190 - 533
Target Start/End: Original strand, 3409789 - 3410112
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaa 289  Q
    ||||||||||||||||||||||||||  |||     |||||||  || ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3409789 ctagagctgtcaaaacgggcggcccggtccg-----gcccggctgggtcaagggcttttaagggccgggctaaaaagcctggtttgaatatgggctgcaa 3409883  T
Q  290 aaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttt-ttcttcccttttccattcttttaagtacgaaac 388  Q
    |||  ||||| |||||||||||||||||||||        |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||    
T  3409884 aaatagagcccgagcccggccctatacgggct--------aacgggccagccctggcccgtatttttttcttccattttccattcttttaagtactgaac 3409975  T
Q  389 atacataaatatgccgggctaacgggccaacccaggcccgtatctgtannnnnnnnccttcccattctttaaggattgaacataataacttaaatataca 488  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  3409976 atacataaatatgtcgggctaacgggctagcccaggcccgtatctgtattttttttccttcccattctttaaggattgaacataataacttaaatataca 3410075  T
Q  489 caaataggctaatagtgaacaaaagataaattaagatcgatccaa 533  Q
    ||        ||||||||||||||||||||||||||| |||||||    
T  3410076 ca--------aatagtgaacaaaagataaattaagattgatccaa 3410112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 191 - 431
Target Start/End: Original strand, 43285413 - 43285659
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccagg-----ccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43285413 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggacgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 43285512  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacg 384  Q
    |||||||  ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  43285513 gcaaaaatagagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtact 43285612  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtat 431  Q
     |||||||||||||||||| ||||||||| ||| ||| |||||||||    
T  43285613 gaacatacataaatatgccaggctaacggaccagcccgggcccgtat 43285659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 191 - 435
Target Start/End: Original strand, 52463235 - 52463485
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccag-----gccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |     ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  52463235 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccgatcgggccaagggcttttaagggccgggctaaaaagcccgatttgaatatgggct 52463334  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacg 384  Q
    |||||||  ||||| ||||||||||||||||||||| || ||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||     
T  52463335 gcaaaaatagagcccgagcccggccctatacgggctcccgggctaacgggccagccctgccccgtatttttttcttccctttttcattcttttaagtact 52463434  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatctgt 435  Q
     |||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  52463435 gaacatacataaatatgccgggctaacgggccagcccgggcccgtatctgt 52463485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 237 - 432
Target Start/End: Original strand, 2323507 - 2323703
Alignment:
Q  237 ccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggc 336  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |||||| ||||    
T  2323507 ccaagggcttttaagggtcgggctaaaaaacccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctcccgggctaatgggc 2323606  T
Q  337 cagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| | ||||||||    
T  2323607 cagccctggcccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgtcgggctaacgggccagcccggacccgtatc 2323703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 54134196 - 54134402
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccg------gccctatacgg 318  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||      |||||||||||    
T  54134196 ggcccggccgggccaagggctttcaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccgagcccggccctatacgg 54134295  T
Q  319 gcttccaggctaacgggccagccctggcccgtatttt-ttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggcca 417  Q
    |||        |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  54134296 gct--------aacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgtcgggctaacgggcca 54134387  T
Q  418 acccaggcccgtatc 432  Q
     ||| ||||||||||    
T  54134388 gcccgggcccgtatc 54134402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 191 - 321
Target Start/End: Complemental strand, 32594929 - 32594799
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||| ||  | ||||||||  |||||||||| ||||||||||||| ||||||||||| ||     
T  32594929 tagagctgtcaaaacggacggcccggcccgtttaggctcggccgggtaacgggctttttcgggccgggctgaaaagcccggtttaaatatgggctggaat 32594830  T
Q  291 aaatgagcctgagcccggccctatacgggct 321  Q
    || |||||  |||||||||||||||||||||    
T  32594829 aattgagctcgagcccggccctatacgggct 32594799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 191 - 435
Target Start/End: Complemental strand, 32768530 - 32768283
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccag-----gccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |     || | || ||||| ||||||||||||||||||||| ||| |||||||||     
T  32768530 tagagctgtcaaaacgggcggtccggcccgtttaggcccggcccgaacgggcaacggacttttgagggccgggctaaaaagcccgatttaaatatgggcc 32768431  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacga 385  Q
      |||||  ||||| |||| |||||||||||||||| || ||||||||        |||||||||||||||  || ||||||||||||||||| ||||      
T  32768430 tgaaaaatagagcccgagcacggccctatacgggctcccgggctaacg--------ctggcccgtattttt--tttccttttccattcttttacgtactg 32768341  T
Q  386 aacat--------acataaatatgccgggctaacgggccaacccaggcccgtatctgt 435  Q
    |||||        |||||||||| |||||||||||||||| ||  |||||||||||||    
T  32768340 aacatataaaataacataaatataccgggctaacgggccagcctgggcccgtatctgt 32768283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 243 - 344
Target Start/End: Original strand, 34858316 - 34858417
Alignment:
Q  243 gcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    |||||||||||||||||| |||||||  |||||||||||||||| |||||  ||||| |||||||||||| ||||||||||| |||||||| ||||||||    
T  34858316 gcttttaagggccgggctgaaaagccttgtttgaatatgggctggaaaaatagagcccgagcccggccctgtacgggcttccgggctaacgagccagccc 34858415  T
Q  343 tg 344  Q
    ||    
T  34858416 tg 34858417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 44341870 - 44341773
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggcca 338  Q
    |||||||| ||| ||||||| ||||||||||||| |||| |||||| || ||  ||||| ||||||||||||||||||||| || |||||||||||||    
T  44341870 gggctttttaggaccgggctgaaaagcccggtttaaatacgggctgaaataatagagcccgagcccggccctatacgggctcccgggctaacgggcca 44341773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 16030546 - 16030487
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaat 294  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  16030546 ggccaagggcttttaaggaacgggctaaaaagcccggtttgaatatgggctggaaaaaat 16030487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 284
Target Start/End: Complemental strand, 50005587 - 50005493
Alignment:
Q  194 agctgtcaaaacgggcggcccgacccgtttaggcccggcc-----aggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 284  Q
    |||||||||||||  || ||||||||||||||||||||||     || |||||||||||| ||||||||||| ||||| ||||||| |||||||||    
