View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9073_low_1 (Length: 898)

Name: NF9073_low_1
Description: NF9073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9073_low_1
NF9073_low_1
[»] chr6 (26 HSPs)
chr6 (686-880)||(29438389-29438583)
chr6 (592-688)||(29438081-29438179)
chr6 (518-573)||(6385921-6385976)
chr6 (520-574)||(20213102-20213156)
chr6 (520-574)||(22107125-22107179)
chr6 (517-571)||(30127458-30127512)
chr6 (517-574)||(31622952-31623009)
chr6 (518-574)||(8597708-8597764)
chr6 (518-573)||(14199909-14199964)
chr6 (519-574)||(14558022-14558076)
chr6 (515-574)||(18263896-18263955)
chr6 (518-573)||(24333987-24334042)
chr6 (517-562)||(654248-654293)
chr6 (517-562)||(3222737-3222782)
chr6 (517-562)||(12390475-12390520)
chr6 (518-562)||(15360200-15360244)
chr6 (517-573)||(33549162-33549218)
chr6 (539-574)||(23242066-23242101)
chr6 (520-574)||(2484781-2484835)
chr6 (519-573)||(32250812-32250866)
chr6 (520-562)||(34147399-34147441)
chr6 (520-562)||(34160015-34160057)
chr6 (517-562)||(1344985-1345030)
chr6 (517-558)||(9239025-9239066)
chr6 (517-562)||(11448921-11448966)
chr6 (517-562)||(14212942-14212987)
[»] chr7 (41 HSPs)
chr7 (518-574)||(41487418-41487474)
chr7 (518-573)||(279916-279971)
chr7 (518-574)||(4572258-4572314)
chr7 (518-574)||(21558187-21558243)
chr7 (518-574)||(30579394-30579450)
chr7 (521-573)||(33181172-33181224)
chr7 (539-574)||(3968615-3968650)
chr7 (518-573)||(41519072-41519127)
chr7 (518-573)||(48983695-48983750)
chr7 (521-574)||(2446370-2446423)
chr7 (517-562)||(7175964-7176009)
chr7 (517-562)||(7275331-7275376)
chr7 (518-567)||(18056743-18056792)
chr7 (517-562)||(22119942-22119987)
chr7 (517-562)||(29861724-29861769)
chr7 (517-562)||(40543012-40543057)
chr7 (517-570)||(48079701-48079754)
chr7 (518-562)||(654806-654850)
chr7 (518-562)||(2751326-2751370)
chr7 (542-574)||(11720921-11720953)
chr7 (518-574)||(15137612-15137668)
chr7 (518-574)||(17040973-17041029)
chr7 (518-574)||(25132340-25132395)
chr7 (538-573)||(5273552-5273587)
chr7 (520-574)||(9183152-9183206)
chr7 (517-562)||(2103109-2103154)
chr7 (521-562)||(2344357-2344398)
chr7 (517-562)||(10091242-10091287)
chr7 (517-562)||(11997903-11997948)
chr7 (517-574)||(20335792-20335849)
chr7 (517-562)||(21217935-21217980)
chr7 (521-562)||(21835209-21835250)
chr7 (517-562)||(22703540-22703585)
chr7 (540-573)||(22932674-22932707)
chr7 (518-559)||(23330844-23330885)
chr7 (517-574)||(25590669-25590726)
chr7 (517-562)||(27009413-27009458)
chr7 (518-559)||(28647024-28647065)
chr7 (517-562)||(28950925-28950970)
chr7 (518-571)||(38374563-38374616)
chr7 (521-574)||(43663056-43663109)
[»] chr4 (34 HSPs)
chr4 (521-573)||(51250484-51250536)
chr4 (520-574)||(2732055-2732109)
chr4 (517-574)||(28635754-28635811)
chr4 (518-573)||(46295156-46295211)
chr4 (517-574)||(51954172-51954229)
chr4 (517-570)||(55427165-55427218)
chr4 (518-574)||(7949415-7949471)
chr4 (518-574)||(8030165-8030221)
chr4 (518-574)||(9693459-9693515)
chr4 (515-574)||(49262645-49262704)
chr4 (518-573)||(51622544-51622599)
chr4 (520-574)||(8034843-8034896)
chr4 (518-564)||(51535664-51535710)
chr4 (517-570)||(19238542-19238595)
chr4 (517-562)||(27528897-27528942)
chr4 (518-562)||(25852265-25852309)
chr4 (517-573)||(32046626-32046682)
chr4 (518-574)||(38869827-38869883)
chr4 (518-574)||(46329223-46329279)
chr4 (527-574)||(12793872-12793919)
chr4 (515-574)||(47386752-47386811)
chr4 (527-573)||(3611655-3611701)
chr4 (520-574)||(27104989-27105043)
chr4 (544-574)||(56440487-56440517)
chr4 (517-570)||(19229173-19229226)
chr4 (517-562)||(22625172-22625217)
chr4 (518-559)||(22630291-22630332)
chr4 (517-562)||(32986247-32986292)
chr4 (517-562)||(33696381-33696426)
chr4 (517-562)||(34723849-34723894)
chr4 (517-562)||(34844860-34844905)
chr4 (517-562)||(40058954-40058999)
chr4 (517-562)||(49287908-49287953)
chr4 (517-562)||(52983669-52983714)
[»] chr1 (38 HSPs)
chr1 (518-570)||(51814553-51814605)
chr1 (518-574)||(6122853-6122909)
chr1 (517-574)||(12587328-12587384)
chr1 (517-574)||(16893452-16893509)
chr1 (527-574)||(31794225-31794272)
chr1 (515-573)||(1205387-1205445)
chr1 (539-573)||(17297065-17297099)
chr1 (520-574)||(23471046-23471100)
chr1 (519-573)||(44961825-44961879)
chr1 (517-574)||(1094583-1094640)
chr1 (517-562)||(4621339-4621384)
chr1 (517-562)||(17935819-17935864)
chr1 (521-574)||(18037574-18037627)
chr1 (517-562)||(24122073-24122118)
chr1 (517-562)||(24674443-24674488)
chr1 (517-574)||(40257457-40257514)
chr1 (517-562)||(45859145-45859190)
chr1 (518-562)||(168252-168296)
chr1 (518-574)||(31605809-31605865)
chr1 (518-570)||(45266893-45266945)
chr1 (518-562)||(46607861-46607905)
chr1 (515-574)||(9117175-9117234)
chr1 (518-573)||(15065024-15065079)
chr1 (519-574)||(31383759-31383814)
chr1 (523-573)||(3799970-3800020)
chr1 (540-570)||(24730465-24730495)
chr1 (520-562)||(37351563-37351605)
chr1 (518-567)||(52029904-52029954)
chr1 (517-562)||(7578459-7578504)
chr1 (517-562)||(7766829-7766874)
chr1 (517-562)||(7946894-7946939)
chr1 (517-562)||(8077697-8077742)
chr1 (517-562)||(9500457-9500502)
chr1 (517-562)||(15059504-15059549)
chr1 (517-562)||(18646903-18646948)
chr1 (517-562)||(23734166-23734211)
chr1 (517-562)||(23741358-23741403)
chr1 (517-562)||(46113504-46113549)
[»] chr3 (38 HSPs)
chr3 (515-574)||(10499070-10499129)
chr3 (517-574)||(4844472-4844529)
chr3 (517-574)||(4870168-4870225)
chr3 (518-574)||(44069817-44069873)
chr3 (519-574)||(51903839-51903894)
chr3 (517-574)||(10445100-10445157)
chr3 (517-574)||(44743816-44743873)
chr3 (518-574)||(8075088-8075144)
chr3 (519-574)||(30232390-30232445)
chr3 (517-574)||(8051272-8051329)
chr3 (517-562)||(8456252-8456297)
chr3 (518-571)||(19716256-19716309)
chr3 (517-562)||(26108342-26108387)
chr3 (520-573)||(27923005-27923058)
chr3 (517-562)||(30807255-30807300)
chr3 (517-562)||(35492961-35493006)
chr3 (518-571)||(47236935-47236988)
chr3 (518-562)||(2511399-2511443)
chr3 (518-566)||(8170731-8170779)
chr3 (527-571)||(9832553-9832597)
chr3 (518-574)||(20501755-20501810)
chr3 (518-558)||(48977439-48977479)
chr3 (514-573)||(16991597-16991656)
chr3 (515-574)||(52769944-52770003)
chr3 (521-574)||(5166490-5166541)
chr3 (517-562)||(15566601-15566646)
chr3 (517-562)||(25289816-25289861)
chr3 (517-562)||(25379811-25379856)
chr3 (527-572)||(26411613-26411658)
chr3 (529-574)||(28766503-28766548)
chr3 (517-562)||(29915371-29915416)
chr3 (517-562)||(29964524-29964569)
chr3 (517-562)||(40940875-40940920)
chr3 (517-562)||(46576398-46576443)
chr3 (517-562)||(49258364-49258409)
chr3 (517-562)||(52455751-52455796)
chr3 (517-562)||(52821737-52821782)
chr3 (517-562)||(53424278-53424323)
[»] chr8 (25 HSPs)
chr8 (517-573)||(968420-968476)
chr8 (514-574)||(8485054-8485114)
chr8 (517-570)||(29858014-29858067)
chr8 (518-574)||(11793482-11793538)
chr8 (518-574)||(11819835-11819891)
chr8 (518-574)||(28783119-28783175)
chr8 (518-574)||(44780075-44780131)
chr8 (518-573)||(33727835-33727890)
chr8 (517-562)||(4718699-4718744)
chr8 (517-562)||(14633008-14633053)
chr8 (517-562)||(15259508-15259553)
chr8 (517-562)||(32879333-32879378)
chr8 (517-562)||(34237757-34237802)
chr8 (517-562)||(39349310-39349355)
chr8 (518-570)||(2203551-2203603)
chr8 (518-562)||(3734725-3734769)
chr8 (518-574)||(6536579-6536635)
chr8 (518-562)||(6953109-6953153)
chr8 (517-573)||(11492035-11492091)
chr8 (518-574)||(18540357-18540413)
chr8 (518-573)||(27750789-27750844)
chr8 (515-574)||(29431067-29431126)
chr8 (517-562)||(4698825-4698870)
chr8 (517-562)||(21603284-21603329)
chr8 (517-558)||(28193528-28193569)
[»] chr5 (27 HSPs)
chr5 (518-574)||(35705045-35705101)
chr5 (515-574)||(30109270-30109328)
chr5 (520-574)||(21589349-21589403)
chr5 (517-574)||(16773865-16773922)
chr5 (517-562)||(18207257-18207302)
chr5 (518-562)||(32059542-32059586)
chr5 (515-574)||(38299589-38299648)
chr5 (517-562)||(27498833-27498878)
chr5 (517-562)||(34310192-34310237)
chr5 (517-562)||(37495097-37495142)
chr5 (517-562)||(38684258-38684303)
chr5 (518-574)||(84883-84939)
chr5 (518-574)||(17028225-17028281)
chr5 (526-574)||(28285319-28285367)
chr5 (542-573)||(18206608-18206639)
chr5 (520-574)||(12877754-12877808)
chr5 (518-571)||(87388-87440)
chr5 (524-573)||(4793042-4793091)
chr5 (517-562)||(8484763-8484808)
chr5 (521-574)||(10054109-10054162)
chr5 (517-562)||(11926604-11926649)
chr5 (517-562)||(13038556-13038601)
chr5 (517-562)||(15641207-15641252)
chr5 (517-562)||(25586982-25587027)
chr5 (521-574)||(29075843-29075896)
chr5 (517-562)||(33709603-33709648)
chr5 (520-573)||(35982749-35982802)
[»] chr2 (31 HSPs)
chr2 (518-574)||(37480134-37480190)
chr2 (520-572)||(37971956-37972008)
chr2 (518-574)||(42602613-42602669)
chr2 (518-573)||(12086091-12086146)
chr2 (518-573)||(42327357-42327412)
chr2 (518-573)||(21195638-21195693)
chr2 (515-574)||(21213825-21213884)
chr2 (518-572)||(19244168-19244222)
chr2 (517-562)||(10582092-10582137)
chr2 (517-562)||(17324816-17324861)
chr2 (517-562)||(25293216-25293261)
chr2 (517-574)||(25637209-25637266)
chr2 (517-562)||(27290638-27290683)
chr2 (517-574)||(37755932-37755989)
chr2 (517-562)||(43374427-43374472)
chr2 (517-562)||(44976256-44976301)
chr2 (518-574)||(1435123-1435178)
chr2 (518-574)||(9318036-9318092)
chr2 (518-574)||(14780565-14780621)
chr2 (518-574)||(41908599-41908655)
chr2 (539-574)||(26773098-26773133)
chr2 (515-566)||(29197345-29197396)
chr2 (515-570)||(39764989-39765044)
chr2 (525-574)||(22363152-22363199)
chr2 (540-574)||(41390304-41390338)
chr2 (517-574)||(2311782-2311839)
chr2 (521-558)||(19174817-19174854)
chr2 (517-562)||(33827675-33827720)
chr2 (517-562)||(36242414-36242459)
chr2 (517-562)||(41314042-41314087)
chr2 (517-562)||(44946155-44946200)
[»] scaffold0032 (1 HSPs)
scaffold0032 (514-573)||(112337-112396)
[»] scaffold0258 (1 HSPs)
scaffold0258 (517-574)||(15284-15341)
[»] scaffold0009 (1 HSPs)
scaffold0009 (515-573)||(19809-19867)
[»] scaffold0217 (1 HSPs)
scaffold0217 (521-562)||(7411-7452)
[»] scaffold0172 (1 HSPs)
scaffold0172 (540-573)||(15739-15772)
[»] scaffold0070 (1 HSPs)
scaffold0070 (517-562)||(40375-40420)
[»] scaffold0019 (1 HSPs)
scaffold0019 (517-562)||(161859-161904)
