View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF9073_low_16 (Length: 237)

Name: NF9073_low_16
Description: NF9073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF9073_low_16
NF9073_low_16
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-237)||(1565-1801)
scaffold1359 (26-237)||(472-667)
[»] chr7 (85 HSPs)
chr7 (1-237)||(14425508-14425744)
chr7 (1-237)||(27871780-27872018)
chr7 (1-237)||(21381288-21381525)
chr7 (1-204)||(32264610-32264814)
chr7 (1-209)||(19339138-19339347)
chr7 (1-176)||(48062741-48062917)
chr7 (24-229)||(16542879-16543085)
chr7 (24-229)||(16622577-16622783)
chr7 (54-204)||(48236786-48236937)
chr7 (26-209)||(8183025-8183223)
chr7 (26-237)||(28622201-28622419)
chr7 (26-237)||(14426642-14426837)
chr7 (26-237)||(33691561-33691775)
chr7 (11-176)||(4411883-4412049)
chr7 (1-130)||(24794681-24794811)
chr7 (79-207)||(16111765-16111893)
chr7 (96-204)||(33605852-33605960)
chr7 (1-176)||(48805800-48805976)
chr7 (75-209)||(7339763-7339887)
chr7 (16-176)||(4428999-4429162)
chr7 (91-237)||(30945224-30945353)
chr7 (29-161)||(2265446-2265579)
chr7 (26-177)||(4821568-4821720)
chr7 (26-237)||(9709668-9709865)
chr7 (26-237)||(2500133-2500348)
chr7 (26-197)||(44467159-44467334)
chr7 (91-198)||(21695562-21695671)
chr7 (98-237)||(30026073-30026214)
chr7 (1-94)||(1293091-1293184)
chr7 (30-209)||(331744-331927)
chr7 (26-237)||(2913456-2913671)
chr7 (26-237)||(30944191-30944386)
chr7 (29-142)||(15704445-15704559)
chr7 (26-176)||(12174252-12174403)
chr7 (26-198)||(15088615-15088790)
chr7 (136-209)||(5826170-5826243)
chr7 (26-176)||(35952599-35952751)
chr7 (151-237)||(11319642-11319728)
chr7 (151-237)||(13880341-13880427)
chr7 (26-174)||(9069657-9069808)
chr7 (115-199)||(39284452-39284536)
chr7 (151-237)||(13692577-13692664)
chr7 (26-237)||(10883008-10883236)
chr7 (148-209)||(1293182-1293243)
chr7 (158-237)||(14193318-14193398)
chr7 (158-226)||(15468160-15468228)
chr7 (161-209)||(9069810-9069858)
chr7 (150-237)||(13648934-13649022)
chr7 (135-195)||(16556609-16556669)
chr7 (135-195)||(16608993-16609053)
chr7 (151-199)||(28409275-28409323)
chr7 (151-198)||(9098118-9098165)
chr7 (151-198)||(13880828-13880875)
chr7 (26-145)||(21283314-21283436)
chr7 (26-170)||(23279875-23280021)
chr7 (151-198)||(13730566-13730613)
chr7 (151-198)||(16316433-16316480)
chr7 (151-209)||(48805736-48805795)
chr7 (98-145)||(22577962-22578011)
chr7 (91-145)||(11793068-11793124)
chr7 (96-237)||(13018358-13018497)
chr7 (158-199)||(13260498-13260539)
chr7 (91-145)||(13302971-13303027)
chr7 (91-145)||(24788302-24788358)
chr7 (149-198)||(24788345-24788394)
chr7 (185-237)||(2265368-2265420)
chr7 (91-140)||(4494667-4494718)
chr7 (151-199)||(22577896-22577944)
chr7 (166-237)||(13137759-13137830)
chr7 (151-198)||(13303075-13303122)
chr7 (171-209)||(4821729-4821767)
chr7 (185-231)||(4821760-4821806)
chr7 (160-198)||(19236886-19236924)
chr7 (94-145)||(21692451-21692504)
chr7 (151-201)||(35952559-35952609)
chr7 (163-224)||(5000703-5000764)
chr7 (158-199)||(12366623-12366664)
chr7 (91-145)||(16316498-16316554)
chr7 (151-204)||(24794626-24794679)
chr7 (177-237)||(48062664-48062725)
chr7 (165-197)||(4494725-4494757)
chr7 (164-224)||(5685926-5685986)
chr7 (99-144)||(12366690-12366737)
chr7 (165-229)||(14745480-14745544)
chr7 (165-229)||(23264402-23264466)
[»] scaffold0056 (4 HSPs)
scaffold0056 (1-209)||(34641-34850)
scaffold0056 (2-176)||(25535-25710)
scaffold0056 (158-209)||(25487-25538)
scaffold0056 (151-195)||(36013-36057)
[»] chr4 (76 HSPs)
chr4 (1-198)||(17398529-17398726)
chr4 (1-209)||(22190905-22191115)
chr4 (69-209)||(14571161-14571301)
chr4 (26-204)||(10692944-10693123)
chr4 (26-204)||(10906710-10906889)
chr4 (29-197)||(6517581-6517750)
chr4 (1-176)||(40860726-40860902)
chr4 (26-237)||(3105243-3105437)
chr4 (1-209)||(15474985-15475195)
chr4 (26-209)||(413095-413279)
chr4 (2-209)||(39419578-39419786)
chr4 (26-237)||(19884795-19885009)
chr4 (1-209)||(9751382-9751592)
chr4 (26-237)||(54680023-54680218)
chr4 (95-195)||(3793286-3793386)
chr4 (26-237)||(10073028-10073243)
chr4 (1-209)||(38513937-38514148)
chr4 (26-177)||(55731872-55732023)
chr4 (50-176)||(17247360-17247487)
chr4 (26-237)||(13575935-13576132)
chr4 (3-144)||(20977518-20977658)
chr4 (3-144)||(27188548-27188688)
chr4 (25-236)||(56034666-56034878)
chr4 (16-174)||(17700680-17700835)
chr4 (26-233)||(22675345-22675538)
chr4 (3-144)||(3499560-3499702)
chr4 (26-237)||(29680349-29680562)
chr4 (75-181)||(16853626-16853732)
chr4 (139-237)||(16940184-16940282)
chr4 (151-237)||(14604698-14604784)
chr4 (151-237)||(29121608-29121694)
chr4 (26-176)||(8105731-8105883)
chr4 (151-237)||(9141096-9141183)
chr4 (152-209)||(8105889-8105946)
chr4 (26-86)||(16940109-16940169)
chr4 (149-224)||(14904139-14904214)
chr4 (26-145)||(37435431-37435553)
chr4 (26-145)||(45833487-45833609)
chr4 (26-176)||(3395683-3395836)
chr4 (26-172)||(3483814-3483963)
chr4 (159-209)||(20977656-20977706)
chr4 (151-237)||(37435312-37435398)
chr4 (151-204)||(3499487-3499540)
chr4 (159-204)||(27188505-27188550)
chr4 (149-198)||(55380492-55380541)
chr4 (165-209)||(3486351-3486395)
chr4 (165-237)||(19620883-19620955)
chr4 (151-199)||(40846334-40846382)
chr4 (151-198)||(6641916-6641963)
chr4 (151-237)||(12601334-12601421)
chr4 (26-145)||(14904252-14904374)
chr4 (158-237)||(16632680-16632759)
chr4 (98-145)||(23123597-23123646)
chr4 (139-209)||(25650977-25651047)
chr4 (26-119)||(29121463-29121557)
chr4 (26-146)||(56532957-56533079)
chr4 (96-142)||(23750684-23750732)
chr4 (185-237)||(8105939-8105991)
chr4 (161-209)||(17700630-17700678)
chr4 (185-237)||(55732063-55732115)
chr4 (161-204)||(3395853-3395896)
chr4 (26-112)||(9141005-9141092)
chr4 (26-141)||(14833489-14833607)
chr4 (26-145)||(16632533-16632655)
chr4 (165-224)||(28066639-28066698)
chr4 (166-209)||(40860907-40860950)
chr4 (161-199)||(45833639-45833677)
chr4 (165-198)||(8182643-8182676)
chr4 (91-145)||(12811074-12811130)
chr4 (165-198)||(18077673-18077706)
chr4 (185-237)||(3395894-3395946)
chr4 (91-140)||(19620962-19621013)
chr4 (165-229)||(20648370-20648434)
chr4 (185-237)||(25650932-25650984)
chr4 (151-224)||(48371575-48371650)
chr4 (96-145)||(55380454-55380505)
[»] chr2 (80 HSPs)
chr2 (1-209)||(31967876-31968084)
chr2 (1-209)||(28550751-28550959)
chr2 (1-209)||(40332146-40332355)
chr2 (1-209)||(1586865-1587074)
chr2 (1-209)||(44840493-44840698)
chr2 (1-176)||(22785521-22785696)
chr2 (26-237)||(20151829-20152042)
chr2 (1-195)||(3277089-3277284)
chr2 (1-209)||(22776138-22776329)
chr2 (1-209)||(22781516-22781707)
chr2 (31-237)||(28711492-28711700)
chr2 (26-237)||(6573917-6574130)
chr2 (29-176)||(33074322-33074470)
chr2 (26-176)||(34321792-34321943)
chr2 (29-176)||(31327821-31327970)
chr2 (29-176)||(31334542-31334691)
chr2 (26-209)||(6392727-6392912)
chr2 (12-140)||(23392569-23392698)
chr2 (1-94)||(14581574-14581667)
chr2 (47-209)||(31800710-31800873)
chr2 (26-198)||(24377194-24377369)
chr2 (26-236)||(19540509-19540718)
chr2 (29-176)||(35743858-35744004)
chr2 (26-236)||(23235100-23235327)
chr2 (26-146)||(28701115-28701236)
chr2 (26-140)||(22802553-22802668)
chr2 (90-176)||(30557175-30557261)
chr2 (150-237)||(25829337-25829425)
chr2 (26-176)||(45087038-45087191)
chr2 (91-237)||(28140414-28140560)
chr2 (158-209)||(33074467-33074518)
chr2 (159-237)||(40782712-40782791)
chr2 (158-204)||(22317837-22317883)
chr2 (151-237)||(30667224-30667310)
chr2 (152-209)||(22802693-22802750)
chr2 (158-237)||(22260646-22260726)
chr2 (26-145)||(24576128-24576251)
chr2 (151-198)||(10009569-10009616)
chr2 (166-209)||(14581685-14581728)
chr2 (151-198)||(22187920-22187967)
chr2 (158-209)||(30557112-30557163)
chr2 (51-145)||(20568635-20568732)
chr2 (151-237)||(24850445-24850530)
chr2 (56-199)||(23595404-23595546)
chr2 (149-198)||(39037474-39037523)
chr2 (75-162)||(1084150-1084238)
chr2 (153-237)||(9015150-9015234)
chr2 (26-198)||(13963811-13963985)
chr2 (150-222)||(24576283-24576355)
chr2 (185-237)||(33074511-33074563)
chr2 (124-195)||(18376741-18376812)
chr2 (26-145)||(25829227-25829349)
chr2 (166-209)||(34321729-34321772)
chr2 (151-194)||(38781632-38781675)
chr2 (47-145)||(22260520-22260621)
chr2 (51-145)||(25037144-25037241)
chr2 (51-145)||(25041251-25041348)
chr2 (167-209)||(28701036-28701078)
chr2 (163-209)||(45086975-45087021)
chr2 (99-145)||(10009634-10009682)
chr2 (98-176)||(22317760-22317840)
chr2 (185-237)||(28700991-28701043)
chr2 (151-237)||(20568528-20568615)
chr2 (158-209)||(35743810-35743861)
chr2 (165-199)||(23184147-23184181)
chr2 (166-200)||(30621437-30621471)
chr2 (166-200)||(30624058-30624092)
chr2 (26-140)||(30667082-30667199)
chr2 (165-199)||(38631184-38631218)
chr2 (99-145)||(7609129-7609177)
chr2 (91-145)||(21537133-21537189)
chr2 (165-198)||(44881398-44881431)
chr2 (164-224)||(11388563-11388623)
chr2 (164-224)||(11394909-11394969)
chr2 (164-224)||(11405225-11405285)
chr2 (165-229)||(20070630-20070694)
chr2 (185-237)||(22317881-22317933)
chr2 (96-145)||(24850550-24850601)
chr2 (185-237)||(34321684-34321736)
chr2 (164-224)||(36251615-36251675)
[»] chr5 (59 HSPs)
chr5 (1-209)||(28464207-28464415)
chr5 (1-209)||(10848834-10849043)
chr5 (26-237)||(4887117-4887329)
chr5 (26-204)||(3245305-3245483)
chr5 (1-176)||(35986132-35986307)
chr5 (1-209)||(35931872-35932082)
chr5 (86-237)||(30115705-30115857)
chr5 (29-209)||(15517067-15517248)
chr5 (26-237)||(33022759-33022971)
chr5 (90-237)||(5430044-5430191)
chr5 (1-161)||(9089030-9089190)
chr5 (1-156)||(25930076-25930232)
chr5 (27-237)||(14086367-14086579)
chr5 (26-237)||(31117972-31118183)
chr5 (29-176)||(26759247-26759395)
chr5 (29-237)||(29138223-29138445)
chr5 (27-176)||(11993984-11994134)
chr5 (26-237)||(41566262-41566476)
chr5 (26-177)||(42243776-42243928)
chr5 (50-176)||(30743099-30743226)
chr5 (112-237)||(26784538-26784664)
chr5 (3-209)||(23391472-23391677)
chr5 (1-176)||(21660273-21660449)
chr5 (91-198)||(23412843-23412950)
chr5 (96-198)||(20551061-20551162)
chr5 (97-176)||(33933438-33933517)
chr5 (152-237)||(28139809-28139894)
chr5 (26-192)||(6512306-6512473)
chr5 (151-237)||(642523-642608)
chr5 (75-176)||(32160911-32161013)
chr5 (91-197)||(21072110-21072217)
chr5 (152-217)||(33933523-33933588)
chr5 (150-237)||(21910761-21910849)
chr5 (151-237)||(17815203-17815290)
chr5 (111-172)||(23478535-23478596)
chr5 (158-234)||(21099523-21099598)
chr5 (151-199)||(25096661-25096709)
chr5 (151-199)||(25154631-25154679)
chr5 (151-201)||(19536152-19536202)
chr5 (91-145)||(89342-89398)
chr5 (115-198)||(9398612-9398695)
chr5 (163-237)||(89267-89341)
chr5 (151-209)||(26759400-26759458)
chr5 (82-195)||(21198877-21198990)
chr5 (151-199)||(7745532-7745580)
chr5 (185-237)||(26759451-26759503)
chr5 (29-107)||(26765596-26765674)
chr5 (165-224)||(39362169-39362228)
chr5 (151-237)||(23881303-23881388)
chr5 (151-201)||(30743231-30743281)
chr5 (184-237)||(7745477-7745530)
chr5 (165-198)||(20797577-20797610)
chr5 (164-209)||(21660453-21660498)
chr5 (164-224)||(5301480-5301540)
chr5 (158-198)||(12352671-12352711)
chr5 (164-224)||(27203665-27203725)
chr5 (165-229)||(34771762-34771826)
chr5 (165-229)||(34782707-34782771)
chr5 (169-209)||(42243935-42243975)
[»] chr6 (70 HSPs)
chr6 (1-209)||(19065893-19066102)
chr6 (26-237)||(33351767-33351977)
chr6 (49-237)||(15954825-15955014)
chr6 (91-237)||(21235278-21235424)
chr6 (47-231)||(16264994-16265179)
chr6 (26-237)||(20730542-20730754)
chr6 (29-177)||(22076305-22076454)
chr6 (54-197)||(16877340-16877484)
chr6 (26-145)||(12349092-12349211)
chr6 (91-237)||(22802306-22802452)
chr6 (29-176)||(21618346-21618494)
chr6 (29-165)||(16336229-16336366)
chr6 (26-204)||(32544364-32544545)
chr6 (13-177)||(26589679-26589844)
chr6 (26-169)||(19832938-19833082)
chr6 (26-237)||(29918116-29918328)
chr6 (6-209)||(19086228-19086432)
chr6 (98-209)||(17608189-17608300)
chr6 (3-144)||(17316467-17316607)
chr6 (98-237)||(34451506-34451645)
chr6 (90-209)||(139234-139353)
chr6 (90-209)||(147255-147374)
chr6 (26-174)||(20487818-20487968)
chr6 (98-176)||(22386958-22387036)
chr6 (151-237)||(24117069-24117155)
chr6 (161-237)||(9718094-9718170)
chr6 (158-237)||(13435780-13435859)
chr6 (158-209)||(17381661-17381712)
chr6 (91-237)||(19624144-19624289)
chr6 (96-237)||(20112536-20112678)
chr6 (96-237)||(12715257-12715398)
chr6 (132-209)||(12423427-12423504)
chr6 (158-211)||(16336385-16336438)
chr6 (151-204)||(26972082-26972135)
chr6 (26-171)||(26972130-26972278)
chr6 (153-209)||(19832868-19832924)
chr6 (151-198)||(10640297-10640344)
chr6 (26-101)||(12423360-12423435)
chr6 (151-198)||(13602413-13602460)
chr6 (151-201)||(18435798-18435848)
chr6 (151-209)||(26589848-26589906)
chr6 (163-233)||(15302422-15302494)
chr6 (91-140)||(19688931-19688980)
chr6 (26-139)||(23284663-23284779)
chr6 (112-176)||(21128396-21128460)
chr6 (151-199)||(26943803-26943851)
chr6 (26-145)||(15302299-15302421)
chr6 (151-198)||(19470908-19470955)
chr6 (149-196)||(19688972-19689019)
chr6 (151-198)||(23284805-23284852)
chr6 (151-198)||(25597720-25597767)
chr6 (19-145)||(13602264-13602393)
chr6 (151-209)||(19482994-19483052)
chr6 (90-176)||(20635866-20635957)
chr6 (3-139)||(19482819-19482954)
chr6 (185-237)||(17381705-17381757)
chr6 (102-171)||(18435732-18435803)
chr6 (185-237)||(19832823-19832875)
chr6 (26-145)||(9717942-9718064)
chr6 (166-209)||(12349200-12349243)
chr6 (186-237)||(18435850-18435901)
chr6 (133-176)||(19482931-19482974)
chr6 (151-209)||(20635947-20636006)
chr6 (98-145)||(13435704-13435753)
chr6 (151-236)||(15531446-15531532)
chr6 (51-140)||(14100373-14100465)
chr6 (185-237)||(16336429-16336481)
chr6 (185-237)||(20487723-20487775)
chr6 (31-127)||(21625204-21625303)
chr6 (96-145)||(24116999-24117050)
[»] chr8 (81 HSPs)
chr8 (1-209)||(6407783-6407991)
chr8 (1-209)||(14989336-14989545)
chr8 (1-209)||(13430512-13430722)
chr8 (1-209)||(21288460-21288669)
chr8 (1-209)||(21301079-21301288)
chr8 (26-237)||(23185074-23185286)
chr8 (1-176)||(43639840-43640016)
chr8 (1-204)||(18151546-18151740)
chr8 (1-209)||(1745217-1745426)
chr8 (26-237)||(45538287-45538499)
chr8 (1-161)||(33560157-33560318)
chr8 (29-177)||(40845296-40845444)
chr8 (26-177)||(15335996-15336148)
chr8 (26-177)||(15425061-15425213)
chr8 (26-177)||(15516365-15516517)
chr8 (29-176)||(36105289-36105437)
chr8 (26-176)||(17797513-17797664)
chr8 (90-204)||(24832937-24833051)
chr8 (75-177)||(3598254-3598356)
chr8 (98-237)||(19156360-19156501)
chr8 (29-176)||(22663210-22663358)
chr8 (29-176)||(22673872-22674020)
chr8 (26-237)||(17441655-17441868)
chr8 (26-176)||(24551365-24551516)
chr8 (26-237)||(18120956-18121169)
chr8 (47-176)||(9320681-9320812)
chr8 (26-176)||(1237728-1237879)
chr8 (151-237)||(16681136-16681223)
chr8 (151-237)||(20382228-20382314)
chr8 (26-174)||(21932974-21933125)
chr8 (47-146)||(30421367-30421467)
chr8 (26-197)||(602606-602780)
chr8 (91-198)||(18321045-18321153)
chr8 (164-237)||(17797667-17797739)
chr8 (152-237)||(20255400-20255485)
chr8 (151-237)||(29693548-29693636)
chr8 (98-209)||(18679979-18680090)
chr8 (151-209)||(1237884-1237942)
chr8 (151-237)||(17914692-17914778)
chr8 (151-209)||(36105442-36105500)
chr8 (24-145)||(16189073-16189197)
chr8 (119-176)||(43774053-43774110)
chr8 (112-200)||(12757646-12757734)
chr8 (166-237)||(2811070-2811141)
chr8 (26-145)||(16207397-16207519)
chr8 (151-198)||(19707736-19707783)
chr8 (158-209)||(24551528-24551579)
chr8 (166-209)||(30421319-30421362)
chr8 (26-145)||(39693626-39693748)
chr8 (158-209)||(43640013-43640064)
chr8 (151-209)||(43774100-43774159)
chr8 (98-181)||(23271038-23271123)
chr8 (163-209)||(40845249-40845295)
chr8 (167-204)||(21933133-21933170)
chr8 (163-204)||(22663375-22663416)
chr8 (151-224)||(23263458-23263531)
chr8 (91-145)||(33083014-33083070)
chr8 (158-237)||(17267711-17267790)
chr8 (158-197)||(22674017-22674056)
chr8 (158-237)||(39693775-39693854)
chr8 (98-145)||(20382332-20382381)
chr8 (51-145)||(22745603-22745700)
chr8 (151-197)||(24646571-24646617)
chr8 (91-145)||(17267630-17267686)
chr8 (96-145)||(19943399-19943450)
chr8 (158-237)||(33083095-33083175)
chr8 (166-209)||(9320817-9320860)
chr8 (151-198)||(22745720-22745767)
chr8 (163-229)||(6318299-6318365)
chr8 (151-197)||(19943470-19943516)
chr8 (164-198)||(19956222-19956256)
chr8 (96-176)||(19461309-19461390)
chr8 (96-176)||(19558987-19559068)
chr8 (90-146)||(28903597-28903654)
chr8 (164-224)||(15780479-15780539)
chr8 (96-145)||(17525666-17525717)
chr8 (185-237)||(21933168-21933220)
chr8 (185-237)||(22674061-22674113)
chr8 (165-229)||(26111684-26111748)
chr8 (189-237)||(30421274-30421322)
chr8 (185-237)||(36105493-36105545)
[»] chr3 (81 HSPs)
chr3 (1-209)||(46796254-46796462)
chr3 (1-209)||(40851032-40851241)
chr3 (8-209)||(30054103-30054304)
chr3 (1-177)||(21605572-21605749)
chr3 (1-177)||(21636588-21636765)
chr3 (26-209)||(49666277-49666475)
chr3 (29-169)||(21640968-21641108)
chr3 (26-237)||(2561286-2561500)
chr3 (26-237)||(11223661-11223873)
chr3 (3-237)||(1727859-1728108)
chr3 (26-176)||(2785163-2785314)
chr3 (24-209)||(47207802-47207991)
chr3 (26-201)||(11869166-11869342)
chr3 (26-176)||(14955525-14955676)
chr3 (26-176)||(24775442-24775595)
chr3 (47-161)||(20627356-20627471)
chr3 (26-176)||(46349754-46349905)
chr3 (90-209)||(15833550-15833671)
chr3 (26-229)||(14969425-14969632)
chr3 (3-144)||(9699989-9700129)
chr3 (151-237)||(28582347-28582433)
chr3 (26-237)||(53056561-53056788)
chr3 (29-140)||(5213677-5213789)
chr3 (98-209)||(10529499-10529611)
chr3 (150-234)||(18142619-18142703)
chr3 (158-237)||(18121454-18121533)
chr3 (99-237)||(12962934-12963072)
chr3 (49-237)||(47405284-47405459)
chr3 (151-237)||(20646395-20646481)
chr3 (55-140)||(22140891-22140977)
chr3 (48-161)||(40799994-40800108)
chr3 (151-237)||(52920645-52920731)
chr3 (153-237)||(15903441-15903525)
chr3 (26-176)||(33583328-33583480)
chr3 (11-176)||(37412679-37412840)
chr3 (151-237)||(31303626-31303715)
chr3 (26-161)||(49642685-49642823)
chr3 (151-237)||(16199645-16199730)
chr3 (151-237)||(41495214-41495300)
chr3 (151-209)||(50300441-50300499)
chr3 (151-199)||(13824272-13824320)
chr3 (158-237)||(14392839-14392918)
chr3 (166-209)||(46349706-46349749)
chr3 (151-237)||(13948576-13948662)
chr3 (151-209)||(14955681-14955739)
chr3 (163-237)||(17238787-17238860)
chr3 (151-209)||(29855649-29855707)
chr3 (151-209)||(33583485-33583543)
chr3 (90-176)||(33598014-33598100)
chr3 (151-209)||(33598105-33598163)
chr3 (163-237)||(37467554-37467628)
chr3 (98-176)||(50300373-50300451)
chr3 (159-204)||(9699946-9699991)
chr3 (158-199)||(12388729-12388770)
chr3 (166-237)||(16658479-16658551)
chr3 (151-203)||(24775385-24775437)
chr3 (158-237)||(6090979-6091058)
chr3 (147-209)||(13977937-13978000)
chr3 (151-198)||(25398147-25398194)
chr3 (151-198)||(29951310-29951357)
chr3 (151-198)||(30000464-30000511)
chr3 (26-145)||(37467431-37467553)
chr3 (26-160)||(28582204-28582341)
chr3 (55-176)||(29855537-29855659)
chr3 (151-204)||(2785319-2785372)
chr3 (166-199)||(40800098-40800131)
chr3 (185-237)||(2785370-2785422)
chr3 (165-229)||(9380370-9380434)
chr3 (185-237)||(29855700-29855752)
chr3 (93-145)||(6090898-6090952)
chr3 (26-145)||(18121561-18121683)
chr3 (90-151)||(13954205-13954267)
chr3 (159-209)||(21641113-21641163)
chr3 (98-145)||(52920576-52920625)
chr3 (164-209)||(15851172-15851217)
chr3 (165-198)||(23636150-23636183)
chr3 (164-209)||(37412859-37412904)
chr3 (185-237)||(14955732-14955784)
chr3 (165-237)||(19249246-19249318)
chr3 (96-145)||(20646324-20646375)
chr3 (164-224)||(37886001-37886061)
[»] scaffold0247 (1 HSPs)
scaffold0247 (49-237)||(23363-23551)
[»] scaffold0473 (1 HSPs)
scaffold0473 (11-237)||(2511-2738)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-209)||(17603-17811)
[»] scaffold0217 (4 HSPs)
scaffold0217 (26-209)||(9659-9842)
scaffold0217 (33-176)||(21992-22136)
scaffold0217 (29-204)||(19133-19311)
scaffold0217 (151-237)||(21901-21987)
[»] chr1 (78 HSPs)
chr1 (1-204)||(21120875-21121080)
chr1 (1-176)||(46089053-46089229)
chr1 (1-237)||(21984660-21984898)
chr1 (1-204)||(21134971-21135176)
chr1 (1-169)||(10251050-10251218)
chr1 (1-208)||(42284692-42284899)
chr1 (26-176)||(21702912-21703062)
chr1 (1-173)||(21204765-21204939)
chr1 (29-201)||(44821351-44821524)
chr1 (26-237)||(35040264-35040476)
chr1 (1-209)||(37642312-37642522)
chr1 (26-209)||(2834788-2834971)
chr1 (26-161)||(30572295-30572430)
chr1 (26-237)||(32785706-32785919)
chr1 (26-204)||(39200795-39200974)
chr1 (1-176)||(48570063-48570247)
chr1 (3-209)||(19215678-19215881)
chr1 (47-176)||(2327270-2327400)
chr1 (26-176)||(25448395-25448548)
chr1 (24-172)||(22464643-22464793)
chr1 (98-209)||(21544184-21544296)
chr1 (26-236)||(22427113-22427339)
chr1 (26-161)||(29215895-29216031)
chr1 (3-209)||(23024854-23025042)
chr1 (91-198)||(28492211-28492320)
chr1 (47-237)||(2267208-2267382)
chr1 (132-237)||(21029000-21029104)
chr1 (69-145)||(7744952-7745028)
chr1 (12-144)||(34255389-34255521)
chr1 (151-209)||(25448332-25448390)
chr1 (115-237)||(26701898-26702019)
chr1 (121-237)||(12284651-12284765)
chr1 (164-237)||(21204685-21204758)
chr1 (135-237)||(16235065-16235168)
chr1 (91-237)||(7309982-7310130)
chr1 (96-197)||(10757591-10757692)
chr1 (153-198)||(12613588-12613633)
chr1 (151-199)||(2268767-2268815)
chr1 (112-176)||(19170181-19170245)
chr1 (158-237)||(46089226-46089306)
chr1 (158-209)||(2327207-2327258)
chr1 (158-237)||(21191634-21191712)
chr1 (151-212)||(38282806-38282867)
chr1 (185-237)||(29216057-29216109)
chr1 (151-198)||(19717762-19717809)
chr1 (26-145)||(20954333-20954455)
chr1 (151-237)||(22599935-22600022)
chr1 (26-145)||(22600042-22600164)
chr1 (167-237)||(30572421-30572492)
chr1 (151-237)||(33256106-33256193)
chr1 (30-145)||(33256211-33256329)
chr1 (151-237)||(33276278-33276365)
chr1 (30-145)||(33276383-33276501)
chr1 (151-198)||(35402047-35402094)
chr1 (26-145)||(38282664-38282786)
chr1 (158-209)||(48570015-48570066)
chr1 (98-145)||(22154028-22154077)
chr1 (166-204)||(29216021-29216059)
chr1 (163-229)||(30893314-30893380)
chr1 (151-209)||(34255311-34255369)
chr1 (26-130)||(1900443-1900550)
chr1 (185-237)||(1900607-1900659)
chr1 (151-199)||(20954265-20954313)
chr1 (185-237)||(25448287-25448339)
chr1 (150-198)||(48704456-48704504)
chr1 (151-198)||(17024774-17024821)
chr1 (90-176)||(17371188-17371275)
chr1 (151-198)||(23036322-23036369)
chr1 (91-145)||(12284587-12284643)
chr1 (164-209)||(19170131-19170176)
chr1 (91-145)||(48704368-48704424)
chr1 (185-237)||(2327162-2327214)
chr1 (164-224)||(4178266-4178326)
chr1 (185-237)||(10251266-10251318)
chr1 (151-199)||(22154097-22154145)
chr1 (165-229)||(35013291-35013355)
chr1 (185-237)||(38282857-38282909)
chr1 (185-237)||(48569970-48570022)
[»] scaffold0011 (2 HSPs)
scaffold0011 (26-209)||(65257-65440)
scaffold0011 (26-177)||(144334-144485)
[»] scaffold0003 (1 HSPs)
scaffold0003 (93-237)||(89855-89999)
[»] scaffold0527 (2 HSPs)
scaffold0527 (26-209)||(8031-8214)
scaffold0527 (59-209)||(1-151)
[»] scaffold0005 (3 HSPs)
scaffold0005 (69-209)||(246075-246215)
scaffold0005 (151-237)||(212594-212680)
scaffold0005 (26-141)||(6092-6210)
[»] scaffold0015 (1 HSPs)
scaffold0015 (29-209)||(60905-61086)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-204)||(663-867)
[»] scaffold0176 (1 HSPs)
scaffold0176 (29-204)||(9257-9432)
[»] scaffold0414 (1 HSPs)
scaffold0414 (29-174)||(7019-7165)
[»] scaffold0043 (1 HSPs)
scaffold0043 (26-209)||(78194-78378)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-161)||(5209-5370)
[»] scaffold0471 (3 HSPs)
scaffold0471 (29-176)||(3406-3554)
scaffold0471 (151-209)||(3559-3617)
scaffold0471 (185-237)||(3610-3662)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-176)||(7446-7622)
[»] scaffold0439 (2 HSPs)
scaffold0439 (26-176)||(6601-6752)
scaffold0439 (158-209)||(6538-6589)
[»] scaffold0251 (1 HSPs)
scaffold0251 (98-236)||(7875-8015)
[»] scaffold0151 (2 HSPs)
scaffold0151 (13-176)||(11447-11611)
scaffold0151 (151-209)||(11616-11674)
[»] scaffold0012 (2 HSPs)
scaffold0012 (26-176)||(215358-215509)
scaffold0012 (158-209)||(215310-215361)
[»] scaffold0207 (2 HSPs)
scaffold0207 (12-174)||(20697-20859)
scaffold0207 (12-174)||(10796-10958)
[»] scaffold0028 (2 HSPs)
scaffold0028 (26-177)||(5459-5614)
scaffold0028 (165-229)||(15006-15070)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-140)||(87506-87646)
scaffold0045 (158-209)||(87424-87475)
[»] scaffold0035 (5 HSPs)
scaffold0035 (29-176)||(99069-99216)
scaffold0035 (151-237)||(19259-19344)
scaffold0035 (158-209)||(99006-99057)
scaffold0035 (91-145)||(19362-19418)
scaffold0035 (185-237)||(98961-99013)
[»] scaffold0016 (1 HSPs)
scaffold0016 (3-209)||(791-996)
[»] scaffold0004 (5 HSPs)
scaffold0004 (29-140)||(211500-211612)
scaffold0004 (151-229)||(220478-220555)
scaffold0004 (151-197)||(377383-377429)
scaffold0004 (163-209)||(211648-211694)
scaffold0004 (158-198)||(244076-244116)
[»] scaffold0084 (3 HSPs)
scaffold0084 (26-237)||(32584-32799)
scaffold0084 (98-199)||(49504-49606)
scaffold0084 (75-174)||(207-307)
[»] scaffold0227 (1 HSPs)
scaffold0227 (26-172)||(22775-22924)
[»] scaffold0171 (1 HSPs)
scaffold0171 (91-237)||(27229-27375)
[»] scaffold0177 (1 HSPs)
scaffold0177 (98-209)||(20220-20332)
[»] scaffold1331 (2 HSPs)
scaffold1331 (133-204)||(444-515)
scaffold1331 (26-138)||(1598-1711)
[»] scaffold0422 (1 HSPs)
scaffold0422 (98-209)||(11917-12028)
[»] scaffold0050 (1 HSPs)
scaffold0050 (111-209)||(35402-35500)
[»] scaffold0022 (3 HSPs)
scaffold0022 (98-237)||(39597-39738)
scaffold0022 (98-237)||(137657-137798)
scaffold0022 (151-197)||(159310-159356)
[»] scaffold0479 (1 HSPs)
scaffold0479 (98-198)||(10141-10241)
[»] scaffold1434 (1 HSPs)
scaffold1434 (151-237)||(571-658)
[»] scaffold0065 (1 HSPs)
scaffold0065 (150-237)||(1943-2030)
[»] scaffold0359 (2 HSPs)
scaffold0359 (151-229)||(5484-5562)
scaffold0359 (91-145)||(5580-5636)
[»] scaffold0290 (2 HSPs)
scaffold0290 (151-237)||(18405-18491)
scaffold0290 (26-145)||(18511-18633)
[»] scaffold0120 (2 HSPs)
scaffold0120 (151-237)||(36560-36645)
scaffold0120 (151-237)||(42360-42445)
[»] scaffold0007 (2 HSPs)
scaffold0007 (112-200)||(143276-143364)
scaffold0007 (185-237)||(143365-143417)
[»] scaffold0570 (1 HSPs)
scaffold0570 (98-176)||(1538-1617)
[»] scaffold0364 (1 HSPs)
scaffold0364 (115-237)||(6197-6316)
[»] scaffold0337 (1 HSPs)
scaffold0337 (150-237)||(14901-14988)
[»] scaffold0275 (2 HSPs)
scaffold0275 (158-209)||(8515-8566)
scaffold0275 (185-237)||(8559-8611)
[»] scaffold0026 (5 HSPs)
scaffold0026 (151-237)||(60255-60342)
scaffold0026 (163-236)||(8148-8222)
scaffold0026 (151-197)||(151714-151760)
scaffold0026 (151-209)||(115760-115818)
scaffold0026 (26-142)||(8025-8144)
[»] scaffold0861 (1 HSPs)
scaffold0861 (151-229)||(4739-4817)
[»] scaffold0334 (1 HSPs)
scaffold0334 (151-237)||(10034-10120)
[»] scaffold0261 (2 HSPs)
scaffold0261 (96-198)||(5776-5880)
scaffold0261 (165-229)||(9189-9253)
[»] scaffold0161 (1 HSPs)
scaffold0161 (26-146)||(9996-10120)
[»] scaffold0426 (1 HSPs)
scaffold0426 (151-237)||(13851-13938)
[»] scaffold0210 (2 HSPs)
scaffold0210 (26-145)||(1759-1881)
scaffold0210 (149-237)||(1868-1957)
[»] scaffold0771 (2 HSPs)
scaffold0771 (151-237)||(716-802)
scaffold0771 (90-151)||(6293-6355)
[»] scaffold0146 (1 HSPs)
scaffold0146 (163-237)||(15339-15412)
[»] scaffold0116 (2 HSPs)
scaffold0116 (151-229)||(20763-20841)
scaffold0116 (91-161)||(20845-20917)
[»] scaffold0066 (1 HSPs)
scaffold0066 (112-197)||(60708-60792)
[»] scaffold0025 (1 HSPs)
scaffold0025 (158-199)||(74828-74869)
[»] scaffold0193 (1 HSPs)
scaffold0193 (96-199)||(15965-16067)
[»] scaffold0485 (2 HSPs)
scaffold0485 (152-199)||(9215-9262)
scaffold0485 (112-145)||(9296-9329)
[»] scaffold0083 (2 HSPs)
scaffold0083 (26-145)||(25865-25987)
scaffold0083 (158-198)||(25798-25838)
[»] scaffold0064 (1 HSPs)
scaffold0064 (151-198)||(43728-43775)
[»] scaffold0023 (1 HSPs)
scaffold0023 (24-143)||(103669-103791)
[»] scaffold0452 (1 HSPs)
scaffold0452 (185-237)||(1652-1704)
[»] scaffold0411 (1 HSPs)
scaffold0411 (151-199)||(12450-12498)
[»] scaffold0655 (1 HSPs)
scaffold0655 (165-224)||(8655-8714)
[»] scaffold0047 (2 HSPs)
scaffold0047 (26-141)||(30323-30441)
scaffold0047 (57-187)||(10033-10162)
[»] scaffold0001 (1 HSPs)
scaffold0001 (165-224)||(407984-408043)
[»] scaffold0280 (1 HSPs)
scaffold0280 (29-67)||(2702-2740)
[»] scaffold0132 (1 HSPs)
scaffold0132 (105-174)||(37947-38016)
[»] scaffold0243 (1 HSPs)
scaffold0243 (158-198)||(4816-4856)


Alignment Details
Target: scaffold1359 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 1801 - 1565
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1801 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggcgagtttgaatccttgaaacaactttt 1702  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  |||||||| |  ||||||||||||||||||||||| |||||||| |||||||||    
T  1701 gaagctttaagttgcatctcctgatgaactgtagcttctggtgaaacacagcttttggtgaacttgcttctgatgacgtcatcacttcagaagcactttg 1602  T
Q  201 tctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||  | | || |||||||||||| |||||||||||    
T  1601 tcttctgtagcagttttcttcagacactttaagcttc 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 667 - 472
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   ||||||||||||||||||||| || ||  |||||||||||| | ||||| ||| |||||||||||||||||||||||||    
T  667 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccatcaaacagcttctgaagctttaagttgcatctcctga 568  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||| ||||||                 ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  567 tgaactgcaccttctg-----------------atgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcaga 485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 14425508 - 14425744
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14425508 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttntccagtcttctgcaatgttaggcgagtttgaatccttgaaacaactttt 14425607  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    ||||||||||||||||||||||||||||||  ||||||||||||  |||| ||| |  ||||||||||||||||||||||| |||||||| |||||||||    
T  14425608 gaagctttaagttgcatctcctgatgaactntagcttctggtgaaacacancttttgntgaacttgcttctgatgacgtcatcacttcagaagcactttg 14425707  T
Q  201 tctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||  | | || |||||||||||| |||||||||||    
T  14425708 tcttcngtagcagttttcttcagacactttaagcttc 14425744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 27871780 - 27872018
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | ||||||| ||||||||||||||||||||||    
T  27871780 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatactattccagacttctgcaatttctaggtgaatttgaatccttgaaacaacttt 27871879  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt- 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||     
T  27871880 tgaagctttaagttgcatttcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgacgtcattacttcaggagcacttc 27871979  T
Q  199 tgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
       ||| |||| || ||||||||||||||||||||||||    
T  27871980 acacttcaggagcagttttcttcagacgctttaagcttc 27872018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 21381525 - 21381288
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||| || ||||||||||||||||    
T  21381525 ctttgaagaataggcatccaatgcatttcaaaatagccgttgccacacttttccagtcttctgcaatctttaggcgagttagagtccttgaaacaacttt 21381426  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||| || ||||||  |||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||||| ||||||||    
T  21381425 tgaaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaactagcttctgatgacgtcatcacttcagaagcacttt 21381326  T
Q  200 gtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    | |||||||| || ||||||||||||||||||||||||    
T  21381325 gactttaggagcacttttcttcagacgctttaagcttc 21381288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 32264814 - 32264610
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| ||||||    
T  32264814 ctttgaagaataaacatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttctaggcgagtttgaatccttgaaataacttt 32264715  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||| | |||| ||| ||||||||||||||| |||||||||||||||||    
T  32264714 tgaagctttaagtcgcatctcctgatgaactgcagcttctggtgatacacaacttttgatgatctttcttctgatgacgtcatcacttcaggagcacttt 32264615  T
Q  200 gtctt 204  Q
    |||||    
T  32264614 gtctt 32264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 19339347 - 19339138
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||| ||||| || |||||||||||  |||    
T  19339347 ctttgaagaataagcatccaatgcatttcaaaatagtcgttgccacacttttccagtcttctgcaatctttaggcgagttagagtccttgaaacaggttt 19339248  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||| |||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||| ||||||||    
T  19339247 tgaaactttaagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgaggacgtcatcacttcagaagcacttt 19339148  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  19339147 gtcttcagga 19339138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 48062917 - 48062741
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||  |||| | |||| |||||||||| ||||||||||||||    
T  48062917 ctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatacttttccagtcttcgacaatttctaggcgagtttgaattcttgaaacaacttt 48062818  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  48062817 tgaagctttaagttgcatctcttgatgaactgcagcttctggtgatacacagcttctgatggacttgcttctgatga 48062741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 229
Target Start/End: Complemental strand, 16543085 - 16542879
Alignment:
Q  24 catttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcct 122  Q
    ||||||||||||| ||||||   |||||||||||||||||||||  |||   |||||||||||| | ||||| |||||||||| ||| ||||||||||||    
T  16543085 catttcaaaatagtcgttgcttcacttttccagtcttctgcaatcattaaacgagtttgaatccattaaacagcttttgaagcattatgttgcatctcct 16542986  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    ||||||||||||||| ||||||||  ||| |||| |||||||| ||||||||||||||||||||||| |||||||||||||| || | || |||||||||    
T  16542985 gatgaactgcagcttatggtgattttcagtttctgatgaactttcttctgatgacgtcaccacttcaagagcactttgtcttcagaagcagttttcttca 16542886  T
Q  223 gacgctt 229  Q
    |||||||    
T  16542885 gacgctt 16542879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 16622577 - 16622783
Alignment:
Q  24 catttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcct 122  Q
    ||||||||||||| ||||||   |||||||||||||||||||||  |||   |||||||||||| | ||||| |||||||||| ||| ||||||||||||    
T  16622577 catttcaaaatagtcgttgcttcacttttccagtcttctgcaatcattaaacgagtttgaatccattaaacagcttttgaagcattatgttgcatctcct 16622676  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    ||||||||||||||| ||||||||  ||| |||| |||||||| ||||||||||||||||||||||| |||||||||||||| || | || |||||||||    
T  16622677 gatgaactgcagcttatggtgattttcagtttctgatgaactttcttctgatgacgtcaccacttcaagagcactttgtcttcagaagcagttttcttca 16622776  T
Q  223 gacgctt 229  Q
    |||||||    
T  16622777 gacgctt 16622783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 204
Target Start/End: Complemental strand, 48236937 - 48236786
Alignment:
Q  54 cagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagc 152  Q
    ||||||| ||||||| ||||  ||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  48236937 cagtcttatgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattttcagc 48236838  T
Q  153 ttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  48236837 ttctgatgaacttgcttctgatgacgtcaccacttcaggagtactttgtctt 48236786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 8183025 - 8183223
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    |||||||||||  ||||| ||||||||||||||||||||||| ||||  ||||||||| | || | ||||||||| ||||||| ||||||||||||||||    
T  8183025 tttcaaaatagttgttgctatacttttccagtcttctgcaatcttagacgagtttgaaacttttatacaactttttaagctttgagttgcatctcctgat 8183124  T
Q  126 gaactgcagcttctggtgattcaca---------------gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||||               ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8183125 gaactgcagcttctggtgattcacagcttttgatgaacttgcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactttgtctttagga 8183223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 28622419 - 28622201
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||||||||||   ||||||| ||| |||||||||| ||||  ||| |||||||| |  ||||||||||||||||||||||||||||||||||    
T  28622419 tttcaaattagccgttgcttcacttttctagtattctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagttgcatctcctga 28622320  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcacca------cttcaggagcactttgtctttaggaacaattttc 218  Q
    ||||||||||||||||||||||   ||||| | |||||||||||||||||||||||||||      |||||||||||||||||||| | || || | |||    
T  28622319 tgaactgcagcttctggtgatttttagcttatgatgaacttgcttctgatgacgtcaccactttgtcttcaggagcactttgtcttcatgagcagtattc 28622220  T
Q  219 ttcagacgctttaagcttc 237  Q
    |||| ||||||||||||||    
T  28622219 ttcatacgctttaagcttc 28622201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 14426642 - 14426837
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   ||||||||||||||||||||| || || ||||||||||||| | ||||| ||| |||||||||||||||||||||||||    
T  14426642 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccattaaacagcttctgaagctttaagttgcatctcctga 14426741  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||| ||||||                 ||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  14426742 tgaactgcaccttctg-----------------atgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcaga 14426824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 33691775 - 33691561
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||| | |||||||||||| ||  ||||||||||    
T  33691775 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccatttaacagcctttgaagctttatgtcttgcatctcct 33691676  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    ||||||||  ||||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || || ||||||    
T  33691675 gatgaactagagcttctggtgattttcaacttctaatgaacttgcttctgataacgtcaccacttcaggagcactttgtcttcaggagcagttctcttca 33691576  T
Q  223 gacgctttaagcttc 237  Q
    |||||||||| ||||    
T  33691575 gacgctttaaacttc 33691561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 4412049 - 4411883
Alignment:
Q  11 taagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttttgaagcttta 109  Q
    |||||||||||||| ||||||  ||||||||| ||||||| |||||||||||||||| | |||| ||||| || ||||||||||| |||||||| |||||    
T  4412049 taagcatccaatgcttttcaagttagccgttgtcatacttctccagtcttctgcaatttctaggcgagttagagtccttgaaacagcttttgaaacttta 4411950  T
Q  110 agttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||  |||||| |||||||||||||||||||||||  ||||||||| ||||| |||||||| ||||    
T  4411949 agttcaatctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttctaatga 4411883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 24794811 - 24794681
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||| || ||||||||||||||||    
T  24794811 ctttgaggaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttt 24794712  T
Q  100 tgaagctttaagttgcatctcctgatgaact 130  Q
    |||| |||| |||| ||  ||||||||||||    
T  24794711 tgaaactttgagttccaattcctgatgaact 24794681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 79 - 207
Target Start/End: Complemental strand, 16111893 - 16111765
Alignment:
Q  79 ttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacg 178  Q
    |||||||| | |||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||   | |||||||| ||||||||||||||||||    
T  16111893 ttgaatccataaaacaacttttgaagctttaagttgcatcctctgatcaactgcagcttctggtgatttttatcttctaataaacttgcttctgatgacg 16111794  T
Q  179 tcaccacttcaggagcactttgtctttag 207  Q
    ||| ||||||| |||||||||||||||||    
T  16111793 tcatcacttcacgagcactttgtctttag 16111765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 96 - 204
Target Start/End: Original strand, 33605852 - 33605960
Alignment:
Q  96 cttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||| ||||| | | |||||||||||||||||||| |||||||    
T  33605852 cttttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaattcgattctgatgacgtcaccactttaggagca 33605951  T
Q  196 ctttgtctt 204  Q
    |||||||||    
T  33605952 ctttgtctt 33605960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 48805976 - 48805800
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||  |||||||||||||||||||| |||||||||||||| |  ||||||||| || ||| | |||| ||||| || ||||||||||| ||||    
T  48805976 ctttgaagaaatagcatccaatgcatttcaaactagccgttgccatattcctccagtcttatgtaatttctaggcgagttagagtccttgaaacagcttt 48805877  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||   || |||| |||||| |||||||||||||||||||||||| || ||||||| |||||||| ||||||||||    
T  48805876 tgaaaacttgagttccatctcttgatgaactgcagcttctggtgatacatagcttctgatgaactttcttctgatga 48805800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 209
Target Start/End: Complemental strand, 7339887 - 7339763
Alignment:
Q  75 gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
    |||||| ||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||||||||||    