T  50005587 agctgtcaaaacga-cgacccgacccgtttaggcccggcctgaccagcccaagggctttttagggccgggctgaaaagtccggtttaaatatgggc 50005493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 342
Target Start/End: Original strand, 7137677 - 7137763
Alignment:
Q  256 gggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    ||||||||||| || ||||||||||| |||| || ||  ||| ||||||||||||||||||||||| || || |||||| |||||||    
T  7137677 gggctaaaaagtcctgtttgaatatgtgctgaaataatcgagtctgagcccggccctatacgggctcccgggttaacggaccagccc 7137763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 233
Target Start/End: Original strand, 41882604 - 41882647
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  41882604 ctagagctgtcaaaacgggcggcccggcccgtttagggccggcc 41882647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 9454506 - 9454586
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    |||||||  |||||||||||||||| |||| ||| |||||||| || || || |||||| |||||| |||||||| |||||    
T  9454506 gggctttgcagggccgggctaaaaaacccgatttaaatatgggttggaataattgagcccgagcccagccctatatgggct 9454586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 19823063 - 19823103
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  19823063 tagagctgtcaaaacgggcggtccgacccgtttagggccgg 19823103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 31615960 - 31616000
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  31615960 tagagctgtcaaaacgggcggaccgacccgtttaggaccgg 31616000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 44857025 - 44857105
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    |||| ||| ||| ||||||||| ||||||||||| |||| |||||| || ||  || | ||||||||||||||||||||||    
T  44857025 gggcattttaggaccgggctaataagcccggtttaaatacgggctggaataatagatcttgagcccggccctatacgggct 44857105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 269
Target Start/End: Complemental strand, 951487 - 951444
Alignment:
Q  226 gcccggccaggccaagggcttttaagggccgggctaaaaagccc 269  Q
    |||||| | ||||||||||||||| |||||||||||||||||||    
T  951487 gcccggacgggccaagggcttttacgggccgggctaaaaagccc 951444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 16624143 - 16624100
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    |||||||||||||||||||||||||| ||||||| || ||||||    
T  16624143 ctagagctgtcaaaacgggcggcccggcccgtttggggccggcc 16624100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 52278249 - 52278284
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttagg 226  Q
    ||||||||||||||||||||||||||||| ||||||    
T  52278249 tagagctgtcaaaacgggcggcccgacccatttagg 52278284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 1324083 - 1324161
Alignment:
Q  243 gcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    |||||| |||||||| || ||||||||||||||||||||  ||  |||||  ||||| ||| | |||||||||||||||    
T  1324083 gctttttagggccggactgaaaagcccggtttgaatatgaacttgaaaaatggagcccgagtctggccctatacgggct 1324161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 17543853 - 17543819
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  17543853 ggccaagggcttttacgggccgggctaaaaagccc 17543819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 20034300 - 20034334
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  20034300 ggccaagggcttttacgggccgggctaaaaagccc 20034334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 27870127 - 27870093
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  27870127 ggccaagggcttttacgggccgggctaaaaagccc 27870093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 34031091 - 34031045
Alignment:
Q  295 gagcctgagcccggccctatacgggcttccaggctaacgggccagcc 341  Q
    ||||| |||||||||||||||| |||| || ||||||||||||||||    
T  34031091 gagcccgagcccggccctatacaggctcccgggctaacgggccagcc 34031045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 39345937 - 39345903
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  39345937 ggccaagggcttttacgggccgggctaaaaagccc 39345903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 47295669 - 47295635
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  47295669 ggccaagggcttttacgggccgggctaaaaagccc 47295635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 54134494 - 54134528
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  54134494 ggccaagggcttttacgggccgggctaaaaagccc 54134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 1324041 - 1324070
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccg 220  Q
    ||||||||||||||||||||||||||||||    
T  1324041 tagagctgtcaaaacgggcggcccgacccg 1324070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 1704507 - 1704564
Alignment:
Q  255 cgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccct 312  Q
    |||||| |||||||| |||||||||||||||| |||||  ||||| |||||| |||||    
T  1704507 cgggctgaaaagccctgtttgaatatgggctggaaaaatagagcccgagcccagccct 1704564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 15194567 - 15194539
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  15194567 gggcttttaagggccgggctaaaaagccc 15194539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 26706354 - 26706382
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgaccc 219  Q
    |||||||||||||||||||||||||||||    
T  26706354 tagagctgtcaaaacgggcggcccgaccc 26706382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 39240456 - 39240484
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  39240456 gggcttttaagggccgggctaaaaagccc 39240484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 39809650 - 39809678
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  39809650 gggcttttaagggccgggctaaaaagccc 39809678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 40731233 - 40731261
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  40731233 gggcttttaagggccgggctaaaaagccc 40731261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 41362056 - 41361976
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    |||||||| | |||||||||||| | |||  ||| |||| |||||| || || |||||| |||||||||||||||| ||||    
T  41362056 gggctttttaaggccgggctaaacatccctatttaaataagggctggaataattgagcccgagcccggccctatacaggct 41361976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 267
Target Start/End: Complemental strand, 45522605 - 45522573
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagc 267  Q
    ||||||||||||||| |||||||||||||||||    
T  45522605 ggccaagggcttttacgggccgggctaaaaagc 45522573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 51435606 - 51435634
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  51435606 gggcttttaagggccgggctaaaaagccc 51435634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 53724951 - 53724923
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  53724951 gggcttttaagggccgggctaaaaagccc 53724923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 56264435 - 56264463
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  56264435 gggcttttaagggccgggctaaaaagccc 56264463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 218; Significance: 1e-119; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 191 - 511
Target Start/End: Original strand, 9780 - 10112
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  9780 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 9879  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacga 385  Q