[»] scaffold0576 (1 HSPs)
scaffold0576 (518-562)||(5184-5228)
[»] scaffold0049 (1 HSPs)
scaffold0049 (518-562)||(66813-66857)
[»] scaffold0026 (1 HSPs)
scaffold0026 (518-562)||(97468-97512)
[»] scaffold0044 (1 HSPs)
scaffold0044 (515-573)||(93003-93061)
[»] scaffold0623 (1 HSPs)
scaffold0623 (517-562)||(1158-1203)
[»] scaffold0366 (1 HSPs)
scaffold0366 (517-562)||(9401-9446)
[»] scaffold0300 (1 HSPs)
scaffold0300 (525-574)||(4406-4455)
[»] scaffold0118 (1 HSPs)
scaffold0118 (517-574)||(41594-41651)


Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 686 - 880
Target Start/End: Original strand, 29438389 - 29438583
Alignment:
Q  686 tagaagtattcatcagtgagaatctgcattggataaatacaagagaactcctaataggaaagttcaggatatacttggaataagttttgatggtttagag 785  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29438389 tagaagtattcatcagtgggaatctgcattggataaatacaagagaactcctaataggaaagttcaggatatacttggaataagttttgatggtttagag 29438488  T
Q  786 gagaatgaaaaggaaaattttctttatatagcttatattatgttctccactcttcaaaattggtgcttccaatgaattgttctccaagctttgac 880  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29438489 gagaatgaaaaggaaatttttctttatatagcttatattatgttctccactcttcaaaattggtgcttccaatgaattgttctccaagctttgac 29438583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 592 - 688
Target Start/End: Original strand, 29438081 - 29438179
Alignment:
Q  592 ccattgctaaagctgtgtacaacacaatatatagtcaatttcgatatgcgagttttcttgcaaatgttcgagaaaatgcaagt--tagggttggcctag 688  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  29438081 ccattgctaaagctgtatacaacacaatatatagtcaatttcgatatgcgagttttcttgcaaatgttagagaaaatgcaagtcatagggttggcctag 29438179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 573
Target Start/End: Original strand, 6385921 - 6385976
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  6385921 aggtctcaggttcgattctctccggtgctaatttgggtgggctaatttagcttctt 6385976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 20213102 - 20213156
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||    
T  20213102 gtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 20213156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 22107125 - 22107179
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||    
T  22107125 gtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 22107179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 571
Target Start/End: Original strand, 30127458 - 30127512
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttc 571  Q
    ||||||||||||||||||| ||||||||||||||| ||| || ||||||||||||    
T  30127458 gaggtctcaggttcgattctttccggtgccaatttaggtaggttaatttagcttc 30127512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 31623009 - 31622952
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||| || ||  ||||||| |||||||||||||||||||||||||||||    
T  31623009 gaggtctcaggtttgaatcactccggtgtcaatttgggtgggctaatttagcttcttc 31622952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 8597764 - 8597708
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||| |||| ||||  ||| |||||||||||||||||||||||||||||||||    
T  8597764 aggtctcaagttcaattctctccagtgccaatttgggtgggctaatttagcttcttc 8597708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 14199964 - 14199909
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||| ||||||||||||  ||| |||||||||||| |||||||||||||||    
T  14199964 aggtctcagattcgattccttctagtgtcaatttgggtggactaatttagcttctt 14199909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 574
Target Start/End: Original strand, 14558022 - 14558076
Alignment:
Q  519 ggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||| | |||||| |||||||||||| ||||||||||||||||    
T  14558022 ggtctcaggttcgattc-tcccggtgtcaatttgggtggtctaatttagcttcttc 14558076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 515 - 574
Target Start/End: Original strand, 18263896 - 18263955
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||| ||||||||||||   || |||||||||| ||||||||||||||||||||||    
T  18263896 ttgaggtcccaggttcgattctccccagtgccaatttaggtgggctaatttagcttcttc 18263955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 24334042 - 24333987
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||| ||||   ||||||||||||||||||||||| |||||||||||    
T  24334042 aggtctcaggttcaattctcaccggtgccaatttgggtgggctagtttagcttctt 24333987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 654293 - 654248
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  654293 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 654248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 3222782 - 3222737
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  3222782 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 3222737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 12390475 - 12390520
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  12390475 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 12390520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 15360244 - 15360200
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  15360244 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 15360200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 573
Target Start/End: Original strand, 33549162 - 33549218
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||||||||  || | ||||||||| |||| ||||||||||||||||    
T  33549162 gaggtctcaggttcgattctctcggatgccaatttaggtgagctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 574
Target Start/End: Original strand, 23242066 - 23242101
Alignment:
Q  539 ccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||||||| ||||||||||||    
T  23242066 ccggtgccaatttgggtgggctagtttagcttcttc 23242101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 2484781 - 2484835
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||| |||||||||||  ||||||| ||||||| ||||||||||||| |||||||    
T  2484781 gtctgaggttcgattctctccggtgtcaatttgagtgggctaatttaacttcttc 2484835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 519 - 573
Target Start/End: Complemental strand, 32250866 - 32250812
Alignment:
Q  519 ggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||||||  ||||||| ||||||  ||||| ||||||||||||||    
T  32250866 ggtctcaggttcgattctctccggtgacaatttaagtgggttaatttagcttctt 32250812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 562
Target Start/End: Original strand, 34147399 - 34147441
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  34147399 gtctcaggttcgattccctctggtgccaatttcggtgggctaa 34147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 562
Target Start/End: Original strand, 34160015 - 34160057
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||| || ||||||||||| ||||||||||    
T  34160015 gtctcaggttcgattccctctggtgccaatttcggtgggctaa 34160057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 1344985 - 1345030
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || |||||||||||  |||||||||    
T  1344985 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 1345030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 558
Target Start/End: Original strand, 9239025 - 9239066
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtggg 558  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  9239025 gaggtctcaggttcgattccctctggtgccaatttcggtggg 9239066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 11448921 - 11448966
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||    
T  11448921 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 11448966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 14212942 - 14212987
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| | ||||||||    
T  14212942 gaggtctcaggttcgattccctctggtgccaattttgatgggctaa 14212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 4e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 41487418 - 41487474
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  41487418 aggtctcaggttcgattcttcccggtgccaatttaggtgggctaatttagcttcttc 41487474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 279971 - 279916
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  279971 aggtctcaggttcaattctctccggtgccaatttgggtgggctaatttagcttctt 279916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 4572314 - 4572258
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||| |||||||    
T  4572314 aggtctcaggttcgattctctccggtgtcaatttgggtgggctaatttatcttcttc 4572258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 21558187 - 21558243
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||  || ||||||||||| |||||| |||||||||||||||    
T  21558187 aggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttc 21558243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 30579394 - 30579450
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||   || ||||||||||| ||||||||||||||||||||||    
T  30579394 aggtctcaggttcgattttctctggtgccaatttaggtgggctaatttagcttcttc 30579450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 573
Target Start/End: Complemental strand, 33181224 - 33181172
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||||| ||  ||| ||||||||||||||||||||||||||||    
T  33181224 tctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttctt 33181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 539 - 574
Target Start/End: Complemental strand, 3968650 - 3968615
Alignment:
Q  539 ccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||||||||||||||||||||    
T  3968650 ccggtgccaatttgggtgggctaatttagcttcttc 3968615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 41519127 - 41519072
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||| |||||||   ||||||| ||||||||||||||||||||||||||||    
T  41519127 aggtctcagattcgattatctccggtgtcaatttgggtgggctaatttagcttctt 41519072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 48983750 - 48983695
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||| ||  ||| ||||||||||||||||||||| ||||||    
T  48983750 aggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaacttctt 48983695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 2446370 - 2446423
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||| |||||||||  ||||||||| |||| ||||||||||||||||||||||    