T  7339887 gagtttaaatccattaaacaatttttgaagctttaagttgcatctcctgatgaactgcagcttctgg----------cttctgatgaacttgcttctgat 7339798  T
Q  175 gacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||||||||| ||||    
T  7339797 gacgtcaccacttcaggagcactttgtcttcagga 7339763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 4429162 - 4428999
Alignment:
Q  16 atccaatgcatttcaaaatagccgttgccata--cttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagt 112  Q
    ||||||||| ||||||  ||||||||||||||  ||| ||| |||||||||||| || ||| ||||| || ||||||||||| |||||||| ||||||||    
T  4429162 atccaatgcttttcaagttagccgttgccatatacttctcctgtcttctgcaatttttaggcgagttagagtccttgaaacagcttttgaaactttaagt 4429063  T
Q  113 tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |  |||||| |||||||||||||||||||||||  ||||||||| ||||| |||||||||||||    
T  4429062 tcaatctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttctgatga 4428999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 30945353 - 30945224
Alignment:
Q  91 aacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcag 190  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||||||    
T  30945353 aacaacctttgaagctttaagttgcatctcctgatgaactgcagcttctg-----------------atgaacttgcttctgatgacgtcaccacttcag 30945271  T
Q  191 gagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||| |||| || ||||||||||||| ||||||||||    
T  30945270 gagcactttgtcttcaggagcagttttcttcagacgttttaagcttc 30945224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 2265579 - 2265446
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    ||||||||||||||| |||||||| |||||||||||||| || ||  |||||||||||  | ||||| ||||| ||||||||||||||||||||||||||    
T  2265579 caaaatagccgttgctatactttttcagtcttctgcaatctttagacgagtttgaatctgttaaacagcttttaaagctttaagttgcatctcctgatga 2265480  T
Q  128 actgcagcttctggtgattcacagcttctaatga 161  Q
    ||| || ||||||||||||| |||||||| ||||    
T  2265479 actacaacttctggtgattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 4821568 - 4821720
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||||||||||   ||||||| ||||||||| ||| || ||  ||||||||||   | ||||| ||||||||||||||||||| |||||| ||    
T  4821568 tttcaaaatagccgttgctccacttttctagtcttctgtaatctttagacgagtttgaatttgttaaacagcttttgaagctttaagttgtatctccgga 4821667  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    ||||||||||||||||||||||  |||||||| | ||||||||||||||||||    
T  4821668 tgaactgcagcttctggtgattttcagcttctgacgaacttgcttctgatgac 4821720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 9709865 - 9709668
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  ||||   |||||||||||| ||||||||||||||    
T  9709865 tttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagctttatgttgcatctcctga 9709766  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||||||||  ||||||||               ||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  9709765 tgaactgcagcttctggtgattttcagcttct---------------gatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcaga 9709681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 2500133 - 2500348
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||  |||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  2500133 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcct 2500232  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttc 221  Q
    ||  |||   ||||||||||||| | |||||||| |||||||||||| ||||||||||| ||||||| |||||| |||||||| |||| || || |||||    
T  2500233 gaaaaacaagagcttctggtgatcctcagcttctgatgaacttgcttatgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttc 2500332  T
Q  222 agacgctttaagcttc 237  Q
    ||| |||| |||||||    
T  2500333 agatgcttcaagcttc 2500348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 197
Target Start/End: Original strand, 44467159 - 44467334
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaac-ttttgaagctttaagt--tgcatctcc 121  Q
    ||||||||||| ||||||   ||| ||| |||||||||||||| ||||  ||| || ||||| |  |||||| ||||||||||||||||  |||||||||    
T  44467159 tttcaaaatagtcgttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcc 44467258  T
Q  122 tgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    ||||||||| |||||| |||||||   |||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  44467259 tgatgaacttcagcttttggtgatcttcagcttctgatgaacttgcttctgatggcgtcatcacttcaggagcact 44467334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 21695562 - 21695671
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    ||||||||||||||||||||||  |||||||| ||||||||| ||||||||||||||   |||||||| |||||||||||| ||||||||||| ||||||    
T  21695562 aacaacttttgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatcttcagcttctgatgaacttgcttatgatgacgtcatcacttc 21695661  T
Q  189 aggagcactt 198  Q
    | ||||||||    
T  21695662 aagagcactt 21695671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 237
Target Start/End: Original strand, 30026073 - 30026214
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    |||||||||||||||  |||||||| |||||||||  |||||||||||||   |||||||| |||||||||||||||||||||||| |||||||||||||    
T  30026073 tttgaagctttaagtcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 30026172  T
Q  196 ctttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||  ||| || | || || |||||||| |||| |||||||    
T  30026173 cttttacttcagaagcacttctcttcagatgcttcaagcttc 30026214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1293091 - 1293184
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaaca 94  Q
    |||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||| |||||| ||||  ||||||||||||||||||||    
T  1293091 ctttgaagaataagcatccaatgcctttcaaaatagttgttgctatacttttccagtcttttgcaattttagtcgagtttgaatccttgaaaca 1293184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 209
Target Start/End: Original strand, 331744 - 331927
Alignment:
Q  30 aaaatagccgttgccatacttttccagtcttctgcaatgttaggt-gagtttgaatccttgaaacaacttttgaagctttaagtt-gcatctcctgatga 127  Q
    |||||||| |||||   ||| |||||||||||||||||| | ||  ||  |||||||| | ||||||| |||||||||||||||  |||||||||||||     
T  331744 aaaatagctgttgcttcactcttccagtcttctgcaatgcttggacgaccttgaatccataaaacaacctttgaagctttaagtccgcatctcctgatgg 331843  T
Q  128 actgcagcttctggtgattcacagcttctaatgaactt--gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||| ||||||||||||||   |||||||| ||||||||  |||||||||||||||| ||||| ||||||| |||||||| ||||    
T  331844 acttcagcttctggtgatcttcagcttctgatgaacttttgcttctgatgacgtcatcactttaggagcagtttgtcttcagga 331927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 2913671 - 2913456
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||||||| ||||||||||| |||| || |||| || ||| | |  |||| | ||||||| |||||||  ||||||||||    
T  2913671 tttcaaaatagtcgttgctccacttttctagtcttctgcattgtttagatgagattaaattcattgaacagcctttgaagatttaagtcttgcatctcct 2913572  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttc 221  Q
    |||||||| ||| ||||||||||   || ||||| |||||||||||| |||||||||||  ||||||||||||| |||||||| |||| || || |||||    
T  2913571 gatgaactacagtttctggtgatcttcatcttctgatgaacttgcttttgatgacgtcattacttcaggagcacttttgtcttcaggagcacttctcttc 2913472  T
Q  222 agacgctttaagcttc 237  Q
    | | ||||||||||||    
T  2913471 atatgctttaagcttc 2913456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 30944386 - 30944191
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||   ||||||||| |||||||||||  ||||  ||| || ||||| |  |||||| |||||||||||||||||||||||||||    
T  30944386 tttcaaaatagttgttgcttcacttttccaatcttctgcaatacttagacgagattaaatccgttgaacaacctttgaagctttaagttgcatctcctga 30944287  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||                 |||||| ||||||||||| | |||||||||||||||||||||||||| |||| || ||||||||| |    
T  30944286 tgaactgcagcttctg-----------------atgaacgtgcttctgatggcttcaccacttcaggagcactttgtcttcaggagcagttttcttcaaa 30944204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 15704559 - 15704445
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||  |||||||||||| | ||||| |||||||||||||||||| ||||| |||||||    
T  15704559 caaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagtttcatcttctgatga 15704460  T
Q  128 actgcagcttctggt 142  Q
    ||| || ||||||||    
T  15704459 actacaacttctggt 15704445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 12174403 - 12174252
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatcct-tgaaacaacttttgaagctttaagttgcatctcctg 123  Q
    ||||||||||| ||||||   |||||||||||||||||||||  ||||  ||| ||||||||  | ||||| |||||||||||| ||||||||||  |||    
T  12174403 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagctt-aagttgcatcctctg 12174305  T
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||||||||||||||||||   ||||||| || ||||||||||||||||    
T  12174304 atgaactgcagcttctggtgatttttagcttctgataaacttgcttctgatga 12174252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 15088615 - 15088790
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| || ||||||||||||||| ||||  ||| || ||||| |  |||| | |||||||||||| ||  ||||||||||    
T  15088615 tttcaaaatagtcgttgcttcactctttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttacgtcttgcatctcct 15088714  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |  |||||||||||||   |||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  15088715 gatgaattagagcttctggtgatcttcagcttatgatgaacttgcttctgatgacgtcatcacttcaggagcactt 15088790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 5826170 - 5826243
Alignment:
Q  136 ttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||| ||||    
T  5826170 ttctggtgattcacagcttctgatgaacttgcttctgatgacttcattacttcaggagcactttgtcttcagga 5826243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 35952751 - 35952599
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatcct-tgaaacaacttttgaagctttaagttgcatctcctg 123  Q
    ||||||||||| ||||||   |||||||||||||||| ||||  ||||  ||| ||||||||  | ||||| |||||||||| ||||||||||||  |||    
T  35952751 tttcaaaatagtcgttgcttcacttttccagtcttcttcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctg 35952652  T
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||||| ||||||||||||   ||||||| || ||||||||||||||||    
T  35952651 atgaactgcaacttctggtgatttttagcttctgataaacttgcttctgatga 35952599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 11319642 - 11319728
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||| | ||||||||| |||||||||||||||||| ||| |||| || || |||||||||||||||||||||    
T  11319642 gcttctgatgaacttgcttttaatgacgtcatcacttcaggagcactttggcttcaggagcacttctcttcagacgctttaagcttc 11319728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 13880341 - 13880427
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||| ||| || | || || |||||||||||||||||||||    
T  13880341 gcttctgatgaacttgcttctgatgatgtcatcacttcaggagcactttgacttcagaagcacttctcttcagacgctttaagcttc 13880427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 9069657 - 9069808
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagtt--gcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||  || ||||| |  |||||| ||||||||||||||||  |||||||||    
T  9069657 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgatattaaatcccttgaacaacctttgaagctttaagttttgcatctcct 9069756  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
    |||||| |  ||||||||||||||  |||||||| ||||||||| |||||||    
T  9069757 gatgaaatagagcttctggtgattttcagcttctgatgaacttgtttctgat 9069808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 199
Target Start/End: Complemental strand, 39284536 - 39284452
Alignment:
Q  115 catctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||| ||||||| || ||||||||||||||   |||||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  39284536 catcttctgatgatcttcagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtcatcacttcaggagtacttt 39284452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 13692577 - 13692664
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||| |||||||| |||| || || ||||||||||| |||||||||    
T  13692577 gcttctgatgaacttgcttctgatgatgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttc 13692664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 10883236 - 10883008
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| ||||||||||||| |||| ||||  ||| || ||||| |  |||||| |||||| ||||||||  ||||||||||    
T  10883236 tttcaaaatagtcgttgcttcactcttccagtcttctgaaatgattagacgagattaaatccattgaacaacctttgaaactttaagtcttgcatctcct 10883137  T
Q  123 gatgaactgcagcttctggtgattcaca--------------gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagg 208  Q
    |||||||| ||||||||||||||   ||              |||||| |||||||||||||||| ||||||  |||||||||||||||||| ||| ||     
T  10883136 gatgaactacagcttctggtgatcttcagcttctgatgggatgcttctgatgaacttgcttctgacgacgtcgtcacttcaggagcactttgacttcagt 10883037  T
Q  209 aacaattttcttcagacgctttaagcttc 237  Q
    | || || |||||||||||||||||||||    
T  10883036 agcacttctcttcagacgctttaagcttc 10883008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 1293182 - 1293243
Alignment:
Q  148 acagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  1293182 acagcttctgatgaacttgcttctgataacgtcatcacttcaggagcactttgtcttcagga 1293243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 14193318 - 14193398
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||| |||| |  || ||||||||||||| |||||||    
T  14193318 atgaacttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcgcttctcttcagacgcttcaagcttc 14193398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 15468160 - 15468228
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacg 226  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| | || || |||||||||||||    
T  15468160 atgaacttgcttctgatgacgtcatcacttcaagagcactttgtcttcaagagcagttttcttcagacg 15468228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 9069810 - 9069858
Alignment:
Q  161 aacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  9069810 aacttgcttctgatgacgtcaccacttcagaagcactttgtcttcagga 9069858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 13648934 - 13649022
Alignment:
Q  150 agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||  ||| ||||||||||||||||||| |||||||||||||| |||||||| |||| || || ||||||||||| |||| ||||    
T  13648934 agcttctgttgatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaaacttc 13649022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Complemental strand, 16556669 - 16556609
Alignment:
Q  135 cttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    ||||||||||||  |||||||  ||| ||||||||||||||||||||||||||||||||||    
T  16556669 cttctggtgattttcagcttcggatgtacttgcttctgatgacgtcaccacttcaggagca 16556609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 16608993 - 16609053
Alignment:
Q  135 cttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    ||||||||||||  |||||||  ||| ||||||||||||||||||||||||||||||||||    
T  16608993 cttctggtgattttcagcttcggatgtacttgcttctgatgacgtcaccacttcaggagca 16609053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 28409275 - 28409323
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  28409275 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 28409323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 9098165 - 9098118
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  9098165 gcttctaatgaacttgcttctgatgacatcatcacttcaggagcactt 9098118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 13880828 - 13880875
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13880828 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 13880875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 21283436 - 21283314
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcct 122  Q
    ||||||||| | ||||||  |||| |||||||||||||||||| ||||  ||| || ||||| |  |||||| ||||||||||||||  |||||| ||||    
T  21283436 tttcaaaatggacgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcct 21283337  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    |||||||| || |||||||||||    
T  21283336 gatgaacttcaacttctggtgat 21283314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 170
Target Start/End: Complemental strand, 23280021 - 23279875
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||| ||||||||||   |||||||||||||||| ||||| ||||   || || ||||| ||||  | | |||||||||||||||  ||||||||||    
T  23280021 tttcaaactagccgttgctccacttttccagtcttctacaatgcttagacaagattaaatccatgaat-agcctttgaagctttaagtcttgcatctcct 23279923  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttc 170  Q
    |||||||| || ||||||||||||  || ||||| | |||||||||||    
T  23279922 gatgaactacaacttctggtgattttcaccttctgacgaacttgcttc 23279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 13730613 - 13730566
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||||    
T  13730613 gcttctaatgaacttgtttatgatgacgtcatcacttcaggagcactt 13730566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 16316480 - 16316433
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  16316480 gcttctgatgaacttgcttctgatgacatcatcacttcaggagcactt 16316433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 48805795 - 48805736
Alignment:
Q  151 gcttctaatgaactt-gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| |||||||| |||||||||||||||| |||||||| ||||||||||||| ||||    
T  48805795 gcttctgatgaactttgcttctgatgacgtcatcacttcagaagcactttgtcttcagga 48805736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 22578011 - 22577962
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  22578011 tttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 22577962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 11793068 - 11793124
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| ||| |||||||||||  |||||||||||||||||| ||||||||||||||    
T  11793068 aacaacctttaaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 11793124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 237
Target Start/End: Complemental strand, 13018497 - 13018358
Alignment:
Q  96 cttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    |||||||||||||||||  | ||| |  ||||||| ||||||||||||||   | |||||| ||||  | |||||||| ||||||| |||||||||||||    
T  13018497 cttttgaagctttaagtctcgtcttcatatgaacttcagcttctggtgatcttctgcttctgatgaggt-gcttctgaagacgtcatcacttcaggagca 13018399  T
Q  196 ctttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||    ||| |||| || |||||||||||||||| |||||||    
T  13018398 ctaaa-cttcaggagcacttttcttcagacgcttgaagcttc 13018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 13260539 - 13260498
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  13260539 atgaacttgcttctgatgacatcatcacttcaggagcacttt 13260498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 13302971 - 13303027
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| |||||||||||||||  |||||||||| ||||||| ||||||||||||||    
T  13302971 aacaacctttgaagctttaagtcttgcatctcctaatgaactacagcttctggtgat 13303027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 24788302 - 24788358
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| |||||||||||||||  |||||||||| ||||||| ||||||||||||||    
T  24788302 aacaacctttgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgat 24788358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 24788345 - 24788394
Alignment:
Q  149 cagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||  ||| ||||||||||||||||||| ||||||||||||||||    
T  24788345 cagcttctggtgatcttgcttctgatgacgtcatcacttcaggagcactt 24788394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 2265420 - 2265368
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  2265420 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 2265368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 4494667 - 4494718
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctg 140  Q
    |||||| |||||||||||||||  |||||||||||||||||| |||||||||    
T  4494667 aacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctg 4494718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 22577944 - 22577896
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||| ||||||||| ||||||||| |||||||||||||||||    
T  22577944 gcttctgatgaccttgcttctaatgacgtcatcacttcaggagcacttt 22577896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 13137830 - 13137759
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||| ||| ||||||| |||||||||||||||||| ||| |||| || || |||||||| |||| |||||||    
T  13137830 gcttttgaagacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagatgcttcaagcttc 13137759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 13303075 - 13303122
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  13303075 gcttctgatgaagttgcttctaatgacgtcatcacttcaggagcactt 13303122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 4821729 - 4821767
Alignment:
Q  171 tgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  4821729 tgatgacgtcatcacttcaggagcactttgtcttcagga 4821767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 4821760 - 4821806
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgcttta 231  Q
    |||||||||| ||||||||| |||| || ||||||||||||||||||    
T  4821760 cttcaggagcgctttgtcttcaggagcagttttcttcagacgcttta 4821806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 19236924 - 19236886
Alignment:
Q  160 gaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  19236924 gaacttgcttctgatgacgtcatcacttcagaagcactt 19236886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 21692451 - 21692504
Alignment:
Q  94 aacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||||  |||||||||| ||||||| ||||||||| ||||    
T  21692451 aacttttgaagctttaagtcttgcatctcctaatgaacttcagcttctgatgat 21692504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 35952609 - 35952559
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgt 201  Q
    |||||| ||||| |||||||||||| ||||| |||||||||| ||||||||    
T  35952609 gcttctgatgaatttgcttctgatgtcgtcatcacttcaggaacactttgt 35952559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Complemental strand, 5000764 - 5000703
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||| ||  |||||||||||||||||| ||| |||| || || ||||||||    
T  5000764 cttgcttctgatgacatcgtcacttcaggagcactttgacttcaggatcacttctcttcaga 5000703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 12366664 - 12366623
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||||||| ||||||||| |||| |||||||||||||||||    
T  12366664 atgaacttgattctgatgatgtcatcacttcaggagcacttt 12366623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 16316554 - 16316498
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| |||||||||||||||  |||||| ||||||||||| || |||||||||||    
T  16316554 aacaacctttgaagctttaagtcttgcatcccctgatgaacttcaacttctggtgat 16316498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 24794679 - 24794626
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    |||||| || |||| |||||||||||||||| |||||||| |||||||| ||||    
T  24794679 gcttctgataaactagcttctgatgacgtcatcacttcagaagcactttttctt 24794626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 48062725 - 48062664
Alignment:
Q  177 cgtcaccacttcaggagcactt-tgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| ||||||||||||||||    ||| |||| |||||||||||||||||||||||||||    
T  48062725 cgtcatcacttcaggagcacttcacacttcaggagcaattttcttcagacgctttaagcttc 48062664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 4494725 - 4494757
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcact 197  Q
    ||||||||||||||||| |||||||||||||||    
T  4494725 tgcttctgatgacgtcatcacttcaggagcact 4494757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 5685926 - 5685986
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| |||||||| |||||||   ||| |||| || |||||||||||    
T  5685926 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 5685986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 12366737 - 12366690
Alignment:
Q  99 ttgaagctttaagtt--gcatctcctgatgaactgcagcttctggtga 144  Q
    |||||||||||||||  ||| ||||||||||||| |||||||||||||    
T  12366737 ttgaagctttaagttttgcacctcctgatgaacttcagcttctggtga 12366690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 14745544 - 14745480
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  14745544 tgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcagatgctt 14745480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 23264466 - 23264402
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  23264466 tgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcagatgctt 23264402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 158; Significance: 3e-84; HSPs: 4)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 34850 - 34641
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||    
T  34850 ctttgaagaataagcatccaatgcatttcaaaatattcgttgccatacttttccagtcttctgcaatttctaggcgagtttgaatccttgaaacaacttt 34751  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  34750 tgaaactttaagttgcatctcctgaagaactgcagcttctagtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 34651  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  34650 gtcttcagga 34641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 25710 - 25535
Alignment:
Q  2 tttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| | |||| ||||||||||||||||||||||||||    
T  25710 tttgaagaataagcatccaatgcatttcaaaatatctgttgccatacttttccagtcttttgcaatttctaggcgagtttgaatccttgaaacaactttt 25611  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||| |||||||||||||    
T  25610 gaaactttaagttgcatctcctgatgaactgcagcttctggtgatacatagcttctgatgaagttgcttctgatga 25535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 25538 - 25487
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  25538 atgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 25487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 36057 - 36013
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||    
T  36057 gcttctgatgaacttgcttctgatgacgtcatcacttcaagagca 36013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 3e-84; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 17398726 - 17398529
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17398726 ctttgaagaataagcatccaatgcctttcaaaatagtcgttgctatacttttccagtcttctgcaattttaggcgagtttgaatccttgaaacaactttt 17398627  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  17398626 gaagctttaagttgcatctcctgatgaaccgcagcttctggtgattcatagcttctgatgaacttgcttctgatgacgtcatcacttcaagagcactt 17398529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 22190905 - 22191115
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| | || |  |||| || ||||||||||| ||||    
T  22190905 ctttgaagaatcagcatccaatgcatttcaaaatagttgttgccatacttttccagtcttctgcaatttctaagcaagttagagtccttgaaacagcttt 22191004  T
Q  100 tgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||  ||||||||| || ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  22191005 tgaaaactttaagttccacctcttgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactt 22191104  T
Q  199 tgtctttagga 209  Q
    |||||||||||    
T  22191105 tgtctttagga 22191115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 14571161 - 14571301
Alignment:
Q  69 ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgct 168  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  14571161 ttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgct 14571260  T
Q  169 tctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  14571261 tctgatgacgtcatcacttcaggagcactttgtcttcagga 14571301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 204
Target Start/End: Original strand, 10692944 - 10693123
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||   ||||||||||||||||||||| || ||  |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  10692944 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagttgcatctcctga 10693043  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  10693044 tgaactacagcttctggtgattctcagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtctt 10693123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 204
Target Start/End: Original strand, 10906710 - 10906889
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||   ||||||||||||||||||||| || ||  |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  10906710 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagttgcatctcctga 10906809  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  10906810 tgaactacagcttctggtgattctcagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtctt 10906889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 29 - 197
Target Start/End: Original strand, 6517581 - 6517750
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||  |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  6517581 caaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaataacttttgaagctttaagttgcatctcctgatga 6517680  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    ||| || ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||| |||||||    
T  6517681 actacaacttctggtgattctcagcttctgatgaacttgcttctgatgacgtcatcacttcaagagcact 6517750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 40860726 - 40860902
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | |||| |||||  | ||||||||||||||||    
T  40860726 ctttgaagaataagcatccaatgcatttcaaattagccattgccatacttttccagtcttctgcaatttctaggcgagttatagtccttgaaacaacttt 40860825  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||| |||| ||||| |||||| ||||| ||||||    
T  40860826 tgaaactttaagttccatctcctgatgaactgtagcttctggtgatacacaacttctgatgaacctgcttatgatga 40860902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 3105437 - 3105243
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3105437 tttcaaaatagccgttggaatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcctgat 3105338  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagac 225  Q
    |||||||||||||||                 |||||||||||| ||||||||||| |||||||||||||| ||||||| |||| || ||||||||||||    
T  3105337 gaactgcagcttctg-----------------atgaacttgcttttgatgacgtcatcacttcaggagcaccttgtcttcaggagcagttttcttcagac 3105255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 15475195 - 15474985
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaat-gttaggtgagtttgaatccttgaaacaacttt 99  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||  ||||  |||||  ||||||||||||| ||||    
T  15475195 ctttgaggagtaagcatccaatgcatttcaaaatagccgttgccatacttttctactcttctgcaatctttagacgagttaaaatccttgaaacagcttt 15475096  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac-ttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||| |||| ||||  || ||||||||||||| ||||||||||||| |||||||| | |||||| |||||||||||||||||| |||||||  |||||||    
T  15475095 tgaaactttgagttcaatttcctgatgaactgtagcttctggtgatacacagcttttgatgaactttgcttctgatgacgtcatcacttcataagcactt 15474996  T
Q  199 tgtctttagga 209  Q
    |||||| ||||    
T  15474995 tgtcttcagga 15474985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 413095 - 413279
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||||||||||   ||||||| |||||||||||||| ||||  ||| |||||||| |  |||||||||||||||||||||||| |||||||||    
T  413095 tttcaaattagccgttgcttcacttttcgagtcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagttgaatctcctga 413194  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| |||||| || ||||||||||| ||||    
T  413195 tgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcactacttcatgaacactttgtcttcagga 413279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 2 - 209
Target Start/End: Complemental strand, 39419786 - 39419578
Alignment:
Q  2 tttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||| |||||| |||||||| |||| |||||||||||| ||| || ||||||| || ||| | |||| ||||| || ||||||||||| |||||    
T  39419786 tttgaagaattagcatcaaatgcattccaaactagccgttgccacactctttcagtcttttgtaatttctaggcgagttagagtccttgaaacagctttt 39419687  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    ||| |||| ||||  || ||||||||||||||||||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||||| |||||||||    
T  39419686 gaaactttgagttcaatttcctgatgaactgcagcttctggtgatacacaacttctgatgaactagcttctgatgacgtcatcacttcagaagcactttg 39419587  T
Q  201 tctttagga 209  Q
    |||||||||    
T  39419586 tctttagga 39419578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 19884795 - 19885009
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||| ||| ||||||   |||||||||||||||||||||| ||||  ||| || ||||| |||| || | |||||||||||||||  ||||||||||    
T  19884795 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccatgaa-catcctttgaagctttaagtcttgcatctcct 19884893  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccac-ttcaggagcactttgtctttaggaacaattttcttc 221  Q
    |||||||| |||||||||||||||  |||||||| ||||||||||||||||||||||| |||| |||| |||||||||||||| |||| || ||||||||    
T  19884894 gatgaactacagcttctggtgattgtcagcttctgatgaacttgcttctgatgacgtcgccactttcaagagcactttgtcttcaggagcagttttcttc 19884993  T
Q  222 agacgctttaagcttc 237  Q
    ||||||||||||||||    
T  19884994 agacgctttaagcttc 19885009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 9751592 - 9751382
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaa-tgttaggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||| | || | ||||| ||||| || |||||||||||  |||    
T  9751592 ctttgaagaattagcatccaatgcatttcaaactagccgttgccacactcttccagtcttccgtaatttttaggcgagttagagtccttgaaacaggttt 9751493  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac-ttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||   || || | |||||| |||||||||||||||||||||||| || ||||||| |||||| |||||||||||||||||| |||||||  |||||||    
T  9751492 tgaaaacttgagctccatctcttgatgaactgcagcttctggtgatacatagcttctgatgaactttgcttctgatgacgtcatcacttcataagcactt 9751393  T
Q  199 tgtctttagga 209  Q
    |||||| ||||    
T  9751392 tgtcttcagga 9751382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 54680023 - 54680218
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||   |||||||||||||||||||||  ||||  ||||||||  || | ||||| |||||||||||||||||||||||||||||    
T  54680023 tttcaaaatagttgttgcttcacttttccagtcttctgcaatcattagacgagtttga--ccattaaacagcttttgaagctttaagttgcatctcctga 54680120  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||||||||  ||||||               ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  54680121 tgaactgcagcttctggtgattttcagctt---------------ctgatgacgtcaccacttcaggagcactttgtcttcaggagcaattttcttcaga 54680205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 95 - 195
Target Start/End: Original strand, 3793286 - 3793386
Alignment:
Q  95 acttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagc 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||  ||||||||||| ||||||||||||||||||||||||    
T  3793286 acttttgaagctttaagttgcatctcctgatgaactgcagcttctagtgattttcagcttctggtgaacttgcttttgatgacgtcaccacttcaggagc 3793385  T
Q  195 a 195  Q
    |    
T  3793386 a 3793386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 10073028 - 10073243
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||| |||| |||||   |||||||||||||||||| ||| |||   ||| || ||||| |||| |||| |||||||||||||||  ||||||||||    
T  10073028 tttcaaactagcagttgcttcacttttccagtcttctgctatgcttaaacgagattaaatccatgaa-caacctttgaagctttaagtcttgcatctcct 10073126  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaactt--gcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttctt 220  Q
    |||||||| | ||||||||| |||  ||||||||  |||  ||  |||||||||||| |||||||||||||||||||||||||| |||| || |||||||    
T  10073127 gatgaactactgcttctggtaattttcagcttctggtgattttcagcttctgatgacatcaccacttcaggagcactttgtcttcaggagcacttttctt 10073226  T
Q  221 cagacgctttaagcttc 237  Q
    |||||||||||||||||    
T  10073227 cagacgctttaagcttc 10073243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 38513937 - 38514148
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta--ggtgagtttgaatccttgaaacaactt 98  Q
    ||||||||||| | |||||||||||||| ||| ||||||||| || ||| ||||||||||||  ||| |||  || || || || ||||||||||| |||    
T  38513937 ctttgaagaattaacatccaatgcattttaaactagccgttgtcacactcttccagtcttctttaattttataggcgaattagagtccttgaaacagctt 38514036  T
Q  99 ttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaact-tgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||   || |||| |||||| |||||||||||||||||| ||||| || ||||||| |||||||  |||||||||||| ||| |||||||| ||||||    
T  38514037 ttgaaagcttgagttccatctcttgatgaactgcagcttctagtgatacatagcttctgatgaactaggcttctgatgacatcatcacttcagaagcact 38514136  T
Q  198 ttgtctttagga 209  Q
    ||||||| ||||    
T  38514137 ttgtcttcagga 38514148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 55731872 - 55732023
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaat-gttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| |||||   ||| | ||||||||| |||||| |||||  |||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  55731872 tttcaaaatagtcgttgatttacctctccagtcttttgcaattgttagacgagtttgaatccattaaacaacttttgaagttttaagttgcatctcctga 55731971  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    |||||||||||||| |||||||| ||||||||||  |||||| ||||||||||    
T  55731972 tgaactgcagcttccggtgattctcagcttctaa-aaacttgtttctgatgac 55732023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 17247360 - 17247487
Alignment:
Q  50 tttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattca 148  Q
    |||||| |||||||||||| ||||  ||| |||||||| |  ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||      
T  17247360 tttccaatcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagattcatctcctgatgaactgcagcttctggtgatttt 17247459  T
Q  149 cagcttctaatgaacttgcttctgatga 176  Q
    |||||||| |||||||||||||||||||    
T  17247460 cagcttctgatgaacttgcttctgatga 17247487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 13576132 - 13575935
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  ||||   |||||||||||| ||||||||||||||    
T  13576132 tttcaaactaggcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagctttatgttgcatctcctga 13576033  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||||||||  ||||||||               ||||||||||||||||||||||||||||||||| |||| || |||||||||||    
T  13576032 tgaactgcagcttctggtgattttcagcttct---------------gatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcaga 13575948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 20977518 - 20977658
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttg 101  Q
    |||| ||||||||||||||||| |||||||||||||||||  | ||||| | ||||||||||||| ||  || ||| |||||||||||||||||||||||    
T  20977518 ttgaggaataagcatccaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaacaacttttg 20977616  T
Q  102 aagctttaagttgcatctcctgatgaactgcagcttctggtga 144  Q
    |||||||| |||| |||| ||||||| ||||||||||||||||    
T  20977617 aagctttatgttg-atcttctgatgatctgcagcttctggtga 20977658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 27188688 - 27188548
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta-ggtgagtttgaatccttgaaacaacttttg 101  Q
    |||| ||||||||||||||||| ||||||||||| |||||  | ||||| | ||||||||||||| ||  || ||| |||||||||||||||||||||||    
T  27188688 ttgaggaataagcatccaatgcttttcaaaatagtcgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaacaacttttg 27188590  T
Q  102 aagctttaagttgcatctcctgatgaactgcagcttctggtga 144  Q
    |||||||| |||| |||| ||||||| ||||||||||||||||    
T  27188589 aagctttaggttg-atcttctgatgatctgcagcttctggtga 27188548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 236
Target Start/End: Original strand, 56034666 - 56034878
Alignment:
Q  25 atttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggt-gagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcc 121  Q
    |||||||||||| ||||||   ||| |||||||||||||||||| | ||  ||| || ||||| |  ||||   |||||||||||||||  ||||||| |    
T  56034666 atttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttggacgagattaaatccattgaacagtctttgaagctttaagtcttgcatcttc 56034765  T
Q  122 tgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttc 221  Q
    ||||||||| ||||||||||||||     |||||| ||||||||||||||||| |||||| |||||||| ||||||||  ||| |||| || ||||||||    
T  56034766 tgatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgattacgtcatcacttcagaagcacttttacttcaggatcacttttcttc 56034863  T
Q  222 agacgctttaagctt 236  Q
    |||||||| ||||||    
T  56034864 agacgcttcaagctt 56034878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 174
Target Start/End: Complemental strand, 17700835 - 17700680
Alignment:
Q  16 atccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta-ggtgagtttgaatccttgaaacaacttttgaagctttaagttg 114  Q
    ||||||||| |||||||||||||||||  | ||||| | ||||||||||||| ||  || ||| ||||||||||||||||||||||||||||||| ||||    
T  17700835 atccaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaacaacttttgaagctttaggttg 17700737  T
Q  115 catctcctgatgaactgcagcttctggtgattcac-agcttctaatgaacttgcttctgat 174  Q
     |||| ||||||| ||||||||||||||||   ||  |||||| |||||||||||||||||    
T  17700736 -atcttctgatgatctgcagcttctggtga---acttgcttctgatgaacttgcttctgat 17700680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 233
Target Start/End: Complemental strand, 22675538 - 22675345
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   ||||||| |||||||||||||| ||||  ||| || ||||| |  |||| | |||||||||||| |||||||||||| |    
T  22675538 tttcaaactagtcgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgttgcatctcctaa 22675439  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||| ||||      ||         ||||||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||    