    |||||||||||||| |||||||||||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9880 gcaaaaaatgagcccgagcccggccctcttcgggctcccgggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacaa 9979  T
Q  386 aacatacataaatatgccgggctaacgggccaacccaggcccgtatctgta---nnnnnnnnccttcccattctttaaggattgaacataataacttaaa 482  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||           ||||||||||||||||||||||||||||||||||||||    
T  9980 aacatacataaatatgccgggctaacgggccagcccgggcccgtatctgtatttttttttttccttcccattctttaaggattgaacataataacttaaa 10079  T
Q  483 tatacac----aaataggctaatagtgaacaaa 511  Q
    |||||||    ||||||||||||||||||||||    
T  10080 tatacacaaataaataggctaatagtgaacaaa 10112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 208; Significance: 1e-113; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 190 - 542
Target Start/End: Complemental strand, 26520013 - 26519653
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 284  Q
    ||||||||||||||||||| |||| | ||||||||||||||||| ||||     ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  26520013 ctagagctgtcaaaacgggtggcctggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggcgaaaaagcccagtttgaatatgggc 26519914  T
Q  285 tgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtac 383  Q
    ||||||||  ||||| ||||||| ||||||||||| | || |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  26519913 tgcaaaaatagagcccgagcccgaccctatacgggttcccgggctaacgggccagccctggcccgtatttttttcttctcttttccattcttttaagtac 26519814  T
Q  384 gaaacatacataaatatgccgggctaacgggccaacccaggcccgtatctg---tannnnnnnnccttcccattctttaaggattgaacataataactta 480  Q
      |||||||||||||||||| ||||||||||||| ||| ||||||||||||   ||        ||||||||||||||||||||||||||||||||||||    
T  26519813 tgaacatacataaatatgcc-ggctaacgggccagcccgggcccgtatctgtattattttttttccttcccattctttaaggattgaacataataactta 26519715  T
Q  481 aatatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  26519714 aatatacacaaataggctaatagtgaacaaaagataaattaagattgatccaagagaataac 26519653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 251 - 542
Target Start/End: Original strand, 31470975 - 31471272
Alignment:
Q  251 gggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgt 350  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  31470975 gggccgggctaaaaagcccgatttgaatatgggctgcaaaaatagagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgt 31471074  T
Q  351 a-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatctg-----tannnnnnnn 444  Q
    | ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||| | ||||||||||     ||            
T  31471075 atttttttcttcccttttccattcttttaagtactgaacatacataaatatgccgggctaacgggccagcccggacccgtatctgttttttatttttttt 31471174  T
Q  445 ccttcccattctttaaggattgaacataataacttaaatatacacaaataggctaatagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  31471175 ccttcccattctttaaggattgaagataataacttaaatatacacaaataggctaatagtgaacaaaagataaattaagattgatccgagagaataac 31471272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 191 - 432
Target Start/End: Original strand, 11369202 - 11369450
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcc-----cggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||     ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11369202 tagagctgtcaaaacgggcggcccggcccgtttaggcctggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 11369301  T
Q  286 gc-aaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtac 383  Q
    || |||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  11369302 gcaaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtac 11369401  T
Q  384 gaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    | ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  11369402 ggaacatacataaatatgccgggctaatgggccagcccgggcccgtatc 11369450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 191 - 410
Target Start/End: Complemental strand, 15071248 - 15071023
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccag-----gccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    |||||||||||||||||||||||||  |||||||||| ||||| |     ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15071248 tagagctgtcaaaacgggcggcccggtccgtttaggctcggccggaccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 15071149  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  15071148 gcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacg 15071049  T
Q  385 aaacatacataaatatgccgggctaa 410  Q
     |||||||||||||||||||||||||    
T  15071048 gaacatacataaatatgccgggctaa 15071023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 235 - 432
Target Start/End: Complemental strand, 10998132 - 10997942
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgg 334  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||        |||||    
T  10998132 ggccaagggcttttaagggccgggctaaaaagtccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggct--------aacgg 10998041  T
Q  335 gccagccctggcccgtatttttt-cttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  10998040 gccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgggcccgtatc 10997942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 235 - 542
Target Start/End: Complemental strand, 20143687 - 20143381
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgg 334  Q
    ||||| |||||||| |||||||||||||||||||| |||| |||||||||   |||||  ||||| |||||||||||||||||||||||| |||||||||    
T  20143687 ggccacgggcttttgagggccgggctaaaaagcccagtttaaatatgggcctgaaaaagagagcccgagcccggccctatacgggcttccgggctaacgg 20143588  T
Q  335 gccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacat--------acataaatatgccgggctaacgggccaacccaggc 425  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||   ||||        ||||||||||  ||||||||||||||| ||| |||    
T  20143587 gccagccctgggctgtatttttttcttcccttttccattcttttaagtactgcacatgtagaataacataaatatatcgggctaacgggccagcccgggc 20143488  T
Q  426 ccgtatctgtannnnnnnnccttcccattctttaaggattgaacataataacttaaatatacacaaataggctaatagtgaacaaaagataaattaagat 525  Q
    |||||| |||         |||||| ||| ||||||||||||||| ||||| |||||||||||||        || ||||||||||||||||||||||||    
T  20143487 ccgtatatgt--tttttttccttcctattttttaaggattgaacaaaataatttaaatatacaca--------aacagtgaacaaaagataaattaagat 20143398  T
Q  526 cgatccaagataataac 542  Q
     ||||||||| ||||||    
T  20143397 tgatccaagagaataac 20143381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 235 - 542
Target Start/End: Original strand, 22189152 - 22189458
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgg 334  Q
    ||||| |||||||| |||||||||||||||||||| |||| |||||||||   |||||  ||||| |||||||||||||||||||||||| |||||||||    
T  22189152 ggccacgggcttttgagggccgggctaaaaagcccagtttaaatatgggcctgaaaaagagagcccgagcccggccctatacgggcttccgggctaacgg 22189251  T
Q  335 gccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacat--------acataaatatgccgggctaacgggccaacccaggc 425  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||||   ||||        ||||||||||  ||||||||||||||| ||| |||    
T  22189252 gccagccctgggctgtatttttttcttcccttttccattcttttaagtactgcacatgtagaataacataaatatatcgggctaacgggccagcccgggc 22189351  T