T  2446370 tctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttcttc 2446423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 7176009 - 7175964
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  7176009 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 7175964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 7275331 - 7275376
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  7275331 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 7275376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 567
Target Start/End: Complemental strand, 18056792 - 18056743
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttag 567  Q
    ||||||||||||||||||   ||||||| |||||||||||||||||||||    
T  18056792 aggtctcaggttcgattctccccggtgctaatttgggtgggctaatttag 18056743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 22119942 - 22119987
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  22119942 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 22119987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 29861724 - 29861769
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  29861724 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 29861769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 40543057 - 40543012
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  40543057 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 40543012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 570
Target Start/End: Original strand, 48079701 - 48079754
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    ||||||||||||| |||||  |||||||| |||||| |||||||||||||||||    
T  48079701 gaggtctcaggtttgattctctccggtgctaatttgagtgggctaatttagctt 48079754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 654850 - 654806
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  654850 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 654806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 2751326 - 2751370
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  2751326 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 2751370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 542 - 574
Target Start/End: Complemental strand, 11720953 - 11720921
Alignment:
Q  542 gtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||||||||||||||||    
T  11720953 gtgccaatttgggtgggctaatttagcttcttc 11720921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 15137612 - 15137668
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| |||||  || |||| |||||||||||||||||||||| ||||||    
T  15137612 aggtctcaggttagattctctctggtgtcaatttgggtgggctaatttagtttcttc 15137668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 17041029 - 17040973
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||  ||  |||||||||||||||||  ||||||||||||||    
T  17041029 aggtctcaggttcgattctctcaagtgccaatttgggtgggtcaatttagcttcttc 17040973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 25132395 - 25132340
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||||    
T  25132395 aggtctcaggttcgattc-tcccaatgctaatttgggtgggctaatttagcttcttc 25132340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 573
Target Start/End: Complemental strand, 5273587 - 5273552
Alignment:
Q  538 tccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||||||||||||| |||||||||||    
T  5273587 tccggtgccaatttgggtgggctagtttagcttctt 5273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 574
Target Start/End: Complemental strand, 9183206 - 9183152
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||   || |||| |||||||||||||||||||||| ||||||    
T  9183206 gtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttcttc 9183152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 2103109 - 2103154
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || || |||||||| ||||||||||    
T  2103109 gaggtctcaggttcgattccctctggagccaatttcggtgggctaa 2103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Original strand, 2344357 - 2344398
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||| |||||||||||| ||||||||||| ||||||||||    
T  2344357 tctcagattcgattccttctggtgccaattttggtgggctaa 2344398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 10091242 - 10091287
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || || |||||||| ||||||||||    
T  10091242 gaggtctcaggttcgattccctctggagccaatttcggtgggctaa 10091287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 11997903 - 11997948
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||| ||||||    
T  11997903 gaggtctcaggttcgattccctctggtgccaatttcggttggctaa 11997948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 20335849 - 20335792
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||   ||| || |||||||| |||||||||||| |||||||    
T  20335849 gaggtctcaggttcgattctcaccgatgtcaatttggatgggctaatttaacttcttc 20335792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 21217980 - 21217935
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||    
T  21217980 gaggtctcaggttcgattccctctgatgccaatttcggtgggctaa 21217935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 562
Target Start/End: Original strand, 21835209 - 21835250
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||| || ||||||||||| ||||||||||    
T  21835209 tctcaggttcgattccctctggtgccaatttcggtgggctaa 21835250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 22703540 - 22703585
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || |||| |||||| ||||||||||    
T  22703540 gaggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 22703585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 573
Target Start/End: Complemental strand, 22932707 - 22932674
Alignment:
Q  540 cggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||| |||||||||||||||||||||    
T  22932707 cggtgccaatttaggtgggctaatttagcttctt 22932674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 23330885 - 23330844
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggc 559  Q
    ||||||||||||||| ||| |||||||||||||| |||||||    
T  23330885 aggtctcaggttcgactccctccggtgccaatttcggtgggc 23330844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 25590669 - 25590726
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||| |||||||||   | ||||| ||||||| |||||||||||||||||||||    
T  25590669 gaggtctcgggttcgattttcttcggtgtcaatttgagtgggctaatttagcttcttc 25590726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 27009413 - 27009458
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||| || || ||||||||||| ||||||||||    
T  27009413 gaggtctcaggttcgatcccctctggtgccaatttcggtgggctaa 27009458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Original strand, 28647024 - 28647065
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggc 559  Q
    ||||||||||||||||||| || ||||||||||| |||||||    
T  28647024 aggtctcaggttcgattccctctggtgccaatttcggtgggc 28647065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 28950925 - 28950970
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||| ||| || ||||||||||| ||||||||||    
T  28950925 gaggtctcaggttcgactccctctggtgccaatttcggtgggctaa 28950970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 571
Target Start/End: Complemental strand, 38374616 - 38374563
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttc 571  Q
    |||||| |||||||||||   ||||||||||||| ||||||||| |||||||||    
T  38374616 aggtcttaggttcgattctccccggtgccaatttaggtgggctagtttagcttc 38374563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 574
Target Start/End: Complemental strand, 43663109 - 43663056
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| ||  ||||||  |||||||||||| ||||||||||||||||    
T  43663109 tctcaggttcgaatctctccggtatcaatttgggtggactaatttagcttcttc 43663056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 4e-16; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 521 - 573
Target Start/End: Complemental strand, 51250536 - 51250484
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  51250536 tctcaagttcgattccctccggtgccaatttgggtgggctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 2732055 - 2732109
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  2732055 gtctcaggttcgattctctccggtgccaatttgggtgggctagtttagcttcttc 2732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 28635754 - 28635811
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||| |||||||||||  || ||||||||||||||||||||||||||||||||||    
T  28635754 gaggtcttaggttcgattctctctggtgccaatttgggtgggctaatttagcttcttc 28635811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 573
Target Start/End: Original strand, 46295156 - 46295211
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||   ||||||||||||||||||||||| |||||||||||    
T  46295156 aggtctcaggttcgattctccccggtgccaatttgggtgggctagtttagcttctt 46295211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 51954172 - 51954229
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||| ||||   ||||||| |||||||||||||||||||||||||||||    
T  51954172 gaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttcttc 51954229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 570
Target Start/End: Complemental strand, 55427218 - 55427165
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    |||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  55427218 gaggtctcaggttcgattctccgcggtgccaatttgggtgggctaatttagctt 55427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 7949471 - 7949415
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||  || |||| |||||| ||||||||||||||||||||||    
T  7949471 aggtctcaggttcgattctctctggtgtcaatttaggtgggctaatttagcttcttc 7949415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 8030221 - 8030165
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||| |||||||||| ||  ||| |||||||||||||||||||||||||||||    
T  8030221 aggtctcaagttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8030165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 9693515 - 9693459
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||| ||  ||| ||||||||||||||||||||| |||||||    
T  9693515 aggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttaccttcttc 9693459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 515 - 574