T  22675438 tgaactgcagcttctggggatt------tt---------ttgcttctgatgacgtcactacttcaggagcactttgtctttaggagaagttttcttcaga 22675354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 3499702 - 3499560
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaa--tgttaggtgagtttgaatccttgaaacaactttt 100  Q
    ||||||||  ||||||||||| |||||||  ||||||||| ||||||  |||||||||||| ||  | || |||||| |||||||||||||||| |||||    
T  3499702 ttgaagaaatagcatccaatgtatttcaatctagccgttgtcatactcctccagtcttctgtaatctttttggtgagcttgaatccttgaaacagctttt 3499603  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtga 144  Q
    |||||| || |||| |||| ||||||| ||||||||||||||||    
T  3499602 gaagctctaggttg-atcttctgatgatctgcagcttctggtga 3499560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 29680562 - 29680349
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||   || || ||||| |  |||||| |||| ||||||||||  ||||||||||    
T  29680562 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttggagctttaagtcttgcatctcct 29680463  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    | | ||||  |||||||||||||   |||||||| ||||  | |||||||||||||||| |||||||||||||||||| ||| ||||||| || ||||||    
T  29680462 ggtaaactagagcttctggtgatcttcagcttctgatgagat-gcttctgatgacgtcatcacttcaggagcactttgacttcaggaacacttctcttca 29680364  T
Q  223 gacgctttaagcttc 237  Q
    ||  ||| |||||||    
T  29680363 gatacttcaagcttc 29680349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 16853626 - 16853732
Alignment:
Q  75 gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
    |||||||||||  | |||||||||||||| ||| |||||||||||  |||| |||| || ||| |||||||||||||||||| || ||||||||||||||    
T  16853626 gagtttgaatctgttaaacaacttttgaaccttgaagttgcatcttttgatcaactacaacttatggtgattcacagcttctgataaacttgcttctgat 16853725  T
Q  175 gacgtca 181  Q
    |||||||    
T  16853726 gacgtca 16853732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 237
Target Start/End: Original strand, 16940184 - 16940282
Alignment:
Q  139 tggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||| |||||||| || |||||||||||||| |||||| ||||||| |||||||||  ||| |||| || ||||||||||||||||||||||||    
T  16940184 tggtgattctcagcttctgataaacttgcttctgattacgtcatcacttcaagagcactttaacttcaggagcagttttcttcagacgctttaagcttc 16940282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 14604784 - 14604698
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||| ||| |||| || || |||||||||| || |||||||    
T  14604784 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcactttgacttcaggagcacttctcttcagacgtttcaagcttc 14604698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 29121608 - 29121694
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||| ||||||||| || ||||||| |||||||||||||| |||  || ||||||||||||| ||||||||||    
T  29121608 gcttctgatgaacttgctactgatgacgccatcacttcaagagcactttgtcttcaggtgcagttttcttcagacgttttaagcttc 29121694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 8105731 - 8105883
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatcct-tgaaacaacttttgaagctttaagttgcatctcctg 123  Q
    ||||||||||||||||||   | |||||||||||||||||||  ||||  ||  ||||||||  | |||||||||||||||| ||||||||||||  ||     
T  8105731 tttcaaaatagccgttgcttcaattttccagtcttctgcaatccttagacgaagttgaatcccattaaacaacttttgaagccttaagttgcatcctcta 8105830  T
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||| ||| ||||||||||||   | ||||| || ||||||||||||||||    
T  8105831 atgaacggcaacttctggtgatttttaacttctgataaacttgcttctgatga 8105883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 9141096 - 9141183
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| | |||||||| ||||||||||||| |||||||||||||| |||||||| |||| || || ||||||||||| |||||||||    
T  9141096 gcttctgaagaacttgcatctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagcttc 9141183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 8105889 - 8105946
Alignment:
Q  152 cttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  8105889 cttctgatgaacttgcttctgatgacatcatcacttcaggagcactttgtcttcagga 8105946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 16940109 - 16940169
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatcc 86  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||  ||||||||||||    
T  16940109 tttcaaaatagtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatcc 16940169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 14904214 - 14904139
Alignment:
Q  149 cagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||| |||||||||||||||| ||||||| |||||||  ||||||||||||| |||| || || ||||||||    
T  14904214 cagcttctgatgaacttgcttctgaagacgtcatcacttcaatagcactttgtcttcaggagcacttctcttcaga 14904139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 37435553 - 37435431
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggt-gagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| ||||| |||||||||||| | ||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  37435553 tttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcttggacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 37435454  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    |||||||| ||||||||||||||    
T  37435453 gatgaacttcagcttctggtgat 37435431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 45833487 - 45833609
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||  |||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  45833487 tttcaaaatagaagttgcttaactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 45833586  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  |||||||||||||    
T  45833587 gatgaactagagcttctggtgat 45833609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 3395683 - 3395836
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   |||||| |||| |||||||||| ||||  ||  || ||||| |  |||||||||||||| |||||||  ||||||||||    
T  3395683 tttcaaaatagtcgttgcttcactttttcagttttctgcaatgcttagacgatatttaatccattgaacaacttttgaagatttaagtcttgcatctcct 3395782  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||  ||||||| |||||   || ||||| || ||||||||||||||||    
T  3395783 gatgaactatagcttctagtgatcttcaacttctgataaacttgcttctgatga 3395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 3483814 - 3483963
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   |||||||||||||||||||||| ||||  ||| || ||||| |  || |  ||||||||||||||||  |||||||| |    
T  3483814 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaatagtttttgaagctttaagtcttgcatctctt 3483913  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctg 172  Q
     |||||||  | |||||||||||   |||||||| |||||||||||||||    
T  3483914 aatgaactataacttctggtgatcttcagcttctgatgaacttgcttctg 3483963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 20977656 - 20977706
Alignment:
Q  159 tgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  20977656 tgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttcagga 20977706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 37435398 - 37435312
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||||| |  ||| |||| || || |||||||| |||| |||||||    
T  37435398 gcttctgatgaccttgcttctgatgacgtcatcacttcaggagcactattacttcaggagcacttctcttcagatgcttcaagcttc 37435312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 3499540 - 3499487
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    |||||| |||||||||||||||||||| ||| |||||||| |||||||||||||    
T  3499540 gcttctgatgaacttgcttctgatgacatcatcacttcagaagcactttgtctt 3499487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 27188550 - 27188505
Alignment:
Q  159 tgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  27188550 tgaacttgcttctgatgacgtcaacacttcagaagcactttgtctt 27188505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 55380492 - 55380541
Alignment:
Q  149 cagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  55380492 cagcttctgatgatcttgcttctgatgacgtcatcacttcaggagcactt 55380541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 3486351 - 3486395
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||    
T  3486351 tgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 3486395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 19620955 - 19620883
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||| |||||||||| ||||||| ||| |||| ||  | |||||||| ||||||||||||    
T  19620955 tgcttctgatgacgtcatcacttcaggatcactttgacttcaggagcacgtctcttcagatgctttaagcttc 19620883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 40846334 - 40846382
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  40846334 gcttctgatgaacttgtttctgatgacgtcatcacttcaggagcacttt 40846382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 6641916 - 6641963
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  6641916 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagcactt 6641963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 12601334 - 12601421
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||  ||||| ||||||| ||| |||||||||||||| |||||||| ||||||| || |||||||| || |||||||||    
T  12601334 gcttcttatgaaaatgcttttgatgacatcatcacttcaggagcacttttgtcttaaggaacacttctcttcagatgccttaagcttc 12601421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 14904374 - 14904252
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||| | ||||||   ||||||||||||||||||||||  |||  ||| || |||||||  || | |||||||||||||| ||  ||||||||||    
T  14904374 tttcaaaatggacgttgcttcacttttccagtcttctgcaatgcctagacgagattaaatcctttgaatagcttttgaagctttaggtcttgcatctcct 14904275  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    |||||||| || |||||||||||    
T  14904274 gatgaactacaacttctggtgat 14904252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 16632680 - 16632759
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||| |||||||||||||  |||| |||||||| ||||||||| |||||||| || || |||||||| |||| |||||||    
T  16632680 atgaccttgcttctgatggtgtcatcacttcagaagcactttgactttaggagcacttctcttcagatgcttcaagcttc 16632759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 23123597 - 23123646
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  23123597 tttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 23123646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 209
Target Start/End: Complemental strand, 25651047 - 25650977
Alignment:
Q  139 tggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||  ||||||| |||||||||||| |||||| |||| |||||||||| |||||| |||| ||||    
T  25651047 tggtgattcttagcttctgatgaacttgcttatgatgatgtcatcacttcaggaacactttatcttcagga 25650977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 29121463 - 29121557
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatct 119  Q
    ||||||||||| ||||||   |||||| |||||||||||||| || ||  ||| |||||||| | ||||| |||||||||| |||||||||||||    
T  29121463 tttcaaaatagtcgttgcttcactttttcagtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagccttaagttgcatct 29121557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 56533079 - 56532957
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatcct-tgaaacaacttttgaagctttaagttgcatctcctg 123  Q
    ||||||||||||||||||   | |||| ||||||||||||||  ||||  ||| ||||||||  | ||||| |||||||||| ||||||| ||||  ||     
T  56533079 tttcaaaatagccgttgcttcattttttcagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagccttaagttacatcctcta 56532980  T
Q  124 atgaactgcagcttctggtgatt 146  Q
    ||||||||||| |||||||||||    
T  56532979 atgaactgcagtttctggtgatt 56532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 23750684 - 23750732
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggt 142  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||||    
T  23750684 cttttgaagctttaagtcttgcatctcctgatgaacttcagcttctggt 23750732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 8105939 - 8105991
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  8105939 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 8105991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 17700678 - 17700630
Alignment:
Q  161 aacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||| ||||| || ||||||||||||| ||||    
T  17700678 aacttgcttctgatgacgtcatcactttagaagcactttgtcttcagga 17700630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 55732063 - 55732115
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  55732063 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 55732115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 3395853 - 3395896
Alignment:
Q  161 aacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||    
T  3395853 aacttgcttctgatgacgtcatcactttaggagcactttatctt 3395896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 9141005 - 9141092
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt 112  Q
    ||||||||||| ||||||  ||||||||||||||||| ||||| ||||  ||| |||||||| |  ||||||  ||||||||||||||    
T  9141005 tttcaaaatagtcgttgctttacttttccagtcttctacaatgcttagacgagattgaatccattgaacaacccttgaagctttaagt 9141092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 14833489 - 14833607
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| |||||||  |  |||| | ||||||||||||||  |||||||||||    
T  14833489 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatcctttgaagctttaagtcttgcatctcct 14833588  T
Q  123 gatgaactgcagcttctgg 141  Q
    |||||| | || |||||||    
T  14833589 gatgaattacaacttctgg 14833607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 16632533 - 16632655
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| |||||    ||| |||||||||||||||||| |||   ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  16632533 tttcaaaatagtcgttgattcactcttccagtcttctgcaatgcttatacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 16632632  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  ||||||| |||||    
T  16632633 gatgaactttagcttctagtgat 16632655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 28066639 - 28066698
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||| | ||||||||||| |||  |||||||| || |||||||||||    
T  28066639 tgcttctgatgacgtcatctcttcaggagcagtttagctttaggagcagttttcttcaga 28066698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 40860907 - 40860950
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||    
T  40860907 gcttctgatgacgtcatcacttcagaagcactttgtcttcagga 40860950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 45833639 - 45833677
Alignment:
Q  161 aacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  45833639 aacttgcttctgatgacgtcatcacttcaagagcacttt 45833677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 8182676 - 8182643
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||| ||||||||||||||||    
T  8182676 tgcttctgatgacgtcatcacttcaggagcactt 8182643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 12811130 - 12811074
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| |||||||||||||||  |||||||||| |||||||  |||||||||||||    
T  12811130 aacaacctttgaagctttaagtcttgcatctcctaatgaactagagcttctggtgat 12811074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 18077706 - 18077673
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||| ||||||||||||||||    
T  18077706 tgcttctgatgacgtcatcacttcaggagcactt 18077673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 3395894 - 3395946
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| |||||||||| ||| |||| || || |||||||||||||||||||||    
T  3395894 cttcatgagcactttgacttcaggagcagttctcttcagacgctttaagcttc 3395946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 19621013 - 19620962
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctg 140  Q
    |||||| ||||||||||||| |  |||||||||||||||||| |||||||||    
T  19621013 aacaacctttgaagctttaactcttgcatctcctgatgaacttcagcttctg 19620962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 20648434 - 20648370
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  20648434 tgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcagatgctt 20648370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 25650984 - 25650932
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| | || |||| || ||||||||||||||||||||||||    
T  25650984 cttcaggagcgctttattttcaggagcagttttcttcagacgctttaagcttc 25650932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 48371575 - 48371650
Alignment:
Q  151 gcttctaatgaactt--gcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||| |||  |||||||||||||||| |||||||| |||||||   ||| |||| || |||||||||||    
T  48371575 gcttctaatgaccttctgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 48371650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 55380454 - 55380505
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||  |||||||||| ||||||| ||||||||| ||||    
T  55380454 cttttgaagctttaagtcttgcatctcctaatgaacttcagcttctgatgat 55380505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 80)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 31968084 - 31967876
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  31968084 ctttgaagaataagcatccaatgcatttcaaaatagttgttgctatacttttccagtcttctgcaattttatgcgagtttgaatccttgaaacaactttt 31967985  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  31967984 gaggctttaagttgcatcttctgatgaactgcagcttctggtgattcacaacttcttatgaacttgcttctgatgatgtcatcacttcaggagcactttg 31967885  T
Q  201 tctttagga 209  Q
    |||| ||||    
T  31967884 tcttcagga 31967876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 28550959 - 28550751
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||| |||||||||||  ||| | ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||    
T  28550959 ctttgaagaataagcatccaatgcctttcaaaatagttgtttctatacttttccagtcttctgcaattttaggcgagtttgaatccttgaaacagctttt 28550860  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    || | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  28550859 gaggttttaaattgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttatgatgacgtcatcacttcaggagcactttg 28550760  T
Q  201 tctttagga 209  Q
    |||| ||||    
T  28550759 tcttcagga 28550751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 40332146 - 40332355
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaa-caacttt 99  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||| |||| || ||||    
T  40332146 ctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttccagtcttctgcaattttaggcgagtttgaatcctagaaagcagcttt 40332245  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
      |||||||  ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  40332246 gaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttatgatgacgtcatcacttcaggagcacttt 40332345  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  40332346 gtcttcagga 40332355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 1587074 - 1586865
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||| |||||||||||| |||||||||||||||||  |||||||| |||||||||||||| || || ||||||||||||||| ||||||||||    
T  1587074 ctttgaagaattagcatccaatgcctttcaaaatagccgttgtaatactttttcagtcttctgcaatcttcagatgagtttgaatcctttaaacaacttt 1586975  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||| |||||||||    
T  1586974 tgaagctttaagttccatctcctgatgaactccagcttctggtgattctcagcttctgatgaacttgtttctgatgacgtcatcacttcatgagcacttt 1586875  T
Q  200 gtctttagga 209  Q
     |||| ||||    
T  1586874 atcttcagga 1586865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 44840493 - 44840698
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||| |||||    
T  44840493 ctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatactttttcagtct-ctgcaatgttaggcgagtttgaatccttgaaacagctttt 44840591  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| |    |||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  44840592 gaagctttaagttgcatctcttgatgaactgcagcttctgatgaat--ttgcttctgatgatcttgcttctgatgacgtcatcacttcaggagcactttg 44840689  T
Q  201 tctttagga 209  Q
    |||| ||||    
T  44840690 tcttcagga 44840698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 22785696 - 22785521
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||| ||||||||| ||||| |||||||||  ||||||| | |||||    
T  22785696 ctttgaagaataagcatccaatgcctttcaaaatagtcgttgctatacatttccagttttctgcaattttaggcgagtttgaaatcttgaaatagctttt 22785597  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||    
T  22785596 gaagctttaagttgcatctcctgatgaactgtagcttctggtgattcacagcttctgatgaacttgcttttgatga 22785521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20152042 - 20151829
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaa-gttgcatctcctg 123  Q
    ||||||| || |||||||   |||||||||||||||||||||| ||||  ||| || ||||| |  |||||||||||||||||||| |||||||||||||    
T  20152042 tttcaaactaaccgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaatgttgcatctcctg 20151943  T
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcag 223  Q
    |||| ||||||||||||||||||  |||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||| |||| || ||||||||||    
T  20151942 atgagctgcagcttctggtgattttcagcttctgatgaacttgtttctgatgacgtcactatttcaggagcactttgtcttcaggagcagttttcttcag 20151843  T
Q  224 acgctttaagcttc 237  Q
    ||||||||||||||    
T  20151842 acgctttaagcttc 20151829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 3277089 - 3277284
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||| || |||| |||||||||  |||||||| |||||||||||||| || ||   ||||||||| ||| ||||||||||    
T  3277089 ctttgaagaataagcatccaatgccttccaaattagccgttgttatactttttcagtcttctgcaatcttcagacaagtttgaattctttaaacaacttt 3277188  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    |||||||||||||| |||||||| ||||||| |||||||| ||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||    
T  3277189 tgaagctttaagttccatctcctaatgaactccagcttctagtgattcccagcttctgatgaacttgcttctaatgacgtcatcacttcaggagca 3277284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 22776329 - 22776138
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||| ||||| |||| |||| ||||||||||||||||    
T  22776329 ctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttcaagtcttttgcaattttaggcgagtctgaaaccttgaaacaactttt 22776230  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    ||||||||||||||||||||||||||||||                 ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  22776229 gaagctttaagttgcatctcctgatgaact-----------------acagcttctgatgaacttgcttctaatgacgtcatcacttcaggagcactttg 22776147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 22781707 - 22781516
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| |||||| ||||| |||| |||| ||||||||||||||||    
T  22781707 ctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttcaagtcttttgcaattttaggcgagtctgaaaccttgaaacaactttt 22781608  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    ||||||||||||||||||||||||||||||                 ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  22781607 gaagctttaagttgcatctcctgatgaact-----------------acagcttctgatgaacttgcttctaatgacgtcatcacttcaggagcactttg 22781525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 237
Target Start/End: Complemental strand, 28711700 - 28711492
Alignment:
Q  31 aaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaac 129  Q
    |||||| ||||||  |||||||||||||||||||||| || ||   || |||||||| | ||||| |||||||||| |||||||||||| | | ||||||    
T  28711700 aaatagtcgttgctttacttttccagtcttctgcaatctttagacaaggttgaatccattaaacagcttttgaagccttaagttgcatcccattatgaac 28711601  T
Q  130 tgcagcttctggtgattcacag-cttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgct 228  Q
    |||||||||||||||||    | ||||| || |||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| |||||    
T  28711600 tgcagcttctggtgattttttggcttctgataaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttttcttcaaacgct 28711501  T
Q  229 ttaagcttc 237  Q
    |||||||||    
T  28711500 ttaagcttc 28711492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 6574130 - 6573917
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg--ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctg 123  Q
    ||||||| ||| ||||||   ||||||||||||||||||||||  ||||  ||| || ||||  |  |||||| |||||||||||| ||||||||| |||    
T  6574130 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcattagacgagattaaatcaattgaacaacctttgaagctttatgttgcatcttctg 6574031  T
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcag 223  Q
    |||||||||| ||||| ||||||  |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| || | || ||||||||||    
T  6574030 atgaactgcaacttctagtgattttcagcttctgatgaacttgcttctgatgacgtcactactttaggagcactttgtcttcagaagcatttttcttcag 6573931  T
Q  224 acgctttaagcttc 237  Q
    | | ||||||||||    
T  6573930 atgttttaagcttc 6573917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 33074322 - 33074470
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||  |||||||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  33074322 caaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctttaaacagcttttgaagttttaagttgcatctcctgatga 33074421  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| || ||||| ||||||| |||||||| || ||||||||||||||||    
T  33074422 actacaacttctagtgattctcagcttctgataaacttgcttctgatga 33074470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 34321943 - 34321792
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| |||||| |||||||||||| |||||||||| || ||  |||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  34321943 tttcaaaatagtcgttgctatacttttccaggcttctgcaatctttagacgagtttgaatcctttaaacagcttttgaggctttaagttgcatctcctga 34321844  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||| | |||||||| ||||||| |||||||| || ||||||||||||||||    
T  34321843 tgaattacagcttctagtgattctcagcttctgataaacttgcttctgatga 34321792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 31327970 - 31327821
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaactttt-gaagctttaagttgcatctcctgatg 126  Q
    |||||||| ||||||   |||| || ||||||||||||| || ||| |||||||||||| |  |||||||||| ||| ||||||||||||||||||||||    
T  31327970 caaaatagtcgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaagttgcatctcctgatg 31327871  T
Q  127 aactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  31327870 aactgcagcttctggtgattcacagcttctgataaacttgcttctgatga 31327821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 31334691 - 31334542
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaactttt-gaagctttaagttgcatctcctgatg 126  Q
    |||||||| ||||||   |||| || ||||||||||||| || ||| |||||||||||| |  |||||||||| ||| ||||||||||||||||||||||    
T  31334691 caaaatagtcgttgcttcacttctctagtcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaagttgcatctcctgatg 31334592  T
Q  127 aactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  31334591 aactgcagcttctggtgattcacagcttctgataaacttgcttctgatga 31334542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 6392727 - 6392912
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatc-cttgaaacaacttttgaagctttaagttgcatctcctg 123  Q
    ||||||||||| ||||||   |||||||||||||||||||||  ||||  ||| ||||||| | | ||||| |||||||||| ||||| ||||||  |||    
T  6392727 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcacattaaacagcttttgaagccttaagatgcatcctctg 6392826  T
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||| ||| ||||||||   ||||||| || ||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  6392827 atgaactgcaacttatggtgatttttagcttctgataaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 6392912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 23392698 - 23392569
Alignment:
Q  12 aagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttttgaagctttaa 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||| ||||| || |||||||||||||||||||| |||| |    
T  23392698 aagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgtaatttctaggcgagttagagtccttgaaacaacttttgaaactttga 23392599  T
Q  111 gttgcatctcctgatgaactgcagcttctg 140  Q
    |||  || | ||||||||||| ||||||||    
T  23392598 gttcaatttactgatgaactgtagcttctg 23392569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 14581574 - 14581667
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaaca 94  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||    
T  14581574 ctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatatttttccagtcttctgcaattttaggcgagttttaatccttgaaaca 14581667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 209
Target Start/End: Complemental strand, 31800873 - 31800710
Alignment:
Q  47 acttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||||||   |||  ||||||| ||||   || || ||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  31800873 acttttccagtcttctgcaataaatagacgagtttggatccactaagcagcttttgaagctttaagttgcatcccatgatgaactgcagtttctggtgat 31800774  T
Q  146 tcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |    |||||| || |||||||||||||||||| || |||||||||||||||||||||| ||||    
T  31800773 tatttgcttctgataaacttgcttctgatgacgccatcacttcaggagcactttgtcttcagga 31800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 24377194 - 24377369
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaac-ttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||  ||||||||||||| |||| | | || ||||| |  |||||| ||||||||||||||||  |||||||| |    
T  24377194 tttcaaaatagtcgttgcttcactcttctggtcttctgcaatgctaggcgtgattaaatccattgaacaaccttttgaagctttaagtcttgcatctctt 24377293  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||| ||||||||||||||    ||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  24377294 gatgaacttcagcttctggtgatctttagcttctgatgaactttcttctgatgacgtcatcacttcaggagcactt 24377369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 236
Target Start/End: Original strand, 19540509 - 19540718
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||| |||||||||||||   ||| | | |||||||||||||| |||| |||| || ||||| |  |||||| |||||||||||||||  |||||||| |    
T  19540509 tttcgaaatagccgttgcttcactctcctagtcttctgcaatgcttagatgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcat 19540608  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    |||||||| ||||||||||||||     |||||| ||||  | |||||||||||||||| |||||||||||||| | | ||| ||||||| |||||||||    
T  19540609 gatgaacttcagcttctggtgatctt--gcttctgatgaggt-gcttctgatgacgtcatcacttcaggagcac-tagacttcaggaacacttttcttca 19540704  T
Q  223 gacgctttaagctt 236  Q
    ||||||||||||||    
T  19540705 gacgctttaagctt 19540718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 35744004 - 35743858
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 128  Q
    |||||||| |||||| ||||||||||| | ||||||||| ||  |   |||||| ||  | ||||||||||||| |||||||||||||||||||||||||    
T  35744004 caaaatagtcgttgctatacttttccaatattctgcaatctttagac-gtttgagtctgttaaacaacttttgacgctttaagttgcatctcctgatgaa 35743906  T
Q  129 ctgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    || |||||||||||||||  |||||||  || ||||||||||||||||    
T  35743905 ctacagcttctggtgattttcagcttccgataaacttgcttctgatga 35743858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 236
Target Start/End: Original strand, 23235100 - 23235327
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||  |||| |||||||||||||||||| ||||  ||| || ||||| |  |||| | |||||||||||||||  |||||||| |    
T  23235100 tttcaaaatagtcgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcat 23235199  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatga--------------acttgcttctgatgacgtcaccacttcaggagcactttgtctttagg 208  Q
    ||||||||  ||||||||||||||  |||||||| ||||              |||||||||||||||||||| |||||||||||||||||| ||| | |    
T  23235200 gatgaactagagcttctggtgattttcagcttctgatgagatgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgacttcaag 23235299  T
Q  209 aacaattttcttcagacgctttaagctt 236  Q
    | || || ||||||||||||||||||||    
T  23235300 agcacttctcttcagacgctttaagctt 23235327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 28701236 - 28701115
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggt-gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||| | |||||  |||||||||||||||||||||| ||| |  ||| |||||||  | ||||| |||||||||| |||||||||||| | |||    
T  28701236 tttcaaaatatctgttgctttacttttccagtcttctgcaatcttaagacgaggttgaatctattaaacagcttttgaagccttaagttgcatcccatga 28701137  T
Q  125 tgaactgcagcttctggtgatt 146  Q
    ||||||||||||||||||||||    
T  28701136 tgaactgcagcttctggtgatt 28701115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 22802553 - 22802668
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||||| ||||  ||| |||| ||||||||||||| || ||  |||||||||||| | ||| | |||||||| ||||||||||||||||||||    
T  22802553 tttcaaaatagccattgctttacctttctagtcttctgcaatctttagacgagtttgaatccattaaatagcttttgaatctttaagttgcatctcctga 22802652  T
Q  125 tgaactgcagcttctg 140  Q
    |||||||||| |||||    
T  22802653 tgaactgcaggttctg 22802668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 30557261 - 30557175
Alignment:
Q  90 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||    ||||||| |||||||||||||||||||    
T  30557261 aaacaatttttgaagccttaagttgcatcctctgatgaactgcagcttctggtgatatttagcttctgatgaacttgcttctgatga 30557175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 25829337 - 25829425
Alignment:
Q  150 agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||  ||| ||||||||||||||||||| |||||||||||||| |||||||| |||| || || |||||||||||||||||||||    
T  25829337 agcttctggtgatcttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgctttaagcttc 25829425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 45087191 - 45087038
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatcct-tgaaacaactttt-gaagctttaagttgcatctcct 122  Q
    ||||||||||| ||||||   |||||||||||||||||||||  ||||  ||| ||||||||  | ||||||||||| ||||||||||||||||||  ||    
T  45087191 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccattaaacaactttttgaagctttaagttgcatcctct 45087092  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||| ||||||| |||||    ||||||| || ||||||||||| ||||    
T  45087091 gatgaactgtagcttctagtgatatttagcttctgataaacttgcttcttatga 45087038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 28140560 - 28140414
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    |||||| ||||||| |||||||  ||||||||| |||||||| ||||||||| |||      |||||| |||||||||||| ||||||||||| ||||||    
T  28140560 aacaacctttgaagttttaagtcttgcatctcccgatgaacttcagcttctgatgagat---gcttctgatgaacttgcttttgatgacgtcatcacttc 28140464  T
Q  189 aggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||| |||| ||| |||| || || |||||||||| | ||||||||    
T  28140463 aggagcacttttgacttcaggagcacttctcttcagacgttctaagcttc 28140414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 33074467 - 33074518
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  33074467 atgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 33074518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 40782712 - 40782791
Alignment:
Q  159 tgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttt-aggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||| |||| || || |||||||| |||| |||||||    
T  40782712 tgaacttgcttctgatgacgtcatcacttcaggagcactttgactttcaggagcacttctcttcagatgcttcaagcttc 40782791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 22317837 - 22317883
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  22317837 atgaacttgcttatgatgacgtcaccacttcaggagcactttgtctt 22317883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 30667224 - 30667310
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||||| |||  ||| || || |||||||| |||| |||||||    
T  30667224 gcttctgacgaacttgcttctgatgacgtcatcacttcaggagcactttgacttcgggagcacttctcttcagatgcttcaagcttc 30667310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 22802693 - 22802750
Alignment:
Q  152 cttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  22802693 cttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 22802750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 22260646 - 22260726
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagca-ctttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||| |||| || || ||||||||||| |||| ||||    
T  22260646 atgaacttgcttctgatgacgtcatcacttcaggagcatttttgtcttcaggagcacttctcttcagacgccttaaacttc 22260726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 24576128 - 24576251
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgag-tttgaatccttgaaacaacttttgaagctttaag--ttgcatctcc 121  Q
    |||||||||||  |||||   |||||||||||||||||||||| |||| |||| ||| ||||| |  |||||| ||||||||||||||  ||||||||||    
T  24576128 tttcaaaatagttgttgcttcacttttccagtcttctgcaatgcttagatgagatttaaatccattgaacaacctttgaagctttaagtattgcatctcc 24576227  T
Q  122 tgatgaactgcagcttctggtgat 145  Q
    | |||||||  |||||||||||||    
T  24576228 taatgaactttagcttctggtgat 24576251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 10009616 - 10009569
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  10009616 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 10009569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 14581685 - 14581728
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  14581685 gcttctgatgacgtcatcacttcaggagcactttgtctttagga 14581728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 22187967 - 22187920
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  22187967 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 22187920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 30557163 - 30557112
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  30557163 atgaacttgcttctgatgacgtcatcaattcaggagcactttgtcttcagga 30557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 20568732 - 20568635
Alignment:
Q  51 ttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||| ||||  ||| || ||||| || |||| | ||| |||||||||||  |||||||||||||||||| ||||||||||||||    
T  20568732 ttccagtcttctgcaatgcttagacgagattaaatccatggaacagcctttaaagctttaagtcttgcatctcctgatgaactacagcttctggtgat 20568635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 24850530 - 24850445
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||| |||||||  ||||||||||||| ||| ||| |||| || ||||||||||| |||| |||||||    
T  24850530 gcttctgatgaacttgcttctgacgacgtcattacttcaggagcac-ttgacttcaggagcacttttcttcagatgcttcaagcttc 24850445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 199
Target Start/End: Complemental strand, 23595546 - 23595404
Alignment:
Q  56 gtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaa--gttgcatctcctgatgaactgcagcttctggtgattcac-agc 152  Q
    ||||||||||||| |||||| | || |||||||  |||||| |||||||||||||   || ||||| ||||||| || |||||||||||||   ||  ||    
T  23595546 gtcttctgcaatgctaggtgtgattaaatcctttgaacaacctttgaagctttaattctttcatcttctgatgatcttcagcttctggtga---acttgc 23595450  T
Q  153 ttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||| ||| |  ||||||||||||||||| |||||||||||||||||    
T  23595449 ttctgatg-aggtgcttctgatgacgtcatcacttcaggagcacttt 23595404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 39037523 - 39037474
Alignment:
Q  149 cagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||| |||||||||||||||||||||||| |||||||| |||||||    
T  39037523 cagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactt 39037474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 1084150 - 1084238
Alignment:
Q  75 gagtttgaatccttgaaacaact-tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaa 162  Q
    |||||||||||||| ||||| || ||||||  |||| ||||||||| |||||||||| ||| ||||||||||  ||||||||| |||||    
T  1084150 gagtttgaatcctttaaacagctatttgaaagtttaggttgcatcttctgatgaactacagtttctggtgatatacagcttctgatgaa 1084238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 9015234 - 9015150
Alignment:
Q  153 ttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||  ||| | || || || |||||||| |||| |||||||    
T  9015234 ttctgatgaacttgcttctgatgacgtcatcacttcaggatcacttttacttcaagagcacttctcttcagatgcttcaagcttc 9015150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 13963985 - 13963811
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| || ||||||||| ||||| ||||  ||| || ||||| |  |||||| ||||||||||||| |  ||||||| ||    
T  13963985 tttcaaaatagtcgttgcttcactctttcagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaaatcttgcatctact 13963886  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||  ||||||| |||||    | ||||| | |||||||||||||||||||| | ||||||||||||||||    
T  13963885 gatgaactagagcttctagtgatctttaacttctgaggaacttgcttctgatgacgt-atcacttcaggagcactt 13963811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 24576283 - 24576355
Alignment:
Q  150 agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    ||||||| |||| ||||||||||||||||||| |||||||| ||||||||| ||| | ||||| || ||||||    
T  24576283 agcttctgatgaccttgcttctgatgacgtcatcacttcagaagcactttgacttcatgaacacttatcttca 24576355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 33074511 - 33074563
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||| |||| |||| |||||||||||||||| ||||||||||    
T  33074511 cttcaggagcactttatcttcaggagcaattttcttcagacgttttaagcttc 33074563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 18376812 - 18376741
Alignment:
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    ||||||| || |||||||||||   | |||||| |||||||| ||||||||||||||| |||||||||||||    
T  18376812 atgaacttcaacttctggtgatcttctgcttctgatgaacttacttctgatgacgtcatcacttcaggagca 18376741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 25829227 - 25829349
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||| | ||||||||| |||||  ||||||||||    