Q  426 ccgtatctgtannnnnnnnccttcccattctttaaggattgaacataataacttaaatatacacaaataggctaatagtgaacaaaagataaattaagat 525  Q
    |||||| |||         |||||| ||| ||||||||||||||| ||||| |||||||||||||        || ||||||||||||||||||||||||    
T  22189352 ccgtatatgt--tttttttccttcctattttttaaggattgaacaaaataatttaaatatacaca--------aacagtgaacaaaagataaattaagat 22189441  T
Q  526 cgatccaagataataac 542  Q
     ||||||||| ||||||    
T  22189442 tgatccaagagaataac 22189458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 191 - 321
Target Start/End: Original strand, 12075821 - 12075956
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc-----aggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    |||||||||||||||||||||||||  ||||||||||||||||     |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12075821 tagagctgtcaaaacgggcggcccggtccgtttaggcccggccgggccaggccaagggcttttaagggtcgggctaaaaagcccggtttgaatatgggct 12075920  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggct 321  Q
      |||||  ||||| |||||  ||||| ||||||||    
T  12075921 agaaaaatagagcccgagcctagccctttacgggct 12075956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 191 - 321
Target Start/End: Original strand, 12271376 - 12271511
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcca-----ggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    |||||||||||||| |||||||||| ||| |||||||||||||      |||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  12271376 tagagctgtcaaaatgggcggcccggcccatttaggcccggcccaactgggccaagggcttttaaggaccgggctaaaaagtccggtttgaatatgggct 12271475  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    | |||||  ||||| |||||||||||| ||||||||    
T  12271476 gaaaaaatagagcccgagcccggccctttacgggct 12271511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 191 - 342
Target Start/End: Original strand, 31654852 - 31655008
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaa----gggcttttaagggccgggctaaaaagcccggtttgaa-tatgggct 285  Q
    |||||||||||||||||||  |||| ||||||| ||||||||| | |       ||||| || |||||||||| |||||||||||||| || ||||||||    
T  31654852 tagagctgtcaaaacgggctacccggcccgtttcggcccggccggtcgggttgcgggctatttagggccgggccaaaaagcccggtttaaaatatgggct 31654951  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    | || || |||||| ||||||||||||||||||||| || |||||||||||||||||    
T  31654952 ggaataattgagcccgagcccggccctatacgggctcccgggctaacgggccagccc 31655008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 241 - 343
Target Start/End: Original strand, 17868450 - 17868552
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| ||||||||||||||||||||  ||| |||| |||||| || ||  ||||||||| |||| |||||||||||| || |||||||||||||||    
T  17868450 gggctttttagggccgggctaaaaagccctatttaaatacgggctggaataatagagcctgagtccggtcctatacgggctcccgggctaacgggccagc 17868549  T
Q  341 cct 343  Q
    |||    
T  17868550 cct 17868552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 17878233 - 17878334
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| ||||||||||||||||||||  ||| |||| |||||| || ||  ||||||||| |||| |||||||||||| || |||||||||||||||    
T  17878233 gggctttttagggccgggctaaaaagccctatttaaatacgggctggaataatagagcctgagtccggtcctatacgggctcccgggctaacgggccagc 17878332  T
Q  341 cc 342  Q
    ||    
T  17878333 cc 17878334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 321
Target Start/End: Complemental strand, 3045132 - 3044997
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    |||||||||||||||||  ||||||||||||| |||||| |||   ||     | |||||||||||||||||||| |||||| | |||||||||||||||    
T  3045132 tagagctgtcaaaacggaaggcccgacccgttcaggcccagcccaaccgggtaacgggcttttaagggccgggctgaaaagctctgtttgaatatgggct 3045033  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    | |||||   |||| || ||||||||| ||| ||||    
T  3045032 ggaaaaataaagcccgatcccggccctgtacaggct 3044997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 339
Target Start/End: Original strand, 27965829 - 27965927
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccag 339  Q
    ||||||||  |||||||||||||||||||||||| |||| |||||| || |   ||||| |||| |||||||||| ||||| || ||||| ||| ||||    
T  27965829 gggcttttttgggccgggctaaaaagcccggtttaaatacgggctggaatattagagcccgagcacggccctatatgggctcccgggctatcggaccag 27965927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 10997844 - 10997810
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  10997844 ggccaagggcttttacgggccgggctaaaaagccc 10997810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 11369581 - 11369615
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  11369581 ggccaagggcttttacgggccgggctaaaaagccc 11369615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 15066031 - 15065997
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  15066031 ggccaagggcttttacgggccgggctaaaaagccc 15065997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 32464863 - 32464905
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    |||||||||||||||||  ||||||||||||||||| ||||||    
T  32464863 tagagctgtcaaaacggatggcccgacccgtttagggccggcc 32464905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 2067232 - 2067204
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  2067232 gggcttttaagggccgggctaaaaagccc 2067204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 2703019 - 2703047
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  2703019 gggcttttaagggccgggctaaaaagccc 2703047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 4170957 - 4170985
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  4170957 gggcttttaagggccgggctaaaaagccc 4170985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 15068043 - 15068071
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  15068043 gggcttttaagggccgggctaaaaagccc 15068071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 21036717 - 21036681
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttagg 226  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  21036717 ctagagctgtcaaaatgggcggcccgatccgtttagg 21036681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 22988193 - 22988221
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  22988193 gggcttttaagggccgggctaaaaagccc 22988221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 23800203 - 23800175
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  23800203 gggcttttaagggccgggctaaaaagccc 23800175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 26555240 - 26555268
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  26555240 gggcttttaagggccgggctaaaaagccc 26555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 29641068 - 29641096
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  29641068 gggcttttaagggccgggctaaaaagccc 29641096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 31511247 - 31511275
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  31511247 gggcttttaagggccgggctaaaaagccc 31511275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 225 - 511
Target Start/End: Complemental strand, 12749992 - 12749701
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||| ||    
T  12749992 ggcccgaccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctcttcgggctccc 12749893  T
Q  325 aggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccagg 424  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||    