Target Start/End: Complemental strand, 49262704 - 49262645
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||||   || |||||||||| ||||||||||||||| ||||||    
T  49262704 ttgaggtctcaggttcgattctccccagtgccaatttaggtgggctaatttagtttcttc 49262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 573
Target Start/End: Original strand, 51622544 - 51622599
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||| ||  || ||||||||||||||||||| |||||||||||||    
T  51622544 aggtctcaggttcgactctctctggtgccaatttgggtgggccaatttagcttctt 51622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 8034843 - 8034896
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||| |||| |||||||||||||||| ||||||| |||||||||||||    
T  8034843 gtctcaggttcaattctttccggtgccaatttgagtgggct-atttagcttcttc 8034896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 564
Target Start/End: Original strand, 51535664 - 51535710
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatt 564  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||    
T  51535664 aggtctcaggttcgattccctctggtgccaattttggtgggctaatt 51535710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 570
Target Start/End: Complemental strand, 19238595 - 19238542
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    |||||||| ||||||||||   ||||| ||||||||||||||||||||||||||    
T  19238595 gaggtctcgggttcgattctccccggtaccaatttgggtgggctaatttagctt 19238542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 27528942 - 27528897
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  27528942 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 27528897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 25852265 - 25852309
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  25852265 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 25852309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 573
Target Start/End: Complemental strand, 32046682 - 32046626
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||| |||||||||||||||||||||||||| | || | || |||||||||||    
T  32046682 gaggtctcgggttcgattccttccggtgccaatttagatgagttagtttagcttctt 32046626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 38869827 - 38869883
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||| || |||||||||||| | ||| || ||||||||||||    
T  38869827 aggtctcaggttcgattccctctggtgccaatttgagggggttagtttagcttcttc 38869883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 46329223 - 46329279
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||| ||||||||||||| | |||||||||||||||||  |||||||||| ||||||    
T  46329223 aggtatcaggttcgattcttcccggtgccaatttgggtaagctaatttagtttcttc 46329279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 574
Target Start/End: Complemental strand, 12793919 - 12793872
Alignment:
Q  527 gttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||  || ||||||||||| ||||||||||||||||||||||    
T  12793919 gttcgattctctctggtgccaatttaggtgggctaatttagcttcttc 12793872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 574
Target Start/End: Complemental strand, 47386811 - 47386752
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||| ||||  ||  ||| |||||| ||||||||||||||||||||||    
T  47386811 ttgaggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttcttc 47386752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 527 - 573
Target Start/End: Complemental strand, 3611701 - 3611655
Alignment:
Q  527 gttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||  |||||| |||||| |||||||||||||||||||||    
T  3611701 gttcgattccccccggtgtcaatttaggtgggctaatttagcttctt 3611655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 574
Target Start/End: Complemental strand, 27105043 - 27104989
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||| |||||||||||  ||||||| ||||||| ||||||||||||| |||||||    
T  27105043 gtctgaggttcgattctctccggtgtcaatttgagtgggctaatttaacttcttc 27104989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 544 - 574
Target Start/End: Original strand, 56440487 - 56440517
Alignment:
Q  544 gccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||||||||||||||    
T  56440487 gccaatttgggtgggctaatttagcttcttc 56440517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 570
Target Start/End: Complemental strand, 19229226 - 19229173
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    |||||||||||||||||||   | ||| |||||||||||||||| |||||||||    
T  19229226 gaggtctcaggttcgattctccctggtaccaatttgggtgggcttatttagctt 19229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 22625217 - 22625172
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || || |||||||| ||||||||||    
T  22625217 gaggtctcaggttcgattccctctggagccaatttcggtgggctaa 22625172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 22630332 - 22630291
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggc 559  Q
    ||||||||||||||||||| || ||||||||||| |||||||    
T  22630332 aggtctcaggttcgattccctctggtgccaattttggtgggc 22630291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 32986247 - 32986292
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||    
T  32986247 gaggtctcaggttcaattccctctggtgccaatttcggtgggctaa 32986292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 33696426 - 33696381
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||| ||||| || ||||||||||| ||||||||||    
T  33696426 gaggtctcaggttcaattccctctggtgccaatttcggtgggctaa 33696381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 34723849 - 34723894
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||| ||||||||||||||| || ||||||||||| ||||||||||    
T  34723849 gaggcctcaggttcgattccctctggtgccaatttcggtgggctaa 34723894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 34844905 - 34844860
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||    
T  34844905 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 34844860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 40058999 - 40058954
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||    
T  40058999 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 40058954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 49287908 - 49287953
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||    
T  49287908 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 49287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 52983669 - 52983714
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || |||||||||||  |||||||||    
T  52983669 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 52983714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 4e-16; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 518 - 570
Target Start/End: Original strand, 51814553 - 51814605
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  51814553 aggtctcaggttcgattctctccggtgccaatttgggtgggctaatttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 6122853 - 6122909
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||    
T  6122853 aggtctcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 6122909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 12587328 - 12587384
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  12587328 gaggtctcaggttcgattctctccggtgc-aatttaggtgggctaatttagcttcttc 12587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 16893452 - 16893509
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||   ||||||| ||||||| |||||||||||||||||||||    
T  16893452 gaggtctcaggttcgattttctccggtgtcaatttgagtgggctaatttagcttcttc 16893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 527 - 574
Target Start/End: Complemental strand, 31794272 - 31794225
Alignment:
Q  527 gttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||| || |||| |||||||||||||||||||||||||||||    
T  31794272 gttcgattccctctggtgtcaatttgggtgggctaatttagcttcttc 31794225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 1205445 - 1205387
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||| ||||||||  |||||||  |||||||||||||||| |||||||||||    
T  1205445 ttgaggtctcaagttcgattttttccggtatcaatttgggtgggctagtttagcttctt 1205387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 539 - 573
Target Start/End: Original strand, 17297065 - 17297099
Alignment:
Q  539 ccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||||||||||||||||||||||||    
T  17297065 ccggtgccaatttgggtgggctaatttagcttctt 17297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 520 - 574
Target Start/End: Complemental strand, 23471100 - 23471046
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||  ||||||| ||||||| || ||||||||||||||||||    
T  23471100 gtctcaggttcgattctctccggtgtcaatttgagttggctaatttagcttcttc 23471046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 44961825 - 44961879
Alignment:
Q  519 ggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||||||  ||  ||| ||||||||||||||||||||||||||||    
T  44961825 ggtctcaggttcgattctctctagtgtcaatttgggtgggctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 1094583 - 1094640
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||  ||||||||  |||||||||||||| |||||||||||||| |||||||    
T  1094583 gaggtctcaaattcgattctctccggtgccaatttaggtgggctaatttaacttcttc 1094640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 4621384 - 4621339
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  4621384 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 4621339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 17935819 - 17935864
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||    
T  17935819 gaggtctcaggttcgattccttctagtgccaatttcggtgggctaa 17935864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 574
Target Start/End: Complemental strand, 18037627 - 18037574
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||| |||||||||  ||||||||| |||| ||||||||||||||||||||||    
T  18037627 tctcaagttcgattctctccggtgccgatttaggtgggctaatttagcttcttc 18037574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 24122073 - 24122118
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  24122073 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 24122118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 24674443 - 24674488