T  25829227 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacatcctttgaagctctaagtcttgcatctcct 25829326  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  |||||||||||||    
T  25829327 gatgaactttagcttctggtgat 25829349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 34321772 - 34321729
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||| |||||||||||||||||||||| ||||    
T  34321772 gcttctgatgacgtcatcacttcaggagcactttgtcttcagga 34321729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 194
Target Start/End: Original strand, 38781632 - 38781675
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagc 194  Q
    |||||| |||||||||||||||||||||||| ||||||||||||    
T  38781632 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagc 38781675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 22260520 - 22260621
Alignment:
Q  47 acttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtg 143  Q
    |||||||||||||||||||||| ||||  ||| || ||||| |  |||||||||||| ||||||||  |||||||||||||||| ||  | |||||||||    
T  22260520 acttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgacgctttaagtcttgcatctcctgatgagctttaacttctggtg 22260619  T
Q  144 at 145  Q
    ||    
T  22260620 at 22260621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 25037241 - 25037144
Alignment:
Q  51 ttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||| || |   || |||||||| |  |||||| |||||||||||||||  |||||||||||||||||| || |||||||||||    
T  25037241 ttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 25037144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 25041348 - 25041251
Alignment:
Q  51 ttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||| || |   || |||||||| |  |||||| |||||||||||||||  |||||||||||||||||| || |||||||||||    
T  25041348 ttccagtcttctgcaatgcttcgacaagattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 25041251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 28701078 - 28701036
Alignment:
Q  167 cttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||| ||||||||||||||||||||||||||| ||||    
T  28701078 cttctgatgatgtcaccacttcaggagcactttgtcttcagga 28701036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 45087021 - 45086975
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||| |||||||||||||| |||||||||||||||||||||| ||||    
T  45087021 cttgtttctgatgacgtcatcacttcaggagcactttgtcttcagga 45086975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 10009682 - 10009634
Alignment:
Q  99 ttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    ||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  10009682 ttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 10009634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 22317760 - 22317840
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||||||||||  |||||||| ||||||| |  ||||||||||||||  |||||||| ||| |||||||| ||||||    
T  22317760 tttgaagctttaagtcttgcatctcttgatgaaatagagcttctggtgattttcagcttctgatgtacttgcttatgatga 22317840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 28701043 - 28700991
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  28701043 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 28700991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 20568615 - 20568528
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||  ||||||||| ||| ||| |||||| |||||||| |||| || || ||||||||||  |||||||||    
T  20568615 gcttctgatgaacttgcttcaaatgacgtcatcacctcatgagcacttttgtcttcaggagcacttatcttcagacgtcttaagcttc 20568528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 35743861 - 35743810
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||| ||| ||||| | |||||||||||||| ||||    
T  35743861 atgaacttgcttctgatgacatcatcactttaagagcactttgtcttcagga 35743810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 23184181 - 23184147
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||||||||||||||| |||||||||||||||||    
T  23184181 tgcttctgatgacgtcatcacttcaggagcacttt 23184147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 30621437 - 30621471
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttg 200  Q
    |||||||||||||||| ||||||||||||||||||    
T  30621437 gcttctgatgacgtcatcacttcaggagcactttg 30621471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 200
Target Start/End: Original strand, 30624058 - 30624092
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttg 200  Q
    |||||||||||||||| ||||||||||||||||||    
T  30624058 gcttctgatgacgtcatcacttcaggagcactttg 30624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 30667082 - 30667199
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   | | |||||||||||||||||| ||||  ||| || ||||| |  |||||| ||||||||||||| |  ||||||||||    
T  30667082 tttcaaaatagtcgttgcttcattcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaattcttgcatctcct 30667181  T
Q  123 gatgaactgcagcttctg 140  Q
    |||||||| || ||||||    
T  30667182 gatgaactacaacttctg 30667199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 38631184 - 38631218
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||||||||||||||| |||||||||||||||||    
T  38631184 tgcttctgatgacgtcatcacttcaggagcacttt 38631218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 7609129 - 7609177
Alignment:
Q  99 ttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    ||||||||||||||  ||||||||||||||||||  |||||||||||||    
T  7609129 ttgaagctttaagtcttgcatctcctgatgaactttagcttctggtgat 7609177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 21537189 - 21537133
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| |||||||||||||||  |||||||||||||||||| || ||||| |||||    
T  21537189 aacaacctttgaagctttaagtcttgcatctcctgatgaacttcatcttctagtgat 21537133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 44881398 - 44881431
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||| ||||||||||||||||    
T  44881398 tgcttctgatgacgtcagcacttcaggagcactt 44881431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 11388623 - 11388563
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| | ||||||||||| |||  ||| |||| || |||||||||||    
T  11388623 ttgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 11388563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 11394969 - 11394909
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| | ||||||||||| |||  ||| |||| || |||||||||||    
T  11394969 ttgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 11394909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 11405285 - 11405225
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| | ||||||||||| |||  ||| |||| || |||||||||||    
T  11405285 ttgcttctgatgacgtcatctcttcaggagcagtttagcttcaggagcagttttcttcaga 11405225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 20070694 - 20070630
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  20070694 tgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcagatgctt 20070630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 22317881 - 22317933
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||| ||| |||| || || |||||||||||||||||||||    
T  22317881 cttcagtagcactttgacttcaggagcagttctcttcagacgctttaagcttc 22317933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 24850601 - 24850550
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||  |||||||||||||| ||| |||| |||||||||    
T  24850601 cttttgaagctttaagtcttgcatctcctgatgtacttcagcatctggtgat 24850550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 34321736 - 34321684
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||| ||||    
T  34321736 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaaacttc 34321684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 36251675 - 36251615
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| |||||||| |||||||   ||| |||| || |||||||||||    
T  36251675 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 36251615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 28464415 - 28464207
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||||||  ||||||||||||| ||||  |||||||||||||||||||| |||||    
T  28464415 ctttgaagaataagcatccaatgcctttcaaaatagccgttgttatacttttttagtcttctgcaatcttagacgagtttgaatccttgaaacagctttt 28464316  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||    
T  28464315 gaagctttaagttgtatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttctgatgacgtcatcacttcaggagcactttg 28464216  T
Q  201 tctttagga 209  Q
    |||| ||||    
T  28464215 tcttcagga 28464207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 10848834 - 10849043
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||| ||||| |||||||||||| | ||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||||    
T  10848834 ctttgaagaataagcatctaatgcctttcaaaatagctgatgccatacttttccagttttctgcaatttttaggcgagtttgaatccttgaaacaacttt 10848933  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||||||| |||||| |||| |||||||||||||||||    
T  10848934 tgaagctttaagttgcatctcatgatgaactgcagcttctggtgatacacagcttatgatgaacttgcttttgatgatgtcatcacttcaggagcacttt 10849033  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  10849034 gtcttcagga 10849043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 4887117 - 4887329
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtga-gtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||| |  | |||| ||||| |  ||||||||||||||||||||||||||| || |||    
T  4887117 tttcaaaatagtcgttgctatacttttccagtcttttgcaatcttaagacaagtttaaatccattgaacaacttttgaagctttaagttgcatatcttga 4887216  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  4887217 tgaactgcagcttctggtgattctcagcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactttatctttaggaacagttttcttcaga 4887316  T
Q  225 cgctttaagcttc 237  Q
    |||||||||||||    
T  4887317 cgctttaagcttc 4887329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 3245483 - 3245305
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  3245483 tttcaaaatagccgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaacagttttggaagctttaagttgcatctcctgat 3245384  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| || |||||||||||||    
T  3245383 gaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatgacgtcatcactttagaagcactttgtctt 3245305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 35986307 - 35986132
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||| || ||||||||||| |||||    
T  35986307 ctttgaagaataggcatccaatgcatttcaaaatagtcgttgccacacttttccagtcttctgcaattttaggcgagttagagtccttgaaacatctttt 35986208  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| |||||||||  |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  35986207 gaaactttaagttcaatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatga 35986132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 35932082 - 35931872
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | |||| ||||| || ||||||||||||||||    
T  35932082 ctttgaagaataagcatccaatgcgtttcaaaatagtcgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttt 35931983  T
Q  100 tg-aagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    || || ||||||||| || ||| |||||||||| | ||||||||||| |||| ||||| ||||||| |||||||||||||||| |||||||| |||||||    
T  35931982 tgaaaactttaagttccacctcttgatgaactgtaccttctggtgatacacaacttctgatgaactagcttctgatgacgtcatcacttcagaagcactt 35931883  T
Q  199 tgtctttagga 209  Q
    |||||| ||||    
T  35931882 tgtcttcagga 35931872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 30115857 - 30115705
Alignment:
Q  86 cttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccac 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||    
T  30115857 cttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctaatgacgtcatcac 30115758  T
Q  186 ttcaggagcactt-tgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||    ||| |||| || ||||||||||||||||||||||||    
T  30115757 ttcaggagcacttcaaacttcaggagcagttttcttcagacgctttaagcttc 30115705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 15517067 - 15517248
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||  |||||||||||| |  ||||||||||||||||||||||||||||| |||||||    
T  15517067 caaaatagccgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttgaacaacttttgaagctttaagttgcatcttctgatga 15517166  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||| || ||||||||||||| || ||||| || |||||||||||||||| |||| ||||||||||||||||| |||| ||||    
T  15517167 actacaacttctggtgattctcaacttctgataaacttgcttctgatgatgtcatcacttcaggagcactttatcttcagga 15517248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 33022759 - 33022971
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   |||||||||||||||||||||| |||| |||| || ||||| |  |||| | |||||||||||| ||||||||||||||    
T  33022759 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccattgaacagcctttgaagctttatgttgcatctcctga 33022858  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||  |||||||||||  |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| |||| || |||| ||||||    
T  33022859 tgaactgcaaattctggtgattttcagcttctgatgaacttgcttctgatgacgtcaccacttcaaaagcactttgtcttcaggagcagtttttttcaga 33022958  T
Q  225 cgctttaagcttc 237  Q
    || ||||||||||    
T  33022959 cgttttaagcttc 33022971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 5430044 - 5430191
Alignment:
Q  90 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttca 189  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||   | ||||| ||||||||||||||||||||||||||||||||    
T  5430044 aaacagcttttgaagccttaagttgcatctcctgatgaactgcagcttctggtgatttttaccttctgatgaacttgcttctgatgacgtcaccacttca 5430143  T
Q  190 ggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    | ||||||||||||| |||| || |||||||| |||||||||||||||    
T  5430144 gaagcactttgtcttcaggagcacttttcttcggacgctttaagcttc 5430191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 9089030 - 9089190
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    ||||||||||| |||||||||||| || |||||||| |||||  |||||||||||||||||| ||||  |||  |||||||| ||||| ||||| |||||    
T  9089030 ctttgaagaattagcatccaatgccttccaaaatagtcgttgtaatacttttccagtcttcttcaatcatagacgagtttgattcctttaaacagctttt 9089129  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatga 161  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9089130 gaaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 9089190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 25930232 - 25930076
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||| |||||||||||||||| ||  ||| |||||||||  |||||||||||||||| |||||| || ||  |||||||||||||| ||||||||||    
T  25930232 ctttgaaaaataagcatccaatgccttctaaattagccgttgttatacttttccagtcttatgcaatctttagacgagtttgaatcctttaaacaacttt 25930133  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttct 156  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25930132 tgaagctttaagttgcatctcctgatgaattgcagcttctggtgattcacagcttct 25930076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 27 - 237
Target Start/End: Complemental strand, 14086579 - 14086367
Alignment:
Q  27 ttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatcct-tgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||||||||   |||||||||||||||||||||  ||||  ||| ||||||||  | ||||| |||||||||| ||||||||||||  ||||    
T  14086579 ttcaaaatagccgttgcttcacttttccagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctga 14086480  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| |||   ||||| | || ||||||||||||||||| ||| |||||||||||||||||||||| |||| || ||||||||| |    
T  14086479 tgaactgcagcttctggtaatttttagcttttgataaacttgcttctgatgacatcatcacttcaggagcactttgtcttcaggagcagttttcttcata 14086380  T
Q  225 cgctttaagcttc 237  Q
    |||||||||||||    
T  14086379 cgctttaagcttc 14086367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 31117972 - 31118183
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaac-ttttgaagctttaagttgcatctcctg 123  Q
    ||||||| ||| ||||||   |||||||||||||||||||||| ||||  |||||| ||||| | ||||||| ||||||||||||| |||||||||||||    
T  31117972 tttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagacgagtttaaatccgttaaacaaccttttgaagctttatgttgcatctcctg 31118071  T
Q  124 atgaactgcagcttctggtgattcac-agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    ||||||||||||||||| |||   ||  ||||||| || |||||||| |||||||||||||||||||||||||||||||||| | ||  | |||||||||    
T  31118072 atgaactgcagcttctgatga---acttgcttctagtggacttgcttatgatgacgtcaccacttcaggagcactttgtcttcatgagtagttttcttca 31118168  T
Q  223 gacgctttaagcttc 237  Q
    |||||||||||||||    
T  31118169 gacgctttaagcttc 31118183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 26759247 - 26759395
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||  ||||||||||||||||||||||| || ||| || ||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  26759247 caaaatagtcgttgttatacttttccagtcttctgcaatctttaggcgaatttgaatccgttaaacaacttttgaagctttaagttgcatctcctgatga 26759346  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| || ||||||||||||| |||||||| || || |||||||||||||    
T  26759347 actacaacttctggtgattctcagcttctgataaatttgcttctgatga 26759395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 237
Target Start/End: Complemental strand, 29138445 - 29138223
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 128  Q
    ||||||||  ||||| ||||||| ||||||||||||||| ||||  || ||||||||  | ||||| |||||||| ||||||||||||||||||||||||    
T  29138445 caaaatagttgttgctatacttt-ccagtcttctgcaatcttagacgattttgaatctgttaaacagcttttgaaactttaagttgcatctcctgatgaa 29138347  T
Q  129 ctgcagcttctggtgattcacagcttctaatgaacttgcttctg---------------atgacgtcaccacttcaggagcactttgtctttaggaacaa 213  Q
    || || ||||||||||||| |||||||| || ||||||||||||               ||||||||| |||| ||||||||||||||||| |||||||     
T  29138346 ctacaacttctggtgattctcagcttctgataaacttgcttctgatgaacttgcttctgatgacgtcatcactacaggagcactttgtcttcaggaacag 29138247  T
Q  214 ttttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||||||||    
T  29138246 ttttcttcagacgctttaagcttc 29138223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 11993984 - 11994134
Alignment:
Q  27 ttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    |||||| ||||||||||   ||| |||||||||||||||||  ||||  |||||||||||| |  |||| |||||||| |||||||||||||||||||||    
T  11993984 ttcaaattagccgttgcttcactattccagtcttctgcaatccttagacgagtttgaatccgttgaacatcttttgaaactttaagttgcatctcctgat 11994083  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  11994084 gaactacagcttctggtgattcacagcttctgataaacttgcttctgatga 11994134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 41566476 - 41566262
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||||||| |||||||||||||| ||||  ||| || ||||| |  || | |||||||||||||||||  ||||||||||    
T  41566476 tttcaaaatagacgttgcttcacttttctagtcttctgcaatgcttagacgagattaaatccattgaatagcttttgaagctttaagtcttgcatctcct 41566377  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    |||||||| || |||||| ||||   |||||||| ||||||||||||||||||||| || |||||||||| ||||||||||| |||| || || ||||||    
T  41566376 gatgaactacaacttctgatgatcttcagcttctgatgaacttgcttctgatgacgacatcacttcaggaacactttgtcttcaggagcagttctcttca 41566277  T
Q  223 gacgctttaagcttc 237  Q
    |||| ||||| ||||    
T  41566276 gacgttttaaccttc 41566262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 42243776 - 42243928
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||   ||||||||||||||||||||| || ||  |||||||||||| | ||||| |||||||||||||||||||||||||||||    
T  42243776 tttcaaaatagttgttgcttcacttttccagtcttctgcaatttttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctga 42243875  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    |||||| |||||||||||||||| ||| || | || || ||||||||||||||    
T  42243876 tgaactacagcttctggtgattctcagtttttgataaatttgcttctgatgac 42243928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 30743099 - 30743226
Alignment:
Q  50 tttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattca 148  Q
    |||||||||||||||||| || ||  |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||     
T  30743099 tttccagtcttctgcaatctttagacgagtttgaatccattaaacaacttttgaagctttaagttgcatctcctgatgaactgcaacttctcgtaattct 30743198  T
Q  149 cagcttctaatgaacttgcttctgatga 176  Q
    |||||| | || || |||||||||||||    
T  30743199 cagcttatgataaatttgcttctgatga 30743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 26784538 - 26784664
Alignment:
Q  112 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaa 210  Q
    |||||||||||| |||||| ||||||||||||||   |||||||| ||||||||||||||||||||||||  |||||| |||||| |||||||| ||||     
T  26784538 ttgcatctcctgctgaactacagcttctggtgatcttcagcttctgatgaacttgcttctgatgacgtcatgacttcatgagcacttttgtcttcaggag 26784637  T
Q  211 caattttcttcagacgctttaagcttc 237  Q
    || || |||||||||||||||||||||    
T  26784638 cacttctcttcagacgctttaagcttc 26784664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 209
Target Start/End: Complemental strand, 23391677 - 23391472
Alignment:
Q  3 ttgaagaataagcatccaatgcattt-caaaatagccgttgccatacttttccagtcttctgcaatgtta--ggtgagtttgaatccttgaaacaacttt 99  Q
    |||| ||||||||||||||||| ||| ||||||||||||||  | |||||   ||||||||||||| ||   || ||| |||||||||||||||| ||||    
T  23391677 ttgaggaataagcatccaatgctttttcaaaatagccgttgtta-actttcaaagtcttctgcaatttttctggcgagcttgaatccttgaaacagcttt 23391579  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcaca-gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||| |||| ||||  |||||| ||||||||||||||||   ||  |||| | |||||||||||||||||||||||| |||||||| |||||||    
T  23391578 tgaagctttaggttg-atcttttgatgatctgcagcttctggtga---acttgcttatgatgaacttgcttctgatgacgtcatcacttcagaagcactt 23391483  T
Q  199 tgtctttagga 209  Q
    |||||| ||||    
T  23391482 tgtcttcagga 23391472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 21660273 - 21660449
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaat-gttaggtgagtttgaatccttgaaacaacttt 99  Q
    |||||| || |||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||  ||||  ||||| || ||||||||||| ||||    
T  21660273 ctttgaggactaagcatccaatgcatttgaaaatagttgttgccatacttttccggtcttctgcaatctttagacgagttagagtccttgaaacagcttt 21660372  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||| |||| ||||  || |||  |||||||| ||||||||||||| || | ||||| |||| || |||||||||||    
T  21660373 tgaaactttgagttcaatttccaaatgaactgtagcttctggtgatacataacttctgatgacctagcttctgatga 21660449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 23412950 - 23412843
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    |||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||     |||||| |||||||||||||||||||||||| ||||||    
T  23412950 aacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttc 23412853  T
Q  189 aggagcactt 198  Q
    ||||||||||    
T  23412852 aggagcactt 23412843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 20551061 - 20551162
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggag 193  Q
    |||||||||||||||||  |||||||||||||||||| ||||||||| |||      ||||||||||| ||||||||||||||||||| |||||||||||    
T  20551061 cttttgaagctttaagtcttgcatctcctgatgaacttcagcttctgatgagat---gcttctaatgagcttgcttctgatgacgtcatcacttcaggag 20551157  T
Q  194 cactt 198  Q
    |||||    
T  20551158 cactt 20551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 33933438 - 33933517
Alignment:
Q  97 ttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||||||||||||||||  ||||||||||||| ||| ||||||||| |||||||| || ||||||||||||||||    
T  33933438 ttttgaagctttaagttgcatcctctgatgaactgcaacttatggtgattctcagcttctgataaacttgcttctgatga 33933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 28139809 - 28139894
Alignment:
Q  152 cttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||| ||| |||| |||| || ||||||||||| ||||||||||||    
T  28139809 cttctgatgaacttggttctgatgacgtcatcacttcaggagcagtttatcttcaggagcagttttcttcagatgctttaagcttc 28139894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 6512473 - 6512306
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| ||||||||||| |||||| ||||  ||| || |||||    |||||| |||||||||||||||  ||||||||||    
T  6512473 tttcaaaatagtcgttgcttcactcttccagtcttcagcaatgcttagacgagattaaatccactgaacaacctttgaagctttaagtcttgcatctcct 6512374  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcagga 192  Q
    |||||||| || ||||| |||||     |||||| |||||||||||||||||||||||| ||||||||||    
T  6512373 gatgaactacaacttctagtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcagga 6512306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 642608 - 642523
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||| ||| ||| |||| || |||||||||||||||| |||||||    
T  642608 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcac-ttgacttcaggatcacttttcttcagacgcttcaagcttc 642523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 32160911 - 32161013
Alignment:
Q  75 gagtttgaatccttgaaacaact-tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctga 173  Q
    |||||||||||| | |||||||| |||||| ||||| ||||||||| |||||||||| ||| ||||||||||  ||||||||| ||  ||||||||||||    
T  32160911 gagtttgaatccattaaacaactatttgaaactttaggttgcatcttctgatgaactacagtttctggtgatatacagcttctgatagacttgcttctga 32161010  T
Q  174 tga 176  Q
    |||    
T  32161011 tga 32161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 21072217 - 21072110
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    |||||| ||| |||||||||||  |||||||||||||||||| ||||||||||||||   |||||||| ||| |  ||||||||||||| ||| ||||||    
T  21072217 aacaaccttttaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagcttctgatg-agatgcttctgatgacctcatcacttc 21072119  T
Q  189 aggagcact 197  Q
    |||||||||    
T  21072118 aggagcact 21072110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 33933523 - 33933588
Alignment:
Q  152 cttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaatttt 217  Q
    ||||| |||||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||    
T  33933523 cttctgatgaacttgcttctgatgacgttatcacttgaggagcactttgtctttaggaacactttt 33933588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 21910761 - 21910849
Alignment:
Q  150 agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||  ||| ||||||||||||||||||| ||||||| |||||| |||||||| |||| || || |||||||||||||||||||||    
T  21910761 agcttctggtgatcttgcttctgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttc 21910849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 17815203 - 17815290
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||| |||||||||||| |||||||||||||| |||||||| |||| || || |||||||| | ||||||||||    
T  17815203 gcttctgatgaacttgctactgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagatgttttaagcttc 17815290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 23478535 - 23478596
Alignment:
Q  111 gttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctg 172  Q
    ||||||||| ||||||||||| |||||||||||||  ||||||||| |||||||||||||||    
T  23478535 gttgcatcttctgatgaactgtagcttctggtgatatacagcttctgatgaacttgcttctg 23478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 21099598 - 21099523
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagc 234  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||| | || || |||||||||||||||| ||||    
T  21099598 atgaacttgcttctgatgacgtcatcacttcaggagcac-ttgacttcatgagcacttttcttcagacgcttcaagc 21099523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 25096709 - 25096661
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  25096709 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 25096661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 25154679 - 25154631
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  25154679 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 25154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 19536202 - 19536152
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgt 201  Q
    |||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  19536202 gcttctgatgaacttacttctgatgacgtcatcacttcaggagcactttgt 19536152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 89398 - 89342
Alignment:
Q  91 aacaacttttgaagctttaagtt--gcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||||||||  ||||||||||||||||| || |||||||||||    
T  89398 aacaacttttgaagctttaagttttgcatctcctgatgaactacaacttctggtgat 89342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 198
Target Start/End: Complemental strand, 9398695 - 9398612
Alignment:
Q  115 catctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||| |||||||||| || |||||||||||    ||||||| ||||||||| |  ||||||||||| ||||||||||||||||    
T  9398695 catcttctgatgaacttcaacttctggtgatcttgagcttctgatgaacttgatgttgatgacgtcatcacttcaggagcactt 9398612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 89341 - 89267
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||| |||||||| ||||||||| ||| || | || || ||||||||| ||| |||||||    
T  89341 cttgcttctgatgacgtcatcacttcagtagcactttgacttcagaagcacttctcttcagacacttcaagcttc 89267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 26759400 - 26759458
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| |||| ||||| ||||||||||||| || ||||||||||||||||||| ||||    
T  26759400 gcttctgatgaccttgcctctgatgacgtcatcagttcaggagcactttgtcttcagga 26759458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 195
Target Start/End: Complemental strand, 21198990 - 21198877
Alignment:
Q  82 aatccttgaaacaacttttgaagctttaagttgc--atctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgt 179  Q
    |||||||  |||||| |||||||||||||||  |  |||| |||||||||| ||||| ||||||||  |  |||||| ||||  ||||||||||||||||    
T  21198990 aatcctttgaacaacctttgaagctttaagtctctcatcttctgatgaacttcagctcctggtgat--attgcttctgatgagtttgcttctgatgacgt 21198893  T
Q  180 caccacttcaggagca 195  Q
    || | |||||||||||    
T  21198892 catcgcttcaggagca 21198877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 7745580 - 7745532
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||| ||||||||||||||||||  |||||||||||||||||    
T  7745580 gcttcttatgaccttgcttctgatgacgtcgtcacttcaggagcacttt 7745532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 26759451 - 26759503
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  26759451 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 26759503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 26765596 - 26765674
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaat-gttaggtgagtttgaatccttgaaacaacttttgaagctt 107  Q
    ||||||||  ||||| |||||||||||||||||||||||  ||||| || |||||||| || ||||| ||||||||||||    
T  26765596 caaaatagttgttgctatacttttccagtcttctgcaatctttaggcgaatttgaatcgtt-aaacagcttttgaagctt 26765674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 39362228 - 39362169
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||| |||||||| ||||||||  ||| |||| || |||||||||||    
T  39362228 tgcttctgatgacgtcatcacttcagaagcactttagcttcaggagcagttttcttcaga 39362169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 23881303 - 23881388
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||| |||||||||||||| |||| |||||||||||||  | | ||| | || || |||||||||||||||| |||||||    
T  23881303 gcttctgatgaccttgcttctgatgatgtcatcacttcaggagca-gtagacttcaagagcacttttcttcagacgcttcaagcttc 23881388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 30743231 - 30743281
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgt 201  Q
    |||||| |||| ||| ||| ||||||||||| |||||||||||||||||||    
T  30743231 gcttctgatgaccttacttttgatgacgtcatcacttcaggagcactttgt 30743281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 7745530 - 7745477
Alignment:
Q  184 acttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||| || |||||||| || || ||||||||||||| |||||||    
T  7745530 acttcaggagcactatgactttaggagcacttctcttcagacgcttcaagcttc 7745477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 20797610 - 20797577
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||| ||||||||||||||||    
T  20797610 tgcttctgatgacgtcatcacttcaggagcactt 20797577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 21660453 - 21660498
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||    
T  21660453 ttgcttctgatgacgtcatcacttcagatgcactttgtcttcagga 21660498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 5301480 - 5301540
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| |||||||| |||||||   ||| |||| || |||||||||||    
T  5301480 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 5301540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 12352711 - 12352671
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||||| |||||||||||  |||||||||||||||    
T  12352711 atgaacttgcttttgatgacgtcagtacttcaggagcactt 12352671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 27203725 - 27203665
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| |||||||| |||||||   ||| |||| || |||||||||||    
T  27203725 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 27203665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 34771826 - 34771762
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  34771826 tgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcagatgctt 34771762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 34782771 - 34782707
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  34782771 tgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcagatgctt 34782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 42243935 - 42243975
Alignment:
Q  169 tctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||| ||||||||||||| |||||||| ||||    
T  42243935 tctgatgacgtcatcacttcaggagcattttgtcttcagga 42243975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 19066102 - 19065893
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||| || ||||||||||| ||||    
T  19066102 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacagcttt 19066003  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||||||||| | |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  19066002 tgaagctttaagatccatctcctgatgaactgcagcttctggtgatatacagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcacttt 19065903  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  19065902 gtcttcagga 19065893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 33351977 - 33351767
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    ||||||||||||| |||| ||||||||||||||||||||| | ||||  |||| ||||||||||||||| ||||||| |||||||||||||||||| |||    
T  33351977 tttcaaaatagcc-ttgctatacttttccagtcttctgcactcttagacgagtgtgaatccttgaaacagcttttgaggctttaagttgcatctcccgat 33351879  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagac 225  Q
    ||| ||||| ||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||| |||| || ||||||||||||    
T  33351878 gaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatgacatcatcacttcaagagcactttgtcttcaggagcagttttcttcagac 33351779  T
Q  226 gctttaagcttc 237  Q
    ||||||||||||    
T  33351778 gctttaagcttc 33351767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 49 - 237
Target Start/End: Original strand, 15954825 - 15955014
Alignment:
Q  49 ttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattc 147  Q
    ||||||||||||||||||| || ||  |||||||||||| | ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  15954825 ttttccagtcttctgcaatctttagaagagtttgaatccgttaaacagcttttgaagctttaagttgcatctcttgatgaactacagcttctggtaattc 15954924  T
Q  148 acagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
     |||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||    
T  15954925 tcagcttctgataaacttgcttctgatgacgtcaccacttcaggagcactttgtcttaaggagcagtttttttcagacgctttaagcttc 15955014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 91 - 237
Target Start/End: Original strand, 21235278 - 21235424
Alignment:
Q  91 aacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcag 190  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||| | |||||||    
T  21235278 aacaacctttaaagctttatgttgcatctcctgatgaactgcagcttctagtgattttcagcttctgatgaacttgcttctgatgacgtcgctacttcag 21235377  T
Q  191 gagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||| |||| || ||||||||||||||||||||||||    
T  21235378 gagcactttgtcttcaggagcagttttcttcagacgctttaagcttc 21235424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 47 - 231
Target Start/End: Complemental strand, 16265179 - 16264994
Alignment:
Q  47 acttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||| | ||||||| |||| |||| || ||||| |  |||||| ||| |||||||| |||||||||| ||| ||||||||||||||||||||    
T  16265179 acttttccagtcctgtgcaatgcttagatgagattaaatccattgaacaacctttcaagctttatgttgcatctcttgacgaactgcagcttctggtgat 16265080  T
Q  146 tcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgcttta 231  Q
    |  |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||||||||| ||||||    
T  16265079 tttcagcttctgatgaacttgcttctgatgacgtcgccacttcaggagcactttgtcttcaggagcagttttcttcagatgcttta 16264994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 20730754 - 20730542
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   |||||||||||||||||||||  |||| |||| || ||||| |  |||| | |||||||||||  ||| ||||||||||    
T  20730754 tttcaaactagtcgttgcttcacttttccagtcttctgcaatacttagatgagattaaatcccttgaacagcctttgaagctttttgttacatctcctga 20730655  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||| ||||||  |||||| | ||||||||||||||||||||||||| ||||||||||||||||||||| | || || |||||||||||    
T  20730654 tgaactgcagcttctagtgattttcagcttatgatgaacttgcttctgatgacgtcactacttcaggagcactttgtcttcatgagcagttttcttcaga 20730555  T
Q  225 cgctttaagcttc 237  Q
    ||||| |||||||    
T  20730554 cgcttaaagcttc 20730542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 22076454 - 22076305
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| ||||||||| ||||||||||||| || ||  |||||| ||||||| ||||| ||||| ||||||||||||||||||||||||||    
T  22076454 caaaatagtcgttgctatacttttcgagtcttctgcaatctttagacgagtttaaatcctttaaacagcttttaaagctttaagttgcatctcctgatga 22076355  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    ||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  22076354 actacatcttctggtgattcacagcttctgatgaacttgcttctgatgac 22076305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 16877340 - 16877484
Alignment:
Q  54 cagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagc 152  Q
    |||||||||||||| || ||  |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||    
T  16877340 cagtcttctgcaatctttagacgagtttgaatccattaaacaacttttgaagctttaagttgcatctcctgatgaactacaacttttggtgattcacagc 16877439  T
Q  153 ttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||| ||||||||||||||||||||||||  ||||||| ||||||    
T  16877440 ttctgatgaacttgcttctgatgacgtcattacttcagaagcact 16877484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 12349092 - 12349211
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  12349092 tttcaaaatagtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaacagcttttgaagctctaagttgcatctcctgat 12349191  T
Q  126 gaactgcagcttctggtgat 145  Q
    ||||||||||||||| ||||    
T  12349192 gaactgcagcttctgatgat 12349211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 91 - 237
Target Start/End: Original strand, 22802306 - 22802452
Alignment:
Q  91 aacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcag 190  Q
    |||||| |||||||||||| |||||||||||||||||||| || ||||||||||||  |||||||| |||||||||||||| |||||||||| |||||||    
T  22802306 aacaacctttgaagctttatgttgcatctcctgatgaactacaacttctggtgattttcagcttctgatgaacttgcttctaatgacgtcactacttcag 22802405  T
Q  191 gagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||| |||| || |||  |||||||| ||||||||||    
T  22802406 gagcactttgtcttcaggagcagtttatttcagacgttttaagcttc 22802452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 21618346 - 21618494
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| ||||||  ||||||||||||||||| |||| || ||  |||||||||||| | |||||||||||||||||||||||||||||| |||||||    
T  21618346 caaaatagtcgttgctttacttttccagtcttctacaatctttagaagagtttgaatccgttaaacaacttttgaagctttaagttgcatcttctgatga 21618445  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| |||||||||||||||| |||||||| || ||||||||||||||||    
T  21618446 actacagcttctggtgattctcagcttctgataaacttgcttctgatga 21618494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 16336229 - 16336366
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| |||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  16336229 caaaatagtcgttgctatacttttccagtcttctgcaatgtttagacgagtttgaatcctttaaacaacttttgaagcttcaagttgcatctcctgatga 16336328  T
Q  128 actgcagcttctggtgattcacagcttctaatgaactt 165  Q
     || || ||||||||||||| |||||||| || |||||    
T  16336329 tctacaacttctggtgattctcagcttctgataaactt 16336366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 26 - 204
Target Start/End: Original strand, 32544364 - 32544545
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  32544364 tttcaaaatagacgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 32544463  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||  ||||| ||||||||  |||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||    
T  32544464 gatgaactagagcttatggtgattttcagcttctgatgaacttgcatctgatgacatcaccacttcaggagcactttgtctt 32544545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 177
Target Start/End: Original strand, 26589679 - 26589844
Alignment:
Q  13 agcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttttgaagctttaag 111  Q