T  12749892 gggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacaaaacatacataaatatgccgggctaacgggccagcccggg 12749793  T
Q  425 cccgtatctgta-nnnnnnnnccttcccattctttaaggattgaacataataacttaaatatacac----aaataggctaatagtgaacaaa 511  Q
    ||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||    
T  12749792 cccgtatctgtattttttttttcttcccattctttaaggattgaacataataacttaaatatacacaaataaataggctaatagtgaacaaa 12749701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 191 - 432
Target Start/End: Original strand, 9660488 - 9660730
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaa 290  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  9660488 tagagctgtcaaaacgggcggcccggcccgtttaggcccggccgggccaagggcttttaagggttgggctaaaaagcccggtttgaatatgggctgcaaa 9660587  T
Q  291 aaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaaca 389  Q
    ||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  9660588 aaatgagcccgagcccggccctatacgggctcccgggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaaca 9660687  T
Q  390 tacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  9660688 tacataaatatgccgggctaacgggccagcccgggcccgtatc 9660730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 190 - 432
Target Start/End: Complemental strand, 33189468 - 33189222
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggc 284  Q
    |||||||||||||||||||||||||  ||||||||||||||||| ||||     |||||||||||||||||||||||||||||| ||||| |||||||||    
T  33189468 ctagagctgtcaaaacgggcggcccagcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagccaggtttaaatatgggc 33189369  T
Q  285 tgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacg 384  Q
    ||||||||||||||| ||||||||||||||||||||| || |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||    
T  33189368 tgcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggctggccctggcccgtatttttt-ttcccttttccattcttttaagtacg 33189270  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
     |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33189269 gaacatacataaatatgccgggctaacgggccagcccgggcccgtatc 33189222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 43780869 - 43781077
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||    
T  43780869 ggcctggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggctctatacgggctccc 43780968  T
Q  325 aggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||| |    
T  43780969 gggctaatgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatcccgggctaacgggccagcccgg 43781068  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  43781069 gcccgtatc 43781077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 45756939 - 45757146
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||    
T  45756939 ggcccggcccggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgc-aaaaatgagcccgagcccggccctatacgggctccc 45757037  T
Q  325 aggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||| ||| |    
T  45757038 gggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtatggaacatacataaatatgtcgggctaacgggccagcccgg 45757137  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  45757138 gcccgtatc 45757146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 252 - 407
Target Start/End: Original strand, 47188271 - 47188427
Alignment:
Q  252 ggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta 351  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||||||||||||||||||||||||    
T  47188271 ggcccggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggttcccgggctaacgggccagccctggcccgta 47188370  T
Q  352 -ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggc 407  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  47188371 tttttttcttcccttttccattcttttaagtacggaacatacataaatatgtcgggc 47188427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 241 - 383
Target Start/End: Complemental strand, 46158459 - 46158317
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| ||||||||||||||||||||||||| |||||||||   |||||  ||||| ||||||||||||||||||||| || |||||||||||||||    
T  46158459 gggcttttgagggccgggctaaaaagcccggtttaaatatgggcctgaaaaatagagcccgagcccggccctatacgggctcccgggctaacgggccagc 46158360  T
Q  341 cctggcccgtattttttcttcccttttccattcttttaagtac 383  Q
    |||| |||||||||||| || ||||||||||||||||| ||||    
T  46158359 cctgacccgtattttttttttccttttccattcttttacgtac 46158317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 191 - 350
Target Start/End: Complemental strand, 4222007 - 4221843
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggc-----caagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||| ||| |||||||||||| ||| |||| | |     ||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  4222007 tagagctgtcaaaacggacgggccgacccgtttaagccgggcccgacgggggcaagggctttttagggccgggctaaaaagcccggtttaaatatgggct 4221908  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgt 350  Q
    | |||||  ||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  4221907 ggaaaaatagagcccgagcccggccctatacgggctcccgagctaacgggccagccctggcccgt 4221843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 225 - 361
Target Start/End: Complemental strand, 17332197 - 17332062
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| || |||||  ||||| |||||||||||| |||||||| |     
T  17332197 ggcccggccgggccaagggcttttaagggccgggctaaaaagcc-ggtttgaatatgggttggaaaaatagagcccgagcccggccctttacgggctcct 17332099  T
Q  325 aggctaacgggccagccctggcccgtattttttcttc 361  Q
     ||||||||||||||||| ||||||| ||||| ||||    
T  17332098 gggctaacgggccagcccaggcccgtttttttccttc 17332062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 191 - 357
Target Start/End: Complemental strand, 45566693 - 45566523
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||| ||||||| ||| ||| |||||||||||| |||| ||||     || ||||||||||||||||||||||||||||||||||||||||||||    
T  45566693 tagagctgtaaaaacggacggtccggcccgtttaggcctggccgggccgggccaatggcttttaagggccgggctaaaaagcccggtttgaatatgggct 45566594  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatttttt 357  Q
    | |||||  ||||| ||||||||| || |||||||| || ||||||| ||||||||  ||||||| ||||||    
T  45566593 g-aaaaatagagcccgagcccggctctttacgggctccccggctaacaggccagccaaggcccgtttttttt 45566523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 225 - 361
Target Start/End: Original strand, 48469610 - 48469746
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    |||||| || |||||||||||||||||| ||||||||||||||| ||||||||| ||||||| |||||  |||||  ||||||||||| ||||||||| |    
T  48469610 ggcccgaccgggccaagggcttttaaggaccgggctaaaaagcctggtttgaatttgggctggaaaaatagagcccaagcccggccctttacgggctttc 48469709  T
Q  325 aggctaacgggccagccctggcccgtattttttcttc 361  Q
     |||||||||| |||||| | ||||| ||||||||||    
T  48469710 gggctaacgggacagcccagacccgttttttttcttc 48469746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 42763074 - 42763154
Alignment:
Q  352 ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||||    
T  42763074 ttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcctgggcccgtatc 42763154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 230 - 357
Target Start/End: Original strand, 49228490 - 49228618
Alignment:
Q  230 ggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatat-gggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggc 328  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||   ||||| |||| ||||||| |||||||| |  | |    
T  49228490 ggccgggccaagggcttttgagggccgggctaaaaaggccggtttgaatatggggctggaaaagtagagcccgagctcggccctttacgggctcctggac 49228589  T
Q  329 taacgggccagccctggcccgtatttttt 357  Q
    |||||||||||||| | ||||| ||||||    
T  49228590 taacgggccagcccagtcccgtctttttt 49228618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 321
Target Start/End: Complemental strand, 32058282 - 32058147
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    |||||||||||||||||||| |||| |||||||| |||||||| | ||     ||||||||||||||| |||||||||||| || |||||||||||| ||    
T  32058282 tagagctgtcaaaacgggcgccccggcccgtttaagcccggcccgaccgggtcaagggcttttaagggtcgggctaaaaagtccagtttgaatatggact 32058183  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggct 321  Q
    | ||||   || || |||||||||||| ||||||||    
T  32058182 ggaaaagtagaacccgagcccggccctttacgggct 32058147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 43263175 - 43263276
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| |||||||| |||||||||||||||| |||| |||||| || ||  ||||  ||||||||||||||||||||| || |||||| ||||||||    
T  43263175 gggctttttagggccggactaaaaagcccggtttaaatacgggctgaaataatagagctcgagcccggccctatacgggctcccgggctaatgggccagc 43263274  T
Q  341 cc 342  Q
    ||    
T  43263275 cc 43263276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 42763025 - 42763070
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccg 270  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  42763025 ggcccggccgggccaagggcttttaagggccgggctaaaaagcccg 42763070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 276 - 342
Target Start/End: Original strand, 31488879 - 31488945
Alignment:
Q  276 aatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    ||||||||||| || || ||||| ||| |||||||||||||||||| || |||||||||||||||||    
T  31488879 aatatgggctggaataattgagcttgaacccggccctatacgggctcccgggctaacgggccagccc 31488945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 336
Target Start/End: Complemental strand, 6502088 - 6502009
Alignment:
Q  257 ggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggc 336  Q
    |||||||||| ||||||||||||||||||| |||||  ||||| ||| |||||||| ||||| || || |||| ||||||    
T  6502088 ggctaaaaagtccggtttgaatatgggctggaaaaatagagcccgagtccggccctttacggactcccgggcttacgggc 6502009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 23973639 - 23973680
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  23973639 ctagagctgtcaaaacgggcggcccggcccgtttagggccgg 23973680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 336
Target Start/End: Original strand, 24682295 - 24682386
Alignment:
Q  245 ttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggc 336  Q
    |||| ||||||||| | |||||||||| || ||||||||||| ||  |  ||||| |||||||| |||||||||||  || |||||||||||    
T  24682295 tttttagggccgggatgaaaagcccggattaaatatgggctggaattatagagcccgagcccgggcctatacgggcacccgggctaacgggc 24682386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 700604 - 700562
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    |||||||||||||||||||| |||| |||||||||| ||||||    
T  700604 tagagctgtcaaaacgggcgacccggcccgtttagggccggcc 700562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 9660827 - 9660861
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  9660827 ggccaagggcttttacgggccgggctaaaaagccc 9660861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 12745682 - 12745648
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  12745682 ggccaagggcttttacgggccgggctaaaaagccc 12745648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 12756671 - 12756637
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  12756671 ggccaagggcttttacgggccgggctaaaaagccc 12756637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 33189130 - 33189096
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  33189130 ggccaagggcttttacgggccgggctaaaaagccc 33189096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 542
Target Start/End: Complemental strand, 45566458 - 45566416
Alignment:
Q  500 atagtgaacaaaagataaattaagatcgatccaagataataac 542  Q
    |||||||||||||||||||||||| | ||||||||| ||||||    
T  45566458 atagtgaacaaaagataaattaagtttgatccaagagaataac 45566416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 45757242 - 45757276
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  45757242 ggccaagggcttttatgggccgggctaaaaagccc 45757276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 1858808 - 1858836
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  1858808 gggcttttaagggccgggctaaaaagccc 1858836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 5114993 - 5114965
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  5114993 gggcttttaagggccgggctaaaaagccc 5114965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 19406734 - 19406706
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  19406734 gggcttttaagggccgggctaaaaagccc 19406706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 21720486 - 21720446
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    ||||||||||||||||||||| ||| |||||||||| ||||    
T  21720486 tagagctgtcaaaacgggcggaccggcccgtttagggccgg 21720446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 231
Target Start/End: Complemental strand, 27415655 - 27415615
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccgg 231  Q
    ||||||||||||||||| ||| |||||||||||||| ||||    
T  27415655 tagagctgtcaaaacggacggtccgacccgtttaggaccgg 27415615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 28199305 - 28199277
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  28199305 gggcttttaagggccgggctaaaaagccc 28199277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 28472823 - 28472851
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgaccc 219  Q
    |||||||||||||||||||||||||||||    
T  28472823 tagagctgtcaaaacgggcggcccgaccc 28472851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 39995492 - 39995520
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  39995492 gggcttttaagggccgggctaaaaagccc 39995520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 41310561 - 41310589
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  41310561 gggcttttaagggccgggctaaaaagccc 41310589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 185; Significance: 1e-100; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 191 - 417
Target Start/End: Complemental strand, 21104446 - 21104214
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggcc-----aagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||     |||||||||||||||||||||||||||||||||||||||||||||||    
T  21104446 tagagctgtcaaaacgggcggcccggcccgtttaggcccggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 21104347  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21104346 gcaaaaaatgagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttttcttcccttttccattcttttaagtacg 21104247  T
Q  385 aaacatacataaatatgccgggctaacgggcca 417  Q
    |||||||||||||||||||||||||||||||||    
T  21104246 aaacatacataaatatgccgggctaacgggcca 21104214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 12 - 191