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  24674443 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 24674488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 40257457 - 40257514
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||| |||| ||||  ||||||| |||||||||||||||| ||||||||||||    
T  40257457 gaggtctcaagttcaattctatccggtgtcaatttgggtgggctagtttagcttcttc 40257514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 45859190 - 45859145
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  45859190 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 45859145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 168252 - 168296
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  168252 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 168296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 31605865 - 31605809
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||| |||||||||   ||||||||||||||||||||||| |||||| |||||    
T  31605865 aggtctcaagttcgattctccccggtgccaatttgggtgggctagtttagcctcttc 31605809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 570
Target Start/End: Original strand, 45266893 - 45266945
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    ||||||||||||||||||   ||||||||||||||| ||||||| ||||||||    
T  45266893 aggtctcaggttcgattctccccggtgccaatttggatgggctagtttagctt 45266945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 46607861 - 46607905
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  46607861 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 46607905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 574
Target Start/End: Original strand, 9117175 - 9117234
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||||| |||| || | |||||||| | ||||||||| |||||||    
T  9117175 ttgaggtctcaggttcgattctttccagtactaatttgggcgtgctaatttaacttcttc 9117234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 573
Target Start/End: Original strand, 15065024 - 15065079
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||| |||    |||||| ||||||||||||||||||||||||||||    
T  15065024 aggtctcaggttcaattttccccggtgtcaatttgggtgggctaatttagcttctt 15065079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 574
Target Start/End: Complemental strand, 31383814 - 31383759
Alignment:
Q  519 ggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||  |  |||||||||||||||||||||| ||| |||||||    
T  31383814 ggtctcaggttcgattctcttaggtgccaatttgggtgggctaacttaccttcttc 31383759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 523 - 573
Target Start/End: Original strand, 3799970 - 3800020
Alignment:
Q  523 tcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||  ||  |||||||||| |||||||||||||||||||||    
T  3799970 tcaggttcgattctctctagtgccaatttaggtgggctaatttagcttctt 3800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 540 - 570
Target Start/End: Original strand, 24730465 - 24730495
Alignment:
Q  540 cggtgccaatttgggtgggctaatttagctt 570  Q
    |||||||||||||||||||||||||||||||    
T  24730465 cggtgccaatttgggtgggctaatttagctt 24730495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 562
Target Start/End: Complemental strand, 37351605 - 37351563
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| | ||||||||| ||||||||||    
T  37351605 gtctcaggttcgattccttctgatgccaatttcggtgggctaa 37351563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 518 - 567
Target Start/End: Complemental strand, 52029954 - 52029904
Alignment:
Q  518 aggtctcaggttcgattc-cttccggtgccaatttgggtgggctaatttag 567  Q
    |||||||||||||||||| |  ||| |||||||||||||||||||||||||    
T  52029954 aggtctcaggttcgattctcccccgatgccaatttgggtgggctaatttag 52029904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 7578459 - 7578504
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| |  ||||||||||| ||||||||||    
T  7578459 gaggtctcaggttcgattccctatggtgccaatttcggtgggctaa 7578504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 7766874 - 7766829
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||| ||||| ||||||||||    
T  7766874 gaggtctcaggttcgattccctctggtgctaatttcggtgggctaa 7766829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 7946894 - 7946939
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||| |||||||||| || ||||||||||| ||||||||||    
T  7946894 gaggtctcaagttcgattccctctggtgccaatttcggtgggctaa 7946939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 8077697 - 8077742
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||    
T  8077697 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 8077742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 9500502 - 9500457
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||    
T  9500502 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 9500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 15059549 - 15059504
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||    
T  15059549 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 15059504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 18646903 - 18646948
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||    
T  18646903 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 18646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 23734166 - 23734211
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||    
T  23734166 gaggtctcaggttcgattccctctgatgccaatttcggtgggctaa 23734211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 23741358 - 23741403
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||    
T  23741358 gaggtctcaggttcgattccctctgatgccaatttcggtgggctaa 23741403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 46113549 - 46113504
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||| ||||||| ||||||||||    
T  46113549 gaggtctcaggttcgattccctctggtaccaatttcggtgggctaa 46113504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 574
Target Start/End: Complemental strand, 10499129 - 10499070
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||||  |||| || |||||||||||||||||||||||||||||    
T  10499129 ttgaggtctcaggttcgattctctccgatgtcaatttgggtgggctaatttagcttcttc 10499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 4844529 - 4844472
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||||    
T  4844529 gaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 4870225 - 4870168
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||| |||||||  ||||||||||||||| |||||||||||||||||||||    
T  4870225 gaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatttagcttcttc 4870168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 44069817 - 44069873
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||||    
T  44069817 aggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttcttc 44069873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 519 - 574
Target Start/End: Complemental strand, 51903894 - 51903839
Alignment:
Q  519 ggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||  ||||||| ||||||| |||||||||||||||||||||    
T  51903894 ggtctcaggttcgattctctccggtgtcaatttgagtgggctaatttagcttcttc 51903839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 10445157 - 10445100
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||  || ||||| |||||| |||||||||||||||||||||    
T  10445157 gaggtctcaggttcgattctctctggtgctaatttgagtgggctaatttagcttcttc 10445100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 44743873 - 44743816
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||   ||| ||||||||||||||||| |||||||||||||||    
T  44743873 gaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttc 44743816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 8075144 - 8075088
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||| |||||||||||||| ||  ||| |||||||||||||||||||||||||||||    
T  8075144 aggtttcaggttcgattccctctagtgtcaatttgggtgggctaatttagcttcttc 8075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 574
Target Start/End: Original strand, 30232390 - 30232445
Alignment:
Q  519 ggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| ||||  |||||||||||||||| ||||||||||||||| ||||    
T  30232390 ggtctcaggttccattctctccggtgccaatttggttgggctaatttagctacttc 30232445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 8051272 - 8051329
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||| |||||||||| |||||||||||||| | ||||||  ||||||||||||    
T  8051272 gaggtctcaagttcgattccctccggtgccaatttagttgggctcgtttagcttcttc 8051329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 8456297 - 8456252
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  8456297 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 8456252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 571
Target Start/End: Original strand, 19716256 - 19716309
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttc 571  Q
    ||||||| ||||||||||   |||||| ||||||||||||||||||||||||||    
T  19716256 aggtctctggttcgattctccccggtgacaatttgggtgggctaatttagcttc 19716309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 26108342 - 26108387
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  26108342 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 26108387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 573
Target Start/End: Complemental strand, 27923058 - 27923005
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||||||  || ||| |||||||||||| |||||||||||||||    
T  27923058 gtctcaggttcgattcccacctgtgtcaatttgggtggactaatttagcttctt 27923005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 30807300 - 30807255
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  30807300 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 30807255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 35492961 - 35493006
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  35492961 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 35493006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 571
Target Start/End: Complemental strand, 47236988 - 47236935
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttc 571  Q
    |||||||| |||||||||   |||||||||||||||||||||| ||||||||||    
T  47236988 aggtctcatgttcgattctccccggtgccaatttgggtgggcttatttagcttc 47236935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 2511443 - 2511399