    |||||||||||||||||||| |||| ||||||| ||| ||| ||||||||| ||| | |||| ||||| || || |||||||||||||||||   || ||    
T  26589679 agcatccaatgcatttcaaactagctgttgccacactcttctagtcttctgtaatttctaggcgagttagagtcattgaaacaacttttgaaaacttgag 26589778  T
Q  112 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    || |||||| |||||||||||||||||||||||| || ||||||  ||||||||||||||||||||    
T  26589779 ttccatctcttgatgaactgcagcttctggtgatacatagcttcagatgaacttgcttctgatgac 26589844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 169
Target Start/End: Complemental strand, 19833082 - 19832938
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   ||||||||||||||||||||| || || ||||||||||||| | ||||| ||||| |||||||||||||||||||||||    
T  19833082 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagatgagtttgaatccgttaaacagcttttaaagctttaagttgcatctcctga 19832983  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgctt 169  Q
    |||||| || ||||||||||||| |||||||| || | |||||||    
T  19832982 tgaactacatcttctggtgattctcagcttctgataatcttgctt 19832938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 29918116 - 29918328
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||| ||| ||||||   ||||||||| |||||||||||| ||||  ||| || ||||| |||| |||| |||||||||||||||  ||||||||||    
T  29918116 tttcaaactagtcgttgcttcacttttccaatcttctgcaatgcttagacgagattaaatccatgaa-caacctttgaagctttaagtcttgcatctcct 29918214  T
Q  123 gatgaactgcagcttctggtgattcaca-gcttctaatgaacttgcttctgatgacgtcaccactt-caggagcactttgtctttaggaacaattttctt 220  Q
    |||||||| ||||||||| |||   ||  |||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||| || | || |||||||    
T  29918215 gatgaactacagcttctgatga---acttgcttctgatggacttgcttctaatgacgtcaccactttcaggagcactttgtcttcagaagcagttttctt 29918311  T
Q  221 cagacgctttaagcttc 237  Q
    || ||||||||||||||    
T  29918312 catacgctttaagcttc 29918328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 19086228 - 19086432
Alignment:
Q  6 aagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatcc-ttgaaacaacttttgaa 103  Q
    ||||| ||||||||||||| ||||||||||| ||||||   ||| | |||||||||||||||  ||||  ||| || ||||| ||||| || |  ||||     
T  19086228 aagaacaagcatccaatgc-tttcaaaatagtcgttgcttcactctcccagtcttctgcaatacttagacgagattaaatccattgaatcagcccttga- 19086325  T
Q  104 gctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgt 201  Q
    |||||||||  |||||||||||||||||| ||||||||||||||   ||||| || |||||||||||||||||||||||| ||||||||||||||||||     
T  19086326 gctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttcagct-ctgatgaacttgcttctgatgacgtcatcacttcaggagcactttga 19086424  T
Q  202 ctttagga 209  Q
    ||| ||||    
T  19086425 cttcagga 19086432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 17608300 - 17608189
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||| ||| | ||||||||| ||||||||||  |||||||||||||  ||||||||| |||||||||||||||||||||||| ||||||||  |||||    
T  17608300 tttgaaacttcaggttgcatcttctgatgaactatagcttctggtgatatacagcttctgatgaacttgcttctgatgacgtcatcacttcagaggcact 17608201  T
Q  198 ttgtctttagga 209  Q
    ||||||| ||||    
T  17608200 ttgtcttcagga 17608189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 17316607 - 17316467
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta-ggtgagtttgaatccttgaaacaacttttg 101  Q
    |||| |||||||||||| |||| |||||||||||||| ||  | ||||| | ||||||||||||| ||  || ||| |||||||||||||||||||||||    
T  17316607 ttgaggaataagcatccgatgcttttcaaaatagccgctgtta-actttccaagtcttctgcaattttttggcgagcttgaatccttgaaacaacttttg 17316509  T
Q  102 aagctttaagttgcatctcctgatgaactgcagcttctggtga 144  Q
    |||||||| |||| |||| ||||||| ||||||||||||||||    
T  17316508 aagctttaggttg-atcttctgatgatctgcagcttctggtga 17316467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 237
Target Start/End: Complemental strand, 34451645 - 34451506
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    |||||| ||||||||  ||||||||||||||||||  |||||||||||||   || |||||||||||||||||||||||||||||| |||||||| ||||    
T  34451645 tttgaatctttaagtcttgcatctcctgatgaactagagcttctggtgat---caacttctaatgaacttgcttctgatgacgtcatcacttcagaagca 34451549  T
Q  196 c-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    | |||||||| |||| |  || |||||||| |||| |||||||    
T  34451548 cttttgtcttcaggagcgcttctcttcagatgcttcaagcttc 34451506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 139353 - 139234
Alignment:
Q  90 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttca 189  Q
    ||||| |||||||||| ||||||||||||  |||||||||  ||  |||||||||||   ||||||| || |||||||||||||||| |||| || ||||    
T  139353 aaacagcttttgaagccttaagttgcatcctctgatgaacgacaatttctggtgatttttagcttctgataaacttgcttctgatgatgtcatcatttca 139254  T
Q  190 ggagcactttgtctttagga 209  Q
    ||||||||||||||| ||||    
T  139253 ggagcactttgtcttcagga 139234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 147374 - 147255
Alignment:
Q  90 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttca 189  Q
    ||||| |||||||||| ||||||||||||  |||||||||  ||  |||||||||||   ||||||| || |||||||||||||||| |||| || ||||    
T  147374 aaacagcttttgaagccttaagttgcatcctctgatgaacgacaatttctggtgatttttagcttctgataaacttgcttctgatgatgtcatcatttca 147275  T
Q  190 ggagcactttgtctttagga 209  Q
    ||||||||||||||| ||||    
T  147274 ggagcactttgtcttcagga 147255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 174
Target Start/End: Complemental strand, 20487968 - 20487818
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatcct-tgaaacaacttttgaagctttaagttgcatctcctg 123  Q
    ||||||||||||||||||   |||||| |||||||||||||| || ||  ||| ||||| ||  | |||||||||||||||| ||||||||||||  |||    
T  20487968 tttcaaaatagccgttgcttcacttttacagtcttctgcaatctttagacgaggttgaaccccattaaacaacttttgaagccttaagttgcatcctctg 20487869  T
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
    |||||||||| ||||| ||||||   ||||||| || ||||||||||||||    
T  20487868 atgaactgcaacttctagtgatttttagcttctgataaacttgcttctgat 20487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 22386958 - 22387036
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||| ||||| ||||||||| ||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||    
T  22386958 tttgaaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttatgatgaacttgcttctgatga 22387036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 24117069 - 24117155
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||||||| ||| |||| || || |||||||| ||||||||||||    
T  24117069 gcttctgatgaacttgtttctgatgacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagatgctttaagcttc 24117155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 9718094 - 9718170
Alignment:
Q  161 aacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| ||||  | || |||||||||||||||||||||    
T  9718094 aacttgcttctgatgacgtcatcacttcaagagcactttgtcttcaggagtagttctcttcagacgctttaagcttc 9718170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 13435780 - 13435859
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||||| || || |||||||| |||| |||||||    
T  13435780 atgaacttgcttctgatgacgtcatcacttcaggagcacttttactttaggagcacttctcttcagatgcttcaagcttc 13435859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 17381661 - 17381712
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17381661 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcagga 17381712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 237
Target Start/End: Original strand, 19624144 - 19624289
Alignment:
Q  91 aacaacttttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    |||||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||     | |||| ||| |  ||||||||||||||||| |||||     
T  19624144 aacaacctttgaagctttaagacttgcatctcctgatgaacttcagcttctggtgat--cttgtttctgatg-agatgcttctgatgacgtcatcacttt 19624240  T
Q  189 aggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||| ||| |||| || || |||||||| |||| |||||||    
T  19624241 aggagcactttgacttcaggagcacttctcttcagatgcttcaagcttc 19624289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 237
Target Start/End: Complemental strand, 20112678 - 20112536
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggag 193  Q
    ||||| |||||||||||  |||||||| ||||||||| ||||||| ||||||    ||||||| | |||||||||||||||||||||| ||||||| ||     
T  20112678 ctttttaagctttaagtcttgcatctcttgatgaacttcagcttcaggtgatctttagcttctgaagaacttgcttctgatgacgtcatcacttcatgaa 20112579  T
Q  194 cactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||| ||| |||||||| || || |||| ||| |||| |||||||    
T  20112578 cac-ttgactttaggagcacttctctttagatgcttcaagcttc 20112536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 237
Target Start/End: Complemental strand, 12715398 - 12715257
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggag 193  Q
    |||||||||||||||||  |||||||||||||||||| || ||||| |||||     |||||| |||||||| ||||||||||||||| |||||| |||     
T  12715398 cttttgaagctttaagtcttgcatctcctgatgaactacaacttctagtgatctt--gcttctgatgaacttccttctgatgacgtcatcacttc-ggaa 12715302  T
Q  194 cac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||| |||||||| |||| || || |||||||| |||| |||||||    
T  12715301 cacttttgtcttcaggagcacttctcttcagatgcttcaagcttc 12715257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 12423427 - 12423504
Alignment:
Q  132 cagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| ||||||| | | |||||| || ||||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  12423427 cagcttttggtgatcctcggcttctgataaacttgcttctgatgacgtcatcacttcaagagcactttgtcttcagga 12423504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 16336385 - 16336438
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaac 211  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  16336385 atgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcaggaac 16336438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 26972135 - 26972082
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  26972135 gcttctaataaacttgcttctgatgacgtcaccatttcaggagcaatttgtctt 26972082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 26972278 - 26972130
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||  |||||   ||| ||| |||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  26972278 tttcaaaatagttgttgcttcactcttcaagtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcct 26972179  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttct 171  Q
    |||||| |  ||||||||||||||  | |||||| ||||||||||||||    
T  26972178 gatgaaatagagcttctggtgattttctgcttctgatgaacttgcttct 26972130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 19832924 - 19832868
Alignment:
Q  153 ttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||| |||| ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  19832924 ttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 19832868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 10640344 - 10640297
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  10640344 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 10640297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 12423360 - 12423435
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttg 101  Q
    ||||||||||| |||||| ||||||||||||||||||||| | ||||  |||||||||||| | ||||| ||||||    
T  12423360 tttcaaaatagtcgttgctatacttttccagtcttctgcattcttagacgagtttgaatccattaaacagcttttg 12423435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 13602413 - 13602460
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||    
T  13602413 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactt 13602460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Original strand, 18435798 - 18435848
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgt 201  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  18435798 gcttctagtggactagcttctgatgacgtcaccacttcaggagcactttgt 18435848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 26589848 - 26589906
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| ||||||||||||||||||||||||  ||||||| ||||||||||||| ||||    
T  26589848 gcttctgatgaacttgcttctgatgacgtcattacttcagaagcactttgtcttcagga 26589906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 15302422 - 15302494
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcac--tttgtctttaggaacaattttcttcagacgctttaag 233  Q
    ||||||||||||||||||| ||||||||||||||  |||||||| |||| || || ||||||||||| |||||    
T  15302422 cttgcttctgatgacgtcatcacttcaggagcactttttgtcttcaggagcacttctcttcagacgccttaag 15302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 19688931 - 19688980
Alignment:
Q  91 aacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctg 140  Q
    |||||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  19688931 aacaacctttgaagctttaagtcgcatctcctgatgaacttcagcttctg 19688980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 139
Target Start/End: Original strand, 23284663 - 23284779
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   |||||||  ||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  23284663 tttcaaaataggcgttgcttcacttttctggtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcct 23284762  T
Q  123 gatgaactgcagcttct 139  Q
    |||||||| ||||||||    
T  23284763 gatgaacttcagcttct 23284779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 21128396 - 21128460
Alignment:
Q  112 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||| ||||||||||| |||||||||||||  | ||||||| ||||||| |||||||||||    
T  21128396 ttgcatcttctgatgaactgtagcttctggtgatataaagcttctgatgaactcgcttctgatga 21128460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 26943803 - 26943851
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||||    
T  26943803 gcttctgacgaacttgcttctgatgacgtcatcacttcaggagcacttt 26943851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 15302299 - 15302421
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcct 122  Q
    ||||||||||||||||||   |||||||||||||||||||||| ||||  ||| || ||||| |  |||||| ||||| ||||||||  |||||||||||    
T  15302299 tttcaaaatagccgttgcttcacttttccagtcttctgcaatgtttagacgagattaaatccattgaacaacctttgacgctttaagtcttgcatctcct 15302398  T
Q  123 gatgaactgcagcttctggtgat 145  Q
     |||| ||  ||||| |||||||    
T  15302399 aatgagctttagcttttggtgat 15302421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 19470908 - 19470955
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  19470908 gcttctgatgaacttgcttctgatgacgtcatcactttaggagcactt 19470955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 19688972 - 19689019
Alignment:
Q  149 cagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac 196  Q
    |||||||| |||||||||||||||| ||||||| ||||||||||||||    
T  19688972 cagcttctgatgaacttgcttctgacgacgtcatcacttcaggagcac 19689019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 23284805 - 23284852
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  23284805 gcttctaatgaacttgcttctgatgacatcatcacttcagaagcactt 23284852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 25597720 - 25597767
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  25597720 gcttctgatgaacttgcttcagatgacgtcatcacttcaggagcactt 25597767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 13602264 - 13602393
Alignment:
Q  19 caatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgc 115  Q
    |||| |||||||||||||  |||||   ||| |||||||||||||||||| ||||   || || ||||| |  |||||| |||||||||||||||  |||    
T  13602264 caattcatttcaaaatagtggttgcttcactcttccagtcttctgcaatgcttagacaagattaaatccattgaacaacctttgaagctttaagtcttgc 13602363  T
Q  116 atctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||  ||||||| |||||    
T  13602364 atctcctgatgaactatagcttcttgtgat 13602393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 19482994 - 19483052
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| | |||||||||||| ||||||||| |||||||| ||||||||||||| ||||    
T  19482994 gcttctgacgaacttgcttctaatgacgtcatcacttcagaagcactttgtcttcagga 19483052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 20635866 - 20635957
Alignment:
Q  90 aaacaact-tttgaagctttaagttgcatctcctgatgaactgca----gcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||| |||||| ||||| ||||||||| |||||| |||| |    |||||||||||| || ||||||| |||||||||||||||||||    
T  20635866 aaacaactatttgaaactttaggttgcatcttctgatgtactgtacgtagcttctggtgatacatagcttctgatgaacttgcttctgatga 20635957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 19482819 - 19482954
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta-ggtgagtttgaatccttgaaacaacttttg 101  Q
    |||| ||||||||||||||||| |||||||||||  ||||  | | ||| | ||||| ||||||| ||  ||  || |||||||||||||||||||||||    
T  19482819 ttgaggaataagcatccaatgcttttcaaaatagatgttgttaaa-tttccaagtctgctgcaattttctggcaagcttgaatccttgaaacaacttttg 19482917  T
Q  102 aagctttaagttgcatctcctgatgaactgcagcttct 139  Q
    |||||||| |||| | || ||| ||| |||||||||||    
T  19482918 aagctttaggttg-agcttctggtgatctgcagcttct 19482954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 17381705 - 17381757
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  17381705 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 17381757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 171
Target Start/End: Original strand, 18435732 - 18435803
Alignment:
Q  102 aagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttct 171  Q
    |||||||||||  ||||||||||||||||||  ||||||| |||||   |||||||| ||||||||||||||    
T  18435732 aagctttaagtcttgcatctcctgatgaactagagcttctagtgatcttcagcttctgatgaacttgcttct 18435803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 19832875 - 19832823
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  19832875 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 19832823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 9717942 - 9718064
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||  |||||   ||| |||||||||||| ||||||| ||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  9717942 tttcaaaatagttgttgcttcactcttccagtcttctacaatgtttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 9718041  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  ||||||| |||||    
T  9718042 gatgaactagagcttctagtgat 9718064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 12349200 - 12349243
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||    
T  12349200 gcttctgatgatgtcatcacttcaggagcactttgtcttcagga 12349243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 18435850 - 18435901
Alignment:
Q  186 ttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||| |||| || || |||||||| ||||||||||||    
T  18435850 ttcaggagcactttgtcttcaggagcagttctcttcagatgctttaagcttc 18435901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Original strand, 19482931 - 19482974
Alignment:
Q  133 agcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||||||||   ||||||||||||||||||||||||||||    
T  19482931 agcttctggtgatctgcagcttctaatgaacttgcttctgatga 19482974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 20635947 - 20636006
Alignment:
Q  151 gcttctaatgaactt-gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| |||||||| |||||||||||||||| ||||||||  |||||||||||| ||||    
T  20635947 gcttctgatgaactttgcttctgatgacgtcatcacttcagaggcactttgtcttcagga 20636006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 13435704 - 13435753
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||  |||||||||||||||||| |||||| |||||||    
T  13435704 tttgaagctttaagtcttgcatctcctgatgaacttcagcttatggtgat 13435753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 15531532 - 15531446
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagctt 236  Q
    |||||| ||||||||||||||||| | |||| |||||||||| ||| |||||||  |||| |  || |||||||| |||||||||||    
T  15531532 gcttctgatgaacttgcttctgattatgtcatcacttcaggatcacttttgtctacaggagcgcttctcttcagatgctttaagctt 15531446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 140
Target Start/End: Complemental strand, 14100465 - 14100373
Alignment:
Q  51 ttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctg 140  Q
    |||||||||||| ||||| |||| |||| || ||||| |  |||| | |||||| ||||||||  |||||||||||||||||| |||||||||    
T  14100465 ttccagtcttctacaatgcttagatgagattaaatccattgaacatcctttgaaactttaagtcttgcatctcctgatgaacttcagcttctg 14100373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 16336429 - 16336481
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||| | |||| |||| |||| || ||||||||||||||||||||||||    
T  16336429 cttcaggaacgctttatcttcaggagcagttttcttcagacgctttaagcttc 16336481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 20487775 - 20487723
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| |||||| || |||| |||| || ||||||||||||||||||||||||    
T  20487775 cttcaagagcaccttatcttcaggagcagttttcttcagacgctttaagcttc 20487723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 21625204 - 21625303
Alignment:
Q  31 aaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcctgatga 127  Q
    |||||||||||||  |||| ||||| |||||||||||| ||||  ||| || ||||| |  |||||| ||||||||| ||||  ||||||||||||||||    
T  21625204 aaatagccgttgctttactcttccaatcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctgtaagtcttgcatctcctgatga 21625303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 24116999 - 24117050
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||  ||||||| |||||||||| || |||||||||||    
T  24116999 cttttgaagctttaagtcttgcatcttctgatgaacttcatcttctggtgat 24117050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 6407783 - 6407991
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    ||||||||||| |||||||||||| || ||||||||||||||  ||||||||||||||||||||||| ||||  |||||||||||||| ||||| |||||    
T  6407783 ctttgaagaattagcatccaatgccttccaaaatagccgttgtaatacttttccagtcttctgcaatcttagacgagtttgaatcctttaaacagctttt 6407882  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  6407883 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacaacttctgatgaacttgcttttgatgacgtcatcacttcaggagcactttg 6407982  T
Q  201 tctttagga 209  Q
    |||| ||||    
T  6407983 tcttcagga 6407991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 14989545 - 14989336
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||| || |||| |||||||||  ||||||||||| ||||| ||||| || ||  |||||||||||||| ||||  ||||    
T  14989545 ctttgaagaataagcatccaatgccttccaaattagccgttgttatacttttccaatcttcagcaatcttcagacgagtttgaatcctttaaacggcttt 14989446  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  14989445 tgaagctttaagttgcatctcctgatgaattgcagcttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcactttaggagcacttt 14989346  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  14989345 gtcttcagga 14989336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 13430722 - 13430512
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||| | |||| ||||| || ||||||||||| ||||    
T  13430722 ctttgaagaataagcatccaatgcgtttcaaaatagccgttgtcatacttttctaatcttctgcaatttctaggcgagttagagtccttgaaacagcttt 13430623  T
Q  100 tgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||  ||||||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  13430622 tgaaaactttaagttccatctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcattacttcaggagcactt 13430523  T
Q  199 tgtctttagga 209  Q
    |||||| ||||    
T  13430522 tgtcttcagga 13430512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 21288460 - 21288669
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| || ||  |||||||| |||    
T  21288460 ctttgaggagtaagcatccaatacatttcaaaatagccgttgccatacttttccagtcttctgcaatctttaggcgagttagagtcaatgaaacaaattt 21288559  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||| |||| ||||  || ||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  21288560 tgaatctttgagttcaatttcctgatgaactgcagcttgtggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcacttt 21288659  T
Q  200 gtctttagga 209  Q
     |||| ||||    
T  21288660 ttcttcagga 21288669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 21301079 - 21301288
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||| ||||| || || |||||||| ||||    
T  21301079 ctttgaggagtaagcatccaatgcatttcaaaatagccgttgccatacttttccaatcttctgcaatctttaggcgagttagagtcattgaaacagcttt 21301178  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||| |||| ||||  || ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| ||||| |  ||||||||    
T  21301179 tgaaactttgagttcaatttcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatgatgtcatcactttaaaagcacttt 21301278  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  21301279 gtcttcagga 21301288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 23185286 - 23185074
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   |||||||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||| ||||||||||||||    
T  23185286 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttatgttgcatctcctga 23185187  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||||||||  |||||||| |||||||||||||||||||| |||| ||||||||||||||||||||| | || ||| ||||||||||    
T  23185186 tgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacatcactacttcaggagcactttgtcttcaagagcaaatttcttcaga 23185087  T
Q  225 cgctttaagcttc 237  Q
    |||||||||||||    
T  23185086 cgctttaagcttc 23185074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 43639840 - 43640016
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||| ||||||||| |||||| ||||||||||| ||||| ||||||||||||||||| |||||| || ||| |||||||||||||||||||||||||    
T  43639840 ctttgaaaaataagcattcaatgcctttcaaaatagtcgttgtcatacttttccagtcttttgcaatttttaggcgagtttgaatccttgaaacaacttt 43639939  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||| ||||  |||||||||||||    
T  43639940 tgaagctttaagttgcatctcatgatgaactgcatcttctggtgatacacagcttctgatgattttgcttctgatga 43640016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 18151740 - 18151546
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||| || |||| ||| |||||  ||||||||||||||||||||||| || ||  ||||||||||||||          |    
T  18151740 ctttgaagaataagcatccaatgccttccaaattagtcgttgttatacttttccagtcttctgcaatcttcagacgagtttgaatcctt----------t 18151651  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  18151650 tgaagctttaagttgcatcttctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 18151551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 1745217 - 1745426
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||| || |||||||||||||||||||| |||||||||||| ||| ||| ||||||||| ||| | |||| ||||  || ||||||||||||||||    
T  1745217 ctttgaagtattagcatccaatgcatttcaaactagccgttgccacactcttctagtcttctgtaatttctaggcgagtaagagtccttgaaacaacttt 1745316  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||   || |||| |||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||  |||||||    
T  1745317 tgaaaacttgagttccatctcttgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcagaggcacttt 1745416  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  1745417 gtcttcagga 1745426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 45538499 - 45538287
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||   ||||||||||||||||||||| || ||  ||| |||||||| | |||||||||||||||| |||||||||||| | |||    
T  45538499 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaaacaacttttgaagccttaagttgcatcccatga 45538400  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||||||||    |||| | || |||| ||||||||||||||||||||||||||||| |||| |||| |||| || |||||||||||    
T  45538399 tgaactgcagcttctggtgatttttggcttatgataaactcgcttctgatgacgtcaccacttcaggagcgctttatcttcaggagcagttttcttcaga 45538300  T
Q  225 cgctttaagcttc 237  Q
    |||||||||||||    
T  45538299 cgctttaagcttc 45538287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 33560318 - 33560157
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||| | |||| ||||| || ||||||||||||||||    
T  33560318 ctttgaagaattagcatccaatgcatttcaaactagccgttgccacactcttccagtcttctgtaatttctaggcgagttagagtccttgaaacaacttt 33560219  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatga 161  Q
    ||||   || |||| |||||| |||||||||||||||||||||||| || ||||||| ||||    
T  33560218 tgaaaacttgagttccatctcttgatgaactgcagcttctggtgatacatagcttctgatga 33560157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 40845444 - 40845296
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||  |||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  40845444 caaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatcctt-aaacaacttttgaagctttaagctgcatctcctgatga 40845346  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    |||  |||||||||||| ||  ||||||| || |||||||||||||||||    
T  40845345 actatagcttctggtgagtcttagcttctgataaacttgcttctgatgac 40845296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 15336148 - 15335996
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   |||||  |||||||||||||| || ||  |||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  15336148 tttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaagttgcatctcctga 15336049  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    |||||| |||||||||||||||| |||||||| || |||||||||||||||||    
T  15336048 tgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgac 15335996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 15425213 - 15425061
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   |||||  |||||||||||||| || ||  |||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  15425213 tttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaagttgcatctcctga 15425114  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    |||||| |||||||||||||||| |||||||| || |||||||||||||||||    
T  15425113 tgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgac 15425061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 15516517 - 15516365
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   |||||  |||||||||||||| || ||  |||||||| ||| | |||||||||||||||||||||||||||||||||||    
T  15516517 tttcaaaatagtcgttgcttcactttctcagtcttctgcaatctttagacgagtttgattccattaaacaacttttgaagctttaagttgcatctcctga 15516418  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    |||||| |||||||||||||||| |||||||| || |||||||||||||||||    
T  15516417 tgaactacagcttctggtgattctcagcttctgataaacttgcttctgatgac 15516365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 36105289 - 36105437
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    ||||||||||||||  ||||||||||| ||||||||||| || ||  |||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  36105289 caaaatagccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatga 36105388  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||  ||||||||||||||  |||||||| || ||||||||||||||||    
T  36105389 actatagcttctggtgattttcagcttctgataaacttgcttctgatga 36105437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 17797513 - 17797664
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||||||||||   ||||||||||||||||| |||| ||||  ||| |||||||| |  |||||||||||| |||||||||||||||||||||    
T  17797513 tttcaaactagccgttgcatcacttttccagtcttctgtaatggttagacgagattgaatccattgaacaacttttgaggctttaagttgcatctcctga 17797612  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| ||||||||||||||||||  |||||||| |||||||||||||||||||    
T  17797613 tgagctgcagcttctggtgattttcagcttctgatgaacttgcttctgatga 17797664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 24833051 - 24832937
Alignment:
Q  90 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttca 189  Q
    ||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||| |||||||    
T  24833051 aaacagcttttgaagccttaagttgcatcctctgatgaactgcagcttctggtgatttttagcttctaataaacttgcttctgatgacgtcatcacttca 24832952  T
Q  190 ggagcactttgtctt 204  Q
    |||||||||||||||    
T  24832951 ggagcactttgtctt 24832937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 75 - 177
Target Start/End: Complemental strand, 3598356 - 3598254
Alignment:
Q  75 gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
    |||||||||||  | ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||| |||||||||||| ||||    
T  3598356 gagtttgaatctgttaaacaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaacttgcttatgat 3598257  T
Q  175 gac 177  Q
    |||    
T  3598256 gac 3598254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 237
Target Start/End: Original strand, 19156360 - 19156501
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    ||||||||||||| |  |||||||| ||||||||| || |||||||||||   |||||||| ||||||||||||||||||| |||| |||||||||||||    
T  19156360 tttgaagctttaattcttgcatctcttgatgaactacaacttctggtgatcttcagcttctgatgaacttgcttctgatgatgtcatcacttcaggagca 19156459  T
Q  196 ctttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| ||| |||| || || |||||||||||||||||||||    
T  19156460 ctttgacttcaggagcacttctcttcagacgctttaagcttc 19156501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 22663210 - 22663358
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    ||||||||  ||||| ||| ||||||||||||||||||| || ||  |||||||||||| | ||||| ||||||||||||||||||||||||||| ||||    
T  22663210 caaaatagttgttgctatatttttccagtcttctgcaatcttcagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctaatga 22663309  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| || ||||| |||||   ||||||||||| ||||||||||||||||    
T  22663310 actacaacttctagtgatcttcagcttctaataaacttgcttctgatga 22663358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 22673872 - 22674020
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    ||||||||  ||||| ||||||||| ||||||||||||| |  ||  |||||||||||| | |||||||||||||||||||||||||||||||| |||||    
T  22673872 caaaatagatgttgctatacttttctagtcttctgcaatctccagacgagtttgaatccgttaaacaacttttgaagctttaagttgcatctccggatga 22673971  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| || |||||||||||   |||||||| || ||||||||||||||||    
T  22673972 actacaacttctggtgatcttcagcttctgataaacttgcttctgatga 22674020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 17441868 - 17441655
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||  || | |||||||||||||||||| ||||  ||| || | ||| |  |||||| ||| |||||||||||  ||||||||||    
T  17441868 tttcaaaatagtcgttgctttagtcttccagtcttctgcaatgcttagaggagattaagtccattgaacaacctttaaagctttaagtcttgcatctcct 17441769  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    ||||||||  |||||||||||||   |||||||| || |  | |||||||||||||||| |||||||||||||||||| ||| |||| || || ||||||    
T  17441768 gatgaactagagcttctggtgatcttcagcttctgattagat-gcttctgatgacgtcatcacttcaggagcactttgacttcaggagcacttctcttca 17441670  T
Q  223 gacgctttaagcttc 237  Q
    |||||||||||||||    
T  17441669 gacgctttaagcttc 17441655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 24551365 - 24551516
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   ||||||||||||||||||||| || ||  ||| |||||||| | |||||||||||||||| |||||||||||| | |||    
T  24551365 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgaggttgaatccattaaacaacttttgaagccttaagttgcatcccatga 24551464  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||||||||||||||||    |||||| || ||||||||||| ||||    
T  24551465 tgaactgcagcttctggtgatttttggcttctgataaacttgcttctaatga 24551516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 18121169 - 18120956
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||| |||||   ||| ||| |||||||||||||| ||||  ||| || ||||| |  |||| | |||||| ||||||||  ||||||||||    
T  18121169 tttcaaaatagcagttgcttcactcttctagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaaactttaagtcttgcatctcct 18121070  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    ||||||||  |||||||||||||    ||||||| ||||  | |||||||||| ||||| |||||||||||||||||||||| |||| || || ||||||    
T  18121069 gatgaactagagcttctggtgatctttagcttctgatgagat-gcttctgatggcgtcatcacttcaggagcactttgtcttcaggagcagttctcttca 18120971  T
Q  223 gacgctttaagcttc 237  Q
     ||||||||||||||    
T  18120970 aacgctttaagcttc 18120956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 9320681 - 9320812
Alignment:
Q  47 acttttccagtcttctgcaatgtt-aggtgagtttgaatcct-tgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtga 144  Q
    ||||||||||||||||||||| || ||  ||| ||||||||  | ||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  9320681 acttttccagtcttctgcaatctttagacgaggttgaatccaattaaacagcttttgaagccttaagttgcatcctctgatgaactgcagcttctggtga 9320780  T
Q  145 ttcacagcttctaatgaacttgcttctgatga 176  Q
    ||   ||||||| || ||||||||||||||||    
T  9320781 tttttagcttctgataaacttgcttctgatga 9320812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 1237728 - 1237879
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   |||||||| |||||||||||| || ||  ||| |||||||| | ||||| |||||||||| |||||||||||| | |||    
T  1237728 tttcaaaatagtcgttgcttcacttttccggtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagccttaagttgcatcccatga 1237827  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||| ||||||||||||| |||    |||||| || ||||||||||||||||    
T  1237828 tgaattgcagcttctggtaatttttggcttctgataaacttgcttctgatga 1237879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 16681223 - 16681136
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||| |||||||| |||| || || |||||||||||||||||||||    
T  16681223 gcttctgatgaacttgcttctgatgacgtcatcacttcatgagcacttttgtcttcaggagcacttctcttcagacgctttaagcttc 16681136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 20382314 - 20382228
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||||| ||| |||| || || ||||||||||||| |||||||    
T  20382314 gcttctgatgaacttgcttttgatgacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagacgcttcaagcttc 20382228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 21932974 - 21933125
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||||||||    ||| || ||||||| ||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  21932974 tttcaaaatagccgttgtttcactctttcagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 21933073  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
    |||||| |  ||||||||||||||  |||||||| |||||||||||||||||    
T  21933074 gatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgat 21933125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 30421467 - 30421367
Alignment:
Q  47 acttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||||||| ||||  ||| || ||||| |  |||| | |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  30421467 acttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgttgcatcttctgatgaactgcagcttctggtgat 30421368  T
Q  146 t 146  Q
    |    
T  30421367 t 30421367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 197
Target Start/End: Complemental strand, 602780 - 602606
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| | ||||   ||| ||| |||||||||||||| ||||  ||| ||||||||    |||||| ||||||| |||||||  ||||| ||||    
T  602780 tttcaaaatagtcattgcttcactcttcaagtcttctgcaatgcttagacgagattgaatccaatgaacaacctttgaagttttaagtcttgcatttcct 602681  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    ||||||||  ||||||| |||||    ||||| | |||||||||||||||||||||||| |||||||||||||||    
T  602680 gatgaactttagcttcttgtgatctttagcttttgatgaacttgcttctgatgacgtcatcacttcaggagcact 602606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 18321153 - 18321045
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    |||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||   |  ||||| ||| |  ||||||||||||||||| ||||||    
T  18321153 aacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgatcttctacttctgatg-agatgcttctgatgacgtcatcacttc 18321055  T
Q  189 aggagcactt 198  Q
    ||||||||||    
T  18321054 aggagcactt 18321045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 17797667 - 17797739
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| || |||| |||||| ||||||||||||    
T  17797667 ttgcttctgatgacgtcaccatttcaggagcactttgtcttcaggagcagtttt-ttcagatgctttaagcttc 17797739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 20255485 - 20255400
Alignment:
Q  152 cttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| |||||||| ||| ||||||||||| |||||||||||||||||| ||| |||| || || |||||||||||||||| ||||    
T  20255485 cttctgatgaacttccttatgatgacgtcatcacttcaggagcactttgacttcaggagcagttctcttcagacgctttaaacttc 20255400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 29693548 - 29693636
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac--tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||  |||||||| | || || || |||||||| ||||||||||||    
T  29693548 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttttgtcttcaagagcacttctcttcagatgctttaagcttc 29693636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 18679979 - 18680090
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    ||||||||| |||||  ||||||| |||||||| || ||||||| |||||     |||||| |||||||||||||||||||||||| |||||||||||||    
T  18679979 tttgaagctctaagtcttgcatcttctgatgaaatgaagcttctagtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 18680076  T
Q  196 ctttgtctttagga 209  Q
    ||||| ||| ||||    
T  18680077 ctttgacttcagga 18680090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 1237884 - 1237942
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  1237884 gcttctgatgaacttgtttcagatgacgtcaccacttcaggagcactttgtcttcagga 1237942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 17914692 - 17914778
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||| |||||||||  |||||| |||||||||| |||||||| || || |||||||| |||| |||||||    