Target Start/End: Complemental strand, 44685393 - 44685214
Alignment:
Q  12 gtttggtggtccggataagagatataatataataattgttcttgtatcttgtctaattcaagtatttgatgagacattcagatatgataagttaatcatg 111  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  44685393 gtttggtggtccggataagagacataatataataattgttcttgtatcttgtctaattcaagtatttgatgagacagtcagatataataagttaatcatg 44685294  T
Q  112 atatttatcatcgttcacttctctagtcaatggatcatcgtattctcttttctctcattccctcttctaactatcttcct 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44685293 atatttatcatcgttcacttctctagtcaatggatcatcgtattctcttttctctcattccctcttctaactatcttcct 44685214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 225 - 432
Target Start/End: Complemental strand, 25096686 - 25096478
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||    
T  25096686 ggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaataatgagcccgagcccggccctatacgggctccc 25096587  T
Q  325 aggctaacgggccagccctggcccgtatt-ttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |    
T  25096586 gggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgg 25096487  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  25096486 gcccgtatc 25096478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 29205691 - 29205899
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  29205691 ggcccggcccggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgagctccc 29205790  T
Q  325 aggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |    
T  29205791 gggctaacgggccagccctggcccatatttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcctgg 29205890  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  29205891 gcccgtatc 29205899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 40860736 - 40860944
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  40860736 ggcccggccgggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctccc 40860835  T
Q  325 aggctaacgggccagccctggcccgtatttttt-cttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |    
T  40860836 gggctaacgggtcggccctgacccgtattttttccttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgg 40860935  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  40860936 gcccgtatc 40860944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 225 - 432
Target Start/End: Original strand, 40000491 - 40000699
Alignment:
Q  225 ggcccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttcc 324  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  40000491 ggcccggccgagccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcccgagcccggccctatacgggctccc 40000590  T
Q  325 aggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccag 423  Q
     |||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| |    
T  40000591 gggctaacgggccggtcctggcccgtatttttttcttcccttttccattcttttaagtacggaacatacataaatatgctgggctaacgggccagcccgg 40000690  T
Q  424 gcccgtatc 432  Q
    |||||||||    
T  40000691 gcccgtatc 40000699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 191 - 432
Target Start/End: Original strand, 15560245 - 15560484
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttagg-----cccggccaggccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||| ||||||||||     ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  15560245 tagagctgtcaaaacgggcggcccggcccgtttaggtccggcccggccgggccaagggattttaagggccgggttaaaaagcccggtttgaatatgggct 15560344  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgta-ttttttcttcccttttccattcttttaagtacg 384  Q
    |||||||||||||| |||||||||||||||||        |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  15560345 gcaaaaaatgagcccgagcccggccctatacg--------ggctaacgggccggccctggcccgtatttttttcttcccttttccattcttttaaatacg 15560436  T
Q  385 aaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
     |||||||||||||||||||||||||||||| | ||  ||||||||||    
T  15560437 gaacatacataaatatgccgggctaacgggctagcctgggcccgtatc 15560484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 191 - 431
Target Start/End: Original strand, 15613306 - 15613556
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccag-----gccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggct 285  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |     || | |||||||| |||||||||||||||  |||||||| |||||||||     
T  15613306 tagagctgtcaaaacgggcggcccgacccgtttaggctcggcccgaacgggcaacgggcttttgagggccgggctaaaat-cccggtttaaatatgggcc 15613404  T
Q  286 gcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtattttttcttcccttttccattcttttaagtacga 385  Q
      |||||  ||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||      
T  15613405 taaaaaatagagcccgagcccggccctatacgggctcccgggctaacgggccagccctggcccgtatttttt-tttccttttccattcttttacgtactg 15613503  T
Q  386 aac-------atacataaatatgccgggctaacgggccaacccaggcccgtat 431  Q
    |||       |||||||||||| |||||||||||||||| ||| |||||||||    
T  15613504 aacatataaaatacataaatataccgggctaacgggccagcccgggcccgtat 15613556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 17921632 - 17921483
Alignment:
Q  197 tgtcaaaacgggcggcccgacccgtttaggcccggccag-----gccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaa 291  Q
    ||||||||||||||||||| ||||||||||||||||| |     ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  17921632 tgtcaaaacgggcggcccggcccgtttaggcccggcctggccgagccaagggcttttaagggccgggctaaaaagcctggtttgaatatgggctggaaaa 17921533  T
Q  292 aatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
     | ||||| |||||||||||| | |||||| |  |||||||||||||||||    
T  17921532 ta-gagcccgagcccggccctttgcgggctcctgggctaacgggccagccc 17921483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 241 - 347
Target Start/End: Original strand, 42730072 - 42730178
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||||||||||||||| |||||||| |||||||||||||||| |||||  ||||| |||||||||||| |||| ||||||||||||||||||||||    
T  42730072 gggcttttaagggccgggctgaaaagccctgtttgaatatgggctgaaaaaatagagcccgagcccggccctgtacgtgcttccaggctaacgggccagc 42730171  T
Q  341 cctggcc 347  Q
    |||||||    
T  42730172 cctggcc 42730178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 225 - 357
Target Start/End: Complemental strand, 9471748 - 9471615
Alignment:
Q  225 ggcccggccaggc-caagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttc 323  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||  ||||| |||||||||||| |||||||| |    
T  9471748 ggcccggccaggggcaagggcttttaaggcccgggctaaaaagcccagtttgaatatgggctgaaaaaatagagcccgagcccggccctttacgggctcc 9471649  T
Q  324 caggctaacgggccagccctggcccgtatttttt 357  Q
    | |||||||||| |||||| ||||||| ||||||    
T  9471648 cgggctaacggggcagcccaggcccgtttttttt 9471615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 432
Target Start/End: Original strand, 29201235 - 29201315
Alignment:
Q  352 ttttttcttcccttttccattcttttaagtacgaaacatacataaatatgccgggctaacgggccaacccaggcccgtatc 432  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  29201235 ttttttcttcccttttccattcttttaagtacggaacatacataaatatgccgggctaacgggccagcccgggcccgtatc 29201315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 26555853 - 26555954
Alignment:
Q  241 gggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagc 340  Q