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  2511443 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 2511399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 566
Target Start/End: Original strand, 8170731 - 8170779
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaattta 566  Q
    ||||||||||||||||| | || |||| |||||||||||||||||||||    
T  8170731 aggtctcaggttcgatttcctctggtgtcaatttgggtgggctaattta 8170779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 527 - 571
Target Start/End: Original strand, 9832553 - 9832597
Alignment:
Q  527 gttcgattccttccggtgccaatttgggtgggctaatttagcttc 571  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||    
T  9832553 gttcgattccttctagtgccaatttgggtggggtaatttagcttc 9832597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 20501755 - 20501810
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||  ||| ||||||||||| | |||||||||||||||||||    
T  20501755 aggtctcaggttcgattctctccagtgccaatttgag-gggctaatttagcttcttc 20501810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 558
Target Start/End: Original strand, 48977439 - 48977479
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtggg 558  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  48977439 aggtctcaggttcgattccttctggtgccaatttcggtggg 48977479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 514 - 573
Target Start/End: Original strand, 16991597 - 16991656
Alignment:
Q  514 tttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||| || |||||  |||| |||||||||  ||||||||||||||||||||    
T  16991597 tttgaggtctcagttttgattctctccgatgccaatttatgtgggctaatttagcttctt 16991656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 574
Target Start/End: Complemental strand, 52770003 - 52769944
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||||  |   ||| |||||| ||||||||||||||||||||||    
T  52770003 ttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttc 52769944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 5166490 - 5166541
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||  ||||||||||| || ||| ||||||||||||||||||    
T  5166490 tctcaggttcgattc--tccggtgccaagttaggttggctaatttagcttcttc 5166541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 15566646 - 15566601
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| ||  |||||||||| ||||||||||    
T  15566646 gaggtctcaggttcgattccctctagtgccaatttcggtgggctaa 15566601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 25289861 - 25289816
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| ||  |||||||||| ||||||||||    
T  25289861 gaggtctcaggttcgattccctctagtgccaatttcggtgggctaa 25289816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 25379811 - 25379856
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||||||  |||||||||| || |||||||    
T  25379811 gaggtctcaggttcgattccttctagtgccaatttcggagggctaa 25379856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 572
Target Start/End: Original strand, 26411613 - 26411658
Alignment:
Q  527 gttcgattccttccggtgccaatttgggtgggctaatttagcttct 572  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||    
T  26411613 gttcgattcttctcggtgccaatttggatgggctaatttagcttct 26411658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 574
Target Start/End: Original strand, 28766503 - 28766548
Alignment:
Q  529 tcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||  |||||| ||||||||||||||||| ||||||||||||    
T  28766503 tcgattctgtccggtaccaatttgggtgggctagtttagcttcttc 28766548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 29915416 - 29915371
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||    
T  29915416 gaggtctcaggttcgatttcttctggtgccattttcggtgggctaa 29915371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 29964569 - 29964524
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||| |||| ||||||| ||| ||||||||||    
T  29964569 gaggtctcaggttcgatttcttctggtgccattttcggtgggctaa 29964524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 40940875 - 40940920
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||| ||||    
T  40940875 gaggtctcaggttcgattccctctggtgccaatttcggtggactaa 40940920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 46576398 - 46576443
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || |||||||||||  |||||||||    
T  46576398 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 46576443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 49258409 - 49258364
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| ||  |||||||||| ||||||||||    
T  49258409 gaggtctcaggttcgattccctctagtgccaatttcggtgggctaa 49258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 52455796 - 52455751
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| | ||||||||    
T  52455796 gaggtctcaggttcgattccctctggtgccaattttgatgggctaa 52455751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 52821782 - 52821737
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| |||| |||||    
T  52821782 gaggtctcaggttcgattccctctggtgccaatttcggtgagctaa 52821737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 53424323 - 53424278
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| |  ||||||||||| ||||||||||    
T  53424323 gaggtctcaggttcgattccctttggtgccaatttcggtgggctaa 53424278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 517 - 573
Target Start/End: Original strand, 968420 - 968476
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||||||||||||  |||| ||||||||| |||||||||||||||||||||    
T  968420 gaggtctcaggttcgattctctccgatgccaatttaggtgggctaatttagcttctt 968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 514 - 574
Target Start/End: Original strand, 8485054 - 8485114
Alignment:
Q  514 tttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||  ||||||||  |||||||||||||| ||||||||||||||||||||||    
T  8485054 tttgaggtctcattttcgattctctccggtgccaatttaggtgggctaatttagcttcttc 8485114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 570
Target Start/End: Complemental strand, 29858067 - 29858014
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    ||||||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  29858067 gaggtctcaggttcgattcccctcggtgccaatttaggtgggctaatttagctt 29858014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 11793538 - 11793482
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||| ||||| ||||| | ||||||||||||||||||||||| ||||||||||||    
T  11793538 aggtcttaggtttgattcttcccggtgccaatttgggtgggctagtttagcttcttc 11793482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 11819835 - 11819891
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||  ||  ||| |||||||||||||||||||||||||||||    
T  11819835 aggtctcaggttcgattcactctagtgtcaatttgggtgggctaatttagcttcttc 11819891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 28783119 - 28783175
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||| |||||||||    |||||||||||||||||||||||||||||||||||    
T  28783119 aggtctcatgttcgattctcctcggtgccaatttgggtgggctaatttagcttcttc 28783175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 44780131 - 44780075
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| |||||| ||  ||| |||||||||||||||||||||||||||||    
T  44780131 aggtctcaggtttgattccctctagtgtcaatttgggtgggctaatttagcttcttc 44780075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 33727890 - 33727835
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||| ||  ||| |||||||| |||||||||||||||||||    
T  33727890 aggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 33727835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 4718699 - 4718744
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  4718699 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 4718744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 14633008 - 14633053
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  14633008 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 14633053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 15259553 - 15259508
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  15259553 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 15259508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 32879333 - 32879378
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  32879333 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 32879378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 34237802 - 34237757
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  34237802 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 34237757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 39349310 - 39349355
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  39349310 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 39349355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 570
Target Start/End: Original strand, 2203551 - 2203603
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    |||||||||| || ||||   ||||||||||||||||||||||||||||||||    
T  2203551 aggtctcagggtcaattctccccggtgccaatttgggtgggctaatttagctt 2203603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 3734769 - 3734725
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  3734769 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 3734725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 6536579 - 6536635
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||| ||||  || ||||||||||| |||||| |||||||||||||||    
T  6536579 aggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 6953153 - 6953109
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  6953153 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 6953109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 517 - 573
Target Start/End: Complemental strand, 11492091 - 11492035
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||| |||||||||||  | | ||| ||||||||||||||||||||||||||||    
T  11492091 gaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttctt 11492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 18540357 - 18540413
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||  || |||||||||||| | ||| |||||||||||||||    