T  17914692 gcttctgatgaacttgcttctaatgacgtcattacttcaagagcactttgactttaggagcacttctcttcagatgcttcaagcttc 17914778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 36105442 - 36105500
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  36105442 gcttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 36105500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 16189073 - 16189197
Alignment:
Q  24 catttcaaaatagccgttgccatacttttccagtcttctgcaat-gttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctc 120  Q
    ||||||||||||| ||||||   ||| ||||||||||||||||| ||| |  ||| || ||||| | ||||||| ||||||||||||||  |||||||||    
T  16189073 catttcaaaatagtcgttgcttcactcttccagtcttctgcaatggttggacgagattaaatccattaaacaacctttgaagctttaagtcttgcatctc 16189172  T
Q  121 ctgatgaactgcagcttctggtgat 145  Q
    || ||||||| | ||||||||||||    
T  16189173 ctaatgaacttcggcttctggtgat 16189197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 43774053 - 43774110
Alignment:
Q  119 tcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||    
T  43774053 tcctgatgaactacagcttctggtgatacatagcttctgatgaacttgcttctgatga 43774110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 200
Target Start/End: Complemental strand, 12757734 - 12757646
Alignment:
Q  112 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    |||||||||||||||||||  |||| ||||||||   |||||||| || ||||||||||||||||||||| || || | ||||||||||    
T  12757734 ttgcatctcctgatgaactagagctactggtgatcttcagcttctgatcaacttgcttctgatgacgtcatcattttatgagcactttg 12757646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 2811070 - 2811141
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||| |||||||||||| || |||||| | ||||| || |||||||| ||||||||||||    
T  2811070 gcttctgatgacgtcatcacttcaggagcgctatgtcttcatgaacacttctcttcagatgctttaagcttc 2811141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 16207397 - 16207519
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||  |||||  |||| |||||||||||||||||| ||||  ||| || ||||| |  |||| | |||||||||||||||  ||||||||||    
T  16207397 tttcaaaatagtagttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcgtttgaagctttaagtcttgcatctcct 16207496  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  |||||||||||||    
T  16207497 gatgaactagagcttctggtgat 16207519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 19707736 - 19707783
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||    
T  19707736 gcttctaatgaacttgcttctgatgatgtcatcacttcaggagcactt 19707783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 24551528 - 24551579
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  24551528 atgaactcgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 24551579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 30421362 - 30421319
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  30421362 gcttctgatgacgtcactacttcaggagcactttgtctttagga 30421319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 39693626 - 39693748
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| | ||||   ||| |||||||||||||||||| ||||  ||| |||||||| |  |||||| |||||||||||||||  ||||||||||    
T  39693626 tttcaaaatagtcattgcttcactcttccagtcttctgcaatgcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatctcct 39693725  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||| || || |||||||||||    
T  39693726 gatgagctacaacttctggtgat 39693748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 43640013 - 43640064
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  43640013 atgaacttgcttctgatgacgtcatcacttcatgagcactttgtcttcagga 43640064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 43774100 - 43774159
Alignment:
Q  151 gcttctaatgaactt-gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  43774100 gcttctgatgaactttgcttctgatgacgtcatcacttcagaagcactttgtctttagga 43774159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 23271123 - 23271038
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac--ttgcttctgatgacgtca 181  Q
    |||||| ||| | |||| |||| ||||| ||||| |||||||||||||||| ||||||| ||||||  ||||||||||||||||||    
T  23271123 tttgaaacttcaggttgaatcttctgatcaactgtagcttctggtgattcatagcttctgatgaacttttgcttctgatgacgtca 23271038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 40845295 - 40845249
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  40845295 cttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 40845249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 21933133 - 21933170
Alignment:
Q  167 cttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21933133 cttctgatgacgtcaccacttcaggagcactttgtctt 21933170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 22663375 - 22663416
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  22663375 cttgcttctgatgacgtcatcacttcaggagcactttgtctt 22663416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 23263531 - 23263458
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||| |||||||||||||||||||||||| |||||||||||| ||||  ||| |||| || || ||||||||    
T  23263531 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcgcttttacttcaggagcacttctcttcaga 23263458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 33083014 - 33083070
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  33083014 aacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 33083070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 17267711 - 17267790
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||| || |||||| |||||||| ||||||||| ||| ||| ||| || |||||||| |||| |||||||    
T  17267711 atgaacttgcttctaataacgtcatcacttcagaagcactttgacttcaggcacacttctcttcagatgcttcaagcttc 17267790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 22674017 - 22674056
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  22674017 atgaacttgcttctgatgacgtcatcacttcaggagcact 22674056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 39693775 - 39693854
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||| |||||||||||||| ||||||||| |||||||| ||| || | || || ||||| || ||||||||||||    
T  39693775 atgaacttgtttctgatgacgtcatcacttcaggtgcactttgacttcagaagcacttctcttcggatgctttaagcttc 39693854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 20382381 - 20382332
Alignment:
Q  98 tttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtgat 145  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  20382381 tttgaagctttaagacttgcatctcctgatgaacttcagcttctggtgat 20382332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 145
Target Start/End: Original strand, 22745603 - 22745700
Alignment:
Q  51 ttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||| ||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||||||||||  |||||||||||||    
T  22745603 ttccagtcttctacaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgat 22745700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 24646571 - 24646617
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||| |||||||||||||||||||||||| |||||||| ||||||    
T  24646571 gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcact 24646617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 17267630 - 17267686
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| |||||||||||||||  |||||||| ||||||||| ||||||||||||||    
T  17267630 aacaacctttgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgat 17267686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 19943399 - 19943450
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||  |||||||||||||||||| |||||||| |||||    
T  19943399 cttttgaagctttaagtcttgcatctcctgatgaacttcagcttctagtgat 19943450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 33083095 - 33083175
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcacttt-gtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||| | ||| | || || || |||||||||||||||||||||    
T  33083095 atgaacttgtttctaatgacgtcatcacttcaagagcacttttgacttcaagagcacttctcttcagacgctttaagcttc 33083175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 9320817 - 9320860
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||    
T  9320817 gcttctgatgacgtcaccactacagaagcactttgtcttcagga 9320860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 22745720 - 22745767
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||| ||||||| ||||||| ||||||||    
T  22745720 gcttctgatgaacttgcttctgacgacgtcatcacttcatgagcactt 22745767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 6318365 - 6318299
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  6318365 cttgcttctgatgacgtcatcacttcagaagcacttcaacttcaggagcagttttcttcagatgctt 6318299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 19943470 - 19943516
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  19943470 gcttctgatgaacttgcttccgatgtcgtcatcacttcaggagcact 19943516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 198
Target Start/End: Complemental strand, 19956256 - 19956222
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||||||||||| ||||||||||||||||    
T  19956256 ttgcttctgatgacgtcatcacttcaggagcactt 19956222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 19461309 - 19461390
Alignment:
Q  96 cttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattc-acagcttctaatgaacttgcttctgatga 176  Q
    |||||||| ||| | |||| |||| ||||| ||||| |||||||||||||   | ||||||||||||| |||||||||||||    
T  19461309 cttttgaaacttcaggttgaatcttctgatcaactgtagcttctggtgatgatatagcttctaatgaagttgcttctgatga 19461390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 19558987 - 19559068
Alignment:
Q  96 cttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattc-acagcttctaatgaacttgcttctgatga 176  Q
    |||||||| ||| | |||| |||| ||||| ||||| |||||||||||||   | ||||||||||||| |||||||||||||    
T  19558987 cttttgaaacttcaggttgaatcttctgatcaactgtagcttctggtgatgatatagcttctaatgaagttgcttctgatga 19559068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 28903597 - 28903654
Alignment:
Q  90 aaacaact-tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgatt 146  Q
    |||||||| |||||| ||||| ||||||||| |||||||| || ||||||||||||||    
T  28903597 aaacaactatttgaaactttaggttgcatcttctgatgaattgtagcttctggtgatt 28903654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 15780539 - 15780479
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| |||||||| |||||||   ||| |||| || |||||||||||    
T  15780539 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 15780479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 17525717 - 17525666
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    ||||||||| |||||||  |||||||||||||||||| ||| ||||||||||    
T  17525717 cttttgaagatttaagtcttgcatctcctgatgaactacagtttctggtgat 17525666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 21933168 - 21933220
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| |||||||||| ||| |||| || || |||||||||||||||||||||    
T  21933168 cttcaagagcactttgacttcaggagcagttctcttcagacgctttaagcttc 21933220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 22674061 - 22674113
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| ||||  ||| |||| || ||||||||||||||||||||||||    
T  22674061 cttcaggagcgctttaacttcaggagcagttttcttcagacgctttaagcttc 22674113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 26111684 - 26111748
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  26111684 tgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcagatgctt 26111748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 30421322 - 30421274
Alignment:
Q  189 aggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||| |||||||| |||| || |||| |||||||||||||||||||    
T  30421322 aggagcagtttgtcttcaggagcagttttgttcagacgctttaagcttc 30421274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 36105493 - 36105545
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || |||||||||||| |||||||||||    
T  36105493 cttcaggagcgctttatcttcaggagcagttttcttcagacactttaagcttc 36105545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 8e-79; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 46796462 - 46796254
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||| ||| ||||| ||||||| |||||||||  ||||||||||||||||||||||| ||||  |||||||||||||| |||||||||||    
T  46796462 ctttgaagaataagtatctaatgcctttcaaattagccgttgtaatacttttccagtcttctgcaatcttagacgagtttgaatcctttaaacaactttt 46796363  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||    
T  46796362 gaagctttaagttgcatctcctgatgaactgcagcttcttgtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactctg 46796263  T
Q  201 tctttagga 209  Q
    |||| ||||    
T  46796262 tcttcagga 46796254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 40851032 - 40851241
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||| || |||||||| || ||||    
T  40851032 ctttgaagaataagcatccaatgcatttcaaaatagtcgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaccagcttt 40851131  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  40851132 tgaagctttaagttccatctcctgatgaactgtagcttctggtgatacacaacttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 40851231  T
Q  200 gtctttagga 209  Q
    ||||| ||||    
T  40851232 gtcttcagga 40851241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 30054304 - 30054103
Alignment:
Q  8 gaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctt 107  Q
    ||||||||| ||||||| ||||||| ||| |||||| ||||||||| ||||||||||||| ||||| |||||||||| ||||||||| ||||||||||||    
T  30054304 gaataagcacccaatgcctttcaaagtagtcgttgctatacttttcaagtcttctgcaattttaggcgagtttgaattcttgaaacagcttttgaagctt 30054205  T
Q  108 taagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttag 207  Q
    | | |||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| ||    
T  30054204 tgaattgcatctcctgatgaactgaagtttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactttgtcttcag 30054105  T
Q  208 ga 209  Q
    ||    
T  30054104 ga 30054103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 21605749 - 21605572
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| | |||| ||||| || ||||||||||||||||    
T  21605749 ctttgaagaataagcatccaatgcatttcaaaatagtcgttgtcatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttt 21605650  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||| |||||||||||| |||||||    
T  21605649 tgaagctttaagttccatctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgcttatgatgac 21605572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 21636765 - 21636588
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| ||||| || ||||||||||| ||||    
T  21636765 ctttgaagaataagcatccaatgcatttcaaaatagtcgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacagcttt 21636666  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    |||||||||||||| || |||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||    
T  21636665 tgaagctttaagttccaactcctgatgaactgccacttctggtgatacacagcttctgatgaacttgcttctgatgac 21636588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 49666475 - 49666277
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    ||||||||||| |||||  ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49666475 tttcaaaatagtcgttgttatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 49666376  T
Q  126 gaactgcagcttctggtgattcaca---------------gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||||               |||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  49666375 gaactgcagcttctggtgattcacaacttatgatgaaattgcttctgatgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 49666277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 21640968 - 21641108
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 128  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21640968 caaaatagccgttgctatacttttccagtcttctacaatcttaggcgagtttgaatccttgaaacagcttttgaggctttaagttgcatctcctgatgaa 21641067  T
Q  129 ctgcagcttctggtgattcacagcttctaatgaacttgctt 169  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  21641068 ctgcaacttctggtgattcacagcttctgatgaacttgctt 21641108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 2561286 - 2561500
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||  |||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  2561286 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 2561385  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    ||||||||  ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| |||| || || ||||||    
T  2561386 gatgaactagagcttctggtgattctcagcttctgatgaacttgcttctgatgatgtcaccacttcaagagcactttgtcttcaggagcagttctcttca 2561485  T
Q  223 gacgctttaagcttc 237  Q
    |||||||||||||||    
T  2561486 gacgctttaagcttc 2561500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 11223661 - 11223873
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   |||||| |||||||||||||||  |||  ||| ||||| || |  |||| |||||||||||  |||||| |||||||||    
T  11223661 tttcaaaatagtcgttgcttcactttttcagtcttctgcaatgcatagacgagattgaacccattgaacagcttttgaagctcaaagttgtatctcctga 11223760  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||| |||||||||||||  ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| || || ||||||||    
T  11223761 tgaactgctgcttctggtgattttcagattctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttctcttcaga 11223860  T
Q  225 cgctttaagcttc 237  Q
     ||||||| ||||    
T  11223861 tgctttaaacttc 11223873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 1728108 - 1727859
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta-ggtgagtttgaatccttgaaacaacttttg 101  Q
    |||| ||||||||||||||||| |||||||||||||||||  | ||||| | |||||| |||||| ||  || ||| |||||||||||||||||||||||    
T  1728108 ttgaggaataagcatccaatgcttttcaaaatagccgttgtta-actttccaagtcttttgcaattttctggcgagattgaatccttgaaacaacttttg 1728010  T
Q  102 aagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaactt---------------gcttctgatgacgtcaccact 186  Q
    || || ||||||  |||||||||||||||||||||||||||||| |||||||||| ||||||||               |||||||||||||||| ||||    
T  1728009 aaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttttgatgaactagcttctgatgacgtcatcact 1727910  T
Q  187 tcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    | || ||||||||||||| |||| || |||||||||||| |||||||||||    
T  1727909 ttagaagcactttgtcttcaggagcacttttcttcagacactttaagcttc 1727859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 2785163 - 2785314
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||   ||||||||||||||||||||| || ||  |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  2785163 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagttgcatctcctga 2785262  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||| || ||||||||||||| ||||||||||| ||||||||||||||||    
T  2785263 tgaactacaacttctggtgattctcagcttctaataaacttgcttctgatga 2785314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 47207802 - 47207991
Alignment:
Q  24 catttcaaaatagccgttgccatacttttccagtcttctgcaatg--ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcc 121  Q
    ||||||||| ||||||||||   ||||||||||||||||||||||  ||||  ||| || ||||| |  |||||| ||||||| |||| |||||||||||    
T  47207802 catttcaaactagccgttgcttcacttttccagtcttctgcaatgctttagacgagattaaatccattgaacaacctttgaagttttatgttgcatctcc 47207901  T
Q  122 tgatgaactgcagcttctggtgattcacagcttctaatgaactt--gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||||  |||||||| ||||| ||  |||||||||||||||||||||||| |||||| ||||||| ||||    
T  47207902 tgatgaactgcagcttctggtgattttcagcttctgatgaagttcagcttctgatgacgtcaccacttcaagagcaccttgtcttcagga 47207991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 26 - 201
Target Start/End: Original strand, 11869166 - 11869342
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   ||||||||||||||||| | |  ||||  ||| |||||| | | |||||| ||||||||| |||||||||||| |||||    
T  11869166 tttcaaactagacgttgcttcacttttccagtcttctgtatttcttagacgagattgaattcattaaacaaattttgaagccttaagttgcatcccctga 11869265  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgt 201  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  11869266 tgaactgcagcttctggtgattttcagcttctgatgaaattgcttctgatgacatcaccacttcaggagcactttgt 11869342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 14955525 - 14955676
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||  ||| |||||||||||||||||| || ||  |||||||||||| | ||||| ||||||||||||| |||| ||||||||||    
T  14955525 tttcaaaatagttgttgctttacctttccagtcttctgcaatctttagacgagtttgaatccattaaacagcttttgaagctttgagttacatctcctga 14955624  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||| ||||||||||||| |||||||| || ||||||||||||||||    
T  14955625 tgaactgcaacttctggtgattctcagcttctgataaacttgcttctgatga 14955676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 24775595 - 24775442
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||   ||||||||||||||||||||| || ||  |||||||||||| | ||||| |||||||||||||||||||||||||||||    
T  24775595 tttcaaaatagttgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctga 24775496  T
Q  125 tgaact--gcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||  ||||||||||||||||| |||||| | || |||||| |||||||||    
T  24775495 tgaactgcgcagcttctggtgattctcagcttgtgataaacttggttctgatga 24775442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 161
Target Start/End: Complemental strand, 20627471 - 20627356
Alignment:
Q  47 acttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||||||  ||||  |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20627471 acttttccagtcttctgcaatcattagacgagtttgaatccattaaacatcttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgat 20627372  T
Q  146 tcacagcttctaatga 161  Q
    |  |||||||| ||||    
T  20627371 tttcagcttctgatga 20627356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 46349905 - 46349754
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   |||||||||||||||||||||| ||||  ||| ||| |||  |  ||||||||||||||  ||||||||| ||||||||    
T  46349905 tttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattggatcaattgaacaacttttgaagtcttaagttgcttctcctga 46349806  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  46349805 tgaactgcaacttctggtgattttcagcttctaatgaacttgcttctgatga 46349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 15833550 - 15833671
Alignment:
Q  90 aaacaact-tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac-ttgcttctgatgacgtcaccactt 187  Q
    |||||||| |||||| ||||| ||||||||| ||||||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||||| |||||    
T  15833550 aaacaactatttgaaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtcatcactt 15833649  T
Q  188 caggagcactttgtctttagga 209  Q
    |||  |||||||||||| ||||    
T  15833650 cagaggcactttgtcttcagga 15833671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 229
Target Start/End: Original strand, 14969425 - 14969632
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||  |||||  |||| |||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||| ||||    
T  14969425 tttcaaaatagttgttgctttactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcct 14969524  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttc 221  Q
     |||||||  |||||||||||||   |||| ||| |||||||||||| ||||||||||| |||||||||||||| |||||||| |||| | ||| |||||    
T  14969525 catgaactagagcttctggtgatcttcagcatctgatgaacttgcttatgatgacgtcatcacttcaggagcacttttgtcttaaggagcgattctcttc 14969624  T
Q  222 agacgctt 229  Q
    ||| ||||    
T  14969625 agatgctt 14969632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 9700129 - 9699989
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta-ggtgagtttgaatccttgaaacaacttttg 101  Q
    |||| ||||||||||||||||| ||||||||||| |||||  | ||||| | ||||||||||||| ||  || ||| |||||||||||||||||||||||    
T  9700129 ttgaggaataagcatccaatgcttttcaaaatagtcgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaacaacttttg 9700031  T
Q  102 aagctttaagttgcatctcctgatgaactgcagcttctggtga 144  Q
    |||||||| |||| |||| ||||||| ||||||||||||||||    
T  9700030 aagctttaggttg-atcttctgatgatctgcagcttctggtga 9699989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 28582347 - 28582433
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| || || |||||||||| ||||||||||    
T  28582347 gcttctgatgaacttgcttctgatgacgtcaccacttcaggagcactttgtcttcaggagcagttctcttcagacgttttaagcttc 28582433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 53056788 - 53056561
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   ||||||||||||||||||||| || ||  ||  |||||||| | ||||| |||||||| | |||||||||||| | |||    
T  53056788 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgatgttgaatccattaaacagcttttgaaaccttaagttgcatcccatga 53056689  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttg---------------cttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||| ||||||    |||||| || ||||||               |||||||||||||||||||||||||||||||||||||| ||||    
T  53056688 tgaactgcagcttctagtgatttttggcttctgataaacttgtttttgatgaactaacttctgatgacgtcaccacttcaggagcactttgtcttcagga 53056589  T
Q  210 acaattttcttcagacgctttaagcttc 237  Q
     || ||||||||| ||||||||||||||    
T  53056588 gcagttttcttcaaacgctttaagcttc 53056561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 5213677 - 5213789
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    ||||||||  ||||| ||||||||||||||||||||||| || |   |||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  5213677 caaaatagttgttgctatacttttccagtcttctgcaatctttatacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatga 5213776  T
Q  128 actgcagcttctg 140  Q
    ||| |||||||||    
T  5213777 actacagcttctg 5213789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 10529499 - 10529611
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac-ttgcttctgatgacgtcaccacttcaggagcac 196  Q
    |||||| ||||| ||||||||| ||||||| ||| ||||||||||||| |||||||||| |||||| |||||||||||||||||| ||||||||  ||||    
T  10529499 tttgaaactttaggttgcatcttctgatgagctgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtcatcacttcagaggcac 10529598  T
Q  197 tttgtctttagga 209  Q
    |||||||| ||||    
T  10529599 tttgtcttcagga 10529611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 18142703 - 18142619
Alignment:
Q  150 agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagc 234  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||| |||||||||||    
T  18142703 agcttctgatgaacttgcttctgatgacgtcaccacttcaggaacactttgtcttcaggagcagttttcttcaaacgctttaagc 18142619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 18121533 - 18121454
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||| |||| || || |||||||||||||||||||||    
T  18121533 atgaacttgcttctgatgatgtcaccacgtcaggagcactttgtcttcaggagcagttctcttcagacgctttaagcttc 18121454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 237
Target Start/End: Complemental strand, 12963072 - 12962934
Alignment:
Q  99 ttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac 196  Q
    ||||||||||||||  |||||||||||||||||| || |||||||||||     |||||| |||||||||||||||||||||||| ||||||| ||||||    
T  12963072 ttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcaagagcac 12962975  T
Q  197 tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||| ||| |  | || || ||||||||||||| |||||||    
T  12962974 tttgacttcaatagcacttctcttcagacgcttcaagcttc 12962934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 237
Target Start/End: Complemental strand, 47405459 - 47405284
Alignment:
Q  49 ttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattc 147  Q
    |||||||||||||||||||| ||||  ||| || ||||| |  |||| | |||||||||||| |||||||||| |||||||||||||||||||||||||     
T  47405459 ttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgttgcatctcgtgatgaactgcagcttctggtgattt 47405360  T
Q  148 acagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
     ||               ||||||||||||||||  ||||||||||||| |||||||| |||| || ||||||||||||||||||||||||    
T  47405359 tca---------------gcttctgatgacgtcattacttcaggagcacttttgtcttcaggagcagttttcttcagacgctttaagcttc 47405284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 20646395 - 20646481
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||||||| ||||||| || ||||||| ||| |||| || || |||||| ||||||||||||||    
T  20646395 gcttctgatgaacttgcttctgatgacgtcatcacttcatgaacactttgacttcaggagcacttctcttcaaacgctttaagcttc 20646481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 22140891 - 22140977
Alignment:
Q  55 agtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctg 140  Q
    |||||||||||||  ||||| |||||||||||| |  |||| |||||||| ||||||||||||||||||||||||||| ||||||||    
T  22140891 agtcttctgcaatccttaggcgagtttgaatccgttgaacagcttttgaaactttaagttgcatctcctgatgaactgtagcttctg 22140977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 161
Target Start/End: Original strand, 40799994 - 40800108
Alignment:
Q  48 cttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgatt 146  Q
    ||||||||||||||||||||| ||||  ||| || ||||| |  |||| | |||||||||||| | |||||||| |||||||||||||||||||||||||    
T  40799994 cttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgatgcatctcttgatgaactgcagcttctggtgatt 40800093  T
Q  147 cacagcttctaatga 161  Q
      |||||||| ||||    
T  40800094 ttcagcttctgatga 40800108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 52920645 - 52920731
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||  ||| |||| || || |||||||| |||| |||||||    
T  52920645 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttacttcaggagcacttctcttcagatgcttcaagcttc 52920731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 15903441 - 15903525
Alignment:
Q  153 ttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||||| ||| |||| || || |||||||| |||| |||||||    
T  15903441 ttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttgacttaaggagcacttctcttcagatgcttcaagcttc 15903525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 33583328 - 33583480
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatcct-tgaaacaacttttgaagctttaagttgcatctcctg 123  Q
    ||||||||||||||||||   |||||||||||||||| ||||  ||||   || ||||||||  | |||||||||||||||| ||||||||||||  |||    
T  33583328 tttcaaaatagccgttgcttcacttttccagtcttctacaatccttagacaaggttgaatcccataaaacaacttttgaagccttaagttgcatcctctg 33583427  T
Q  124 atgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||| || ||| ||||||||   ||||||| ||  |||||||||||||||    
T  33583428 atgaactacaacttttggtgatttttagcttctgatagacttgcttctgatga 33583480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 37412679 - 37412840
Alignment:
Q  11 taagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaa 110  Q
    |||||||||||||| ||||||||||||||||| || ||||| | ||  ||||||||  | ||| ||| |||||||||||||||| |||||||| |||||     
T  37412679 taagcatccaatgcttttcaaaatagccgttg-caaactttccaagatttctgcaacttcaggcgagcttgaatccttgaaacagcttttgaaactttag 37412777  T
Q  111 gttgcatctcctgatgaactgcagcttctggtgattcac-agcttctaatgaacttgcttctgatga 176  Q
     ||| |||| ||||| | ||||||||| ||||||   || ||||||| || ||||||||||||||||    
T  37412778 attg-atcttctgataatctgcagcttttggtga---actagcttctgataaacttgcttctgatga 37412840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 31303626 - 31303715
Alignment:
Q  151 gcttctaatgaacttgcttctgat---gacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||   ||||||| |||||||||||||||||| ||| |||| || || |||||||| ||||||||||||    
T  31303626 gcttctgatgaacttgcttctgatgatgacgtcatcacttcaggagcactttgacttcaggagcacttctcttcagatgctttaagcttc 31303715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 49642823 - 49642685
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||  |  |||||| |||||||||||||||  ||||||||||    
T  49642823 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatctattgaacaacctttgaagctttaagtcttgcatctcct 49642724  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatga 161  Q
    |||||||| || |||||||||||   |||||||||||||    
T  49642723 gatgaactacaacttctggtgatcttcagcttctaatga 49642685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 16199730 - 16199645
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||||||| || ||||||||||| ||| ||| |||| || ||||||||||| |||| |||||||    
T  16199730 gcttcttatgaacttgcttctgatgacgtcatcagttcaggagcac-ttgacttcaggagcacttttcttcagatgcttcaagcttc 16199645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 41495214 - 41495300
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||| ||| ||||||| |||||||||| ||| || | || || |||||||| ||||||||||||    
T  41495214 gcttctgatgaacttgcttctgatgacatcatcacttcatgagcactttgacttcagaagcacttctcttcagatgctttaagcttc 41495300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 50300441 - 50300499
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||||||| ||||    
T  50300441 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcactttgtcttcagga 50300499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 13824272 - 13824320
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  13824272 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 13824320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 14392918 - 14392839
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||| ||||||||||||||||||| |||||||||||||||||  ||| |||| || || |||||||| |||| |||||||    
T  14392918 atgatcttgcttctgatgacgtcatcacttcaggagcactttaacttcaggagcacttctcttcagatgcttcaagcttc 14392839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 46349749 - 46349706
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  46349749 gcttctgatgacgtcaccacttcaggagcactttgtcttcagga 46349706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 13948576 - 13948662
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| || ||||||||||||||||||||| ||||||| ||||| |||| ||| | || || || |||||||| ||||||||||||    
T  13948576 gcttctgataaacttgcttctgatgacgtcatcacttcatgagcattttgacttcaagagcacttctcttcagatgctttaagcttc 13948662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 14955681 - 14955739
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| |||| |||||||||||||||||||  ||||||||||||||||||||| ||||    
T  14955681 gcttctgatgaccttgcttctgatgacgtcattacttcaggagcactttgtcttcagga 14955739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 17238860 - 17238787
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||| |||| || || |||||||||||||||||||||    
T  17238860 cttgcttctgatgacgtcatcacttcagaagcac-ttgacttcaggagcacttctcttcagacgctttaagcttc 17238787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 29855649 - 29855707
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| ||||||| |||||||||||||| |||||||||| ||||||||||||| ||||    
T  29855649 gcttctgatgaactcgcttctgatgacgtaaccacttcagaagcactttgtcttcagga 29855707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 33583485 - 33583543
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| | ||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  33583485 gcttctgacgaacttgtttctgatgacgtcatcacttcaggagcactttgtcttcagga 33583543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 33598014 - 33598100
Alignment:
Q  90 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||||||||||| ||||||||||||  |||||||||| || ||| ||||||||   ||||||| ||  |||||||||||||||    
T  33598014 aaacaacttttgaagccttaagttgcatcctctgatgaactacaacttttggtgatttttagcttctgatagacttgcttctgatga 33598100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 33598105 - 33598163
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| | ||||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  33598105 gcttctgacgaacttgtttctgatgacgtcatcacttcaggagcactttgtcttcagga 33598163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 37467554 - 37467628
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||| |||||||||||| ||||| ||| |||| || || |||||||| |||| |||||||    
T  37467554 cttgcttctgatgacgtcatcacttcaggagctctttgacttcaggagcacttatcttcagatgcttcaagcttc 37467628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 50300373 - 50300451
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||   | ||| | || ||||||||||||||||    
T  50300373 tttgaagccttaagttgcatcctctgatgaactgcagcttctggtgatttttaacttatgataaacttgcttctgatga 50300451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 9699991 - 9699946
Alignment:
Q  159 tgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||    
T  9699991 tgaacttgcttctgatgacgtcaacacttcagaagcactttgtctt 9699946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 12388770 - 12388729
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  12388770 atgaacttgcttctgatgacgtcatcacttcaggagcacttt 12388729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 16658551 - 16658479
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcacttt-gtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||| ||||||| ||||| ||| ||||| |||| || || |||||||||||||||||||||    
T  16658551 gcttctgatgacgtcatcacttcatgagcatttttgtcttcaggagcacttctcttcagacgctttaagcttc 16658479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 24775437 - 24775385
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtct 203  Q
    |||||| |||||||||||||||||||| ||| |||||||| ||||||||||||    
T  24775437 gcttctgatgaacttgcttctgatgacatcatcacttcagaagcactttgtct 24775385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 6090979 - 6091058
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||||||||  |||||| |||||||||  ||| |||| || || |||||||| |||| |||||||    
T  6090979 atgaacttgcttctgatgacgtcataacttcatgagcactttaacttcaggagcacttctcttcagatgcttcaagcttc 6091058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 13977937 - 13978000
Alignment:
Q  147 cacagcttctaatgaactt-gcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||  |||||||||||| ||||    
T  13977937 cacagcttctgatgaactttgcttctgatgacgtcatcacttcagaggcactttgtcttcagga 13978000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 25398194 - 25398147
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||    
T  25398194 gcttctgatgaacttgcttctgatgacgtcgtcacttcaggagcactt 25398147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 29951357 - 29951310
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  29951357 gcttctgatgaacttgcttctgaagacgtcatcacttcaggagcactt 29951310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 30000511 - 30000464
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||| ||||||| ||||||||||||||||    
T  30000511 gcttctgatgaacttgcttctgaagacgtcatcacttcaggagcactt 30000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 37467431 - 37467553
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagtt--gcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||| ||||| |||| |||| || ||||| |  |||||  ||||||| ||||||||  |||||||||    
T  37467431 tttcaaaatagtcgttgcttcactcttccagtcttctacaatgcttagatgagattaaatccattgaacaagctttgaagatttaagttttgcatctcct 37467530  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    |||||||| | ||||||||||||    
T  37467531 gatgaactactgcttctggtgat 37467553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 28582204 - 28582341
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| ||||| ||||||||||||  |||  ||| || ||||| |  |||| | |||||||||||||||  ||||||||||    
T  28582204 tttcaaaatagtcgttgcttcactcttccaatcttctgcaatgcatagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcct 28582303  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatg 160  Q
    |||||| |  ||||||||||||||  ||||||||||||    
T  28582304 gatgaaatagagcttctggtgattttcagcttctaatg 28582341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 29855537 - 29855659
Alignment:
Q  55 agtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagct 153  Q
    ||||||||||||| || ||  ||| |||||||| | ||||| |||||||||  |||||||||||| | ||||||||||||| || ||||||||    |||    
T  29855537 agtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagtcttaagttgcatcccatgatgaactgcaggttttggtgatttttggct 29855636  T
Q  154 tctaatgaacttgcttctgatga 176  Q
    ||  || ||||||||||||||||    
T  29855637 tccgataaacttgcttctgatga 29855659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 2785319 - 2785372
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    |||||| |||| |||||||| |||||||||| ||||||||||||||||| ||||    
T  2785319 gcttctgatgaccttgcttcagatgacgtcatcacttcaggagcactttatctt 2785372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 40800098 - 40800131
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||||||||||||||||||||||||||||||||    
T  40800098 gcttctgatgacgtcaccacttcaggagcacttt 40800131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 2785370 - 2785422
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| |||| |||| |||| ||||||| ||||||||||||||||||||||||    
T  2785370 cttcatgagcgctttatcttcaggaacagttttcttcagacgctttaagcttc 2785422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 9380434 - 9380370
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||||||||||||  ||| || | || ||||||||||| ||||    
T  9380434 tgcttctgatgacgtcatcacttcaggagcactttagcttcagaagcagttttcttcagatgctt 9380370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 29855700 - 29855752
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  29855700 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 29855752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 6090898 - 6090952
Alignment:
Q  93 caacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||| ||||||| |||||||  |||||||||||||||||| ||||||||||||||    
T  6090898 caacctttgaagttttaagtcttgcatctcctgatgaacttcagcttctggtgat 6090952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 18121683 - 18121561