    |||||||| |||||||||||||||||||| |||| ||||||||||| || ||  ||||| |||||||||||||||| |||| || |||||||||||||||    
T  26555853 gggctttttagggccgggctaaaaagccctgtttaaatatgggctgaaataatggagcccgagcccggccctatacaggctcccgggctaacgggccagc 26555952  T
Q  341 cc 342  Q
    ||    
T  26555953 cc 26555954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 357
Target Start/End: Complemental strand, 5272005 - 5271903
Alignment:
Q  255 cgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccctggcccgtattt 354  Q
    |||||| ||||||||| ||| ||||||| | | |||||  ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||| |    
T  5272005 cgggctgaaaagcccgctttaaatatggaccggaaaaatggagcccgagcccggccctatacgggcttctgggctaacgggccagccctggcccgtatct 5271906  T
Q  355 ttt 357  Q
    |||    
T  5271905 ttt 5271903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 342
Target Start/End: Original strand, 38837341 - 38837439
Alignment:
Q  244 cttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    ||||| ||||||||||||||||||||||||| ||||  ||||| || ||  ||||| ||||||||||||||||||||| || |||||||||||||||||    
T  38837341 ctttttagggccgggctaaaaagcccggtttaaatacaggctgaaataatagagcccgagcccggccctatacgggctcccgggctaacgggccagccc 38837439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 243 - 342
Target Start/End: Original strand, 4469922 - 4470021
Alignment:
Q  243 gcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    |||||| ||| |||||||||||||  | |||||||||||| ||| || ||  ||||| ||||||||||||||||||||| || |||||||||||||||||    
T  4469922 gctttttaggcccgggctaaaaagatctgtttgaatatggactgaaataatggagcccgagcccggccctatacgggctcccgggctaacgggccagccc 4470021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 245 - 342
Target Start/End: Complemental strand, 38571464 - 38571367
Alignment:
Q  245 ttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacgggccagccc 342  Q
    |||| ||||| ||||||||||||||| ||| |||| |||||| || ||  ||||  |||||||||||||||||||||  | | |||||||||||||||    
T  38571464 tttttagggctgggctaaaaagcccgatttaaatacgggctgtaataatagagctcgagcccggccctatacgggctctcggactaacgggccagccc 38571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 10710465 - 10710423
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||||||||||||||||||| |||||||||| ||||||    
T  10710465 tagagctgtcaaaacgggcggcccggcccgtttagggccggcc 10710423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 19944238 - 19944273
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttagg 226  Q
    |||||||||||||||||||||||||||| |||||||    
T  19944238 tagagctgtcaaaacgggcggcccgacctgtttagg 19944273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 25868379 - 25868414
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttagg 226  Q
    ||||| ||||||||||||||||||||||||||||||    
T  25868379 tagagttgtcaaaacgggcggcccgacccgtttagg 25868414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 15560575 - 15560609
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  15560575 ggccaagggcttttacgggccgggctaaaaagccc 15560609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 318
Target Start/End: Original strand, 20921886 - 20922019
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggccaggc-------caagggcttttaagggccgggct-aaaaagcccggtttgaatatgg 282  Q
    ||||||||||||||||||||||| ||| || |||||||||||| | |       ||||  |||||  |||||| ||| |||||||||||||| |||||||    
T  20921886 tagagctgtcaaaacgggcggccagactcgcttaggcccggcctgactgggtaacaag--cttttttgggccgagctgaaaaagcccggtttaaatatgg 20921983  T
Q  283 gctgcaaaaaatgagcctgagcccggccctatacgg 318  Q
    |||| || || |||||| |||  |||||||||||||    
T  20921984 gctggaataattgagcccgagtgcggccctatacgg 20922019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 21747521 - 21747487
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  21747521 ggccaagggcttttacgggccgggctaaaaagccc 21747487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Complemental strand, 25096408 - 25096374
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  25096408 ggccaagggcttttacgggccgggctaaaaagccc 25096374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 29201415 - 29201449
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  29201415 ggccaagggcttttacgggccgggctaaaaagccc 29201449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 233
Target Start/End: Complemental strand, 30556282 - 30556240
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||| ||||||||||||||||||| |||||||||| ||||||    
T  30556282 tagagttgtcaaaacgggcggcccggcccgtttagggccggcc 30556240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 40000796 - 40000830
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  40000796 ggccaagggcttttacgggccgggctaaaaagccc 40000830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 1345733 - 1345761
Alignment:
Q  191 tagagctgtcaaaacgggcggcccgaccc 219  Q
    |||||||||||||||||||||||||||||    
T  1345733 tagagctgtcaaaacgggcggcccgaccc 1345761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 13247815 - 13247787
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  13247815 gggcttttaagggccgggctaaaaagccc 13247787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Complemental strand, 27495970 - 27495942
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  27495970 gggcttttaagggccgggctaaaaagccc 27495942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 30801230 - 30801258
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  30801230 gggcttttaagggccgggctaaaaagccc 30801258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 35439560 - 35439588
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  35439560 gggcttttaagggccgggctaaaaagccc 35439588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 236 - 352
Target Start/End: Original strand, 16430 - 16540
Alignment:
Q  236 gccaagggcttttaagggccgggctaaaaagcccggtttgaatatgggctgcaaaaaatgagcctgagcccggccctatacgggcttccaggctaacggg 335  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||| || ||||||||||    
T  16430 gccaagggcttttaagggtcgggctaaaaagcccggtttgaatatgggctgcaaaaaa------tgagcccggccctatacgggctcccgggctaacggg 16523  T
Q  336 ccagccctggcccgtat 352  Q
    ||||||| |||||||||    
T  16524 ccagcccgggcccgtat 16540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 269
Target Start/End: Original strand, 16639 - 16673
Alignment:
Q  235 ggccaagggcttttaagggccgggctaaaaagccc 269  Q
    ||||||||||||||| |||||||||||||||||||    
T  16639 ggccaagggcttttacgggccgggctaaaaagccc 16673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 233
Target Start/End: Complemental strand, 51855 - 51812
Alignment:
Q  190 ctagagctgtcaaaacgggcggcccgacccgtttaggcccggcc 233  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  51855 ctagagctgtcaaaacgggcggcccgacccgtttagggccggcc 51812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 7807 - 7835
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  7807 gggcttttaagggccgggctaaaaagccc 7835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 241 - 269
Target Start/End: Original strand, 21967 - 21995
Alignment:
Q  241 gggcttttaagggccgggctaaaaagccc 269  Q
    |||||||||||||||||||||||||||||    
T  21967 gggcttttaagggccgggctaaaaagccc 21995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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