T  18540357 aggtctcaggttcgattctctctggtgccaatttgagagggttaatttagcttcttc 18540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 573
Target Start/End: Original strand, 27750789 - 27750844
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||| ||  ||| |||||||| ||| |||||||||||||||    
T  27750789 aggtctcaggttcgattccctctagtgtcaatttggatggactaatttagcttctt 27750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 574
Target Start/End: Original strand, 29431067 - 29431126
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||| ||||||||||||||  |  ||||| |||||| |||||||||||||||||||||    
T  29431067 ttgaggcctcaggttcgattctctttggtgctaatttgagtgggctaatttagcttcttc 29431126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 4698870 - 4698825
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || |||| |||||| ||||||||||    
T  4698870 gaggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 4698825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 21603284 - 21603329
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| |  ||||||||||| ||||||||||    
T  21603284 gaggtctcaggttcgattccctatggtgccaatttcggtgggctaa 21603329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 558
Target Start/End: Original strand, 28193528 - 28193569
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtggg 558  Q
    |||||||||||||||||||| || ||||||||||| ||||||    
T  28193528 gaggtctcaggttcgattccctctggtgccaatttcggtggg 28193569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 35705045 - 35705101
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||||||||||||    
T  35705045 aggtctcaggttcgattctccccggtgtcaatttgggtgggctaatttagcttcttc 35705101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 574
Target Start/End: Complemental strand, 30109328 - 30109270
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||    
T  30109328 ttgaggtctcaggttcgattccc-ccggtgctaatttaggtgggctaatttagcttcttc 30109270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 21589349 - 21589403
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||| || ||||||||||| ||||||||| ||||||||||||    
T  21589349 gtctcaggttcgattccctctggtgccaatttaggtgggctagtttagcttcttc 21589403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 16773865 - 16773922
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||  || | ||||||||| ||||||||||||||||||||||    
T  16773865 gaggtctcaggttcgattctctctgatgccaatttaggtgggctaatttagcttcttc 16773922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 18207257 - 18207302
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||    
T  18207257 gaggtctcaggttcgattccctccggtgccaatttcggtgggctaa 18207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 32059586 - 32059542
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||    
T  32059586 aggtctcaggttcgattccttctggtgccaatttcggtgggctaa 32059542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 515 - 574
Target Start/End: Original strand, 38299589 - 38299648
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| |||||||   |||||||| |||||| |||||||||||||||||||||    
T  38299589 ttgaggtctcagattcgattttctccggtgctaatttgcgtgggctaatttagcttcttc 38299648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 27498878 - 27498833
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  27498878 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 27498833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 34310192 - 34310237
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  34310192 gaggtctcaggttcgattccctctggtgccaattttggtgggctaa 34310237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 37495097 - 37495142
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  37495097 gaggtctcaggttcgattccctctggtgccaattttggtgggctaa 37495142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 38684258 - 38684303
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  38684258 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 38684303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 84883 - 84939
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||| |||||||||   ||||||||| | ||||||||||||||||||||||||    
T  84883 aggtctcaagttcgattctccccggtgccattatgggtgggctaatttagcttcttc 84939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 17028281 - 17028225
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| |||||| ||  ||| |||||| ||||||||||||||||||||||    
T  17028281 aggtctcaggtttgattccctctagtgtcaatttaggtgggctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 574
Target Start/End: Original strand, 28285319 - 28285367
Alignment:
Q  526 ggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||| |||  ||| |||||||||||||||||||||||||||||    
T  28285319 ggttcgattctttctagtgtcaatttgggtgggctaatttagcttcttc 28285367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 573
Target Start/End: Complemental strand, 18206639 - 18206608
Alignment:
Q  542 gtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||||||||||||||||    
T  18206639 gtgccaatttgggtgggctaatttagcttctt 18206608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 12877754 - 12877808
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||  || ||| | ||||| ||||||||||||||||||||||    
T  12877754 gtctcaggttcgattctctctggtactaatttaggtgggctaatttagcttcttc 12877808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 571
Target Start/End: Complemental strand, 87440 - 87388
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttc 571  Q
    |||||||||||| ||||||| || ||| ||||||| ||||||||||||||||||    
T  87440 aggtctcaggtttgattcct-ccagtgtcaatttgagtgggctaatttagcttc 87388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 524 - 573
Target Start/End: Complemental strand, 4793091 - 4793042
Alignment:
Q  524 caggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||   || |||||||||| |||||||||||||||||||||    
T  4793091 caggttcgattctccccagtgccaatttaggtgggctaatttagcttctt 4793042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 8484808 - 8484763
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||| |||||| || ||||||||||| ||||||||||    
T  8484808 gaggtctcaggtttgattccctctggtgccaatttcggtgggctaa 8484763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 10054109 - 10054162
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||  |||| |  ||| |||||||||||||||||||||||||    
T  10054109 tctcaggttcgattctctccgatatcaacttgggtgggctaatttagcttcttc 10054162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 11926649 - 11926604
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||| |||||| || ||||||||||| ||||||||||    
T  11926649 gaggtctcaggttagattccctctggtgccaatttcggtgggctaa 11926604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 13038601 - 13038556
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| | ||||||||    
T  13038601 gaggtctcaggttcgattccctctggtgccaattttgatgggctaa 13038556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 15641252 - 15641207
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || || |||||||| ||||||||||    
T  15641252 gaggtctcaggttcgattccctctggagccaatttcggtgggctaa 15641207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 25586982 - 25587027
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||| | || ||||||||||| ||||||||||    
T  25586982 gaggtctcaggttcgatttcctctggtgccaatttcggtgggctaa 25587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 574
Target Start/End: Original strand, 29075843 - 29075896
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||| |||||||||  || ||||||||||| | ||||||||||||||||||||    
T  29075843 tctcatgttcgattctctctggtgccaatttagatgggctaatttagcttcttc 29075896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 33709648 - 33709603
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||| |||||||||| || ||||||||||| ||||||||||    
T  33709648 gaggtctcaagttcgattccctctggtgccaatttcggtgggctaa 33709603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 573
Target Start/End: Original strand, 35982749 - 35982802
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||  |||| ||| ||||||| || ||||||||||||||||    
T  35982749 gtctcaggttcgattctatccgatgctaatttggatgcgctaatttagcttctt 35982802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 37480134 - 37480190
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||   ||||| ||||||||||||||||||||||||||||||    
T  37480134 aggtctcaggttcgattctccccggtcccaatttgggtgggctaatttagcttcttc 37480190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 520 - 572
Target Start/End: Original strand, 37971956 - 37972008
Alignment:
Q  520 gtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttct 572  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  37971956 gtctcaggttcgattctctccggtgccaatttaggtgggctaatttagcttct 37972008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 42602613 - 42602669
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||| ||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  42602613 aggtcttaggtttgattctctccggtgccaatttgggtgggctaatttagcttcttc 42602669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 12086146 - 12086091
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  12086146 aggtctcgggttcgattccctccggtgctaatttaggtgggctaatttagcttctt 12086091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 42327412 - 42327357
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||  | ||||||||||||||||||||||||||||| ||||    
T  42327412 aggtctcaggttcgattctcttcggtgccaatttgggtgggctaatttagcatctt 42327357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 573
Target Start/End: Complemental strand, 21195693 - 21195638
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||| ||  ||| |||||||| |||||||||||||||||||    
T  21195693 aggtctcaggttcgattccctctagtgtcaatttggatgggctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 515 - 574
Target Start/End: Original strand, 21213825 - 21213884
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||||   ||||||||||||| ||||||||| ||| ||||||||    
T  21213825 ttgaggtctcaggttcgattctccccggtgccaatttaggtgggctagttttgcttcttc 21213884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 572
Target Start/End: Original strand, 19244168 - 19244222
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttct 572  Q