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||||  |||||   ||| |||||||||||||||||| | |   ||| |||||||| |  |||||| ||||||||||||| |  ||||||||||    
T  18121683 tttcaaaatagttgttgcttcactcttccagtcttctgcaatgctcaaacgagattgaatccattgaacaacctttgaagctttaaatcttgcatctcct 18121584  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  |||||||||||||    
T  18121583 gatgaactagagcttctggtgat 18121561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 13954205 - 13954267
Alignment:
Q  90 aaacaact-tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacag 151  Q
    |||||||| |||||| ||||| ||||||||| || |||||||| ||||||||||||| |||||    
T  13954205 aaacaactatttgaaactttaggttgcatcttctcatgaactgtagcttctggtgatacacag 13954267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 21641113 - 21641163
Alignment:
Q  159 tgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||| ||||    
T  21641113 tgaacttgcttctgatgatgtcatcactttatgagcactttgtcttcagga 21641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 52920576 - 52920625
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| ||||||||  |||||||||||||||||| ||||||||||||||    
T  52920576 tttgaaactttaagtcttgcatctcctgatgaacttcagcttctggtgat 52920625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 15851172 - 15851217
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||    
T  15851172 ttgcttctgatgacgtcatcacttcagaggcactttgtcttcagga 15851217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 198
Target Start/End: Original strand, 23636150 - 23636183
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||| ||||||||||||||||    
T  23636150 tgcttctgatgacgtcatcacttcaggagcactt 23636183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 37412859 - 37412904
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||    
T  37412859 ttgcttctgatgacgtcatcacttcagaggcactttgtcttcagga 37412904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 14955732 - 14955784
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||  |||| || ||||||||||||||||||||||||    
T  14955732 cttcaggagcgctttatctgcaggagcagttttcttcagacgctttaagcttc 14955784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 19249318 - 19249246
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||| ||||||||||||| ||   ||| || | || ||||||||||| |||| |||||||    
T  19249318 tgcttctgatgacgtcatcacttcaggagcatttgaacttcagaaccacttttcttcagatgcttcaagcttc 19249246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 20646324 - 20646375
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    ||||| |||||||||||  |||||||||||||||||| || |||||||||||    
T  20646324 cttttaaagctttaagtcttgcatctcctgatgaactacaacttctggtgat 20646375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 37886001 - 37886061
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| |||||||| |||||||   ||| |||| || |||||||||||    
T  37886001 ttgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcaga 37886061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 49 - 237
Target Start/End: Complemental strand, 23551 - 23363
Alignment:
Q  49 ttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattca 148  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23551 ttttccagtcttctgcaatcttagacgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattca 23452  T
Q  149 cagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||| |||||||||||| ||||||||| | |||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  23451 cagcttctgatgaacttgcttttgatgacgttatcacttcaggagcactttgtcttcaggagcagttttcttcagacgctttaagcttc 23363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 2738 - 2511
Alignment:
Q  11 taagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaa 110  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||     
T  2738 taagcatccaatgcttttcaaaatagccgttgctatacttttccagtcttctgcaattttaggcgagtttgaatccttgaaacagcttttgaaactttag 2639  T
Q  111 gttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt-tgtctttagga 209  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||  | ||| || |    
T  2638 gttgcatttcctgatgaactgcagtttctggtgatttacagcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttcagacttcagaa 2539  T
Q  210 acaattttcttcagacgctttaagcttc 237  Q
     || ||||||||||||||||||| ||||    
T  2538 gcagttttcttcagacgctttaatcttc 2511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 17811 - 17603
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||  ||||||||||||| ||||  |||||||||||||||||||| |||||    
T  17811 ctttgaaggataagcatccaatgcctttcaaaatagacgttgctatacttttgtagtcttctgcaatcttagacgagtttgaatccttgaaacagctttt 17712  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    |||||||||||||| ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  17711 gaagctttaagttgtatctcctgatgaattgaagcttctggtgattcacagcttctgatgaacttgcttctgatgacgtcatcacttcaggatcactttg 17612  T
Q  201 tctttagga 209  Q
    |||| ||||    
T  17611 tcttcagga 17603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 132; Significance: 1e-68; HSPs: 4)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 9659 - 9842
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    ||||||||||| |||||| ||||||| ||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9659 tttcaaaatagtcgttgctatactttcccagtcttctgcaatcttagacaagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 9758  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| ||||||| |||||||||||||| ||||    
T  9759 gaactgcagcttctggtgattcacagcttatgatgaacttgcttctgatgacatcatcacttcatgagcactttgtcttcagga 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 22136 - 21992
Alignment:
Q  33 atagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactg 131  Q
    |||| |||||| |||||| |||||||||||||||| || ||  |||||| ||||||| |||||||||||||| ||||||||||||||| || |||||||     
T  22136 atagtcgttgctatacttctccagtcttctgcaatctttagacgagttttaatcctttaaacaacttttgaacctttaagttgcatcttctaatgaacta 22037  T
Q  132 cagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    || |||||||||||||||||||||| || ||||||||||||||||    
T  22036 caacttctggtgattcacagcttctgataaacttgcttctgatga 21992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 204
Target Start/End: Original strand, 19133 - 19311
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctgat 125  Q
    |||||||||||||||   ||| |||||||||||||||||| || |  ||| || ||||| |  |||| | ||| |||||||||||  || ||| ||||||    
T  19133 caaaatagccgttgcttcactcttccagtcttctgcaatgctttgacgagattaaatccattgaacagcctttcaagctttaagtcttgtatcacctgat 19232  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||| |  |||||||||||||   || ||||| || |||||||||||||||||| ||| |||||||||||||||||||||    
T  19233 gaaatagagcttctggtgatcttcaacttctgataaacttgcttctgatgacgacacaacttcaggagcactttgtctt 19311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 21987 - 21901
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||| ||||||||||||||||||| ||||||||| |||||||||||| |||| || | ||||||||||  ||||||||||    
T  21987 gcttctgatgaccttgcttctgatgacgtcatcacttcaggtgcactttgtcttcaggagcagtattcttcagacattttaagcttc 21901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 21121080 - 21120875
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||| || | |||||||||| || ||||||||||| ||||    
T  21121080 ctttgaagaataagcatccaatgcatttcagaatagtcgttgccatatttttccagtcttctgcgatttctaggtgagttagagtccttgaaacagcttt 21120981  T
Q  100 tgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||  ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| |||||||| |||||||    
T  21120980 tgaaaactttaagttccatctcctgatgaactgcagcttctggtgatacacagcttctgatgaatttgcttctgatgacgtcatcacttcagaagcactt 21120881  T
Q  199 tgtctt 204  Q
    ||||||    
T  21120880 tgtctt 21120875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 46089053 - 46089229
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| ||||    
T  46089053 ctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatacttttccagtcttctgcaatttttaggcgagtttgaatccttgaaacagcttt 46089152  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||| ||| | |||||||||||||||||||    
T  46089153 tgaagctttaagttgcatctcatgatgaactgcagcttctggtgatacacaacttatgatgaacttgcttctgatga 46089229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 21984660 - 21984898
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||| | |||| ||||| || ||||||||||||||||    
T  21984660 ctttgaagaataagcatccaatgcatttcaaaatagctgtttccatacttttccagtgttctgcaatatctaggcgagttagagtccttgaaacaacttt 21984759  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt- 198  Q
    |||  ||||||||| | ||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |||| ||     
T  21984760 tgacactttaagttccctctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcaattc 21984859  T
Q  199 tgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
       ||| |||| || |||||||||||||||| |||||||    
T  21984860 aaacttcaggagcagttttcttcagacgcttaaagcttc 21984898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 21135176 - 21134971
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| ||| | |||||||||| || ||||||||||||||||    
T  21135176 ctttgaagaataagcatccaatgcatttcagaatagctgttgccatatttttccagtcttctgtaatttctaggtgagttagattccttgaaacaacttt 21135077  T
Q  100 tgaag-ctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||  ||||||||| ||||||||||||||||||| ||||||||||| |||| ||||| |||||||||||||||||||||||| || ||||| |||||||    
T  21135076 tgaaaactttaagttccatctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgcttctgatgacgtcatcatttcagaagcactt 21134977  T
Q  199 tgtctt 204  Q
    ||||||    
T  21134976 tgtctt 21134971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10251050 - 10251218
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaactttt 100  Q
    |||||||||||||||||||||||| || |||| |||||||||  ||||||||||||||||||||||| ||||  |||||||||||||| |||||||||||    
T  10251050 ctttgaagaataagcatccaatgccttccaaattagccgttgttatacttttccagtcttctgcaatcttagacgagtttgaatcctttaaacaactttt 10251149  T
Q  101 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgctt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  10251150 gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcatagcttctgatgaacttgctt 10251218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 42284692 - 42284899
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||| ||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||| || ||| ||||| || ||||||||||| ||||    
T  42284692 ctttgaagaaaaagcatccaatgcatttcaaaatagtcgt-gccacaattttccagtcttctgcaatctttaggcgagttagagtccttgaaacagcttt 42284790  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||  ||||||||  |||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  42284791 tgaaaatttaagttcaatcttctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatgacgtcatcacttcagaagcacttt 42284890  T
Q  200 gtctttagg 208  Q
    |||||||||    
T  42284891 gtctttagg 42284899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 26 - 176
Target Start/End: Original strand, 21702912 - 21703062
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    |||||||||||||||||| ||||||||| ||||||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21702912 tttcaaaatagccgttgctatacttttcaagtcttctgcaatcttagacgagtttgaatccttgaaacaaattttgaagctttaagttgcatctcctgat 21703011  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  21703012 gaactgcagcttctggtgattcacagcttctgatgtacttgcttctgatga 21703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 21204939 - 21204765
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||| || ||||||||||||||||    
T  21204939 ctttgaagaattaacatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttctaggcgagttagagtccttgaaacaacttt 21204840  T
Q  100 t-gaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctga 173  Q
    |  || ||||||||| |||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  21204839 taaaaactttaagttccatctcttgatgaactgcagcttctggtgatacacaacttctgatgaacttgcttctga 21204765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 44821524 - 44821351
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| |||||||| ||||||||| |||   ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44821524 caaaatagtcgttgctatactttttcagtcttctacaaaccttagacgagtttgaatcctttaaacaacttttgaagctttaagttgcatctcctgatga 44821425  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgt 201  Q
    ||| |||||| ||||||||| |||||||| || ||||||||||||||||||||| |||||||||||||||||||    
T  44821424 actacagcttatggtgattctcagcttctgataaacttgcttctgatgacgtcatcacttcaggagcactttgt 44821351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 35040264 - 35040476
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||  |||||||| ||||||||||||| || ||  ||| ||| |||| | |||||||||||||||| |||||||||||| | |||    
T  35040264 tttcaaaatagtcgttgctttacttttctagtcttctgcaatctttagacgaggttggatccattaaacaacttttgaagccttaagttgcatcccatga 35040363  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||| |||||||||||||||||    |||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||| || |||||||||||    
T  35040364 tgaattgcagcttctggtgatttttggcttctgataaacttgcttctgatgacgtcaccacttcatgagcactttgtcttcaggagcagttttcttcaga 35040463  T
Q  225 cgctttaagcttc 237  Q
    |||||||||||||    
T  35040464 cgctttaagcttc 35040476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 37642312 - 37642522
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||| ||| ||||||||||||| ||| | |||| ||||| || ||||||||||| ||||    
T  37642312 ctttgaagaattagcatccaatgcatttcaaactagctgttgccacactcttccagtcttctgtaatttctaggcgagttagagtccttgaaacagcttt 37642411  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac-ttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||| |||| ||||  || |||||||||||||||||||||||||||  | ||||||| |||||| |||||||| ||||||||| |||||||| |||||||    
T  37642412 tgaaactttgagttcaatttcctgatgaactgcagcttctggtgatatatagcttctgatgaactttgcttctaatgacgtcatcacttcagaagcactt 37642511  T
Q  199 tgtctttagga 209  Q
    |||||| ||||    
T  37642512 tgtcttcagga 37642522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 2834788 - 2834971
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||||||||||   |||||| ||||||||  ||||| ||||  ||| |||||||| |  ||||||||| ||||||||||||||||||||| ||    
T  2834788 tttcaaattagccgttgcttcactttttcagtcttcaacaatgcttagacgagattgaatccattgaacaactttggaagctttaagttgcatctcccga 2834887  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2834888 tgaactgcagcttctggtgattttcagcttctaatg-acttgcttctgatgacgtcaccacttcaggagcactttgtcttcagga 2834971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 30572295 - 30572430
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    |||||||||||||||||| ||||||||||||||||||||||| | ||  |||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  30572295 tttcaaaatagccgttgctatacttttccagtcttctgcaatctcagacgagtttgaatccttgaaacagctattgaagctttaagttgtatctcctgat 30572394  T
Q  126 gaactgcagcttctggtgattcacagcttctaatga 161  Q
    |||||||| |||||||||||||||| ||||| ||||    
T  30572395 gaactgcaacttctggtgattcacaacttctgatga 30572430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 26 - 237
Target Start/End: Complemental strand, 32785919 - 32785706
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||| ||| ||||||   |||||||||||||||||||||| ||||  ||| || ||||| |||| |||| |||||||||||||||  |||||||| |    
T  32785919 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccatgaa-caacctttgaagctttaagtcttgcatctcat 32785821  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttca 222  Q
    |||||||| || ||||| ||||||  ||||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||| |||| || |||||||||    
T  32785820 gatgaactacaacttctagtgattttcagcttctaatgaacttgcttctaatgacgttaccacttcaggggcactttgccttcaggagcagttttcttca 32785721  T
Q  223 gacgctttaagcttc 237  Q
    |||||||||||||||    
T  32785720 gacgctttaagcttc 32785706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 39200974 - 39200795
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||||||||||   ||| || ||||||||||||||| |||  |||| || ||||| |  |||| |||||||||||||| |||||||||||| |    
T  39200974 tttcaaactagccgttgcttcactctttcagtcttctgcaatgcttacatgagattaaatccattgaacagcttttgaagctttatgttgcatctcctaa 39200875  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||||||| ||||||||  |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  39200874 tgaactgcagcttttggtgattttcagcttttgatgaacttgcttttgatgacgtcaccacttcaggagcactttgtctt 39200795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 48570247 - 48570063
Alignment:
Q  1 ctttgaagaataagcatccaatgcattt---------caaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaa 91  Q
    |||||||||||||||||||||||| |||         |||||||| |||||  ||||||||| ||||||||||||| ||||  |||||||||||| | ||    
T  48570247 ctttgaagaataagcatccaatgccttttaatccttccaaaatagtcgttgttatacttttctagtcttctgcaatcttagacgagtttgaatccgttaa 48570148  T
Q  92 acaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||| |||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||||| || || |||||| ||||||    
T  48570147 acagcttttgaaactttaagttgcatctcctgatgaattacagcttctggtgattctcagcttctgataaaattgcttatgatga 48570063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 19215678 - 19215881
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttg 101  Q
    |||| ||||||||||| ||||| |||||||||||||||||  | ||||| | ||||||||||||| ||  || ||| |||||||||||||||| ||||||    
T  19215678 ttgaggaataagcatcaaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaacagcttttg 19215776  T
Q  102 aagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgt 201  Q
    ||||||||  ||| |||| ||||||| |||||||||||||||| |    |||||| ||||| ||||||||||||||| || |||||||| ||||||||||    
T  19215777 aagctttagattg-atcttctgatgatctgcagcttctggtgaat--ttgcttctgatgaatttgcttctgatgacgacatcacttcagaagcactttgt 19215873  T
Q  202 ctttagga 209  Q
    ||| ||||    
T  19215874 cttcagga 19215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 176
Target Start/End: Complemental strand, 2327400 - 2327270
Alignment:
Q  47 acttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| ||||| |||||||| || ||  |||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2327400 actttttcagtcatctgcaatctttagacgagtttgaatctattaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 2327301  T
Q  146 tcacagcttctaatgaacttgcttctgatga 176  Q
    |    |||||| || ||||||||||||||||    
T  2327300 ttttggcttctgataaacttgcttctgatga 2327270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 25448548 - 25448395
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| || |||   ||||||||||||||||||||| || ||  |||||||||||| | ||||| |||||||||||||||||||||||| ||||    
T  25448548 tttcaaaatagtcgctgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatcttctga 25448449  T
Q  125 tgaact--gcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||||  ||||||||| ||||||| |||||||| || ||||||||| ||||||    
T  25448448 tgaactgcgcagcttctagtgattctcagcttctgataaacttgcttttgatga 25448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 172
Target Start/End: Complemental strand, 22464793 - 22464643
Alignment:
Q  24 catttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaac-ttttgaagctttaagttgcatctcc 121  Q
    ||||||||| ||| ||||||   |||||||||||||||||||||| |||| |||| || ||||| |  |||||| ||||||||||||| ||| |||||||    
T  22464793 catttcaaattagtcgttgcttcacttttccagtcttctgcaatgcttagatgagattaaatccgttgaacaaccttttgaagctttatgttacatctcc 22464694  T
Q  122 tgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctg 172  Q
    |||||||||| ||| ||||||||||  |||||||| |||||||||||||||    
T  22464693 tgatgaactgtagcatctggtgattttcagcttcttatgaacttgcttctg 22464643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 21544184 - 21544296
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac-ttgcttctgatgacgtcaccacttcaggagcac 196  Q
    |||||| ||||| ||||||||| ||||||||||| ||||||||||||| |||||||||| |||||| ||||||||||||| |||| ||||||||  ||||    
T  21544184 tttgaaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgatgtcatcacttcagaggcac 21544283  T
Q  197 tttgtctttagga 209  Q
    |||||||| ||||    
T  21544284 tttgtcttcagga 21544296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 236
Target Start/End: Complemental strand, 22427339 - 22427113
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||| ||||||   |||||||||||||||||||||| ||||  ||| || ||||  |  ||||   |||||||||||| ||||||||||||||    
T  22427339 tttcaaactagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatctattgaacagtctttgaagctttatgttgcatctcctga 22427240  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgct---------------tctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||| ||||||||||||||  |||||||| |||||||||||               ||||||||| |||||||||||||||||||| |||||  |||    
T  22427239 tgaactggagcttctggtgattttcagcttctgatgaacttgcttctggtagacttgcttctgatgacatcaccacttcaggagcacttggtcttcggga 22427140  T
Q  210 acaattttcttcagacgctttaagctt 236  Q
     || |||||||||||| ||||||||||    
T  22427139 gcagttttcttcagacactttaagctt 22427113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 29215895 - 29216031
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||| ||||||||||   ||||||| |||||| ||||||| ||||  ||| || ||||| | ||||||| |||||||||||||||||||||||||||    
T  29215895 tttcaaactagccgttgcttcacttttctagtcttttgcaatgcttagacgagattaaatccattaaacaacctttgaagctttaagttgcatctcctga 29215994  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatga 161  Q
    |||| |||| ||||||||||||  |||||||| ||||    
T  29215995 tgaattgcaacttctggtgattttcagcttctgatga 29216031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 23024854 - 23025042
Alignment:
Q  3 ttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttga 102  Q
    |||| ||||||||||||||||| ||||||||||| |||||| | ||||| | ||||||||||||| |  || ||| || ||||||||||||| |||||||    
T  23024854 ttgaggaataagcatccaatgcttttcaaaatagtcgttgcta-actttccaagtcttctgcaatttctggcgagattaaatccttgaaacagcttttga 23024952  T
Q  103 agctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtc 202  Q
    ||||||| ||||||| | | ||||| ||||||||| ||                 |||||||||||||||||||||||| |||||||| |||||||||||    
T  23024953 agctttaggttgcattttccgatgacctgcagcttttg-----------------atgaacttgcttctgatgacgtcatcacttcagaagcactttgtc 23025035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 198
Target Start/End: Complemental strand, 28492320 - 28492211
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    |||||| |||||||||||||||  |||||||||||||||||| || ||||||  |||   |||||||| |||||||||||||||||||||||| |||||     
T  28492320 aacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctgaagatcttcagcttctgatgaacttgcttctgatgacgtcatcacttg 28492221  T
Q  189 aggagcactt 198  Q
    ||||||||||    
T  28492220 aggagcactt 28492211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 237
Target Start/End: Original strand, 2267208 - 2267382
Alignment:
Q  47 acttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||| ||||||||||||||||||||| ||||||||         
T  2267208 acttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttatgttgcatctcctgatgaactgtagcttctg----- 2267302  T
Q  146 tcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
                |||||||||||||| |||||||||| |||||||||||||| |||||| || | || ||||||||| | ||||||||||||    
T  2267303 ------------atgaacttgcttctaatgacgtcactacttcaggagcactatgtcttcagaagcagttttcttcatatgctttaagcttc 2267382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 21029000 - 21029104
Alignment:
Q  132 cagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgcttta 231  Q
    ||||||||||||||   |||||||| |||||||||||| ||||||||||| |||||||||||||| ||| ||| |||| || ||||||||| | ||||||    
T  21029000 cagcttctggtgatcttcagcttctgatgaacttgcttttgatgacgtcatcacttcaggagcac-ttgacttgaggagcacttttcttcatatgcttta 21029098  T
Q  232 agcttc 237  Q
    ||||||    
T  21029099 agcttc 21029104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 7745028 - 7744952
Alignment:
Q  69 ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||| ||||||||||||| | |||||||||||||| || || ||||||||| |||||||||||||||||||||||||    
T  7745028 ttagatgagtttgaatccattaaacaacttttgaaactgtaggttgcatcttctgatgaactgcagcttctggtgat 7744952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 144
Target Start/End: Complemental strand, 34255521 - 34255389
Alignment:
Q  12 aagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta--ggtgagtttgaatccttgaaacaacttttgaagcttta 109  Q
    ||||||||||||| ||||||| ||| ||||| || ||||| | ||||||||||||| ||   |||||| |||||||||||||||| ||||||||||||||    
T  34255521 aagcatccaatgcttttcaaactagtcgttgtca-actttccaagtcttctgcaatctttctggtgagcttgaatccttgaaacagcttttgaagcttta 34255423  T
Q  110 agttgcatctcctgatgaactgcagcttctggtga 144  Q
     |||| ||||  |||| | ||||||||||||||||    
T  34255422 ggttg-atcttatgataatctgcagcttctggtga 34255389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 25448390 - 25448332
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||    
T  25448390 gcttctaatgaacttgcttctgatgacgtcatcacttcaggagtactttgtcttcagga 25448332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 26702019 - 26701898
Alignment:
Q  115 catctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaat 214  Q
    ||||| ||||||||||  |||||||||||||   ||| |||| ||||||||||||||||||| |||| ||||||| |||||| ||| ||| |||| || |    
T  26702019 catcttctgatgaactttagcttctggtgatcttcagtttctgatgaacttgcttctgatgatgtcatcacttcatgagcac-ttgacttcaggagcact 26701921  T
Q  215 tttcttcagacgctttaagcttc 237  Q
    |||||||| |||||| |||||||    
T  26701920 tttcttcatacgcttcaagcttc 26701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 12284651 - 12284765
Alignment:
Q  121 ctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttctt 220  Q
    |||||||||| ||||||||||||||     |||||| |||||||||||||||||||||||| |||||||| ||||||||| ||| |||| || || ||||    
T  12284651 ctgatgaacttcagcttctggtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcagaagcactttgacttcaggagcacttctctt 12284748  T
Q  221 cagacgctttaagcttc 237  Q
    |||| | || |||||||    
T  12284749 cagatgtttcaagcttc 12284765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 21204758 - 21204685
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||||| |||||||| ||||| ||||||| |||| || ||||||| ||||||||||||||||    
T  21204758 ttgcttctgatgacgtcatcacttcagaagcacgttgtcttcaggagcacttttctttagacgctttaagcttc 21204685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 16235168 - 16235065
Alignment:
Q  135 cttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt-tgtctttaggaacaattttcttcagacgctttaag 233  Q
    |||||||||||   |||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||| |||| || || | |||||| |||| |||    
T  16235168 cttctggtgatcttcagcttctgatgaacttacttctgatgacgtcatcacttcaggagcacttgtgtcttcaggagcacttcttttcagatgcttcaag 16235069  T
Q  234 cttc 237  Q
    ||||    
T  16235068 cttc 16235065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 237
Target Start/End: Original strand, 7309982 - 7310130
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    |||| |||||||||||||||||  ||||||||||||||| ||  ||||| |||||||   |||||||| ||||  | | |||||||||||||| ||||||    
T  7309982 aacagcttttgaagctttaagtcttgcatctcctgatgagctttagcttatggtgatcttcagcttctgatgagat-gtttctgatgacgtcatcacttc 7310080  T
Q  189 aggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    || ||||| |||||||| |||| || || |||||||| ||| ||||||||    
T  7310081 agaagcacttttgtcttcaggagcacttctcttcagatgctataagcttc 7310130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 197
Target Start/End: Original strand, 10757591 - 10757692
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggag 193  Q
    |||||||||||||||||  |||||||||||||||||| |||||| || ||||     |||||| ||||||||||| |||||||||||| ||||| |||||    
T  10757591 cttttgaagctttaagtcttgcatctcctgatgaacttcagcttttgatgatctt--gcttctgatgaacttgctcctgatgacgtcatcactttaggag 10757688  T
Q  194 cact 197  Q
    ||||    
T  10757689 cact 10757692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 12613633 - 12613588
Alignment:
Q  153 ttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  12613633 ttctaatgaacttgcttctgatgacgtcatcacttcaggagcactt 12613588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 2268767 - 2268815
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||    
T  2268767 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttt 2268815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 19170245 - 19170181
Alignment:
Q  112 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||| ||||||||||| |||||||||||||  | ||||||| |||||||||||||||||||    
T  19170245 ttgcatcttctgatgaactgtagcttctggtgatataaagcttctgatgaacttgcttctgatga 19170181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 237
Target Start/End: Original strand, 46089226 - 46089306
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactt-tgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||| | || || |||||||||||| |||||||||||    
T  46089226 atgaacttgcttctgatgacgtcatcacttcaggagcacttcagacttcatgagcagttttcttcagacactttaagcttc 46089306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 2327258 - 2327207
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  2327258 atgaacttgcttctgatgacgtcatcacttcagaagcactttgtcttcagga 2327207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 21191712 - 21191634
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||||||||||| ||||||||||| || ||| ||| |||| || ||||||||||| |||| |||||||    
T  21191712 atgaacttgcttctgatgacgtcatcacttcaggaggac-ttgacttcaggagcacttttcttcagatgcttcaagcttc 21191634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 38282806 - 38282867
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaaca 212  Q
    |||||| || |||||||||||||||| ||||  ||||||||||||||||||||| |||||||    
T  38282806 gcttctgataaacttgcttctgatgaggtcattacttcaggagcactttgtcttcaggaaca 38282867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 29216057 - 29216109
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||| ||| |||||||| ||||||| ||||||||||||||||||||||||    
T  29216057 cttcaggggcattttgtcttcaggaacagttttcttcagacgctttaagcttc 29216109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 19717762 - 19717809
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||||||    
T  19717762 gcttctgatgaacttgcttatgatgacgtcatcacttcaggagcactt 19717809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 20954455 - 20954333
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||| ||| ||||   ||| |||| ||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  20954455 tttcaaaatggccattgcttcactcttcctgtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 20954356  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  |||||||||||||    
T  20954355 gatgaactagagcttctggtgat 20954333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 22600022 - 22599935
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| || |||||||||||||||| |||| |||||||||||||| |||||||| |||| |  || |||||||| |||| |||||||    
T  22600022 gcttctgataaacttgcttctgatgatgtcatcacttcaggagcacttttgtcttcaggagcgcttctcttcagatgcttcaagcttc 22599935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 22600164 - 22600042
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| |||||   |||| |||||||||||||||||| ||||   || || ||||| |  |||| | |||||||||||||||  ||||||||||    
T  22600164 tttcaaaatagtcgttgttttactcttccagtcttctgcaatgcttagacaagattaaatccattgaacagcctttgaagctttaagtcttgcatctcct 22600065  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  |||||||||||||    
T  22600064 gatgaactagagcttctggtgat 22600042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 30572421 - 30572492
Alignment:
Q  167 cttctgatgacgtcaccacttcaggagcacttt-gtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||| |||||||||||||||||   ||| |||| || ||||||||||||||||||| ||||    
T  30572421 cttctgatgacgtcatcacttcaggagcactttaaacttcaggagcagttttcttcagacgctttaaacttc 30572492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 33256193 - 33256106
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||||||||| | |||| |||||||||||||| |||||||| | || || || |||||| |||| |||||||||    
T  33256193 gcttctgatgaacttgcttctgataatgtcatcacttcaggagcacttttgtcttcaagagcacttctcttcaaacgccttaagcttc 33256106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 33256329 - 33256211
Alignment:
Q  30 aaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctgatg 126  Q
    ||||||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||| ||    
T  33256329 aaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgttg 33256230  T
Q  127 aactgcagcttctggtgat 145  Q
    ||||  |||||||||||||    
T  33256229 aactttagcttctggtgat 33256211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 33276365 - 33276278
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||||||||| | |||| |||||||||||||| |||||||| | || || || |||||| |||| |||||||||    
T  33276365 gcttctgatgaacttgcttctgataatgtcatcacttcaggagcacttttgtcttcaagagcacttctcttcaaacgccttaagcttc 33276278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 33276501 - 33276383
Alignment:
Q  30 aaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcctgatg 126  Q
    ||||||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||| ||    
T  33276501 aaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctggtg 33276402  T
Q  127 aactgcagcttctggtgat 145  Q
    ||||  |||||||||||||    
T  33276401 aactttagcttctggtgat 33276383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 35402047 - 35402094
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  35402047 gcttctgatgaacttgcttctgatgaggtcatcacttcaggagcactt 35402094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 38282664 - 38282786
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    |||||||||| |||||||   ||| |||||||||||||| ||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  38282664 tttcaaaatacccgttgcttcactcttccagtcttctgcgatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 38282763  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||||||  ||||| |||||||    
T  38282764 gatgaactagagcttttggtgat 38282786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 48570066 - 48570015
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||| |||||||||||||| || ||||||||||||||||||| ||||    
T  48570066 atgaacttgtttctgatgacgtcatcatttcaggagcactttgtcttcagga 48570015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 22154028 - 22154077
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  22154028 tttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 22154077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 29216021 - 29216059
Alignment:
Q  166 gcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  29216021 gcttctgatgacgtcaccacttcaggagcactttttctt 29216059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 30893314 - 30893380
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||||| ||||||||||| |||||| ||| |||| || || |||||||| ||||    
T  30893314 cttgcttctgatgacgtcatcacttcaggagtactttgacttcaggagcacttctcttcagatgctt 30893380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 34255369 - 34255311
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| ||||||||||||||||||||||||  |||||||  |||||||||||| ||||    
T  34255369 gcttctgatgaacttgcttctgatgacgtcattacttcagaggcactttgtcttcagga 34255311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 1900443 - 1900550
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  || ||| ||||||||||||||  |||||||||||    
T  1900443 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaataacctttgaagctttaagtcttgcatctcct 1900542  T
Q  123 gatgaact 130  Q
    ||||||||    
T  1900543 gatgaact 1900550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 1900607 - 1900659
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||||||| |||| || || |||||||||| ||||||||||    
T  1900607 cttcaggagcactttgtcttcaggagcagttctcttcagacgttttaagcttc 1900659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 20954313 - 20954265
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||||||||  ||||||||||||| |||||||||||||||||    
T  20954313 gcttctgatgaacttgaatctgatgacgtcatcacttcaggagcacttt 20954265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 25448339 - 25448287
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  25448339 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 25448287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 48704456 - 48704504
Alignment:
Q  150 agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    ||||||| |||| |||| |||||||||||||| ||||||||||||||||    
T  48704456 agcttctgatgaccttgtttctgatgacgtcatcacttcaggagcactt 48704504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 17024821 - 17024774
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||| | |||||||| |||||||    
T  17024821 gcttctgatgaacttgcttctgatgacgttatcacttcagaagcactt 17024774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 17371188 - 17371275
Alignment:
Q  90 aaacaact-tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||||| |||||| ||| | |||||||||  |||||||||| |||||||||||||   |||||||| ||  |||||||||||||||    
T  17371188 aaacaactatttgaaacttcaggttgcatcttttgatgaactgtagcttctggtgatatgcagcttctgatagacttgcttctgatga 17371275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 23036369 - 23036322
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| ||||| ||||||||||||| |||| ||||||||||||||||    
T  23036369 gcttctgatgaaattgcttctgatgatgtcatcacttcaggagcactt 23036322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 12284587 - 12284643
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| ||||||||| |||||  ||||||| |||||||||| ||||||||||||||    
T  12284587 aacaacctttgaagctctaagtcttgcatcttctgatgaacttcagcttctggtgat 12284643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 19170176 - 19170131
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||    
T  19170176 ttgcttctgatgacgtcatcacttcagaggcactttgtcttcagga 19170131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 48704368 - 48704424
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| |||||||||||||||  ||||||| ||||||||||  |||||||||||||    
T  48704368 aacaacctttgaagctttaagtcttgcatcttctgatgaactttagcttctggtgat 48704424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 2327214 - 2327162
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| | || |||| |||| || ||||||||||||||||||||||||    
T  2327214 cttcaggagcgccttatcttcaggagcagttttcttcagacgctttaagcttc 2327162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 4178266 - 4178326
Alignment:
Q  164 ttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    |||||||||||||||||| |||||||| |||||||   ||| |||| || |||||||||||    
T  4178266 ttgcttctgatgacgtcatcacttcagaagcacttccgcttcaggagcagttttcttcaga 4178326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 10251266 - 10251318
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||   ||| |||| || ||||||||||||||||||||||||    
T  10251266 cttcaggagcacttcaacttcaggagcagttttcttcagacgctttaagcttc 10251318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 22154097 - 22154145
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||||| |||||||||||| ||||||||| ||||| |||| ||||||    
T  22154097 gcttctaaggaacttgcttctaatgacgtcatcactttaggaacacttt 22154145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 35013291 - 35013355
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  35013291 tgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcagatgctt 35013355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 38282857 - 38282909
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||| || |||||||| |||| || || |||||||||||||||||||||    
T  38282857 cttcaggaacattttgtcttcaggagcagttctcttcagacgctttaagcttc 38282909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 48570022 - 48569970
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||| ||||||||||    
T  48570022 cttcaggagcgctttatcttcaggagcagttttcttcagacgatttaagcttc 48569970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 65440 - 65257
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  65440 tttcaaaatagtcgtttctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaatagcttttgaagctttaagttgcatctcctgat 65341  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| |||||| ||||||| ||||    
T  65340 gaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgacatcatcacttcaagagcacgttgtcttcagga 65257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 144485 - 144334
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    |||||||| || |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  144485 tttcaaaacagtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaatagcttttgaagctttaagttgcatctcctgat 144386  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  144385 gaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatgac 144334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 93 - 237
Target Start/End: Complemental strand, 89999 - 89855
Alignment:
Q  93 caacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcagga 192  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  89999 caacctttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcaccacttcagga 89900  T
Q  193 gcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  89899 gcactttgtcttcaggaacaattttcttcagacgctttaagcttc 89855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 8031 - 8214
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgat 125  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||||  |||||||||||||||||||| |||||||||||||||||| ||||| |||||    
