View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF9075_low_11 (Length: 280)
Name: NF9075_low_11
Description: NF9075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF9075_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 9 - 264
Target Start/End: Complemental strand, 27310254 - 27309999
Alignment:
| Q |
9 |
tagattatacttgctcataagtattccatctacattggagattaagaagaagaaaagaagacataaattttagaatattgatgtagatttttattttaaa |
108 |
Q |
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| T |
27310254 |
tagataatacttgctcataagtattccatctacattggagattaagaagaagaaaagaagacataaattttagaatattgatgtagatttttattttaaa |
27310155 |
T |
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| Q |
109 |
tcctactattgtgtttccaagtttgcatagtgatattttatgaacttttgtgttttaaatttgtgtaactactttctttcttgggttgacttttgttgat |
208 |
Q |
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| T |
27310154 |
tcctactattgtgtttccaagtttgcatagtgatattttatgaacttttgagttttaaatttgtgtaactactttctttcttgggttgacttttgttgat |
27310055 |
T |
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| Q |
209 |
gtaatataagatattagtaaacgtttgatttgacattgatattgaatattttcttc |
264 |
Q |
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| T |
27310054 |
gtaatataagatattagtaaacgtttgatttgacattgatattgaatgttttcttc |
27309999 |
T |
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