View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9074_low_8 (Length: 552)
Name: NF9074_low_8
Description: NF9074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9074_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 507; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 507; E-Value: 0
Query Start/End: Original strand, 1 - 539
Target Start/End: Original strand, 32021264 - 32021802
Alignment:
| Q |
1 |
caaagaagaactcgtcggagcaaaagcaaagcaaaactttccggcagaatccaccgcaatcaagtaattcttcgccggcaaactccaaaccttattctca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32021264 |
caaagaagaactcgtcggagcaaaagcaaagcaaaactttccggcagaatccaccgcaatcaagtaattcttcgccggcaaactccaaaccttattctca |
32021363 |
T |
|
| Q |
101 |
ccaaaatgaaaagccacagttggaaccctaacactttgcaaattagacaaatcataacaagtatcaaacaaagcataattatcagcagaacgtaaattct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32021364 |
ccaaaatgaaaagccacagttggaaccctaacactttgtaaattagacaaatcataacaagtatcaaacaaagcaaaattatcagcagaacgtaaattct |
32021463 |
T |
|
| Q |
201 |
gagtcattcttttaaactcgtcgcgaaccgagttatagagttgactctgcaaccgcgttatagcggttccagagtcaacaataatcccaccacttccaga |
300 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
32021464 |
gagtcattcttttaaactcgtcgcgaaccgagttataaagttgactctgtaaccgcgttatcgcggttccagagtcaacaataatcccaccacttccaga |
32021563 |
T |
|
| Q |
301 |
accatctcccgccgccgccggaacagaaaccatctgcccaccaacactaataccagtgagctgaacataataaaacgtattaactctttgattctttaac |
400 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32021564 |
accatctcccgccgccgccggaacagaaaccatctgcccaccaacactaataccagtgagctgaacataataaaacgtattaactctttgattctttaac |
32021663 |
T |
|
| Q |
401 |
atcggagcaagtactgaatcactgggttgaaccgagttaaactcaagagttgacgattttcccgagtcacggtcaactaaacagtaagaaaacgatgaag |
500 |
Q |
| |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32021664 |
atcggagcaagtactgaatcagcgggttgaaccgagttaaactcaagagttgacgattttcccgagtcacggtcaactaaacagtaagaaaacgatgaag |
32021763 |
T |
|
| Q |
501 |
ctttgatctgtgaaattaaagattgcgacccaccaccaa |
539 |
Q |
| |
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|||||||||| |||||||||||||||||||||||||||| |
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| T |
32021764 |
ctttgatctgcgaaattaaagattgcgacccaccaccaa |
32021802 |
T |
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