T  8031 tttcaaaatagtcgttgctatacttttccagtcttctgcaatcttagacgagtttgaatccttgaaacagcttttgaagctttaagttacatcttctgat 8130  T
Q  126 gaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||||||  || ||| || ||||||||||||||||| |||||||||||||||||||||| ||||    
T  8131 gaactgcagcttctggtgattcacagccactgatgtacgtgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 8214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 59 - 209
Target Start/End: Original strand, 1 - 151
Alignment:
Q  59 ttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaa 158  Q
    ||||||||| ||||  |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  || |    
T  1 ttctgcaatcttagacgagtttgaatccttgaaacagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgattcacagccactga 100  T
Q  159 tgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    || || ||||||||||||||||| |||||||||||||||||||||| ||||    
T  101 tgtacgtgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 121; Significance: 4e-62; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 246215 - 246075
Alignment:
Q  69 ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgct 168  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  246215 ttaggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgct 246116  T
Q  169 tctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  246115 tctgatgacgtcatcacttcaggagcactttgtcttcagga 246075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 212594 - 212680
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||||| ||| |||| || || |||||||||| || |||||||    
T  212594 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcactttgacttcaggagcacttctcttcagacgtttcaagcttc 212680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 6210 - 6092
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| |||||||  |  |||| | ||||||||||||||  |||||||||||    
T  6210 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatcctttgaagctttaagtcttgcatctcct 6111  T
Q  123 gatgaactgcagcttctgg 141  Q
    |||||| | || |||||||    
T  6110 gatgaattacaacttctgg 6092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 60905 - 61086
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    ||||||||||||||| ||||||||||||||||||||||| || ||  |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  60905 caaaatagccgttgctatacttttccagtcttctgcaatttttagacgagtttaaatcctttaaacaacttttgaagttttaagttgcatctcctgatga 61004  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||| || ||||||||||||| || ||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  61005 actacaacttctggtgattctcaacttctgataaacttgcttctgatgacgtcatcacttcaggagcactttgtctttagga 61086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 867 - 663
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| | |||  ||||| || ||||||||||| ||||    
T  867 ctttgaagaataagcatccaatacatttcaaaatagctgttgccatacttttctagtcttctgcaatttatagacgagttagagtccttgaaacagcttt 768  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||  |||||||||| |||||||||||||| ||||||||| |||| ||| |||  |||    
T  767 tgaaactttaagtttcatctcctgatgaactgcagtttctggtgaaacacagcttctgatgaacttgcttctaatgacgtcatcactacagaagccattt 668  T
Q  200 gtctt 204  Q
    |||||    
T  667 gtctt 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 29 - 204
Target Start/End: Original strand, 9257 - 9432
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 128  Q
    |||||||| |||||| ||||||||||| ||||||||||| || | ||||||||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  9257 caaaatagtcgttgctatacttttccaatcttctgcaatctttgatgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatgaa 9356  T
Q  129 ctgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    || || ||||||||||||| |||||||| || ||||||||||||||| |||||  |||||||||||||||||||||    
T  9357 ctacaacttctggtgattctcagcttctgataaacttgcttctgatggcgtcattacttcaggagcactttgtctt 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 174
Target Start/End: Complemental strand, 7165 - 7019
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||  | |||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  7165 caaaatagtcgttgctatacttttccagtcttctgcaatcttcagacgggtttgaatccttcaaacagcttttgaagctttaagttgcatctcctgatga 7066  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||    
T  7065 actacagcttctggtgattcacagcttctgatgaacttgcttctgat 7019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 78378 - 78194
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   ||||||||||||||||||||| || ||  ||||||||||||   ||| | |||||||||||||||| |||||||| |||    
T  78378 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatctttagacgagtttgaatccgataaatagcttttgaagctttaagctgcatctcatga 78279  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| |||||||||||||||| ||| |||| |||||||||||||||||||| ||| |||||||||||||||||||||| ||||    
T  78278 tgaactacagcttctggtgattctcagattctgatgaacttgcttctgatgacatcatcacttcaggagcactttgtcttcagga 78194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 5370 - 5209
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaat-gttaggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||||||  ||||| ||||| || ||||| ||||| ||||    
T  5370 ctttgaagaataggcatccaatgcatttcaaaatagctgttgccacacatttccagtcttctgcaatctttaggcgagttagagtccttaaaacagcttt 5271  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatga 161  Q
    |||| || ||||||  |||||||||||||||||||||||||||||| |||||||||| ||||    
T  5270 tgaaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatga 5209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 176
Target Start/End: Original strand, 3406 - 3554
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    ||||||||||||||  ||||||||||| ||||||||||| || ||  |||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  3406 caaaatagccgttgttatacttttccaatcttctgcaatctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatga 3505  T
Q  128 actgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||  ||||||||||||||  |||||||| || ||||||||||||||||    
T  3506 actatagcttctggtgattttcagcttctgataaacttgcttctgatga 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 3559 - 3617
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  3559 gcttctgatgaccttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 3617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 3610 - 3662
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || |||||||||||| |||||||||||    
T  3610 cttcaggagcgctttatcttcaggagcagttttcttcagacactttaagcttc 3662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7446 - 7622
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||| |||| |||||||||||||||||||| |||||||||||| ||| || |||||||||| ||| | |||| ||||| || ||||||||||||||||    
T  7446 ctttgatgaattagcatccaatgcatttcaaactagccgttgccacactctttcagtcttctgtaatttctaggcgagttagagtccttgaaacaacttt 7545  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    ||||   || |||| |||||| |||||||||  ||||||||||||| || ||||||| |||||||||||||||||||    
T  7546 tgaaaacttgagttccatctcttgatgaactaaagcttctggtgatacatagcttctgatgaacttgcttctgatga 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 6752 - 6601
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| || |||   |||||||||||||||||||||  ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||    
T  6752 tttcaaaatagtcggtgcttcacttttccagtcttctgcaatccttagacaagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctga 6653  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    |||||| |||||||||||||||| |||||||| || ||||||||||||||||    
T  6652 tgaactacagcttctggtgattctcagcttctgataaacttgcttctgatga 6601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 6589 - 6538
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||||| ||||    
T  6589 atgaacttgctcctgatgacgtcatcacttcaggagcattttgtcttcagga 6538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 98 - 236
Target Start/End: Original strand, 7875 - 8015
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    |||||||||||||||  |||||||||||||||| |  |||||||||||||   |||||||| |||||||||||| | ||||||||||||| || ||||||    
T  7875 tttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgatcttcagcttctgatgaacttgcttttaatgacgtcaccacctcgggagca 7974  T
Q  196 ctttgtctttaggaacaattttcttcagacgctttaagctt 236  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  7975 ctttgtcttcaggagcaattttcttcagacgctttaagctt 8015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 176
Target Start/End: Original strand, 11447 - 11611
Alignment:
Q  13 agcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttttgaagctttaag 111  Q
    |||||||||||||||||||| |||||||||||| ||| ||||||||||||| ||| | |||| ||||| || |||||||||||| |||||||   || ||    
T  11447 agcatccaatgcatttcaaactagccgttgccacactcttccagtcttctgtaatttctaggcgagttagagtccttgaaacaaattttgaaaacttgag 11546  T
Q  112 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    || |||||| |||||||||||||||||||||||| || ||||| | |||||||||||| ||||||    
T  11547 ttccatctcttgatgaactgcagcttctggtgatacatagcttatgatgaacttgcttttgatga 11611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 11616 - 11674
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| ||||||| ||||||||||||||||  ||||||| ||||||||||||| ||||    
T  11616 gcttctgatgaactagcttctgatgacgtcattacttcagaagcactttgtcttcagga 11674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 215509 - 215358
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||||||||||   ||||||| ||||||||||||| || ||  |||||||||||| | ||||| ||||||||| |||||||||||||||||||    
T  215509 tttcaaaatagccgttgcttcacttttctagtcttctgcaatctttagacgagtttgaatccattaaacagcttttgaagttttaagttgcatctcctga 215410  T
Q  125 tgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    | ||||||||||||||||||||  | |||||| || ||||||||||||||||    
T  215409 taaactgcagcttctggtgattttcggcttctgataaacttgcttctgatga 215358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 215361 - 215310
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||| ||||    
T  215361 atgaacttgcttctgatgacgtctccacttcatgagcactttggcttcagga 215310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 174
Target Start/End: Original strand, 20697 - 20859
Alignment:
Q  12 aagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta--ggtgagtttgaatccttgaaacaacttttgaagcttta 109  Q
    ||||||||||||| ||||||| ||||||||| || ||||| | ||||||||||||| ||   |||||| |||||||||||||||||||||||||||||||    
T  20697 aagcatccaatgcttttcaaactagccgttgtca-actttcctagtcttctgcaatctttctggtgagcttgaatccttgaaacaacttttgaagcttta 20795  T
Q  110 agttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
      ||| ||||  |||| | ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  20796 gattg-atcttatgataatctgcagcttctggtgatacacaacttctgatgaacttgcttctgat 20859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 174
Target Start/End: Original strand, 10796 - 10958
Alignment:
Q  12 aagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgtta--ggtgagtttgaatccttgaaacaacttttgaagcttta 109  Q
    |||||||| |||| ||||||| || |||||| || ||||| | ||||||||||||| ||   |||||| |||||||||||||||||||||||||||||||    
T  10796 aagcatcctatgcttttcaaactatccgttgtca-actttccaagtcttctgcaatctttctggtgagcttgaatccttgaaacaacttttgaagcttta 10894  T
Q  110 agttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
     |||| ||||  |||| | ||||||||||||||||| |||| ||||| |||||||||||||||||    
T  10895 ggttg-atcttatgataatctgcagcttctggtgatacacaacttctgatgaacttgcttctgat 10958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 5614 - 5459
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    |||||||||||  |||||  |||||||||||||||||||||| || ||  |||||||||||| | |||||||||||||| |||||| |||||||| ||||    
T  5614 tttcaaaatagttgttgctttacttttccagtcttctgcaatctttagacgagtttgaatccattaaacaacttttgaatctttaaattgcatcttctga 5515  T
Q  125 tgaa---ctgcagcttctggtgattcacagcttctaatgaacttgcttctgatgac 177  Q
    ||||   | ||||||||||||||||| |||||||| || |||||||||||||||||    
T  5514 tgaacagcagcagcttctggtgattctcagcttctgataaacttgcttctgatgac 5459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 15006 - 15070
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  15006 tgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcagatgctt 15070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 87646 - 87506
Alignment:
Q  1 ctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgt-taggtgagtttgaatccttgaaacaacttt 99  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| | ||||  |||| || ||||||||||| ||||    
T  87646 ctttgaagaatttgcatccaatgcatttcaaaatagtcgttgccatactttttcagtcttctgcaatttctaggcaagttagagtccttgaaacagcttt 87547  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctg 140  Q
    |||| |||||||||  |||||||||| |||| ||| |||||    
T  87546 tgaaactttaagttcaatctcctgataaactacagtttctg 87506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 87475 - 87424
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||| |||||||||||||||| |||||||| ||||||||||||| ||||    
T  87475 atgaactagcttctgatgacgtcatcacttcagaagcactttgtcttcagga 87424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 68; Significance: 2e-30; HSPs: 5)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 99216 - 99069
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 128  Q
    |||||||| |||||| |||||||||| ||| |||||||  ||||  |||||||||||| | ||||| |||||||||||||||||||||  ||||||||||    
T  99216 caaaatagtcgttgctatacttttccggtcatctgcaactttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaa 99117  T
Q  129 ctgcagcttctggtgattcacagcttctaatgaacttgcttctgatga 176  Q
    || || |||||||||||   |||||||| || ||||||||||||||||    
T  99116 ctacaacttctggtgatcttcagcttctgataaacttgcttctgatga 99069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 19344 - 19259
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||||| | |||||||||||||| ||| ||| |||| || || ||||||||||||| |||||||    
T  19344 gcttctgatgaacttgcttctgatgacgttatcacttcaggagcac-ttgacttcaggagcacttctcttcagacgcttcaagcttc 19259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 209
Target Start/End: Complemental strand, 99057 - 99006
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||| |||||||||||||||||||  ||||||||||||||||||||| ||||    
T  99057 atgaccttgcttctgatgacgtcattacttcaggagcactttgtcttcagga 99006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 19418 - 19362
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    ||||||||||||||||||||||  |||||||||| ||||||| || |||||||||||    
T  19418 aacaacttttgaagctttaagtcttgcatctcctcatgaactacaacttctggtgat 19362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 99013 - 98961
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| ||||  |||||||| || ||||||||||| ||||||||||||    
T  99013 cttcaggagcgctttaactttaggagcagttttcttcagaagctttaagcttc 98961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 209
Target Start/End: Original strand, 791 - 996
Alignment:
Q  3 ttgaagaataagcatccaatgcattt-caaaatagccgttgccatacttttccagtcttctgcaatgtta--ggtgagtttgaatccttgaaacaacttt 99  Q
    |||| ||||||||||||||||| ||| ||||||||||||||  | |||||   ||||||||||||| ||   || ||| |||||||||||||||| ||||    
T  791 ttgaggaataagcatccaatgctttttcaaaatagccgttgtta-actttcaaagtcttctgcaatttttctggcgagcttgaatccttgaaacagcttt 889  T
Q  100 tgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcaca-gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||| |||| ||||  |||||| ||||||||||||||||   ||  |||| | |||||||||||||||||||||||| |||||||| |||||||    
T  890 tgaagctttaggttg-atcttttgatgatctgcagcttctggtga---acttgcttatgatgaacttgcttctgatgacgtcatcacttcagaagcactt 985  T
Q  199 tgtctttagga 209  Q
    |||||| ||||    
T  986 tgtcttcagga 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 211500 - 211612
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatga 127  Q
    |||||||| |||||| ||||||||||||||||||||||| || ||  |||||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  211500 caaaatagtcgttgctatacttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagctgcatctcctgatga 211599  T
Q  128 actgcagcttctg 140  Q
     || |||||||||    
T  211600 gctacagcttctg 211612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 220478 - 220555
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||| ||| ||| |||| || ||||||||||||||||    
T  220478 gcttctgatgaacttgcttctgatgacgtcattacttcaggagcac-ttgacttcaggagcacttttcttcagacgctt 220555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 377429 - 377383
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  377429 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcact 377383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 211648 - 211694
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||| ||||||||| |||||||||||||||||||||| ||||    
T  211648 cttgcttctaatgacgtcatcacttcaggagcactttgtcttcagga 211694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 244116 - 244076
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||||| ||||||||||| ||||||| ||||||||    
T  244116 atgaacttgcttttgatgacgtcatcacttcatgagcactt 244076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 237
Target Start/End: Original strand, 32584 - 32799
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| |||| |   ||| |||||||||||||||||| ||||  ||| || ||||| |  ||||   |||||||||||||||  ||||||||||    
T  32584 tttcaaaatagtcgttacttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagtctttgaagctttaagtcttgcatctcct 32683  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttc 221  Q
    |||||||| ||  || |||||||    ||||||| |||||||| ||||||||||||||| |||||||||||||| |||||||| || | || ||||||||    
T  32684 gatgaactacaagttgtggtgatctttagcttctgatgaacttacttctgatgacgtcatcacttcaggagcacttttgtcttcagaagcacttttcttc 32783  T
Q  222 agacgctttaagcttc 237  Q
    |||||| |||||||||    
T  32784 agacgccttaagcttc 32799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 199
Target Start/End: Original strand, 49504 - 49606
Alignment:
Q  98 tttgaagctttaag--ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    ||||||||||||||  ||||||||||||||||||| || |||||||||||   |||||||| ||||  | ||||||||||| |||| |||||||||||||    
T  49504 tttgaagctttaagacttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatgagat-gcttctgatgaagtcatcacttcaggagca 49602  T
Q  196 cttt 199  Q
    ||||    
T  49603 cttt 49606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 307 - 207
Alignment:
Q  75 gagtttgaatccttgaaacaact-tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctga 173  Q
    |||||||||||| | ||||| || |||||| ||||| ||||||||| |||||||| | ||| ||||||||||  ||||||||| ||  ||||||||||||    
T  307 gagtttgaatccattaaacagctatttgaaactttaggttgcatcttctgatgaagtacagtttctggtgatatacagcttctgatagacttgcttctga 208  T
Q  174 t 174  Q
    |    
T  207 t 207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 172
Target Start/End: Original strand, 22775 - 22924
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   |||||||||||||||||||||| ||||  ||| || ||||| |  |||||| |||||||||||||||  ||||||||||    
T  22775 tttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcct 22874  T
Q  123 gatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctg 172  Q
    |||||||| |||| |||||||||   |||||||| |||||||||||||||    
T  22875 gatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctg 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 91 - 237
Target Start/End: Complemental strand, 27375 - 27229
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttc 188  Q
    |||||| |||||||||||||||  |||||||||||||||||| |||| |||||||||     |||||| ||||||||||||||||||| |||| ||||||    
T  27375 aacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcatctggtgatctt--gcttctgatgaacttgcttctgatgatgtcatcacttc 27278  T
Q  189 aggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||| ||| || | || || |||||||| |||| |||||||    
T  27277 aggagcactttgccttcagaagcacttctcttcagatgcttcaagcttc 27229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 98 - 209
Target Start/End: Complemental strand, 20332 - 20220
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac-ttgcttctgatgacgtcaccacttcaggagcac 196  Q
    |||||| ||||| |||| |||| ||||||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||||  |||||||  ||||    
T  20332 tttgaaactttaggttgtatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatgacgtcattacttcagaggcac 20233  T
Q  197 tttgtctttagga 209  Q
    |||||||| ||||    
T  20232 tttgtcttcagga 20220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 515 - 444
Alignment:
Q  133 agcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctt 204  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  515 agcttctggtgattttcagcttctgatgaacttgcttctgatgacgtcaccacttaaggagcactttgtctt 444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 1711 - 1598
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctga 124  Q
    ||||||||||| ||||||   ||||||| ||||||||||||| || |   |||||||||||| | ||||| ||||||||||||| |||||||||||||||    
T  1711 tttcaaaatagtcgttgcttcacttttcaagtcttctgcaatatttaaacgagtttgaatccattaaacagcttttgaagctttgagttgcatctcctga 1612  T
Q  125 tgaactgcagcttc 138  Q
    ||||||||||||||    
T  1611 tgaactgcagcttc 1598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 11917 - 12028
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||| ||| | ||||||||| ||||||||||| |||||||||||||  ||| ||| | |||||||||||||||||||||||| ||||||||  |||||    
T  11917 tttgaaacttcaggttgcatcttctgatgaactgtagcttctggtgatatacaacttttgatgaacttgcttctgatgacgtcatcacttcagaggcact 12016  T
Q  198 ttgtctttagga 209  Q
    ||||||| ||||    
T  12017 ttgtcttcagga 12028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 209
Target Start/End: Original strand, 35402 - 35500
Alignment:
Q  111 gttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    ||||||||| |||||||| || ||||||| |||||  ||||||||| |||||||||||||||||||||||| ||||||||  |||||||||||| ||||    
T  35402 gttgcatcttctgatgaattgtagcttctagtgatatacagcttctgatgaacttgcttctgatgacgtcatcacttcagaggcactttgtcttcagga 35500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 237
Target Start/End: Original strand, 39597 - 39738
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    ||||||||||||| |  ||||||||||||||||||  |||||||||||||   |||||||| |||||||||||||||||| ||| |  |||||| |||||    
T  39597 tttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgtcgttatgacttcaagagca 39696  T
Q  196 ctttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| ||| |||| || || |||||||| |||| |||||||    
T  39697 ctttgacttcaggagcacttctcttcagatgcttcaagcttc 39738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 237
Target Start/End: Original strand, 137657 - 137798
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    ||||||||||||| |  ||||||||||||||||||  |||||||||||||   |||||||| |||||||||||||||||| ||| |  |||||| |||||    
T  137657 tttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgtcgttatgacttcaagagca 137756  T
Q  196 ctttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||| ||| |||| || || |||||||| |||| |||||||    
T  137757 ctttgacttcaggagcacttctcttcagatgcttcaagcttc 137798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 159310 - 159356
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  159310 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcact 159356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 198
Target Start/End: Original strand, 10141 - 10241
Alignment:
Q  98 tttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagca 195  Q
    |||||||||||||||  |||||||||||||||||| || ||||| |||||     |||||| |||||||||||||||||||||||| |||||||||||||    
T  10141 tttgaagctttaagtcttgcatctcctgatgaacttcaacttcttgtgatctt--gcttctgatgaacttgcttctgatgacgtcatcacttcaggagca 10238  T
Q  196 ctt 198  Q
    |||    
T  10239 ctt 10241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 658 - 571
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||| ||||||||| |||||||||||||| |||||||| |||| || || ||||||||| |||||||||||    
T  658 gcttctgatgaacttgcttctaatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacactttaagcttc 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 1943 - 2030
Alignment:
Q  150 agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||| |||| ||||||||||||||||||| ||||||| |||||||||| ||| |||| || || ||||||||| |||||||||||    
T  1943 agcttctgatgaccttgcttctgatgacgtcatcacttcatgagcactttgacttcaggagcacttctcttcagacactttaagcttc 2030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 5562 - 5484
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||  ||| |||| || || |||||||||||||    
T  5562 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcacttttacttcaggagcacttctcttcagacgctt 5484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 5636 - 5580
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgat 145  Q
    |||||| ||||||||| |||||  |||||||||||||||||| ||||||| ||||||    
T  5636 aacaacctttgaagctctaagtcttgcatctcctgatgaacttcagcttcaggtgat 5580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 18491 - 18405
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||| ||| |||| || || |||||||| |||| |||||||    
T  18491 gcttctgatgaacttgcttctgatgacgtcatcacttcatgagcactttgacttcaggagcacttctcttcagatgcttcaagcttc 18405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 18633 - 18511
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| || ||||| |  |||| | ||||||||||||| |  ||  ||||||    
T  18633 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaaatcttgtgtctcct 18534  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    |||||||||||||||||||||||    
T  18533 gatgaactgcagcttctggtgat 18511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 36645 - 36560
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |  |||||||| || || |||||||| |||| |||||||    
T  36645 gcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactat-actttaggatcacttctcttcagatgcttcaagcttc 36560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 42360 - 42445
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |  |||||||| || || |||||||| |||| |||||||    
T  42360 gcttctaatgaacttgcttctgatgacgtcatcacttcaggagcactat-actttaggatcacttctcttcagatgcttcaagcttc 42445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 143276 - 143364
Alignment:
Q  112 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttg 200  Q
    ||||||||| ||||||| |  ||||||| |||||   |||||||| ||||||||||||||||||| |||| ||||||||||||||||||    
T  143276 ttgcatctcgtgatgaaatagagcttctagtgatcttcagcttctgatgaacttgcttctgatgatgtcagcacttcaggagcactttg 143364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 143365 - 143417
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||||||| | || || ||||||||||||||||||||||||    
T  143365 cttcaggagcactttgtcttcaagagcagttttcttcagacgctttaagcttc 143417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 1617 - 1538
Alignment:
Q  98 tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaac-ttgcttctgatga 176  Q
    |||||| ||||| ||||||||| ||||||||||  ||||||||||||| |||||||||| |||||| |||||||||||||    
T  1617 tttgaaactttaggttgcatcttctgatgaactatagcttctggtgatacacagcttctgatgaactttgcttctgatga 1538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 6197 - 6316
Alignment:
Q  115 catctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaat 214  Q
    ||||| |||||||||| || ||||| |||||  |  |||||| |||||||||||||||||||||||| |||||||||| ||| ||| ||| |||| || |    
T  6197 catcttctgatgaacttcaacttctagtgat--attgcttctgatgaacttgcttctgatgacgtcatcacttcaggaacac-ttgacttcaggagcact 6293  T
Q  215 tttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||||||    
T  6294 tttcttcagatgcttcaagcttc 6316  T

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Target: scaffold0337 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 14901 - 14988
Alignment:
Q  150 agcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||| |||| ||||||||||||||||||  ||||||| |||||||||| ||| |||| || || ||||||||| |||||||||||    
T  14901 agcttctgatgaccttgcttctgatgacgtcgtcacttcatgagcactttgacttaaggagcacttctcttcagacactttaagcttc 14988  T

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Target: scaffold0275 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 8515 - 8566
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  8515 atgaacttgcttctgatgacgtcatcacttcaggagcactttgtcttcagga 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 8559 - 8611
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||||||||  ||| |||| || |||||||||||| |||||||||||    
T  8559 cttcaggagcactttaacttcaggagcagttttcttcagacactttaagcttc 8611  T

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Target: scaffold0026 (Bit Score: 44; Significance: 4e-16; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 60255 - 60342
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||||| |||||||| | || || || ||||||||||| |||||||||    
T  60255 gcttctaatgaacttgcatctgatgacgtcatcacatcaggagcacttttgtcttcaagagcatttctcttcagacgccttaagcttc 60342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 8148 - 8222
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagctt 236  Q
    ||||||||||||||||||| |||||||||||||| |||||||| |||| || || ||||||||||| ||||||||    
T  8148 cttgcttctgatgacgtcatcacttcaggagcacttttgtcttcaggagcacttctcttcagacgccttaagctt 8222  T

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Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 151760 - 151714
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  151760 gcttctgatgaacttgcttctgatgacgtcatcacttcaggagcact 151714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 115760 - 115818
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttagga 209  Q
    |||||| || ||||||||| ||||||||||| |||||||||||||||||| ||| ||||    
T  115760 gcttctgataaacttgcttttgatgacgtcatcacttcaggagcactttgacttcagga 115818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 8025 - 8144
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatgttaggt-gagtttgaatccttgaaacaacttttgaagctttaagtt--gcatctcct 122  Q
    ||||||||||| ||||||   |||||| ||||||||| ||||| | ||  ||| || ||||| |  |||||| ||||||||||||||||  |||||||||    
T  8025 tttcaaaatagtcgttgcttcacttttacagtcttctacaatgcttggacgagattaaatccattgaacaacctttgaagctttaagttttgcatctcct 8124  T
Q  123 gatgaactgcagcttctggt 142  Q
    ||||||||  ||||||||||    
T  8125 gatgaactttagcttctggt 8144  T

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Target: scaffold0861 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 4817 - 4739
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    |||||| |||||||||||||||||||| ||| |||||||||||||||||| ||| |||| || || |||||||| ||||    
T  4817 gcttctgatgaacttgcttctgatgacatcatcacttcaggagcactttgacttcaggagcacttctcttcagatgctt 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 10034 - 10120
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| || ||||||||||||||||||||| |||||||||||||||||| ||| || | || || |||||||| |||| |||||||    
T  10034 gcttctgattaacttgcttctgatgacgtcatcacttcaggagcactttgacttcagaagcatttctcttcagatgcttcaagcttc 10120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 5880 - 5776
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggag 193  Q
    |||||||||||||||||  |||||||||| ||||||| ||||||||||||||    ||||||| |||||||| ||||||| |||||||  |||| || ||    
T  5880 cttttgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatctttagcttctgatgaacttacttctgaagacgtcattactttagaag 5781  T
Q  194 cactt 198  Q
    |||||    
T  5780 cactt 5776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 9253 - 9189
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    ||||||||||||||||| |||||||| |||||||   ||| |||| || ||||||||||| ||||    
T  9253 tgcttctgatgacgtcatcacttcagaagcacttcagcttcaggagcagttttcttcagatgctt 9189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 146
Target Start/End: Complemental strand, 10120 - 9996
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaac-ttttgaagctttaagt--tgcatctcc 121  Q
    ||||||||||| ||||||   ||| ||| |||||||||||| | |||| |||| || ||||| |  |||||| ||||||||||||||||  |||||||||    
T  10120 tttcaaaatagtcgttgcttcactcttctagtcttctgcaaagcttagatgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcc 10021  T
Q  122 tgatgaactgcagcttctggtgatt 146  Q
    ||||||||| |||||||||||||||    
T  10020 tgatgaacttcagcttctggtgatt 9996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 13851 - 13938
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcac-tttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| |||||||||||||||||||| |||  ||||||||||||| |||||||| |||| || || ||||| ||||| |||||||||    
T  13851 gcttctgatgaacttgcttctgatgacatcattacttcaggagcacttttgtcttcaggagcacttctcttctgacgcattaagcttc 13938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 1759 - 1881
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctcct 122  Q
    ||||||||||| |||||    ||| ||| |||||||||||| | ||||  ||| |||||||| |  |||||| |||||||||||||||  ||||||||||    
T  1759 tttcaaaatagtcgttgtttcactcttctagtcttctgcaaagcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatctcct 1858  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    |||||||| ||||||||||||||    
T  1859 gatgaacttcagcttctggtgat 1881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 1868 - 1957
Alignment:
Q  149 cagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt-gtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||  ||| ||||||||||||||||||| ||||||||||||| ||| ||||| |||| || || ||| |||| ||||||||||||    
T  1868 cagcttctggtgatcttgcttctgatgacgtcatcacttcaggagcattttagtcttcaggagcacttctctgcagatgctttaagcttc 1957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 716 - 802
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||| || ||||||||||||||||||||| ||||||| ||||| |||| ||| | || || || |||||||| ||||||||||||    
T  716 gcttctgataaacttgcttctgatgacgtcatcacttcatgagcattttgacttcaagagcacttctcttcagatgctttaagcttc 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 6293 - 6355
Alignment:
Q  90 aaacaact-tttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacag 151  Q
    |||||||| |||||| ||||| ||||||||| || |||||||| ||||||||||||| |||||    
T  6293 aaacaactatttgaaactttaggttgcatcttctcatgaactgtagcttctggtgatacacag 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 15339 - 15412
Alignment:
Q  163 cttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||| |||| || || |||||||||||||||||||||    
T  15339 cttgcttctgatgacgtcatcacttcagaagcac-ttgacttcaggagcacttctcttcagacgctttaagcttc 15412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 20841 - 20763
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcagacgctt 229  Q
    |||||| ||||||||| |||||||||||||| ||||||||||||||| |  ||| |||| || || |||||||||||||    
T  20841 gcttctgatgaacttgtttctgatgacgtcatcacttcaggagcactattacttcaggagcacttctcttcagacgctt 20763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 20917 - 20845
Alignment:
Q  91 aacaacttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatga 161  Q
    |||||| |||||||||||||||  |||||||| ||||||||| || ||| |||||||   |||||||||||||    
T  20917 aacaacctttgaagctttaagtcttgcatctcttgatgaacttcaacttttggtgatcttcagcttctaatga 20845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 197
Target Start/End: Complemental strand, 60792 - 60708
Alignment:
Q  112 ttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggagcact 197  Q
    |||||||| |||||||||| |||||| |||||||   |||||||||||| |  ||||||||||||||||  |||||||||||||||    
T  60792 ttgcatcttctgatgaacttcagcttgtggtgatcttcagcttctaatg-agatgcttctgatgacgtcctcacttcaggagcact 60708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 74828 - 74869
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  74828 atgaacttgcttctgatgacgtcaacacttcaggagcacttt 74869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 199
Target Start/End: Original strand, 15965 - 16067
Alignment:
Q  96 cttttgaagctttaagt--tgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgatgacgtcaccacttcaggag 193  Q
    |||||||||||||||||  ||||||||||||||||||  |||||||| |||      | |||| ||||||||||||||||||| |||| ||||||| |||    
T  15965 cttttgaagctttaagtcttgcatctcctgatgaactttagcttctgatgagat---ggttctgatgaacttgcttctgatgatgtcatcacttcatgag 16061  T
Q  194 cacttt 199  Q
    ||||||    
T  16062 cacttt 16067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 9262 - 9215
Alignment:
Q  152 cttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    ||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  9262 cttctgatgaccttgcttctgatgacgtcatcacttcaggagcacttt 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 9329 - 9296
Alignment:
Q  112 ttgcatctcctgatgaactgcagcttctggtgat 145  Q
    ||||||||||||||||||| ||||||||||||||    
T  9329 ttgcatctcctgatgaacttcagcttctggtgat 9296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 25987 - 25865
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcct 122  Q
    ||||||||||| ||||||   |||||||||||||| ||||||| ||||  ||| || ||||| |  |||||| ||||| ||||||||  |||||||||||    
T  25987 tttcaaaatagtcgttgcttcacttttccagtcttttgcaatgcttagacgagattaaatccattgaacaacctttgacgctttaagtcttgcatctcct 25888  T
Q  123 gatgaactgcagcttctggtgat 145  Q
    ||||| ||  |||||||||||||    
T  25887 gatgagctttagcttctggtgat 25865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 25838 - 25798
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  25838 atgaacgtgcttctgatgacgtcatcacttcaggagcactt 25798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 43775 - 43728
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  43775 gcttctgatgaacttgcttctgatgacgtcatcacttcaagagcactt 43728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 143
Target Start/End: Original strand, 103669 - 103791
Alignment:
Q  24 catttcaaaatagccgttgccatacttttccagtcttctgcaatgtt-aggtgagtttgaatccttgaaacaacttttgaagctttaagt--tgcatctc 120  Q
    ||||||||||||||||||||   ||| |||||||||||||||||||| ||   |  || ||| | |  |||||| ||| |||||||||||  ||||||||    
T  103669 catttcaaaatagccgttgcttcactcttccagtcttctgcaatgtttagacaaaattaaattcatttaacaacctttcaagctttaagtcttgcatctc 103768  T
Q  121 ctgatgaactgcagcttctggtg 143  Q
    |||||||||| ||||||||||||    
T  103769 ctgatgaacttcagcttctggtg 103791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 1704 - 1652
Alignment:
Q  185 cttcaggagcactttgtctttaggaacaattttcttcagacgctttaagcttc 237  Q
    |||||||||| |||| |||| |||| || ||||||||||||||||||||||||    
T  1704 cttcaggagcgctttatcttcaggagcagttttcttcagacgctttaagcttc 1652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 12450 - 12498
Alignment:
Q  151 gcttctaatgaacttgcttctgatgacgtcaccacttcaggagcacttt 199  Q
    |||||| |||||||||||||||||||||||| ||  |||||||||||||    
T  12450 gcttctgatgaacttgcttctgatgacgtcatcagctcaggagcacttt 12498  T

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Target: scaffold0655 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 8714 - 8655
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||| | ||||||||||| |||| ||| |||| || |||||||||||    
T  8714 tgcttctgatgacgtcatctcttcaggagcagtttggcttcaggagcagttttcttcaga 8655  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 30323 - 30441
Alignment:
Q  26 tttcaaaatagccgttgccatacttttccagtcttctgcaatg-ttaggtgagtttgaatccttgaaacaacttttgaagctttaag--ttgcatctcct 122  Q
    ||||||||||| ||||||   ||| |||||||||||||||||| ||||  ||| |||||||  |  |||| | ||||||||||||||  |||||||||||    
T  30323 tttcaaaatagtcgttgcttcactcttccagtcttctgcaatgcttagacgagattgaatctattgaacatcctttgaagctttaagtcttgcatctcct 30422  T
Q  123 gatgaactgcagcttctgg 141  Q
    |||||| | || |||||||    
T  30423 gatgaattacaacttctgg 30441  T

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Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 10033 - 10162
Alignment:
Q  57 tcttctgcaatgttaggtgagtttgaatccttgaaacaacttttgaagctttaagttgc--atctcctgatgaactgcagcttctggtgattcacagctt 154  Q
    |||||||||||| |||  | | || |||||||  |||| | |||||||||||||||| |  |||| |||||||||| ||||||||||||||  |  ||||    
T  10033 tcttctgcaatgctagacgtgattaaatccttagaacagcctttgaagctttaagtttctcatcttctgatgaacttcagcttctggtgat--attgctt 10130  T
Q  155 ctaatgaacttgcttctgatgacgtcaccactt 187  Q
    |||||| |  ||||||||||||||||| |||||    
T  10131 ctaatg-aggtgcttctgatgacgtcatcactt 10162  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 408043 - 407984
Alignment:
Q  165 tgcttctgatgacgtcaccacttcaggagcactttgtctttaggaacaattttcttcaga 224  Q
    ||||||||||||||||| |||||||| |||||||   |||||||| || |||||||||||    
T  408043 tgcttctgatgacgtcatcacttcagaagcacttcagctttaggagcagttttcttcaga 407984  T

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Target: scaffold0280 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 2740 - 2702
Alignment:
Q  29 caaaatagccgttgccatacttttccagtcttctgcaat 67  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  2740 caaaatagtcgttgcaatacttttccagtcttctgcaat 2702  T

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Target: scaffold0132 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 38016 - 37947
Alignment:
Q  105 ctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctaatgaacttgcttctgat 174  Q
    ||||| ||||||||||||||||||||  || ||||||||||  ||||||||  ||||| | |||||||||    
T  38016 ctttaggttgcatctcctgatgaactatagtttctggtgatatacagcttccgatgaaatagcttctgat 37947  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 4856 - 4816
Alignment:
Q  158 atgaacttgcttctgatgacgtcaccacttcaggagcactt 198  Q
    |||||||||||| ||||||||| | ||||||||||||||||    
T  4856 atgaacttgcttttgatgacgttatcacttcaggagcactt 4816  T

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