    ||||||||||||||||||  || |||||||||||| |||||||||||||| ||||    
T  19244168 aggtctcaggttcgattctctctggtgccaatttgagtgggctaatttagtttct 19244222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 10582137 - 10582092
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  10582137 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 10582092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 17324816 - 17324861
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  17324816 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 17324861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 25293216 - 25293261
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  25293216 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 25293261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 25637209 - 25637266
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||| |||  |||| ||||||||| |||||||||||||| |||||||    
T  25637209 gaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttcttc 25637266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 27290638 - 27290683
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||    
T  27290638 gaggtctcaggttcgattcccttcggtgccaatttcggtgggctaa 27290683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 37755989 - 37755932
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||| |||||| ||| || | |||||||||| |||||||||||||||||||||    
T  37755989 gaggtctcaagttcgactccctctgatgccaatttgagtgggctaatttagcttcttc 37755932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 43374472 - 43374427
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  43374472 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 43374427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 44976301 - 44976256
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  44976301 gaggtctcaggttcgattccctctggtgccaattttggtgggctaa 44976256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 1435123 - 1435178
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||| ||||||||  || |||| |||||||||||||||||||||||||||||    
T  1435123 aggtctcag-ttcgattctctctggtgtcaatttgggtgggctaatttagcttcttc 1435178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 9318092 - 9318036
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||  || | |||||||| |||||||||||||||| ||||||    
T  9318092 aggtctcaggttcgattctctctgatgccaattcgggtgggctaatttagtttcttc 9318036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Original strand, 14780565 - 14780621
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||| |   ||| |||||||||| |||||||||||||||||||||    
T  14780565 aggtctcaggttcgatcctccccgatgccaatttgagtgggctaatttagcttcttc 14780621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 574
Target Start/End: Complemental strand, 41908655 - 41908599
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||| ||||||||    ||||||||||||||||||||||| ||||||||||||    
T  41908655 aggtctcaagttcgattatccccggtgccaatttgggtgggctagtttagcttcttc 41908599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 574
Target Start/End: Complemental strand, 26773133 - 26773098
Alignment:
Q  539 ccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||| |||||||||||||||||||||||||||||    
T  26773133 ccggtgtcaatttgggtgggctaatttagcttcttc 26773098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 566
Target Start/End: Complemental strand, 29197396 - 29197345
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaattta 566  Q
    |||| |||||| ||||||||| | ||||||||||||| ||||||||||||||    
T  29197396 ttgatgtctcatgttcgattcttcccggtgccaatttaggtgggctaattta 29197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 570
Target Start/End: Original strand, 39764989 - 39765044
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagctt 570  Q
    |||||||||||||||||||||| ||  ||| |||||| | ||||||||||||||||    
T  39764989 ttgaggtctcaggttcgattccctctagtgtcaatttagctgggctaatttagctt 39765044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 525 - 574
Target Start/End: Complemental strand, 22363199 - 22363152
Alignment:
Q  525 aggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| ||||||||||||||||  ||| |||||||||||||||    
T  22363199 aggttcgattccctccggtgccaatttgg--gggttaatttagcttcttc 22363152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 540 - 574
Target Start/End: Original strand, 41390304 - 41390338
Alignment:
Q  540 cggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||||||||||| |||||||    
T  41390304 cggtgccaatttgggtgggctaatttaacttcttc 41390338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 2311782 - 2311839
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    ||||||||||||||||||   | ||||| ||||||| |||||||||||| ||||||||    
T  2311782 gaggtctcaggttcgattttcttcggtgtcaatttgagtgggctaatttggcttcttc 2311839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 19174817 - 19174854
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtggg 558  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  19174817 tctcaggttcgattccttctggtgccaatttcggtggg 19174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 33827720 - 33827675
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| | ||||||||    
T  33827720 gaggtctcaggttcgattccctctggtgccaatttcgttgggctaa 33827675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 36242459 - 36242414
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || |||| |||||| ||||||||||    
T  36242459 gaggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 36242414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 41314042 - 41314087
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || |||| |||||| ||||||||||    
T  41314042 gaggtctcaggttcgattccctctggtgtcaatttcggtgggctaa 41314087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 44946200 - 44946155
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| |  ||||||||||| ||||||||||    
T  44946200 gaggtctcaggttcgattccctttggtgccaatttcggtgggctaa 44946155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 514 - 573
Target Start/End: Original strand, 112337 - 112396
Alignment:
Q  514 tttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    |||||||||| |||||||||||  |||||||||||||| ||||| |||||||||||||||    
T  112337 tttgaggtctgaggttcgattctctccggtgccaatttaggtggactaatttagcttctt 112396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 15341 - 15284
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||||||||  || | ||||||||| ||||||||||||||||||||||    
T  15341 gaggtctcaggttcgattctctcggatgccaatttaggtgggctaatttagcttcttc 15284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 573
Target Start/End: Complemental strand, 19867 - 19809
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||| ||||||||| ||||| ||  ||||||||||||||| |||||||||||    
T  19867 ttgaggtctcaagttcgattctttccgatgttaatttgggtgggctagtttagcttctt 19809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 562
Target Start/End: Complemental strand, 7452 - 7411
Alignment:
Q  521 tctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  7452 tctcaggttcgattccctccggtgccaatttcggtgggctaa 7411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 573
Target Start/End: Complemental strand, 15772 - 15739
Alignment:
Q  540 cggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||||||||||||||||||||||||||||    
T  15772 cggtgccaatttgggtgggctaatttagcttctt 15739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 40375 - 40420
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  40375 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 40420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 562
Target Start/End: Original strand, 161859 - 161904
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || ||||||||||| ||||||||||    
T  161859 gaggtctcaggttcgattccctctggtgccaatttcggtgggctaa 161904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 5228 - 5184
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  5228 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 5184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Original strand, 66813 - 66857
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  66813 aggtctcacgttcgattccttctggtgccaattttggtgggctaa 66857  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 97512 - 97468
Alignment:
Q  518 aggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||    
T  97512 aggtctcaggttcgattccctctggtgccaatttcggtgggctaa 97468  T

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Target: scaffold0044 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 515 - 573
Target Start/End: Original strand, 93003 - 93061
Alignment:
Q  515 ttgaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttctt 573  Q
    ||||||||| ||||||||||| ||| ||| ||||||| ||||| ||||||||| |||||    
T  93003 ttgaggtctgaggttcgattctttcaggtaccaatttaggtggactaatttagattctt 93061  T

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Target: scaffold0623 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 1203 - 1158
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || || |||||||| ||||||||||    
T  1203 gaggtctcaggttcgattccctctggagccaatttcggtgggctaa 1158  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 9446 - 9401
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaa 562  Q
    |||||||||||||||||||| || || |||||||| ||||||||||    
T  9446 gaggtctcaggttcgattccctctggagccaatttcggtgggctaa 9401  T

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Target: scaffold0300 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 574
Target Start/End: Original strand, 4406 - 4455
Alignment:
Q  525 aggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||| ||  ||| |||||||||||| ||||||||||||||||    
T  4406 aggttcgattccctctagtgtcaatttgggtggactaatttagcttcttc 4455  T

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Target: scaffold0118 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 574
Target Start/End: Complemental strand, 41651 - 41594
Alignment:
Q  517 gaggtctcaggttcgattccttccggtgccaatttgggtgggctaatttagcttcttc 574  Q
    |||||||||||||| ||||  || | || ||||||||||||||||||||||| |||||    
T  41651 gaggtctcaggttcaattctctctgatgtcaatttgggtgggctaatttagcctcttc 41594  T

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